CRANberries

An aggregation of new and and updated packages at the CRAN network for R
available as this html version and a corresponding RSS feed
created and provided by Dirk Eddelbuettel.

Tue, 29 Jan 2008

Package xts updated to version 0.0-6 with previous version 0.0-3 dated 2008-01-05
Diff between xts versions 0.0-3 dated 2008-01-05 and 0.0-6 dated 2008-01-29
 xts-0.0-3/xts/R/print.xts.R         |only
 xts-0.0-3/xts/R/timeformat.R        |only
 xts-0.0-6/xts/DESCRIPTION           |   12 +-
 xts-0.0-6/xts/NAMESPACE             |   86 ++++++++++++--
 xts-0.0-6/xts/R/OHLC.R              |only
 xts-0.0-6/xts/R/coredata.xts.R      |   29 +++++
 xts-0.0-6/xts/R/data.frame.R        |only
 xts-0.0-6/xts/R/endpoints.R         |   61 ++++------
 xts-0.0-6/xts/R/first.R             |only
 xts-0.0-6/xts/R/indexClass.R        |only
 xts-0.0-6/xts/R/irts.R              |only
 xts-0.0-6/xts/R/its.R               |only
 xts-0.0-6/xts/R/last.R              |only
 xts-0.0-6/xts/R/matrix.R            |only
 xts-0.0-6/xts/R/period.R            |only
 xts-0.0-6/xts/R/periodicity.R       |only
 xts-0.0-6/xts/R/timeSeries.R        |only
 xts-0.0-6/xts/R/toperiod.R          |only
 xts-0.0-6/xts/R/ts.R                |only
 xts-0.0-6/xts/R/xts.R               |  207 ++++++++----------------------------
 xts-0.0-6/xts/R/xts.methods.R       |only
 xts-0.0-6/xts/R/zoo.R               |only
 xts-0.0-6/xts/WISHLIST              |   72 +++++++-----
 xts-0.0-6/xts/man/CLASS.Rd          |only
 xts-0.0-6/xts/man/apply.monthly.Rd  |only
 xts-0.0-6/xts/man/as.xts.Rd         |   11 +
 xts-0.0-6/xts/man/as.xts.methods.Rd |only
 xts-0.0-6/xts/man/endpoints.Rd      |only
 xts-0.0-6/xts/man/first.Rd          |only
 xts-0.0-6/xts/man/indexClass.Rd     |only
 xts-0.0-6/xts/man/period.apply.Rd   |only
 xts-0.0-6/xts/man/periodicity.Rd    |only
 xts-0.0-6/xts/man/to.period.Rd      |only
 xts-0.0-6/xts/man/xts-package.Rd    |    6 -
 xts-0.0-6/xts/man/xts.Rd            |   51 ++++++--
 xts-0.0-6/xts/man/xtsAttributes.Rd  |only
 xts-0.0-6/xts/src                   |only
 xts-0.0-6/xts/tests/test.R          |   37 ++++++
 xts-0.0-6/xts/tests/test.Rout.save  |   56 +++++++--
 39 files changed, 353 insertions(+), 275 deletions(-)
More information about xts at CRAN
Path: /cran/updated | permanent link

New package robfilter with initial version 1.0
Package: robfilter
Version: 1.0
Date: 2008-01-28
Title: Robust Time Series Filters
Author: Roland Fried 
  and Karen Schettlinger .
Maintainer: XXX 
Depends: R (>= 2.5.0), robustbase, MASS
Description: A set of functions to filter time series based on
  concepts from robust statistics.
License: GPL (>=2)
URL: http://wwww.statistik.uni-dortmund.de/~fried/
LazyData: yes
Packaged: Tue Jan 29 12:38:56 2008; buecker

More information about robfilter at CRAN
Path: /cran/new | permanent link

Package mratios updated to version 1.3.3 with previous version 1.3.2 dated 2008-01-25
Diff between mratios versions 1.3.2 dated 2008-01-25 and 1.3.3 dated 2008-01-29
 DESCRIPTION |    6 +++---
 NAMESPACE   |    2 +-
 2 files changed, 4 insertions(+), 4 deletions(-)
More information about mratios at CRAN
Path: /cran/updated | permanent link

Package diveMove updated to version 0.9.0 with previous version 0.8.9 dated 2008-01-28
Diff between diveMove versions 0.8.9 dated 2008-01-28 and 0.9.0 dated 2008-01-29
 diveMove-0.8.9/diveMove/++psvn.state          |only
 diveMove-0.9.0/diveMove/ChangeLog             |    7 +++++++
 diveMove-0.9.0/diveMove/DESCRIPTION           |    4 ++--
 diveMove-0.9.0/diveMove/README                |    4 ++++
 diveMove-0.9.0/diveMove/inst/doc/Makefile     |   18 +++++++-----------
 diveMove-0.9.0/diveMove/inst/doc/diveMove.Rnw |    1 +
 diveMove-0.9.0/diveMove/inst/doc/diveMove.pdf |   24 +++++++++++-------------
 diveMove-0.9.0/diveMove/inst/doc/diveMove.tex |    1 +
 8 files changed, 33 insertions(+), 26 deletions(-)
More information about diveMove at CRAN
Path: /cran/updated | permanent link

New package DEA with initial version 0.1-1
Package: DEA
Type: Package
Title: Data Envelopment Analysis.
Version: 0.1-1
Date: 2008-01-29
Author: Zuleyka D{\'i}az-Mart{\'i}nez, Jos{\'e} Fern{\'a}ndez-Men{\'e}ndez.
Maintainer: Zuleyka D{\'i}az-Mart{\'i}nez 
Description: Performs some basic models of Data Envelopment Analysis, both in multiplier and envelopment form.
License: GPL (>=2).
Notes:  This work has been partially supported by \emph{Ministerio de Educaci{\'o}n y Ciencia} of Spain through "Jos{\'e} Castillejo" scholarship obtained by Zuleyka D{\'i}az-Mart{\'i}nez.\newline C code that performs the Simplex algorithm comes from the GNU Linear Programming Kit v. 4.8, available at \url{http://www.gnu.org/software/glpk/}. Many thanks to its author Andrew Makhorin \email{mao@gnu.org}. \newline According to the usual practice in statistics, in this package each row in the data matrices containing the inputs and outputs corresponds to an observation and each column to a variable. They are the transposed of X and Y matrices used in Cooper, W. W., Seiford, L. M. and Tone, K.  (2007): \emph{Data envelopment analysis: a comprehensive text with models, applications, references and DEA-solver software.} Second edition. Springer. New York.\newline This is a preliminar package. Any comments and suggestions are welcome.
Packaged: Tue Jan 29 16:15:04 2008; teresita

More information about DEA at CRAN
Path: /cran/new | permanent link

Package TIMP updated to version 1.5 with previous version 1.4 dated 2007-10-08
Diff between TIMP versions 1.4 dated 2007-10-08 and 1.5 dated 2008-01-29
 TIMP-1.4/TIMP/R/plotTraces.R                       |only
 TIMP-1.4/TIMP/R/removePrelBetweenDatasets.R        |only
 TIMP-1.4/TIMP/TIMP.Rcheck                          |only
 TIMP-1.4/TIMP/tests/0902.txt                       |only
 TIMP-1.4/TIMP/tests/1013.txt                       |only
 TIMP-1.4/TIMP/tests/124.txt                        |only
 TIMP-1.4/TIMP/tests/1402.txt                       |only
 TIMP-1.4/TIMP/tests/kin_simult_script.R            |only
 TIMP-1.5/TIMP/CHANGES                              |only
 TIMP-1.5/TIMP/DESCRIPTION                          |   13 
 TIMP-1.5/TIMP/NAMESPACE                            |   44 -
 TIMP-1.5/TIMP/R/addOutlierWeights.R                |only
 TIMP-1.5/TIMP/R/addPrel.R                          |    4 
 TIMP-1.5/TIMP/R/addPrelCl.R                        |   24 
 TIMP-1.5/TIMP/R/amp.R                              |only
 TIMP-1.5/TIMP/R/applyKinScalSpecialFun.R           |only
 TIMP-1.5/TIMP/R/applyWeightingModel.R              |   18 
 TIMP-1.5/TIMP/R/calcAniSignal.R                    |   22 
 TIMP-1.5/TIMP/R/calcB.R                            |    4 
 TIMP-1.5/TIMP/R/calcC.R                            |   12 
 TIMP-1.5/TIMP/R/calcCirf.R                         |   96 ++-
 TIMP-1.5/TIMP/R/calcEhiergaus.R                    |   45 -
 TIMP-1.5/TIMP/R/compCoh.R                          |  105 +--
 TIMP-1.5/TIMP/R/compModel.R                        |  133 ++--
 TIMP-1.5/TIMP/R/compModelMass.R                    |   59 +-
 TIMP-1.5/TIMP/R/convolveUnitStep.R                 |only
 TIMP-1.5/TIMP/R/displayEst.R                       |   46 -
 TIMP-1.5/TIMP/R/doConstrSuper.R                    |    3 
 TIMP-1.5/TIMP/R/fillK.R                            |   69 +-
 TIMP-1.5/TIMP/R/fillResult.R                       |  154 ++---
 TIMP-1.5/TIMP/R/fitModel.R                         |   55 +
 TIMP-1.5/TIMP/R/fullKF.R                           |   10 
 TIMP-1.5/TIMP/R/getAutoClp0.R                      |    4 
 TIMP-1.5/TIMP/R/getDiffThetaCl.R                   |    2 
 TIMP-1.5/TIMP/R/getGroups.R                        |    2 
 TIMP-1.5/TIMP/R/getKinConcen.R                     |  166 +++--
 TIMP-1.5/TIMP/R/getLightDiff.R                     |only
 TIMP-1.5/TIMP/R/getModel.R                         |    9 
 TIMP-1.5/TIMP/R/getResid.R                         |    3 
 TIMP-1.5/TIMP/R/getResidRet.R                      |   43 +
 TIMP-1.5/TIMP/R/getResults.R                       |only
 TIMP-1.5/TIMP/R/getSelectedTracesMax.R             |   39 -
 TIMP-1.5/TIMP/R/getStartTri.R                      |only
 TIMP-1.5/TIMP/R/getStdErrClp.R                     |only
 TIMP-1.5/TIMP/R/getStreakBacksweep.R               |only
 TIMP-1.5/TIMP/R/getXList.R                         |only
 TIMP-1.5/TIMP/R/init.dat.R                         |   40 -
 TIMP-1.5/TIMP/R/init.multimodel.R                  |   24 
 TIMP-1.5/TIMP/R/init.opt.R                         |  107 ++-
 TIMP-1.5/TIMP/R/init.theta.R                       |    5 
 TIMP-1.5/TIMP/R/initModel.R                        |    8 
 TIMP-1.5/TIMP/R/initOneModel.R                     |    4 
 TIMP-1.5/TIMP/R/irfparF.R                          |    4 
 TIMP-1.5/TIMP/R/l2nu.R                             |    2 
 TIMP-1.5/TIMP/R/linlogtics.R                       |only
 TIMP-1.5/TIMP/R/modifyModel.R                      |only
 TIMP-1.5/TIMP/R/multiLin.R                         |    6 
 TIMP-1.5/TIMP/R/normdat.R                          |    8 
 TIMP-1.5/TIMP/R/outlierCorr.R                      |only
 TIMP-1.5/TIMP/R/plotClp.R                          |  295 +++++-----
 TIMP-1.5/TIMP/R/plotEst.R                          |    7 
 TIMP-1.5/TIMP/R/plotFLIM.R                         |   46 -
 TIMP-1.5/TIMP/R/plotFLIMresid.R                    |   45 -
 TIMP-1.5/TIMP/R/plotKinBreakDown.R                 |  153 ++---
 TIMP-1.5/TIMP/R/plotKinSpecEst.R                   |    3 
 TIMP-1.5/TIMP/R/plotMassSpec.R                     |  211 +++----
 TIMP-1.5/TIMP/R/plotResids.R                       |  161 ++---
 TIMP-1.5/TIMP/R/plotSpecKin.R                      |    2 
 TIMP-1.5/TIMP/R/plotTracesSuper.R                  |  194 +++---
 TIMP-1.5/TIMP/R/plotTri.R                          |only
 TIMP-1.5/TIMP/R/preProcess.R                       |   64 +-
 TIMP-1.5/TIMP/R/readData.R                         |   24 
 TIMP-1.5/TIMP/R/rescomp.R                          |   46 -
 TIMP-1.5/TIMP/R/set_getClpindepX_amp.R             |only
 TIMP-1.5/TIMP/R/set_getClpindepX_kin.R             |    9 
 TIMP-1.5/TIMP/R/set_initModelClass_amp.R           |only
 TIMP-1.5/TIMP/R/set_initModelClass_kin.R           |    2 
 TIMP-1.5/TIMP/R/set_initModelClass_mass.R          |    5 
 TIMP-1.5/TIMP/R/set_plotter_kin.R                  |  618 ++++++++++-----------
 TIMP-1.5/TIMP/R/set_plotter_mass.R                 |  361 ++++++------
 TIMP-1.5/TIMP/R/set_plotter_spec.R                 |  296 ++++------
 TIMP-1.5/TIMP/R/set_residPart_amp.R                |only
 TIMP-1.5/TIMP/R/set_residPart_kin.R                |   29 
 TIMP-1.5/TIMP/R/set_residPart_mass.R               |   62 +-
 TIMP-1.5/TIMP/R/simndecay_gen.R                    |   39 -
 TIMP-1.5/TIMP/R/sumKinSpecEst.R                    |   96 +--
 TIMP-1.5/TIMP/R/triResolve.R                       |only
 TIMP-1.5/TIMP/R/unitstep.R                         |only
 TIMP-1.5/TIMP/R/weightPsi.R                        |    5 
 TIMP-1.5/TIMP/R/weightSM.R                         |only
 TIMP-1.5/TIMP/R/writeEst.R                         |    6 
 TIMP-1.5/TIMP/Rplots.ps                            |only
 TIMP-1.5/TIMP/inst/CITATION                        |    4 
 TIMP-1.5/TIMP/man/TIMP-package.Rd                  |   47 -
 TIMP-1.5/TIMP/man/amp-class.Rd                     |only
 TIMP-1.5/TIMP/man/fitModel.Rd                      |   11 
 TIMP-1.5/TIMP/man/getClpindepX.Rd                  |    1 
 TIMP-1.5/TIMP/man/getResults.Rd                    |only
 TIMP-1.5/TIMP/man/internals.Rd                     |    6 
 TIMP-1.5/TIMP/man/kin-class.Rd                     |   52 +
 TIMP-1.5/TIMP/man/mass-class.Rd                    |   16 
 TIMP-1.5/TIMP/man/modifyModel.Rd                   |only
 TIMP-1.5/TIMP/man/opt-class.Rd                     |   35 +
 TIMP-1.5/TIMP/man/outlierCorr.Rd                   |only
 TIMP-1.5/TIMP/man/readData.Rd                      |    5 
 TIMP-1.5/TIMP/man/residPart.Rd                     |    1 
 TIMP-1.5/TIMP/tests/25_650-75_2700.txt             |only
 TIMP-1.5/TIMP/tests/4_6_uw0                        |only
 TIMP-1.5/TIMP/tests/6966_10_11.ivom                |only
 TIMP-1.5/TIMP/tests/C015_016.ivom                  |only
 TIMP-1.5/TIMP/tests/C017_018.ivom                  |only
 TIMP-1.5/TIMP/tests/_paramEst.txt                  |only
 TIMP-1.5/TIMP/tests/_selectedtraces.ps             |only
 TIMP-1.5/TIMP/tests/_summary.ps                    |only
 TIMP-1.5/TIMP/tests/nnls_example.R                 |only
 TIMP-1.5/TIMP/tests/num_conv_FLIM_script.R         |only
 TIMP-1.5/TIMP/tests/sim1.txt                       |only
 TIMP-1.5/TIMP/tests/target_with_data_correction.Rt |only
 TIMP-1.5/TIMP/tests/xtoh_256.txt                   |only
 119 files changed, 2345 insertions(+), 2004 deletions(-)
More information about TIMP at CRAN
Path: /cran/updated | permanent link

Package Rcapture updated to version 1.1 with previous version 1.0 dated 2007-05-03
Diff between Rcapture versions 1.0 dated 2007-05-03 and 1.1 dated 2008-01-29
 DESCRIPTION             |   10 +-
 R/Xclosedp.r            |   22 +++---
 R/Xomega.0.R            |   16 ++--
 R/Xomega.t.r            |   36 +++++-----
 R/Zdelta.R              |    4 -
 R/closedp.Mtb.R         |   16 ++--
 R/closedp.R             |   99 +++++++++++++++++------------
 R/closedp.bc.R          |   50 +++++++++-----
 R/closedp.h.r           |   30 ++++----
 R/closedp.mX.R          |   20 ++---
 R/descriptive.R         |   34 +++++-----
 R/histfreq.0.R          |   33 +++++----
 R/histfreq.t.R          |   12 +--
 R/histpos.0.R           |    2 
 R/histpos.t.R           |    4 -
 R/openp.R               |  156 +++++++++++++++++++++++-----------------------
 R/periodhist.R          |   34 +++++-----
 R/profileCI.R           |   68 +++++++++-----------
 R/robustd.0.R           |  135 ++++++++++++++++++++--------------------
 R/robustd.t.r           |  161 ++++++++++++++++++++++++------------------------
 R/uifit.R               |   50 +++++++-------
 man/HIV.Rd              |    2 
 man/Rcapture.package.Rd |   13 ++-
 man/bunting.Rd          |    2 
 man/closedp.Mtb.Rd      |    5 -
 man/closedp.Rd          |    7 +-
 man/closedp.bc.Rd       |    5 -
 man/closedp.custom.Rd   |    9 +-
 man/descriptive.Rd      |    7 +-
 man/duck.Rd             |    2 
 man/hare.Rd             |    2 
 man/histfreq.Rd         |    5 -
 man/histpos.Rd          |    5 -
 man/model.matrices.Rd   |    3 
 man/mvole.Rd            |   16 ++--
 man/openp.Rd            |    5 -
 man/periodhist.Rd       |    5 -
 man/profileCI.Rd        |    5 -
 man/robustd.Rd          |    5 -
 man/uifit.Rd            |    5 -
 40 files changed, 575 insertions(+), 525 deletions(-)
More information about Rcapture at CRAN
Path: /cran/updated | permanent link

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