Author: Michael Lawrence
Title: Cairo-based cross-platform antialiased graphics device driver.
Description: Cairo/GTK graphics device driver with output to screen,
file (png, svg, pdf, and ps) or memory (GdkDrawable). The screen device
may be embedded into RGtk2 interfaces. Supports all interactive features
of other graphics devices, including getGraphicsEvent().
Diff between cairoDevice versions 2.8 dated 2008-05-03 and 2.6.1 dated 2008-05-03
cairoDevice-2.6.1/cairoDevice/DESCRIPTION | 11 ++--- cairoDevice-2.6.1/cairoDevice/src/cairoDevice.c | 39 +++++++++++++-------- cairoDevice-2.8/cairoDevice/src/Makevars |only cairoDevice-2.8/cairoDevice/src/cairoDevice.h.orig |only cairoDevice-2.8/cairoDevice/src/cairoDevice.h.rej |only 5 files changed, 30 insertions(+), 20 deletions(-)
Author: Marek Walesiak
Diff between clusterSim versions 0.34-3 dated 2008-04-04 and 0.36-1 dated 2008-05-03
Title: Searching for optimal clustering procedure for a data set
Description: GDM Distance,
Sokal-Michener Distance,
Bray-Curtis Distance,
Calinski-Harabasz Index,
G2 Index,
G3 Index,
Silhouette Index,
Krzanowski-Lai Index,
Hartigan Index,
Gap Index,
DB Index,
Data Normalization,
HINoV method,
Replication analysis for cluster validation,
Clustering with several algorithms, distances, normalizations and icq indices,
Symbolic interval distances,
Plot functions,
Random cluster generation
DESCRIPTION | 6
R/dist.Symbolic.r | 105 +
R/index.DB.r | 46
R/index.G1.r | 63
R/index.GAP.r | 29
R/index.H.r | 33
R/index.KL.r | 50
R/reszta.r | 151 --
inst/pdf/HINoVMod_details.pdf | 959 +++++---------
inst/pdf/HINoVSymbolic_details.pdf | 338 ++---
inst/pdf/IndexGap_details.pdf |binary
inst/pdf/clusterGen_details.pdf | 2124 +++++++--------------------------
inst/pdf/clusterSim_details.pdf |binary
inst/pdf/dataNormalization_details.pdf |binary
inst/pdf/distBC_details.pdf |binary
inst/pdf/distGDM_details.pdf |binary
inst/pdf/distSM_details.pdf |binary
inst/pdf/distSymbolic_details.pdf |binary
inst/pdf/indexDB_details.pdf | 1303 +++++---------------
inst/pdf/indexG1_details.pdf | 1019 ++++++++-------
inst/pdf/indexG2_details.pdf |binary
inst/pdf/indexG3_details.pdf |binary
inst/pdf/indexH_details.pdf |binary
inst/pdf/indexKL_details.pdf |binary
inst/pdf/indexS_details.pdf |binary
inst/pdf/replicationMod_details.pdf |binary
man/HINoV.Mod.rd | 19
man/HINoV.Symbolic.rd | 10
man/cluster.Description.rd | 8
man/cluster.Gen.rd | 7
man/cluster.Sim.rd | 8
man/data.Normalization.rd | 15
man/data_mixed.rd | 2
man/data_ratio.rd | 4
man/data_symbolic.rd | 3
man/dist.BC.rd | 9
man/dist.GDM.rd | 13
man/dist.SM.rd | 4
man/dist.Symbolic.rd | 12
man/index.DB.rd | 58
man/index.G1.rd | 56
man/index.G2.rd | 28
man/index.G3.rd | 29
man/index.GAP.rd | 85 -
man/index.H.rd | 92 +
man/index.KL.rd | 63
man/index.S.rd | 30
man/initial.Centers.rd | 5
man/plotCategorial.rd | 12
man/plotCategorial3d.rd | 18
man/plotInterval.rd | 15
man/replication.Mod.rd | 10
52 files changed, 2615 insertions(+), 4226 deletions(-)
Author: Allan Strand
Diff between rmetasim versions 1.1.02 dated 2007-11-24 and 1.1.05 dated 2008-05-03
Title: An individual-based population genetic simulation environment
Description: An interface between R and the metasim simulation engine.
Facilitates the use of the metasim engine to build and
run individual based population genetics simulations. The
simulation environment is documented in: Allan
Strand. Metasim 1.0: an individual-based environment for
simulating population genetics of complex population
dynamics. Mol. Ecol. Notes, 2:373-376, 2002. (Please
contact Allan Strand with comments, bug reports, etc).
This version represents a significant alteration of
function names that hopefully increases consistency and
reduces the chances of collisions with other packages
naming conventions. For a spatially-explicit, but slower, package
with a similar interface, see kernelPop
rmetasim-1.1.02/rmetasim/R/coal2rmet.R |only
rmetasim-1.1.05/rmetasim/CHANGELOG | 4
rmetasim-1.1.05/rmetasim/DESCRIPTION | 4
rmetasim-1.1.05/rmetasim/NAMESPACE | 3
rmetasim-1.1.05/rmetasim/R/amova.R |only
rmetasim-1.1.05/rmetasim/R/landscape.sample.R |only
rmetasim-1.1.05/rmetasim/R/simcoal.R | 211 +++++++--------
rmetasim-1.1.05/rmetasim/man/landscape.amova.Rd |only
rmetasim-1.1.05/rmetasim/man/landscape.amova.locus.Rd |only
rmetasim-1.1.05/rmetasim/man/landscape.amova.pairwise.Rd |only
rmetasim-1.1.05/rmetasim/man/landscape.sample.Rd |only
11 files changed, 113 insertions(+), 109 deletions(-)
Author: Manuel Morales
Diff between sciplot versions 1.0-1 dated 2008-02-16 and 1.0-2 dated 2008-05-03
Title: Scientific Graphing Functions for Factorial Designs
Description: A collection of functions that creates graphs with error
bars for data collected from one-way or higher factorial
designs.
CHANGELOG | 1 +
DESCRIPTION | 8 ++++----
R/lineplot.CI.R | 2 +-
man/bargraph.CI.Rd | 6 +++---
man/lineplot.CI.Rd | 4 ++--
5 files changed, 11 insertions(+), 10 deletions(-)
Author: Deepayan Sarkar
Diff between lattice versions 0.17-6 dated 2008-02-16 and 0.17-7 dated 2008-05-03
Title: Lattice Graphics
Description: Implementation of Trellis Graphics. See ?Lattice for a
brief introduction
lattice-0.17-6/lattice/inst |only
lattice-0.17-7/lattice/DESCRIPTION | 6 +-
lattice-0.17-7/lattice/NAMESPACE | 1
lattice-0.17-7/lattice/NEWS |only
lattice-0.17-7/lattice/R/bwplot.R | 25 +++++-----
lattice-0.17-7/lattice/R/interaction.R | 12 +++-
lattice-0.17-7/lattice/R/panels.R | 6 +-
lattice-0.17-7/lattice/SvnLog | 64 ++++++++++++++++++++++++++
lattice-0.17-7/lattice/man/Lattice.Rd | 45 +++++++++---------
lattice-0.17-7/lattice/man/cloud.Rd | 5 ++
lattice-0.17-7/lattice/man/histogram.Rd | 5 ++
lattice-0.17-7/lattice/man/interaction.Rd | 8 ++-
lattice-0.17-7/lattice/man/levelplot.Rd | 6 ++
lattice-0.17-7/lattice/man/make.groups.Rd | 2
lattice-0.17-7/lattice/man/panel.barchart.Rd | 6 ++
lattice-0.17-7/lattice/man/panel.bwplot.Rd | 7 ++
lattice-0.17-7/lattice/man/panel.functions.Rd | 11 ++--
lattice-0.17-7/lattice/man/panel.violin.Rd | 9 ++-
lattice-0.17-7/lattice/man/trellis.device.Rd | 5 ++
lattice-0.17-7/lattice/man/xyplot.Rd | 6 ++
lattice-0.17-7/lattice/po/R-lattice.pot | 2
21 files changed, 176 insertions(+), 55 deletions(-)