Author: Tom Price
Diff between titan versions 1.0-13 dated 2006-11-23 and 1.0-14 dated 2008-05-25
Title: Titration analysis for mass spectrometry data
Description: GUI to analyze mass spectrometric data on the relative
abundance of two substances from a titration series.
Changes |only
DESCRIPTION | 14
R/titan.R | 6980 ++++++++++++++++++++++++++++++------------------------------
3 files changed, 3498 insertions(+), 3496 deletions(-)
Author: Gene Hunt
Diff between paleoTS versions 0.2-1 dated 2007-10-11 and 0.3-1 dated 2008-05-25
Title: Modeling evolution in paleontological time-series
Description: This package facilitates analysis of paleontological sequences of trait values from an evolving lineage. Functions are provided to fit, using maximum likelihood, evolutionary models including unbiased random walks, directional evolution, stasis, and Ornstein-Uhlenbeck models. Newly added to this version (0.3-1) are functions to analyze punctuations and models in which evolutionary dynamics change over the course of a time-series of trait values.
paleoTS-0.2-1/paleoTS/Read-and-delete-me |only
paleoTS-0.3-1/paleoTS/DESCRIPTION | 10 ++---
paleoTS-0.3-1/paleoTS/R/add.OU.curves.R |only
paleoTS-0.3-1/paleoTS/R/cat.paleoTS.R |only
paleoTS-0.3-1/paleoTS/R/fit.sgs.R |only
paleoTS-0.3-1/paleoTS/R/fit3models.joint.R |only
paleoTS-0.3-1/paleoTS/R/fitGpunc.R |only
paleoTS-0.3-1/paleoTS/R/logL.GRW.R | 3 +
paleoTS-0.3-1/paleoTS/R/logL.Stasis.R | 5 +-
paleoTS-0.3-1/paleoTS/R/logL.URW.R | 3 +
paleoTS-0.3-1/paleoTS/R/logL.joint.GRW.R |only
paleoTS-0.3-1/paleoTS/R/logL.joint.OU.R |only
paleoTS-0.3-1/paleoTS/R/logL.joint.Stasis.R |only
paleoTS-0.3-1/paleoTS/R/logL.joint.URW.R |only
paleoTS-0.3-1/paleoTS/R/logL.punc.R |only
paleoTS-0.3-1/paleoTS/R/logL.punc.omega.R |only
paleoTS-0.3-1/paleoTS/R/logL.sgs.R |only
paleoTS-0.3-1/paleoTS/R/logL.sgs.omega.R |only
paleoTS-0.3-1/paleoTS/R/opt.GRW.R | 2 -
paleoTS-0.3-1/paleoTS/R/opt.GRW.shift.R |only
paleoTS-0.3-1/paleoTS/R/opt.RW.Mult.R | 2 -
paleoTS-0.3-1/paleoTS/R/opt.RW.SameMs.R | 2 -
paleoTS-0.3-1/paleoTS/R/opt.RW.SameVs.R | 2 -
paleoTS-0.3-1/paleoTS/R/opt.Stasis.R | 2 -
paleoTS-0.3-1/paleoTS/R/opt.joint.GRW.R |only
paleoTS-0.3-1/paleoTS/R/opt.joint.OU.R |only
paleoTS-0.3-1/paleoTS/R/opt.joint.Stasis.R |only
paleoTS-0.3-1/paleoTS/R/opt.joint.URW.R |only
paleoTS-0.3-1/paleoTS/R/opt.punc.R |only
paleoTS-0.3-1/paleoTS/R/opt.sgs.R |only
paleoTS-0.3-1/paleoTS/R/ou.M.R |only
paleoTS-0.3-1/paleoTS/R/ou.V.R |only
paleoTS-0.3-1/paleoTS/R/plot.paleoTS.R | 9 +----
paleoTS-0.3-1/paleoTS/R/shift2gg.R |only
paleoTS-0.3-1/paleoTS/R/shifts.R |only
paleoTS-0.3-1/paleoTS/R/sim.GRW.shift.R |only
paleoTS-0.3-1/paleoTS/R/sim.OU.R |only
paleoTS-0.3-1/paleoTS/R/sim.punc.R |only
paleoTS-0.3-1/paleoTS/R/sim.sgs.R |only
paleoTS-0.3-1/paleoTS/R/split4punc.R |only
paleoTS-0.3-1/paleoTS/data |only
paleoTS-0.3-1/paleoTS/man/IC.Rd | 10 +++--
paleoTS-0.3-1/paleoTS/man/add.OU.curves.Rd |only
paleoTS-0.3-1/paleoTS/man/cat.paleoTS.Rd |only
paleoTS-0.3-1/paleoTS/man/dorsal.spines.Rd |only
paleoTS-0.3-1/paleoTS/man/fit.sgs.Rd |only
paleoTS-0.3-1/paleoTS/man/fit3models.Rd | 48 +++++++++++++++++++++------
paleoTS-0.3-1/paleoTS/man/fitGpunc.Rd |only
paleoTS-0.3-1/paleoTS/man/ln.paleoTS.Rd | 2 -
paleoTS-0.3-1/paleoTS/man/logL.joint.GRW.Rd |only
paleoTS-0.3-1/paleoTS/man/opt.GRW.Rd | 2 -
paleoTS-0.3-1/paleoTS/man/opt.GRW.shift.Rd |only
paleoTS-0.3-1/paleoTS/man/opt.joint.GRW.Rd |only
paleoTS-0.3-1/paleoTS/man/paleoTS-package.Rd | 15 ++++++--
paleoTS-0.3-1/paleoTS/man/pelvic.score.Rd |only
paleoTS-0.3-1/paleoTS/man/plot.paleoTS.Rd | 8 ++--
paleoTS-0.3-1/paleoTS/man/pterygiophores.Rd |only
paleoTS-0.3-1/paleoTS/man/sim.OU.Rd |only
paleoTS-0.3-1/paleoTS/man/sim.punc.Rd |only
paleoTS-0.3-1/paleoTS/man/sub.paleoTS.Rd | 2 -
60 files changed, 84 insertions(+), 43 deletions(-)
Author: Timur V. Elzhov, Katharine M. Mullen
Title: R interface to the Levenberg-Marquardt nonlinear least-squares algorithm found in MINPACK
Description: Provides R interface to lmder and lmdif from the MINPACK library, for solving nonlinear least-squares problems by a modification of the Levenberg-Marquardt algorithm.
Diff between minpack.lm versions 1.1-0 dated 2008-05-16 and 1.1-1 dated 2008-05-25
DESCRIPTION | 4 ++-- src/nls_lm.c | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-)
Author: Nicholas J. Lewin-Koh and Roger Bivand, contributions by Edzer J. Pebesma, Eric Archer, Stéphane Dray, David Forrest, Patrick Giraudoux, Duncan Golicher, Virgilio Gómez Rubio, Patrick Hausmann, Thomas Jagger, Sebastian P. Luque, Don MacQueen, Andrew Niccolai and Tom Short
Title: Tools for reading and handling spatial objects
Description: Set of tools for manipulating and reading geographic data, in particular ESRI shapefiles; C code used from shapelib. It includes binary access to GSHHS shoreline files. The package also provides interface wrappers for exchanging spatial objects with packages such as PBSmapping, spatstat, maps, RArcInfo, Stata tmap, WinBUGS, Mondrian, and others.
Diff between maptools versions 0.7-12 dated 2008-04-15 and 0.7-13 dated 2008-05-25
ChangeLog | 14 +++++ DESCRIPTION | 24 +++++----- INDEX | 106 ++++++++++++++++++++++----------------------- R/Rgshhs.R | 55 ++++++++++++++--------- R/sp2pbs.R | 8 +-- inst/ChangeLog | 14 +++++ inst/share/gshhs_c.b |binary inst/share/wdb_borders_c.b |only man/Rgshhs.Rd | 19 +++++--- src/Rgshhs.c | 32 ++++++++----- src/Rgshhs.h | 16 +++++- 11 files changed, 176 insertions(+), 112 deletions(-)
Author: Dan Rabosky
Title: Likelihood Analysis of Speciation/Extinction Rates from Phylogenies
Description: laser implements maximum likelihood methods based on the birth-death
process to test whether diversification rates have changed over time and whether rates vary among lineages.
Diff between laser versions 1.0 dated 2006-07-10 and 2.1 dated 2008-05-25
laser-1.0/laser/R/DensityDependent.R |only laser-1.0/laser/R/fitdAICrc.batch.R |only laser-1.0/laser/R/gamStat.batch.R |only laser-1.0/laser/R/laser-internals.R |only laser-1.0/laser/R/yule-n-rate.R |only laser-1.0/laser/inst |only laser-1.0/laser/man/fitdAICrc.batch.Rd |only laser-1.0/laser/man/gamStat.batch.Rd |only laser-1.0/laser/man/laser.package.Rd |only laser-2.1/laser/DESCRIPTION | 28 +- laser-2.1/laser/NAMESPACE |only laser-2.1/laser/R/DDL.R |only laser-2.1/laser/R/DDX.R |only laser-2.1/laser/R/IDDL.R |only laser-2.1/laser/R/IDDX.R |only laser-2.1/laser/R/Ibd.R |only laser-2.1/laser/R/IpureBirth.R |only laser-2.1/laser/R/Irvbd.R |only laser-2.1/laser/R/Iyule2rate.R |only laser-2.1/laser/R/Iyule3rate.R |only laser-2.1/laser/R/bd.R | 94 ++++----- laser-2.1/laser/R/calcLHbd.R | 34 +-- laser-2.1/laser/R/checkbasal.R |only laser-2.1/laser/R/combinations.R |only laser-2.1/laser/R/fitBOTHVAR.R |only laser-2.1/laser/R/fitEXVAR.R |only laser-2.1/laser/R/fitNDR_1rate.R |only laser-2.1/laser/R/fitNDR_2rate.R |only laser-2.1/laser/R/fitSPVAR.R |only laser-2.1/laser/R/fitdAICrc.R | 223 +++++++++++----------- laser-2.1/laser/R/gamStat.R | 52 ++--- laser-2.1/laser/R/getBtimes.R | 34 +-- laser-2.1/laser/R/getBtimes.batch.R | 80 ++------ laser-2.1/laser/R/getLambda.internal.R |only laser-2.1/laser/R/getLikelihood.BOTHVAR.R |only laser-2.1/laser/R/getLikelihood.EXVAR.R |only laser-2.1/laser/R/getLikelihood.SPVAR.R |only laser-2.1/laser/R/getSpeciationtimes.R |only laser-2.1/laser/R/getTipdata.R |only laser-2.1/laser/R/gsr.R |only laser-2.1/laser/R/lambda.crown.ms01.R |only laser-2.1/laser/R/lambda.stem.ci.R |only laser-2.1/laser/R/lambda.stem.ms01.R |only laser-2.1/laser/R/lambdaFx.R |only laser-2.1/laser/R/lamda.stem.ml.R |only laser-2.1/laser/R/mccrTest.R |only laser-2.1/laser/R/muFx.R |only laser-2.1/laser/R/node.sons.R |only laser-2.1/laser/R/pTt.BOTHVAR.R |only laser-2.1/laser/R/pTt.EXVAR.R |only laser-2.1/laser/R/pTt.SPVAR.R |only laser-2.1/laser/R/plotLtt.R | 28 +- laser-2.1/laser/R/plotNodeNumbers.phylo.R |only laser-2.1/laser/R/plotRate.R |only laser-2.1/laser/R/pureBirth.R | 38 +-- laser-2.1/laser/R/rhoFxn.BOTHVAR.R |only laser-2.1/laser/R/rhoFxn.EXVAR.R |only laser-2.1/laser/R/rhoFxn.SPVAR.R |only laser-2.1/laser/R/rvbd.R | 181 ++++++++---------- laser-2.1/laser/R/scaleBranchingtimes.R | 25 -- laser-2.1/laser/R/splitEdgeMatrix.R |only laser-2.1/laser/R/truncateTree.R | 110 +++++------ laser-2.1/laser/R/yule2rate.R |only laser-2.1/laser/R/yule3rate.R |only laser-2.1/laser/R/yule4rate.R |only laser-2.1/laser/R/yule5rate.R |only laser-2.1/laser/R/yuleSim.R | 44 ++-- laser-2.1/laser/R/yuleWindow.R | 59 ++---- laser-2.1/laser/R/yuleint2.R |only laser-2.1/laser/data/skinkdiversity.R |only laser-2.1/laser/data/skinkdiversity.txt |only laser-2.1/laser/data/skinktree.R |only laser-2.1/laser/data/skinktree.tre |only laser-2.1/laser/data/warblers.R |only laser-2.1/laser/data/warblers.txt |only laser-2.1/laser/man/DensityDependent.Rd | 110 +++++------ laser-2.1/laser/man/RandomTrees.Rd | 45 ++-- laser-2.1/laser/man/agamids.Rd | 54 ++--- laser-2.1/laser/man/bd.Rd | 110 +++++------ laser-2.1/laser/man/calcLHbd.Rd | 126 ++++++------ laser-2.1/laser/man/fitContinuousBirthDeath.Rd |only laser-2.1/laser/man/fitNDR_1rate.Rd |only laser-2.1/laser/man/fitNDR_2rate.Rd |only laser-2.1/laser/man/fitdAICrc.Rd | 224 +++++++++------------- laser-2.1/laser/man/gamStat.Rd | 64 +++--- laser-2.1/laser/man/getBtimes.Rd | 105 +++++----- laser-2.1/laser/man/getBtimes.batch.Rd | 178 ++++++++---------- laser-2.1/laser/man/getTipData.Rd |only laser-2.1/laser/man/laser-internals.Rd | 72 ++++--- laser-2.1/laser/man/laser-package.Rd |only laser-2.1/laser/man/magsand.Rd |only laser-2.1/laser/man/mccrTest.Rd |only laser-2.1/laser/man/plotLtt.Rd | 58 ++--- laser-2.1/laser/man/plotNodeNumbers.phylo.Rd |only laser-2.1/laser/man/plotRate.Rd |only laser-2.1/laser/man/pureBirth.Rd | 76 +++---- laser-2.1/laser/man/rvbd.Rd | 194 +++++++++---------- laser-2.1/laser/man/scaleBranchingtimes.Rd | 80 ++++---- laser-2.1/laser/man/skinkdiversity.Rd |only laser-2.1/laser/man/skinktree.Rd |only laser-2.1/laser/man/truncateTree.Rd | 102 +++++----- laser-2.1/laser/man/warblers.Rd |only laser-2.1/laser/man/yule-n-rate.Rd | 244 ++++++++++++------------- laser-2.1/laser/man/yuleSim.Rd | 58 ++--- laser-2.1/laser/man/yuleWindow.Rd | 126 ++++++------ 105 files changed, 1462 insertions(+), 1594 deletions(-)
Author: Patrick Mair, Reinhold Hatzinger
Title: Extended Rasch Modeling.
Description: eRm fits Rasch models (RM), linear logistic test models (LLTM), rating scale model (RSM), linear rating scale models (LRSM), partial credit models (PCM), and linear partial credit models (LPCM). Missing values are allowed in the data matrix. Additional features are the estimation of the person parameters, LR-Model test, item-specific Wald test, itemfit and personfit statistics, various ICC plots. An eRm platform is provided at http://r-forge.r-project.org/projects/erm/.
Diff between eRm versions 0.9-7 dated 2008-04-02 and 0.9-8.2 dated 2008-05-25
eRm-0.9-7/eRm/inst/doc/Rplots.ps |only eRm-0.9-8.2/eRm/DESCRIPTION | 8 +-- eRm-0.9-8.2/eRm/R/LRtest.Rm.R | 31 ++++++++++- eRm-0.9-8.2/eRm/R/Waldtest.Rm.R | 22 +++++++- eRm-0.9-8.2/eRm/R/itemfit.ppar.R | 2 eRm-0.9-8.2/eRm/R/person.parameter.eRm.R | 82 ++++++++++++++++++++++--------- eRm-0.9-8.2/eRm/R/personfit.ppar.R | 5 + eRm-0.9-8.2/eRm/R/pifit.internal.r | 2 eRm-0.9-8.2/eRm/R/plot.ppar.r | 3 - eRm-0.9-8.2/eRm/R/plotGOF.LR.R | 6 +- eRm-0.9-8.2/eRm/R/plotICC.Rm.R | 12 +--- eRm-0.9-8.2/eRm/R/plotjointICC.dRm.R | 2 eRm-0.9-8.2/eRm/R/pmat.ppar.R | 35 ++++++++----- eRm-0.9-8.2/eRm/R/print.ICr.r | 10 +-- eRm-0.9-8.2/eRm/R/print.eRm.R | 1 eRm-0.9-8.2/eRm/R/print.ifit.R | 1 eRm-0.9-8.2/eRm/R/print.pfit.R | 1 eRm-0.9-8.2/eRm/R/print.ppar.R | 28 +++++----- eRm-0.9-8.2/eRm/R/print.threshold.r | 1 eRm-0.9-8.2/eRm/R/print.wald.R | 1 eRm-0.9-8.2/eRm/R/summary.LR.r | 10 +-- eRm-0.9-8.2/eRm/R/summary.eRm.R | 6 +- eRm-0.9-8.2/eRm/inst/doc/eRmvig.pdf |binary eRm-0.9-8.2/eRm/man/LRtest.Rd | 10 ++- eRm-0.9-8.2/eRm/man/Waldtest.Rd | 5 + eRm-0.9-8.2/eRm/man/eRm-package.Rd | 4 - eRm-0.9-8.2/eRm/man/person.parameter.Rd | 7 +- 27 files changed, 203 insertions(+), 92 deletions(-)
Author: Andy Bunn
Title: Dendrochronology Program Library in R
Description: This package contains functions for performing some standard tree-ring analyses.
Diff between dplR versions 1.1 dated 2008-04-22 and 1.1.1 dated 2008-05-25
DESCRIPTION | 6 ++- NAMESPACE |only R/skel.plot.R | 88 ++++++++++++++++++++++++++++++++++++++++++++-------- man/chron.Rd | 2 - man/dplR-package.Rd | 1 man/skel.plot.Rd | 15 +++++--- 6 files changed, 90 insertions(+), 22 deletions(-)
Author: Max Kuhn, contributions from Steve Weston, Jed Wing and James Forester
Title: A collection of contrast methods
Description: Contrast methods, in the style of the Design package,
for fit objects produced by the lm, glm, gls, and geese functions.
Diff between contrast versions 0.6 dated 2007-11-27 and 0.8 dated 2008-05-25
._contrast |only contrast/._DESCRIPTION |only contrast/._NAMESPACE |only contrast/._R |only contrast/._inst |only contrast/._man |only contrast/DESCRIPTION | 11 +- contrast/R/._contrast.lm.R |only contrast/R/._gets.R |only contrast/R/._misc.R |only contrast/R/._model.frames.R |only contrast/R/._print.contrast.R |only contrast/R/._testStatistic.R |only contrast/R/contrast.lm.R | 33 +++++++- contrast/R/print.contrast.R | 7 + contrast/inst/._doc |only contrast/inst/doc/._contrast.Rnw |only contrast/inst/doc/contrast-example1Plot.eps |only contrast/inst/doc/contrast-example1Plot.pdf |only contrast/inst/doc/contrast-example2Plot.eps |only contrast/inst/doc/contrast-example2Plot.pdf |only contrast/inst/doc/contrast.Rnw | 111 ++++++++++++++++------------ contrast/inst/doc/contrast.aux |only contrast/inst/doc/contrast.log |only contrast/inst/doc/contrast.out |only contrast/inst/doc/contrast.pdf |binary contrast/inst/doc/contrast.tex | 61 ++++++++++----- contrast/man/._contrast.Rd |only contrast/man/contrast.Rd | 5 + 29 files changed, 155 insertions(+), 73 deletions(-)
Author: Venkatraman E. Seshan
Title: Clinical Trial Design and Data Analysis Functions
Description: Utilities to make your clinical collaborations easier if not fun.
Diff between clinfun versions 0.7-5 dated 2008-05-13 and 0.8.0 dated 2008-05-25
CHANGES |only DESCRIPTION | 5 +++-- INDEX | 1 + NAMESPACE | 3 ++- R/lehmann.R |only R/permlogrank.R | 2 +- man/ph2simon.Rd | 2 ++ man/power.ladesign.Rd |only src/lehmann.f |only src/rshared.c |only 10 files changed, 9 insertions(+), 4 deletions(-)
Author: Tom Price
Diff between cgh versions 1.0-2 dated 2006-11-15 and 1.0-3 dated 2008-05-25
Title: Microarray CGH analysis using the Smith-Waterman algorithm
Description: Functions to analyze microarray comparative genome hybridization data using the Smith-Waterman algorithm
Changes | 25 +++++++++++++++----------
DESCRIPTION | 14 +++++++-------
2 files changed, 22 insertions(+), 17 deletions(-)
Author: Carsten F. Dormann and Bernd Gruber, with additional code from Jochen Fruend, based on the C-code developed by Nils Bluethgen.
Title: Visualises bipartite networks and calculates some ecological indices.
Description: See bipartite-package for more details.
Diff between bipartite versions 0.7 dated 2008-05-16 and 0.72 dated 2008-05-25
DESCRIPTION | 6 - R/visweb.R | 165 +++++++++++++++++++++++++---------------------- man/bipartite-package.Rd | 4 - man/visweb.Rd | 2 4 files changed, 94 insertions(+), 83 deletions(-)
Author: Sanford Weisberg
Diff between alr3 versions 1.1.6 dated 2007-10-27 and 1.1.7 dated 2008-05-25
Title: Methods and data to accompany Applied Linear Regression 3rd edition
Description: This library is a companion to the textbook S. Weisberg (2005),
"Applied Linear Regression," 3rd edition, Wiley. It includes all the
data sets discussed in the book (except one), and several few functions that
are tailored to the methods discussed in the book. Ver. 1.0.3 corrects bugs in (1) weights for POD models; (2) use of 'subset' arguments with boot.case. Ver. 1.0.4 corrects a few bugs with overparameterized models. Ver. 1.0.5 changes one default argument. Ver 1.0.6 replaces the pure.error.anova function so it prints nicer and works with interactions. Ver 1.0.7 fixes a bug in residual.plots and
adds an additional argument and adds a new function alrweb to access the
website for the book in a browser. Ver 1.0.8 fixed a bug in delta.method for
generalized linear models. Ver 1.0.9 fixes a bug with Yeo Johnson
transformations. Ver 1.1.0 drops the conf.intervals function in favor of
the confint function in stat, includes several minor bug fixes, and makes
the package fully compatible with version 2.6.0 of R. 1.1.2 corrects a bug
introduced in boot.case. Version 1.1.7 adds a namespace.
alr3-1.1.6/alr3/R/alr3.Rcheck |only
alr3-1.1.7/alr3/DESCRIPTION | 8 -
alr3-1.1.7/alr3/NAMESPACE |only
alr3-1.1.7/alr3/R/alr3.R | 243 +++++++++++++++++++--------------
alr3-1.1.7/alr3/Rwork |only
alr3-1.1.7/alr3/man/bctrans.Rd | 3
alr3-1.1.7/alr3/man/mmps.Rd | 50 ++++--
alr3-1.1.7/alr3/man/random.lin.comb.Rd | 8 -
alr3-1.1.7/alr3/man/residual.plots.Rd | 27 ++-
9 files changed, 208 insertions(+), 131 deletions(-)
Author: Daniel Chessel, Anne-Beatrice Dufour
Diff between ade4 versions 1.4-8 dated 2008-05-16 and 1.4-9 dated 2008-05-25
Title: Analysis of Ecological Data : Exploratory and Euclidean methods in Environmental sciences
Description: Multivariate data analysis and graphical display.
ChangeLog | 27 +++++++++++++++++++++++++++
DESCRIPTION | 6 +++---
R/krandtest.R | 16 +++++++++-------
R/mantel.randtest.R | 1 -
R/niche.R | 1 -
R/procuste.randtest.R | 1 -
R/randtest.amova.R | 2 +-
R/randtest.between.R | 3 +--
R/randtest.coinertia.R | 1 -
R/randtest.discrimin.R | 3 +--
man/krandtest.Rd | 8 +++++---
11 files changed, 47 insertions(+), 22 deletions(-)
Author: Erin Hodgess
Diff between RcmdrPlugin.epack versions 1.0-1 dated 2007-12-24 and 1.1-1 dated 2008-05-25
More information about RcmdrPlugin.epack at CRAN
Title: Rcmdr plugin for time series
Description: This package provides an Rcmdr "plug-in" based on the
time series functions. Contributors: G. Jay Kerns, John Fox, and Richard Heiberger.
DESCRIPTION | 14 +-
R/RcmdrPlugin.epack.R | 184 ++++++++++++++++++++++++++++++++++++++
R/decom6.R |only
decom6.R |only
inst/etc/menus.txt | 56 ++++++++---
man/RcmdrPlugin.epack-internal.Rd | 5 +
6 files changed, 238 insertions(+), 21 deletions(-)
Permanent link
Author: Eric Lecoutre
Diff between R2HTML versions 1.58 dated 2006-09-29 and 1.59 dated 2008-05-25
Title: HTML exportation for R objects
Description: Includes HTML function and methods to write in an HTML file. Thus, making HTML reports is easy. Includes a function that allows redirection on the fly, which appears to be very usefull for teaching purpose, as the student can keep a copy of the produced output to keep all that he did during the course. Package comes with a vignette describing how to write HTML reports for statistical analysis. Finally, a driver for Sweave allows to parse HTML flat files containing R code and to automatically write the corresponding outputs (tables and graphs).
DESCRIPTION | 6
NAMESPACE | 2
NEWS | 58 +++++
R/HTMLcore.R | 476 +++++++++++++++++++++++++++---------------------
R/HTMLlme.R | 8
R/LaTeX.R | 4
R/grid.R | 6
inst/CITATION |only
inst/samples/R2HTML.css | 36 ++-
man/HTML.cormat.Rd | 4
man/HTML.data.frame.Rd | 8
man/HTML.function.Rd | 5
man/HTML.latex.Rd | 4
man/HTML.title.Rd | 2
man/HTMLCSS.Rd | 2
man/HTMLInitFile.Rd | 2
man/HTMLInsertGraph.Rd | 2
man/HTMLbr.Rd | 6
man/HTMLgrid.Rd | 4
man/HTMLplot.Rd | 2
man/HTMLstem.Rd | 2
man/R2HTML-internal.Rd | 2
22 files changed, 379 insertions(+), 262 deletions(-)
Author: Spencer Graves
Title: Companion to Tsay (2005) Analysis of Financial
Time Series
Description: R companion to Tsay (2005)
Analysis of Financial Time Series, 2nd ed. (Wiley).
Includes data sets, functions and script files
required to work some of the examples. Version 0.2-x
includes R objects for all data files used in the text
and script files to recreate most of the analyses in
chapters 1 and 2 plus parts of chapters 3 and 11.
Diff between FinTS versions 0.3-1 dated 2008-03-21 and 0.3-3 dated 2008-05-25
DESCRIPTION | 10 +-- R/Acf.R | 30 +++------ R/FinTS.stats.R | 22 ++++++- R/Unitroot.R | 15 +++- R/package.dir.R |only R/plot.loadings.R |only R/runscript.R |only inst/scripts/TsayFiles.R | 6 - inst/scripts/ch01.R | 5 - inst/scripts/ch02.R | 5 - inst/scripts/ch03.R | 6 - inst/scripts/ch04.R | 27 +++++++- inst/scripts/ch09.R | 140 +++++++++++++++++++++++++++++++++++++++++++++ inst/scripts/ch11.R | 5 - inst/scripts/create-ch01.R | 6 - inst/scripts/create-ch02.R | 6 - inst/scripts/create-ch03.R | 6 - inst/scripts/create-ch04.R | 6 - inst/scripts/create-ch05.R | 6 - inst/scripts/create-ch06.R | 6 - inst/scripts/create-ch07.R | 6 - inst/scripts/create-ch08.R | 6 - inst/scripts/create-ch09.R | 6 - inst/scripts/create-ch10.R | 6 - inst/scripts/create-ch11.R | 6 - inst/scripts/create-ch12.R | 6 - man/Acf.Rd | 3 man/findConjugates.Rd | 8 +- man/package.dir.Rd |only man/plot.loadings.Rd |only man/runscript.Rd |only 31 files changed, 245 insertions(+), 109 deletions(-)