Author: Roger Bivand
Title: Interface between GRASS 6 geographical information system and R
Description: Interpreted interface between GRASS 6 geographical
information system and R, based on starting R from within the GRASS
environment.
Diff between spgrass6 versions 0.5-13 dated 2008-09-28 and 0.5-15 dated 2008-10-17
ChangeLog | 16 ++++++++++++++++ DESCRIPTION | 6 +++--- R/bin_link.R | 32 ++++++++++++-------------------- inst/ChangeLog | 16 ++++++++++++++++ man/readRAST6.Rd | 3 ++- man/readVECT6.Rd | 4 +--- 6 files changed, 50 insertions(+), 27 deletions(-)
Author: Thomas Baier
Title: provides portable C-style interface to R (StatConnector)
Description: rscproxy library provides an interface to R used by third party applications, most notable, but not limited to, rcom/R Scilab (D)COM Server, ROOo and other systems.
Diff between rscproxy versions 1.0-9 dated 2008-10-14 and 1.0-11 dated 2008-10-17
DESCRIPTION | 6 +++--- src/rproxy_impl.h | 4 +++- 2 files changed, 6 insertions(+), 4 deletions(-)
Author: Timothy H. Keitt
Diff between rgdal versions 0.5-26 dated 2008-09-28 and 0.5-27 dated 2008-10-17
Title: Bindings for the Geospatial Data Abstraction Library
Description: Provides bindings to Frank Warmerdam's Geospatial Data Abstraction Library (GDAL) (>= 1.3.1) and access to projection/transformation operations from the PROJ.4 library. The GDAL and PROJ.4 libraries are external to the package, and, when installing the package from source, must be correctly installed first. Both GDAL raster and OGR vector map data can be imported into R, and GDAL raster data and OGR vector data exported. Use is made of classes defined in the sp package.
ChangeLog | 13 +++++
DESCRIPTION | 6 +-
inst/ChangeLog | 13 +++++
inst/gdal/GDALLogoBW.svg |only
inst/gdal/GDALLogoColor.svg |only
inst/gdal/GDALLogoGS.svg |only
man/readOGR.Rd | 6 +-
man/writeOGR.Rd | 2
src/OGR_write.cpp | 102 ++++++++++++++++++--------------------------
src/RGDAL.def | 2
src/ogrsource.cpp | 12 +++--
11 files changed, 86 insertions(+), 70 deletions(-)
Author: Ben Bolker
Title: Ecological models and data (book support)
Description: Auxiliary functions and data sets for _Ecological Models and Data_, a book presenting maximum likelihood estimation and related topics for ecologists (in preparation for Princeton University Press)
Diff between emdbook versions 1.1.1 dated 2007-12-12 and 1.1.1.1 dated 2008-10-17
DESCRIPTION | 6 +- NEWS | 93 ++++++++++++++++++++++++--------------------- R/emdbook.R | 102 ++++++++++++++++++++++++++++++++++++-------------- inst/BUGS/firfec0.bug |only inst/BUGS/firfec1.bug |only inst/BUGS/firfec2.bug |only inst/misc |only man/curve3d.Rd | 34 +++++++++++++++- man/traceplot.mcmc.Rd |only 9 files changed, 158 insertions(+), 77 deletions(-)
Author: Duncan Temple Lang
Title: HTTP request interface
Description: The package allows one to compose HTTP requests to fetch URIs, post forms,
etc. and process the results returned by the Web server.
This provides a great deal of control over the HTTP connection and the form
of the request while providing a higher-level interface than is available just
using R socket connections. Additionally, the underlying implementation is robust
and extensive, supporting SSL/HTTPS, cookies, redirects, authentication, etc.
Diff between RCurl versions 0.9-4 dated 2008-07-28 and 0.91-0 dated 2008-10-17
RCurl-0.9-4/RCurl/inst/doc/philosophy.html |only RCurl-0.91-0/RCurl/Changes.html | 53 ++++++++++++- RCurl-0.91-0/RCurl/DESCRIPTION | 7 - RCurl-0.91-0/RCurl/FAQ.html | 89 +++++++++++++++++++++- RCurl-0.91-0/RCurl/NAMESPACE | 1 RCurl-0.91-0/RCurl/R/binary.S | 11 ++ RCurl-0.91-0/RCurl/R/form.S | 26 +++++- RCurl-0.91-0/RCurl/R/header.R | 81 +++++++++++++------- RCurl-0.91-0/RCurl/R/httpError.R |only RCurl-0.91-0/RCurl/R/httpErrors.R |only RCurl-0.91-0/RCurl/R/options.S | 11 ++ RCurl-0.91-0/RCurl/Todo.html | 8 + RCurl-0.91-0/RCurl/inst/HTTPErrors |only RCurl-0.91-0/RCurl/inst/examples/omg.netrc |only RCurl-0.91-0/RCurl/inst/examples/postFormPasswd.R |only RCurl-0.91-0/RCurl/man/getBinaryURL.Rd |only RCurl-0.91-0/RCurl/src/Makevars | 6 - RCurl-0.91-0/RCurl/src/curl.c | 17 +++- 18 files changed, 268 insertions(+), 42 deletions(-)
Author: Fortran original by Leo Breiman and Adele Cutler, R port by Andy Liaw and Matthew Wiener.
Title: Breiman and Cutler's random forests for classification and regression
Description: Classification and regression based on a forest of trees using random inputs.
Diff between randomForest versions 4.5-27 dated 2008-09-12 and 4.5-28 dated 2008-10-17
DESCRIPTION | 6 +-- inst/NEWS | 5 +++ man/randomForest.Rd | 4 ++ src/classTree.c | 83 ++++++++++++++++++++++++++-------------------------- src/regTree.c | 77 ++++++++++++++++++++++++------------------------ src/rf.h | 2 - src/rfutils.c | 4 +- 7 files changed, 96 insertions(+), 85 deletions(-)
Author: P. Roebuck
Title: MATLAB emulation package
Description: Emulate MATLAB code using R
Diff between matlab versions 0.8-1 dated 2006-10-04 and 0.8-2 dated 2008-10-17
matlab-0.8-1/matlab/COPYING |only matlab-0.8-1/matlab/inst |only matlab-0.8-2/matlab/DESCRIPTION | 13 +++++++------ matlab-0.8-2/matlab/LICENSE |only matlab-0.8-2/matlab/NEWS |only matlab-0.8-2/matlab/man/colorbar.Rd | 6 +----- matlab-0.8-2/matlab/man/matlab-package.Rd | 4 ++-- 7 files changed, 10 insertions(+), 13 deletions(-)
Author: G. Grothendieck
Title: Utilities for strings and function arguments.
Description: gsubfn is like gsub but can take a replacement function
or proto object rather than a replacement string. Matches and
back references are input to the function and replaced by the
function output. In the case of a proto object the object is
used for sharing information from one match to the next.
gsubfn can be used to split strings based on content rather than
delimiters and for quasi-perl-style string interpolation. The
package also has facilities for translating formulas to functions
and allowing such formulas in function calls instead of functions.
This can reduce code size and improve clarity when using apply,
lapply, optim, integrate, xyplot and any other function that
expects another function as an input argument. gsubfn also
provides for quasi-perl string interpolation in arguments
of any existing R function.
Diff between gsubfn versions 0.3-3 dated 2006-10-28 and 0.3-7 dated 2008-10-17
gsubfn-0.3-3/gsubfn/NOTES |only gsubfn-0.3-3/gsubfn/demo/gsubfn-proto.R |only gsubfn-0.3-3/gsubfn/inst/doc/aa.pdf |only gsubfn-0.3-3/gsubfn/inst/doc/gsubfn-gsubfn-fn-lattice-repeat.pdf |only gsubfn-0.3-3/gsubfn/inst/doc/gsubfn-gsubfn-fn-pi-repeat.pdf |only gsubfn-0.3-3/gsubfn/inst/doc/gsubfn-gsubfn-fn-quantreg-repeat.pdf |only gsubfn-0.3-7/gsubfn/DESCRIPTION | 8 gsubfn-0.3-7/gsubfn/R/fn.R | 23 gsubfn-0.3-7/gsubfn/R/gsubfn.R | 63 +- gsubfn-0.3-7/gsubfn/demo/00Index | 1 gsubfn-0.3-7/gsubfn/demo/gsubfn-chron.R | 2 gsubfn-0.3-7/gsubfn/demo/gsubfn-gries.R | 2 gsubfn-0.3-7/gsubfn/demo/gsubfn-si.R | 4 gsubfn-0.3-7/gsubfn/inst/NEWS | 42 + gsubfn-0.3-7/gsubfn/inst/WISHLIST | 12 gsubfn-0.3-7/gsubfn/inst/doc/.build.timestamp |only gsubfn-0.3-7/gsubfn/inst/doc/Rplots.pdf |only gsubfn-0.3-7/gsubfn/inst/doc/a.a | 235 +++------- gsubfn-0.3-7/gsubfn/inst/doc/gsubfn-16.10.2008-14.02.36.23.bck.pdf |only gsubfn-0.3-7/gsubfn/inst/doc/gsubfn.R |only gsubfn-0.3-7/gsubfn/inst/doc/gsubfn.Rnw | 57 +- gsubfn-0.3-7/gsubfn/inst/doc/gsubfn.pdf |binary gsubfn-0.3-7/gsubfn/man/as.function.formula.Rd | 12 gsubfn-0.3-7/gsubfn/man/fn.Rd | 2 gsubfn-0.3-7/gsubfn/man/gsubfn-package.Rd | 5 gsubfn-0.3-7/gsubfn/man/gsubfn.Rd | 56 +- gsubfn-0.3-7/gsubfn/man/match.funfn.Rd | 5 gsubfn-0.3-7/gsubfn/man/strapply.Rd | 11 28 files changed, 291 insertions(+), 249 deletions(-)
Author: Heather Turner and David Firth
Title: Generalized Nonlinear Models
Description: Functions to specify and fit generalized nonlinear models, including models with multiplicative interaction terms such as the UNIDIFF model from sociology and the AMMI model from crop science, and many others. Over-parameterized representations of models are used throughout; functions are provided for inference on estimable parameter combinations, as well as standard methods for diagnostics etc.
Diff between gnm versions 0.9-5 dated 2008-06-02 and 0.9-6 dated 2008-10-17
DESCRIPTION | 9 ++---- NAMESPACE | 7 ++-- R/getContrasts.R | 4 +- R/gnm.R | 18 ++++++------ R/pickCoef.R | 2 - inst/NEWS | 9 ++++++ inst/doc/fig-LCall.pdf |only inst/doc/fig-LCover45.pdf |only inst/doc/fig-LCqvplot.pdf |only inst/doc/fig-deaths1921-1940.pdf |only inst/doc/fig-profilePlot.pdf |only inst/doc/gnm.bib |only inst/doc/gnmOverview.Rnw |only inst/doc/gnmOverview.pdf | 57 +++++++++++++++++---------------------- man/gnm-package.Rd | 2 - 15 files changed, 55 insertions(+), 53 deletions(-)