CRANberries

Mon, 21 Jul 2008

Package rgl updated to version 0.80 with previous version 0.79 dated 2008-06-03

Author: Daniel Adler , Duncan Murdoch
Title: 3D visualization device system (OpenGL)
Description: 3D visualization device (OpenGL)

Diff between rgl versions 0.79 dated 2008-06-03 and 0.80 dated 2008-07-21

 rgl-0.79/rgl/src/ext/ftgl/FTBBox.h                |only
 rgl-0.79/rgl/src/ext/ftgl/FTBitmapGlyph.cpp       |only
 rgl-0.79/rgl/src/ext/ftgl/FTBitmapGlyph.h         |only
 rgl-0.79/rgl/src/ext/ftgl/FTExtrdGlyph.cpp        |only
 rgl-0.79/rgl/src/ext/ftgl/FTExtrdGlyph.h          |only
 rgl-0.79/rgl/src/ext/ftgl/FTFont.cpp              |only
 rgl-0.79/rgl/src/ext/ftgl/FTFont.h                |only
 rgl-0.79/rgl/src/ext/ftgl/FTGL.h                  |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLBitmapFont.cpp      |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLBitmapFont.h        |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLExtrdFont.cpp       |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLExtrdFont.h         |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLOutlineFont.cpp     |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLOutlineFont.h       |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLPixmapFont.cpp      |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLPixmapFont.h        |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLPolygonFont.cpp     |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLPolygonFont.h       |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLTextureFont.cpp     |only
 rgl-0.79/rgl/src/ext/ftgl/FTGLTextureFont.h       |only
 rgl-0.79/rgl/src/ext/ftgl/FTGlyph.cpp             |only
 rgl-0.79/rgl/src/ext/ftgl/FTGlyph.h               |only
 rgl-0.79/rgl/src/ext/ftgl/FTOutlineGlyph.cpp      |only
 rgl-0.79/rgl/src/ext/ftgl/FTOutlineGlyph.h        |only
 rgl-0.79/rgl/src/ext/ftgl/FTPixmapGlyph.cpp       |only
 rgl-0.79/rgl/src/ext/ftgl/FTPixmapGlyph.h         |only
 rgl-0.79/rgl/src/ext/ftgl/FTPoint.h               |only
 rgl-0.79/rgl/src/ext/ftgl/FTPolyGlyph.cpp         |only
 rgl-0.79/rgl/src/ext/ftgl/FTPolyGlyph.h           |only
 rgl-0.79/rgl/src/ext/ftgl/FTTextureGlyph.cpp      |only
 rgl-0.79/rgl/src/ext/ftgl/FTTextureGlyph.h        |only
 rgl-0.80/rgl/DESCRIPTION                          |   26 
 rgl-0.80/rgl/R/r3d.rgl.R                          |    4 
 rgl-0.80/rgl/configure                            | 4740 ++++++++++++----------
 rgl-0.80/rgl/inst/NEWS                            |    4 
 rgl-0.80/rgl/man/texts.Rd                         |    3 
 rgl-0.80/rgl/src/BBoxDeco.cpp                     |  108 
 rgl-0.80/rgl/src/TextSet.hpp                      |    6 
 rgl-0.80/rgl/src/build/autoconf/config.guess      |   60 
 rgl-0.80/rgl/src/build/autoconf/config.sub        |   78 
 rgl-0.80/rgl/src/build/autoconf/install-sh        |  678 ++-
 rgl-0.80/rgl/src/ext/ftgl/FTBuffer.cpp            |only
 rgl-0.80/rgl/src/ext/ftgl/FTCharToGlyphIndexMap.h |   91 
 rgl-0.80/rgl/src/ext/ftgl/FTCharmap.cpp           |   90 
 rgl-0.80/rgl/src/ext/ftgl/FTCharmap.h             |   71 
 rgl-0.80/rgl/src/ext/ftgl/FTContour.cpp           |  306 -
 rgl-0.80/rgl/src/ext/ftgl/FTContour.h             |  155 
 rgl-0.80/rgl/src/ext/ftgl/FTFace.cpp              |  177 
 rgl-0.80/rgl/src/ext/ftgl/FTFace.h                |   72 
 rgl-0.80/rgl/src/ext/ftgl/FTFont                  |only
 rgl-0.80/rgl/src/ext/ftgl/FTGL                    |only
 rgl-0.80/rgl/src/ext/ftgl/FTGlyph                 |only
 rgl-0.80/rgl/src/ext/ftgl/FTGlyphContainer.cpp    |  108 
 rgl-0.80/rgl/src/ext/ftgl/FTGlyphContainer.h      |   66 
 rgl-0.80/rgl/src/ext/ftgl/FTInternals.h           |only
 rgl-0.80/rgl/src/ext/ftgl/FTLayout                |only
 rgl-0.80/rgl/src/ext/ftgl/FTLibrary.cpp           |   51 
 rgl-0.80/rgl/src/ext/ftgl/FTLibrary.h             |   55 
 rgl-0.80/rgl/src/ext/ftgl/FTList.h                |   57 
 rgl-0.80/rgl/src/ext/ftgl/FTPoint.cpp             |   51 
 rgl-0.80/rgl/src/ext/ftgl/FTSize.cpp              |   71 
 rgl-0.80/rgl/src/ext/ftgl/FTSize.h                |   58 
 rgl-0.80/rgl/src/ext/ftgl/FTUnicode.h             |only
 rgl-0.80/rgl/src/ext/ftgl/FTVector.h              |  147 
 rgl-0.80/rgl/src/ext/ftgl/FTVectoriser.cpp        |  265 -
 rgl-0.80/rgl/src/ext/ftgl/FTVectoriser.h          |  140 
 rgl-0.80/rgl/src/ext/ftgl/config.h                |only
 rgl-0.80/rgl/src/ftgl.cpp                         |   24 
 rgl-0.80/rgl/src/glgui.cpp                        |    8 
 rgl-0.80/rgl/src/glgui.hpp                        |    4 
 70 files changed, 4798 insertions(+), 2976 deletions(-)

More information about rgl at CRAN

posted at: 13:16 | path: /cran/updated | permanent link to this entry

New package prodlim with initial version 1.0.5
Package: prodlim
Title: Product Limit Estimation
Version: 1.0.5
Author: Thomas A. Gerds
Description: Fast and user friendly nonparametric estimation in censored survival (event history) analysis.
Depends: R (>= 1.9.1), KernSmooth, survival
Maintainer: Thomas A. Gerds
License: GPL2
Packaged: Mon Jul 21 14:31:19 2008; tag

More information about prodlim at CRAN

posted at: 13:16 | path: /cran/new | permanent link to this entry

Package deSolve updated to version 1.2-1 with previous version 1.2 dated 2008-07-18

Author: Karline Soetaert , Thomas Petzoldt , R. Woodrow Setzer
Title: General solvers for ordinary differential equations (ODE) and for differential algebraic equations (DAE)
Description: Functions that solve a system of first-order ordinary differential equations (ODE) and of differential algebraic equations (DAE). The functions provide an interface to the FORTRAN functions lsoda, lsodar, lsode, lsodes, dvode and daspk. The package also contains routines designed for solving uni-and multicomponent 1-D and 2-D reactive transport models.

Diff between deSolve versions 1.2 dated 2008-07-18 and 1.2-1 dated 2008-07-21

 DESCRIPTION               |    4 
 inst/doc/compiledCode.Rnw |   26 
 inst/doc/compiledCode.pdf | 1549 ++++++++++++++++++++++++----------------------
 3 files changed, 840 insertions(+), 739 deletions(-)

More information about deSolve at CRAN

posted at: 13:16 | path: /cran/updated | permanent link to this entry

Package pomp updated to version 0.20-4 with previous version 0.20-2 dated 2008-07-16

Author: Aaron A. King, Edward L. Ionides, Carles Martinez Breto
Title: Partially-observed Markov processes
Description: Inference methods for partially-observed Markov processes

Diff between pomp versions 0.20-2 dated 2008-07-16 and 0.20-4 dated 2008-07-21

 DESCRIPTION                        |    6 
 R/aaa.R                            |    1 
 R/init.state-pomp.R                |    6 
 R/pomp.R                           |    9 -
 data/ou2.rda                       |binary
 inst/ChangeLog                     |  266 +++++++++++++++++++++++--------------
 inst/NEWS                          |   74 ++++++----
 inst/doc/compiled_code_in_pomp.Rnw |    2 
 inst/doc/compiled_code_in_pomp.pdf |binary
 inst/doc/intro_to_pomp.Rnw         |   34 +---
 inst/doc/intro_to_pomp.pdf         |binary
 inst/examples/logistic.R           |only
 inst/examples/rw2.R                |only
 inst/examples/sir.c                |    4 
 inst/include/pomp.h                |    9 -
 man/dprocess-pomp.Rd               |   88 ++++++------
 man/mif-class.Rd                   |    2 
 man/ou2.Rd                         |    1 
 man/pomp-class.Rd                  |    4 
 man/pomp.Rd                        |    8 -
 man/rmeasure-pomp.Rd               |    6 
 src/dmeasure.c                     |   17 --
 src/dprocess.c                     |   28 ++-
 src/euler.c                        |  156 +++++++++++++++------
 src/eulermultinom.c                |    2 
 src/initstate.c                    |   42 +++++
 src/lookup_table.c                 |   26 +--
 src/ou2.c                          |   14 -
 src/pomp.h                         |    9 -
 src/pomp_internal.h                |    3 
 src/rmeasure.c                     |   65 ++++++---
 src/rprocess.c                     |   28 ++-
 src/sir.c                          |    4 
 tests/logistic.R                   |only
 tests/logistic.Rout.save           |only
 tests/sir.R                        |   32 ++--
 tests/sir.Rout.save                |   76 +++++-----
 37 files changed, 613 insertions(+), 409 deletions(-)

More information about pomp at CRAN

posted at: 05:16 | path: /cran/updated | permanent link to this entry

Package compare updated to version 0.2 with previous version 0.1 dated 2008-06-16

Author: Paul Murrell
Title: Comparing Objects for Differences
Description: Functions for comparing vectors and data frames.

Diff between compare versions 0.1 dated 2008-06-16 and 0.2 dated 2008-07-21

 DESCRIPTION                |    6 
 NAMESPACE                  |    5 
 R/file.R                   |    9 +
 R/same.R                   |  278 +++++++++++++++++++++++++++++++++------------
 inst/doc/compare-intro.Rnw |    2 
 inst/doc/compare-intro.pdf |binary
 inst/doc/compare.tex       |   84 ++++++++-----
 inst/doc/fundamentals.pdf  |binary
 man/compareEqual.Rd        |    7 -
 man/compareFile.Rd         |    8 +
 tests/test.R               |  105 ++++++++++++++++
 11 files changed, 397 insertions(+), 107 deletions(-)

More information about compare at CRAN

posted at: 05:16 | path: /cran/updated | permanent link to this entry

Package R.matlab updated to version 1.2.3 with previous version 1.2.2 dated 2008-07-18

Author: Henrik Bengtsson , Jason Riedy
Title: Read and write of MAT files together with R-to-Matlab connectivity
Description: This package provides methods to read and write MAT files. It also makes it possible to communicate (evaluate code, send and retrieve objects etc.) with Matlab v6 or higher running locally or on a remote host.

Diff between R.matlab versions 1.2.2 dated 2008-07-18 and 1.2.3 dated 2008-07-21

 R.matlab-1.2.2/R.matlab/inst/mat-files/StructWithSparseMatrix-v4.mat            |only
 R.matlab-1.2.3/R.matlab/DESCRIPTION                                             |    6 +-
 R.matlab-1.2.3/R.matlab/R/readMat.R                                             |    2 
 R.matlab-1.2.3/R.matlab/incl/readMat.Rex                                        |   26 ++++++----
 R.matlab-1.2.3/R.matlab/inst/NEWS                                               |    5 +
 R.matlab-1.2.3/R.matlab/inst/mat-files/StructWithSparseMatrix-v4,compressed.mat |only
 R.matlab-1.2.3/R.matlab/man/Matlab.Rd                                           |    2 
 R.matlab-1.2.3/R.matlab/man/R.matlab-package.Rd                                 |    2 
 R.matlab-1.2.3/R.matlab/man/readMat.Rd                                          |   26 ++++++----
 R.matlab-1.2.3/R.matlab/man/writeMat.Rd                                         |   17 ++++++
 10 files changed, 63 insertions(+), 23 deletions(-)

More information about R.matlab at CRAN

posted at: 05:16 | path: /cran/updated | permanent link to this entry

Package MatchIt updated to version 2.4-5 with previous version 2.4-4 dated 2008-07-20

Author: Daniel Ho , Elizabeth Stuart , Kosuke Imai , Gary King
Title: MatchIt
Description: MatchIt preprocesses data by selecting approximate matched samples of the treated and control groups with similar covariate distributions, drawing on a large variety of matching methods. After preprocessing data with MatchIt, whatever standard parametric technique one might have used without preprocessing can be used, but the results will be far less model dependent.

Diff between MatchIt versions 2.4-4 dated 2008-07-20 and 2.4-5 dated 2008-07-21

 DESCRIPTION          |    6 
 R/matchit.R          |    2 
 inst/doc/index.shtml |    2 
 inst/doc/matchit.log |    4 
 inst/doc/matchit.pdf | 1970 +++++++++++++++++++++++++--------------------------
 inst/doc/matchit.tex |    1 
 6 files changed, 992 insertions(+), 993 deletions(-)

More information about MatchIt at CRAN

posted at: 05:16 | path: /cran/updated | permanent link to this entry