Title: Interface between GRASS 6 geographical information system and R
Diff between spgrass6 versions 0.6-14 dated 2010-01-15 and 0.6-15 dated 2010-01-29
More information about spgrass6 at CRAN
Description: Interpreted interface between GRASS 6 geographical
information system and R, based on starting R from within the
GRASS environment, or running free-standing R in a temporary
GRASS location; the package provides facilities for using all
GRASS commands from the R command line.
Author: Roger Bivand
Maintainer: Roger Bivand
ChangeLog | 7 ++++++-
DESCRIPTION | 8 ++++----
R/bin_link.R | 5 +++--
inst/ChangeLog | 7 ++++++-
4 files changed, 19 insertions(+), 8 deletions(-)
Path: /cran/updated | permanent link
Title: Nonparametric kernel smoothing methods for mixed data types
Diff between np versions 0.30-4 dated 2010-01-28 and 0.30-5 dated 2010-01-29
More information about np at CRAN
Description: This package provides a variety of nonparametric (and
semiparametric) kernel methods that seamlessly handle a mix of
continuous, unordered, and ordered factor data types. We would
like to gratefully acknowledge support from the Natural
Sciences and Engineering Research Council of Canada
(NSERC:www.nserc.ca), the Social Sciences and Humanities
Research Council of Canada (SSHRC:www.sshrc.ca), and the Shared
Hierarchical Academic Research Computing Network
(SHARCNET:www.sharcnet.ca).
Author: Tristen Hayfield
Maintainer: Jeffrey S. Racine
CHANGELOG | 9
DESCRIPTION | 8
NAMESPACE | 7
R/deneqtest.R |only
R/np.cmstest.R | 7
R/np.deneqtest.R |only
R/np.plot.R | 4
R/np.qcmstest.R | 7
R/np.restest.R | 7
R/np.sigtest.R | 8
R/np.singleindex.bw.R | 8
R/np.symtest.R | 20
R/symtest.R | 4
R/zzz.R | 2
inst/doc/np.pdf | 1552 +++++++++++++++++-----------------
inst/doc/np_faq.pdf | 2263 +++++++++++++++++++++++++-------------------------
man/np.deneqtest.Rd |only
man/np.symtest.Rd | 19
18 files changed, 2025 insertions(+), 1900 deletions(-)
Path: /cran/updated | permanent link
Title: AquaEnv - an integrated development toolbox for aquatic chemical
model generation
Diff between AquaEnv versions 0.8-1 dated 2009-11-25 and 0.8-2 dated 2010-01-29
More information about AquaEnv at CRAN
Description: AquaEnv is an integrated development toolbox for aquatic
chemical model generation focused on (ocean) acidification and
CO2 air-water exchange. It contains all elements necessary to
model the pH, the related CO2 air-water exchange, as well as
aquatic acid-base chemistry in general for an arbitrary marine,
estuarine or freshwater system. Also chemical batches can be
modelled. Next to the routines necessary to calculate desired
information, AquaEnv also contains a suite of tools to
visualize this information. Furthermore, AquaEnv can not only
be used to build dynamic models of aquatic systems, but it can
also serve as a simple desktop tool for the experimental
aquatic chemist to generate and visualize all possible derived
information from a set of measurements with one single easy to
use R function. Additionally, the sensitivity of the system to
variations in the input variables can be visualized.
Author: Andreas F. Hofmann, Karline Soetaert, Filip J.R. Meysman
Maintainer: Andreas F. Hofmann
DESCRIPTION | 8
R/aquaenv_public_mainfunctions.R | 2
inst/doc/AquaEnv-ConstantsAndFormulae.pdf | 7845 +++++++++++++++---------------
inst/doc/AquaEnv-ConstantsAndFormulae.tex | 4
inst/doc/AquaEnv-PrivateFunctions.pdf |binary
inst/doc/AquaEnv.pdf | 2634 +++++-----
inst/doc/AquaEnv.tex | 5695 ++++++++++-----------
inst/doc/Rplots.ps |only
8 files changed, 8064 insertions(+), 8124 deletions(-)
Path: /cran/updated | permanent link
Title: A tiff reader for R.
Diff between rtiff versions 1.4 dated 2009-01-22 and 1.4.1 dated 2010-01-29
More information about rtiff at CRAN
Description: This package will read and write TIFF format images and
return them as a pixmap object. Because the resulting object
can be very large for even modestly sized TIFF images, images
can be reduced as they are read for improved performance. This
package is a wrapper around libtiff (www.libtiff.org), on which
it depends (i.e. the libtiff shared library must be on your
PATH for the binary to work, and tiffio.h must be on your
system to build the package from source). By using libtiff's
highlevel TIFFReadRGBAImage function, this package inherently
support a wide range of image formats and compression schemes.
This package also provides an implementation of the Ridler
Autothresholding algorithm for easy generation of binary masks.
Author: Eric Kort
Maintainer: Eric Kort
rtiff-1.4.1/rtiff/DESCRIPTION | 37 ++-
rtiff-1.4.1/rtiff/LICENSE | 52 ++--
rtiff-1.4.1/rtiff/man/autoThreshold.Rd | 7
rtiff-1.4.1/rtiff/man/getDescription.Rd | 11 -
rtiff-1.4.1/rtiff/man/newPixmapRGB.Rd | 3
rtiff-1.4.1/rtiff/man/plot.matrix.Rd | 6
rtiff-1.4.1/rtiff/man/readTiff.Rd | 112 ++++------
rtiff-1.4.1/rtiff/man/rtiff.package.Rd | 2
rtiff-1.4.1/rtiff/man/updateDescription.Rd | 2
rtiff-1.4.1/rtiff/man/writeTiff.Rd | 78 +++----
rtiff-1.4.1/rtiff/src/Makevars.win |only
rtiff-1.4.1/rtiff/src/rtiff.c | 314 +++++++++++++----------------
rtiff-1.4/rtiff/src/tiff.h |only
rtiff-1.4/rtiff/src/tiffconf.h |only
rtiff-1.4/rtiff/src/tiffio.h |only
rtiff-1.4/rtiff/src/tiffvers.h |only
16 files changed, 295 insertions(+), 329 deletions(-)
Path: /cran/updated | permanent link
Title: Object Oriented Statistical Programming
Diff between oosp versions 0.2.3 dated 2009-11-23 and 0.3.1 dated 2010-01-29
More information about oosp at CRAN
Description: A platform and collection of tools for, object oriented
statistical programming, with special emphasis on R (S3)
language extensions, including extensions for environment-based
programming and object-functional programming. Note that many
of the features in this package are experimental.
Author: Charlotte Maia
Maintainer: Charlotte Maia
oosp-0.2.3/oosp/R/class.r |only
oosp-0.2.3/oosp/R/compenv.r |only
oosp-0.2.3/oosp/R/function.r |only
oosp-0.2.3/oosp/R/method.r |only
oosp-0.2.3/oosp/man/clone.compenv.Rd |only
oosp-0.2.3/oosp/man/compenv.Rd |only
oosp-0.2.3/oosp/man/function.Rd |only
oosp-0.2.3/oosp/man/print.compenv.Rd |only
oosp-0.3.1/oosp/DESCRIPTION | 17 -
oosp-0.3.1/oosp/R/ENVIRONMENT.r |only
oosp-0.3.1/oosp/R/FUNCTION.r |only
oosp-0.3.1/oosp/R/function0.r |only
oosp-0.3.1/oosp/R/xclass.r |only
oosp-0.3.1/oosp/R/xcompenv.r |only
oosp-0.3.1/oosp/R/xmethod.r |only
oosp-0.3.1/oosp/inst/doc/Makefile | 2
oosp-0.3.1/oosp/inst/doc/oosp1.pdf |binary
oosp-0.3.1/oosp/inst/doc/oosp1.rnw | 358 +++------------------------
oosp-0.3.1/oosp/inst/doc/oosp2.pdf |binary
oosp-0.3.1/oosp/inst/doc/oosp2.rnw | 402 ++++++++++++++++++++++++++-----
oosp-0.3.1/oosp/inst/doc/oosp3.pdf |binary
oosp-0.3.1/oosp/inst/doc/oosp3.rnw | 123 +++------
oosp-0.3.1/oosp/man/ENVIRONMENT.Rd |only
oosp-0.3.1/oosp/man/FUNCTION.Rd |only
oosp-0.3.1/oosp/man/as.r.default.Rd | 4
oosp-0.3.1/oosp/man/clone.ENVIRONMENT.Rd |only
oosp-0.3.1/oosp/man/component.Rd | 2
oosp-0.3.1/oosp/man/freemethod.Rd | 11
oosp-0.3.1/oosp/man/function0.Rd |only
oosp-0.3.1/oosp/man/list.to.compenv.Rd | 8
oosp-0.3.1/oosp/man/misc.Rd | 6
oosp-0.3.1/oosp/man/mobject.Rd | 17 -
oosp-0.3.1/oosp/man/object.Rd | 2
oosp-0.3.1/oosp/man/pointer.Rd | 12
oosp-0.3.1/oosp/man/preview.Rd | 2
oosp-0.3.1/oosp/man/print.ENVIRONMENT.Rd |only
oosp-0.3.1/oosp/man/trim.Rd | 3
37 files changed, 474 insertions(+), 495 deletions(-)
Path: /cran/updated | permanent link
More information about phyclust at CRAN
Path: /cran/new | permanent link
Title: Power analysis for random effects in mixed models
Diff between pamm versions 0.5 dated 2009-10-04 and 0.6 dated 2010-01-29
More information about pamm at CRAN
Description: Simulation functions to assess or explore the power of a
dataset to estimates significant random effects (intercept or
slope) in a mixed model. The functions are based on the "lme4"
package.
Author: Julien Martin
Maintainer: Julien Martin
DESCRIPTION | 8 ++---
R/EAMM.R | 23 +++++++++++----
R/PAMM.R | 57 +++++++++++++++++++++++++++++----------
R/SSF.R | 24 +++++++++++-----
man/EAMM.Rd | 72 +++++++++++++++++++++++++++++++++++--------------
man/PAMM.Rd | 63 +++++++++++++++++++++++++++++--------------
man/SSF.Rd | 75 +++++++++++++++++++++++++++++++++-------------------
man/pamm-package.Rd | 39 ++++++++++++++++-----------
man/plot.EAMM.Rd | 30 ++++++++++----------
man/plot.PAMM.Rd | 37 +++++++++++++------------
man/plot.SSF.Rd | 19 ++++++-------
11 files changed, 290 insertions(+), 157 deletions(-)
Path: /cran/updated | permanent link
Title: Mapping, pruning, and graphing tree models
Diff between maptree versions 1.4-5 dated 2009-01-27 and 1.4-6 dated 2010-01-29
More information about maptree at CRAN
Description: Functions with example data for graphing, pruning, and
mapping models from hierarchical clustering, and classification
and regression trees.
Author: Denis White
Maintainer: Denis White
DESCRIPTION | 13 ++++++++-----
R/maptree.R | 52 ++++++++++++++++++++++++----------------------------
inst/README | 9 +++++++++
man/draw.clust.Rd | 5 ++---
4 files changed, 43 insertions(+), 36 deletions(-)
Path: /cran/updated | permanent link
Title: Kernel smoothing
Diff between ks versions 1.6.8 dated 2009-10-16 and 1.6.9 dated 2010-01-29
More information about ks at CRAN
Description: Kernel density estimators and kernel discriminant analysis
for multivariate data
Author: Tarn Duong
Maintainer: Tarn Duong
DESCRIPTION | 8
R/kda.R | 21 -
R/kdde.R | 227 +++++++++++++++++++--
R/kde.R | 545 +++++++++++++++++++++++++++++----------------------
R/mise.R | 8
R/normal.R | 101 ++++++++-
R/selector.R | 177 ++++++++++++----
README | 13 -
inst/doc/kde.pdf |binary
man/Hscv.Rd | 5
man/contourLevels.Rd | 11 -
man/ks-package.Rd | 14 -
man/plot.kda.kde.Rd | 7
man/plot.kde.Rd | 20 +
man/plotmixt.Rd | 3
15 files changed, 809 insertions(+), 351 deletions(-)
Path: /cran/updated | permanent link
Title: Various R programming tools for data manipulation
Diff between gdata versions 2.7.0 dated 2010-01-26 and 2.7.1 dated 2010-01-29
More information about gdata at CRAN
Description: Various R programming tools for data manipulation
Author: Gregory R. Warnes, with contributions from Ben Bolker, Gregor
Gorjanc, Gabor Grothendieck, Ales Korosec, Thomas Lumley, Don
MacQueen, Arni Magnusson, Jim Rogers, and others
Maintainer: Gregory Warnes
ChangeLog | 32 ++++
DESCRIPTION | 8 -
NEWS | 8 +
R/xls2sep.R | 3
inst/ChangeLog | 32 ++++
inst/NEWS | 8 +
inst/doc/mapLevels.pdf |binary
inst/doc/unknown.pdf |binary
inst/perl/darwin-2level/perllocal.pod | 266 ----------------------------------
src/Makefile | 1
src/Makefile.win |only
src/build.bat |only
12 files changed, 88 insertions(+), 270 deletions(-)
Path: /cran/updated | permanent link
More information about fftw at CRAN
Path: /cran/new | permanent link
Title: Epidemiological calculator
Diff between epicalc versions 2.10.1.0 dated 2010-01-18 and 2.10.1.1 dated 2010-01-29
More information about epicalc at CRAN
Description: Functions making R easy for epidemiological calculation.
Author: Virasakdi Chongsuvivatwong
Maintainer: Virasakdi Chongsuvivatwong
DESCRIPTION | 8 ++++----
R/epicalc.R | 8 ++++----
2 files changed, 8 insertions(+), 8 deletions(-)
Path: /cran/updated | permanent link
Title: Dendrochronology Program Library in R
Diff between dplR versions 1.2.5 dated 2010-01-26 and 1.2.6 dated 2010-01-29
More information about dplR at CRAN
Description: This package contains functions for performing some
standard tree-ring analyses.
Author: Andy Bunn with contributions from Franco Biondi and Mikko
Korpela
Maintainer: Andy Bunn
DESCRIPTION | 8 ++++----
man/cms.Rd | 2 +-
man/ffcsaps.Rd | 2 +-
man/rcs.Rd | 2 +-
4 files changed, 7 insertions(+), 7 deletions(-)
Path: /cran/updated | permanent link
Title: R MPFR - Multiple Precision Floating-Point Reliable
Diff between Rmpfr versions 0.1-7 dated 2009-09-07 and 0.2-3 dated 2010-01-29
More information about Rmpfr at CRAN
Description: The package aims at providing S4 classes and methods for
arithmetic including transcendental ("special") functions for
arbitrary precision floating point numbers. To this end, it
interfaces to the LGPL'ed MPFR (Multiple Precision
Floating-Point Reliable) Library which itself is based on the
GMP (GNU Multiple Precision) Library.
Author: Martin Maechler
Maintainer: Martin Maechler
ChangeLog | 105 ++++++++++++++++++
DESCRIPTION | 12 +-
Done | 12 ++
R/Arith.R | 4
R/Consts.R | 5
R/Math.R | 15 +-
R/array.R | 242 +++++++++++++++++++++++++------------------
R/as.R | 81 ++++++++------
R/mpfr.R | 74 +++++++++----
R/special-fun.R | 134 ++++++++++++++++-------
TODO | 11 -
man/Mnumber-class.Rd | 16 ++
man/array_or_vector-class.Rd | 21 +--
man/formatMpfr.Rd | 9 +
man/mpfr-class.Rd | 28 ++++
man/mpfr-utils.Rd | 10 +
man/mpfr.Rd | 41 +++++++
man/mpfrArray.Rd | 10 +
man/mpfrMatrix-class.Rd | 75 ++++++++++++-
man/utils.Rd | 3
src/Makevars | 2
src/Makevars.in | 2
src/Makevars.win | 4
src/Rmpfr_utils.h | 12 +-
src/convert.c | 67 ++++++++---
src/init.c | 12 +-
src/utils.c | 72 ++++++++++++
tests/arith-ex.R | 4
tests/create.R | 29 +++--
tests/matrix-ex.R | 47 +++++---
tests/special-fun-ex.R | 43 +++++++
31 files changed, 901 insertions(+), 301 deletions(-)
Path: /cran/updated | permanent link
Title: Non-clustered heatmap alternatives
Diff between NeatMap versions 0.3.2 dated 2010-01-04 and 0.3.3 dated 2010-01-29
More information about NeatMap at CRAN
Description: NeatMap is a package to create heatmap like plots in 2 and
3 dimensions, without the need for cluster analysis. Like the
heatmap, the plots created by NeatMap display both a
dimensionally reduced representation of the data as well as the
data itself. They are intended to be used in conjunction with
dimensional reduction techniques such as PCA.
Author: Satwik Rajaram and Yoshi Oono
Maintainer: Satwik Rajaram
DESCRIPTION | 8 ++++----
R/Heatmap1.R | 7 ++++++-
2 files changed, 10 insertions(+), 5 deletions(-)
Path: /cran/updated | permanent link