Mon, 26 May 2008

Package dynamo updated to version 0.1.3 with previous version 0.1.2 dated 2008-05-26

Author: Christian T. Brownlees
Title: Dynamic Models
Description: Routines for estimation, simulation, regularization and prediction of univariate dynamic models including: ARMA, ARMA-GARCH, ACD, MEM.

Diff between dynamo versions 0.1.2 dated 2008-05-26 and 0.1.3 dated 2008-05-26

 DESCRIPTION           |    5 +++--
 man/dynamo-package.Rd |    2 +-
 src/Makevars.win      |    5 ++---
 3 files changed, 6 insertions(+), 6 deletions(-)

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Package spBayes updated to version 0.0-8 with previous version 0.0-7 dated 2008-04-15

Author: Andrew O. Finley , Sudipto Banerjee , Bradley P. Carlin
Title: Univariate and Multivariate Spatial Modeling
Description: spBayes fits Gaussian univariate and multivariate models with Markov chain Monte Carlo (MCMC).

Diff between spBayes versions 0.0-7 dated 2008-04-15 and 0.0-8 dated 2008-05-26

 DESCRIPTION                   |    6 
 R/BayesianRegression.R        |   45 +++++-
 R/dic.R                       |  161 +++++++++++++++++++++-
 R/sp.predict.R                |    4 
 R/splm.R                      |    6 
 inst/doc/spBayes-vignette.log |    4 
 inst/doc/spBayes-vignette.pdf |binary
 man/bayes.lm.conjugate.Rd     |    8 -
 man/bayes.lm.ref.Rd           |   10 -
 man/sp.DIC.Rd                 |   23 ++-
 man/sp.lm.Rd                  |    8 -
 src/splm.cpp                  |  211 ++++++++++++++++-------------
 src/splmDIC.cpp               |  300 ++++++++++++++++++++++++++----------------
 src/splmPredict.cpp           |   32 +++-
 14 files changed, 561 insertions(+), 257 deletions(-)

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New package smacof with initial version 0.9-0
Package: smacof
Type: Package
Title: smacof for Multidimensional Scaling.
Version: 0.9-0
Date: 2008-05-24
Author: Jan de Leeuw, Patrick Mair
Maintainer: Jan de Leeuw
Description: This package provides the following approaches of multidimensional scaling (MDS) based on stress minimization by means of majorization (smacof): Simple smacof on symmetric dissimilarity matrices, smacof for rectangular matrices (unfolding models), smacof with constraints on the configuration, three-way smacof for individual differences (including constraints for idioscal, indscal, and identity), and spherical smacof (primal and dual algorithm). Each of these approaches is implemented in a metric and nonmetric manner including primary, secondary, and tertiary approaches for tie handling.
Imports: graphics, stats
Depends: R (>= 2.7.0), polynom, rgl, scatterplot3d
License: GPL
Packaged: Sun May 25 04:46:11 2008; theussl

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Package mixPHM updated to version 0.6.0 with previous version 0.5.1 dated 2007-08-04

Author: Patrick Mair, Marcus Hudec
Title: Mixtures of proportional hazard models.
Description: This package fits multiple variable mixtures of various parametric proportional hazard models using the EM-Algorithm. Proportionality restrictions can be imposed on the latent groups and/or on the variables. Several survival distributions can be specified. Missing values are allowed. Independence is assumed over the single variables.

Diff between mixPHM versions 0.5.1 dated 2007-08-04 and 0.6.0 dated 2008-05-26

 DESCRIPTION           |    6 ++--
 NAMESPACE             |    2 +
 R/Eclass.R            |   44 ++++++++++++++++++++----------
 R/Emax.R              |   14 +++++----
 R/WilcoxH.R           |only
 R/msBIC.R             |    6 ++--
 R/phmclust.R          |   72 ++++++++++++++++++++++++++++++++++++++++----------
 R/print.mws.R         |    4 +-
 R/print.wilcoxh.R     |only
 R/screeBIC.R          |    2 -
 R/stableEM.R          |    4 +-
 data/webshop.rda      |binary
 man/WilcoxH.Rd        |only
 man/mixPHM-package.Rd |    6 ++--
 man/msBIC.Rd          |    3 +-
 man/phmclust.Rd       |   18 +++++++-----
 man/stableEM.Rd       |    5 ++-
 man/webshop.Rd        |    9 +-----
 18 files changed, 131 insertions(+), 64 deletions(-)

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Package glmmML updated to version 0.81-1 with previous version 0.72-0 dated 2008-01-04

Author: Göran Broström
Title: Generalized linear models with clustering
Description: A Maximum Likelihood and bootstrap approach to mixed models

Diff between glmmML versions 0.72-0 dated 2008-01-04 and 0.81-1 dated 2008-05-26

 DESCRIPTION       |    6 
 R/glmmML.R        |    5 
 R/glmmML.fit.R    |    2 
 man/glmmML.fit.Rd |    8 
 src/fun.c         | 1086 +++++++++++-------------------------------------------
 src/ghq.f         |    2 
 src/glmmml.c      |   21 -
 src/glmmml.h      |    1 
 8 files changed, 260 insertions(+), 871 deletions(-)

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New package dynamo with initial version 0.1.2
Package: dynamo
Title: Dynamic Models
Type: Package
Version: 0.1.2
Date: 2007-12-20
Author: Christian T. Brownlees
Maintainer: Christian T. Brownlees
Depends: R (>= 2.5)
Description: Routines for estimation, simulation, regularization and prediction of univariate dynamic models including: ARMA, ARMA-GARCH, ACD, MEM.
License: GPL (>=3)
Packaged: Mon May 26 00:04:30 2008; ctb

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New package FTICRMS with initial version 0.5
Package: FTICRMS
Type: Package
Title: Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data
Version: 0.5
Date: 2008-05-24
Author: Don Barkauskas
Maintainer: Don Barkauskas
Depends: Matrix,lattice,splines
Description: This package was developed partially with funding from the NIH Training Program in Biomolecular Technology (2-T32-GM08799).
License: GPL-2
Packaged: Sun May 25 13:04:10 2008; Don

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