CRANberries

CRANberries aggregates information about new and and updated packages from the
CRAN network for R available as this html version and a corresponding RSS feed.
Created and provided by Dirk Eddelbuettel.

Thu, 04 Feb 2010

New package ipw with initial version 1.0
Package: ipw
Version: 1.0
Date: 2010-02-04
Title: Estimate inverse probability weights.
Author: Willem M. van der Wal
Maintainer: Willem M. van der Wal
Depends: R (>= 2.0.1), boot, geepack, MASS, nlme, nnet, survival
Description: Estimate inverse probability weights. These are typically used to perform inverse probability weighting (IPW) to fit a marginal structural model (MSM), to estimate causal effects from observational data. Both data from point treatment situations and longitudinal studies can be used.
Encoding: latin1
License: GPL (>= 2)
Packaged: 2010-02-04 18:25:23 UTC; wwal
Repository: CRAN
Date/Publication: 2010-02-04 19:40:55

More information about ipw at CRAN
Path: /cran/new | permanent link

Package Matrix updated to version 0.999375-36 with previous version 0.999375-35 dated 2010-02-03

Title: Sparse and Dense Matrix Classes and Methods
Description: Classes and methods for dense and sparse matrices and operations on them using Lapack and SuiteSparse.
Author: Douglas Bates and Martin Maechler
Maintainer: Doug and Martin

Diff between Matrix versions 0.999375-35 dated 2010-02-03 and 0.999375-36 dated 2010-02-04

 ChangeLog                  |   15 +
 DESCRIPTION                |    8 
 R/Csparse.R                |   10 
 inst/doc/Comparisons.pdf   |binary
 inst/doc/Design-issues.pdf |binary
 inst/doc/Intro2Matrix.pdf  |  593 ++++++++++++++++++++++-----------------------
 inst/doc/Introduction.pdf  |binary
 inst/doc/sparseModels.pdf  |  258 +++++++++----------
 tests/indexing.R           |    9 
 tests/indexing.Rout.save   |   16 -
 10 files changed, 461 insertions(+), 448 deletions(-)

More information about Matrix at CRAN
Path: /cran/updated | permanent link

Package micEconAids updated to version 0.6-2 with previous version 0.6-0 dated 2009-12-28

Title: Demand Analysis with the Almost Ideal Demand System (AIDS)
Description: Demand analysis with the Almost Ideal Demand System (AIDS) suggested by Deaton and Muellbauer (1980)
Author: Arne Henningsen
Maintainer: Arne Henningsen

Diff between micEconAids versions 0.6-0 dated 2009-12-28 and 0.6-2 dated 2010-02-04

 DESCRIPTION     |    8 ++++----
 NEWS            |only
 R/aidsElas.R    |    5 +++++
 man/aidsElas.Rd |    9 +++++++++
 4 files changed, 18 insertions(+), 4 deletions(-)

More information about micEconAids at CRAN
Path: /cran/updated | permanent link

Package dtw updated to version 1.14-3 with previous version 1.14-1 dated 2009-08-14

Title: Dynamic Time Warping algorithms
Description: Comprehensive implementation of Dynamic Time Warping algorithms in R. DTW finds the optimal (least cumulative distance) mapping between two time series. All common DTW variants are covered, including local and global constraints, arbitrary timeseries lenghts, distance definitions, MVM, etc. Package computes cumulative distance, warping functions, plots, normalizations, etc.
Author: Toni Giorgino ,
Maintainer: Toni Giorgino

Diff between dtw versions 1.14-1 dated 2009-08-14 and 1.14-3 dated 2010-02-04

 DESCRIPTION        |    6 +++---
 R/zzz.R            |    2 +-
 inst/CITATION      |    9 +++++----
 inst/ChangeLog     |    6 ++++++
 inst/doc/dtw.Rnw   |    2 +-
 inst/doc/dtw.pdf   |binary
 man/dtw-package.Rd |    2 +-
 man/dtw.Rd         |    8 ++++----
 man/dtwDist.Rd     |    8 ++++----
 9 files changed, 25 insertions(+), 18 deletions(-)

More information about dtw at CRAN
Path: /cran/updated | permanent link

Package R2jags updated to version 0.02-01 with previous version 0.01-30.01 dated 2009-12-22

Title: A Package for Running jags from R
Description: Using this package to call jags from R.
Author: Yu-Sung Su , Masanao Yajima ,
Maintainer: Yu-Sung Su

Diff between R2jags versions 0.01-30.01 dated 2009-12-22 and 0.02-01 dated 2010-02-04

 CHANGELOG          |    6 ++++++
 DESCRIPTION        |    8 ++++----
 R/as.bugs.array2.R |   14 +++++++-------
 R/jags.sims.R      |    4 +---
 R/jags2.R          |   13 +++++++++----
 R/mcmc2bugs.R      |    2 +-
 6 files changed, 28 insertions(+), 19 deletions(-)

More information about R2jags at CRAN
Path: /cran/updated | permanent link

Package trio updated to version 1.0.7 with previous version 1.0.4 dated 2010-02-03

Title: Processing and Simulating Genotype Data for Trio Logic Regression
Description: Set up matched case-pseudo controls genotypes data for trios in order to run trio logic regreesion, to impute missing genotypes in trios, or to simulate case-parent trios with disease risk dependent on SNP-SNP interaction. This package furthermore contains functions for computing the values of pairwise LD measures and for identifying LD blocks.
Author: Qing Li, Holger Schwender
Maintainer: Qing Li

Diff between trio versions 1.0.4 dated 2010-02-03 and 1.0.7 dated 2010-02-04

 trio-1.0.4/trio/INDEX                |only
 trio-1.0.4/trio/man/simuBkMap.Rd     |only
 trio-1.0.4/trio/man/step3way.Rd      |only
 trio-1.0.4/trio/man/trio.gen.err.Rd  |only
 trio-1.0.4/trio/man/trio.gen2.Rd     |only
 trio-1.0.4/trio/man/trio.ped.err.Rd  |only
 trio-1.0.4/trio/man/trio.ped1.Rd     |only
 trio-1.0.4/trio/man/trio.ped2.Rd     |only
 trio-1.0.7/trio/DESCRIPTION          |    8 +-
 trio-1.0.7/trio/data/LDdata.RData    |only
 trio-1.0.7/trio/inst/doc/figure1.eps |only
 trio-1.0.7/trio/inst/doc/figure1.png |only
 trio-1.0.7/trio/inst/doc/figure2.eps |only
 trio-1.0.7/trio/inst/doc/figure2.png |only
 trio-1.0.7/trio/inst/doc/figure3.eps |only
 trio-1.0.7/trio/inst/doc/figure3.png |only
 trio-1.0.7/trio/inst/doc/trio.Rnw    |  116 +++++++++++++++++++++++++++++++++--
 trio-1.0.7/trio/inst/doc/trio.pdf    |binary
 trio-1.0.7/trio/man/LDdata.Rd        |only
 trio-1.0.7/trio/man/freq.hap.Rd      |   14 ++--
 trio-1.0.7/trio/man/trio.gen1.Rd     |   29 ++++++--
 21 files changed, 147 insertions(+), 20 deletions(-)

More information about trio at CRAN
Path: /cran/updated | permanent link

New package powerMediation with initial version 0.0.6
Package: powerMediation
Version: 0.0.6
Date: 2010-02-03
Title: Power/Sample size calculation for mediation analysis
Author: Weiliang Qiu
Maintainer: Weiliang Qiu
Depends: R (>= 2.9.0), stats
Description: The package contains functions for calculating power, sample size, and minimal detectable mediation effect for testing mediation effect (Sobel's test) of a simple mediation model with continuous response, and only one predictor and only one mediator. The package also contains functions for calculating power, sample size, and minimal detectable slope for testing the slope in a simple linear regression (only one predictor).
License: GPL (>= 2)
Repository: CRAN
Packaged: 2010-02-04 02:52:35 UTC; stwxq
Date/Publication: 2010-02-04 08:46:56

More information about powerMediation at CRAN
Path: /cran/new | permanent link

Package matrixStats updated to version 0.1.9 with previous version 0.1.8 dated 2009-11-13

Title: Methods that apply to rows and columns of a matrix
Description: This packages provides methods operating on rows and columns of matrices. The methods are optimized for speed and memory. This package is currently in a beta phase. Make sure to read the 'Roadmap' section in the package help.
Author: Henrik Bengtsson (partly by Robert Gentleman)
Maintainer: Henrik Bengtsson

Diff between matrixStats versions 0.1.8 dated 2009-11-13 and 0.1.9 dated 2010-02-04

 DESCRIPTION                 |    8 ++--
 R/rowWeightedMeans.matrix.R |   76 ++++++++++++++++++++++++++++++++++++++------
 inst/NEWS                   |    8 ++++
 tests/rowWeightedMeans.R    |only
 tests/rowWeightedMedians.R  |only
 5 files changed, 77 insertions(+), 15 deletions(-)

More information about matrixStats at CRAN
Path: /cran/updated | permanent link

Package R.utils updated to version 1.3.3 with previous version 1.3.2 dated 2010-01-22

Title: Various programming utilities
Description: This package provides utility classes and methods useful when programming in R and developing R packages.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson

Diff between R.utils versions 1.3.2 dated 2010-01-22 and 1.3.3 dated 2010-02-04

 DESCRIPTION   |    8 ++++----
 R/Arguments.R |   33 +++++++++++++++++++++++++++++----
 inst/NEWS     |    4 ++++
 3 files changed, 37 insertions(+), 8 deletions(-)

More information about R.utils at CRAN
Path: /cran/updated | permanent link

New package MAc with initial version 1.0
Package: MAc
Type: Package
Title: Meta-Analysis for Correlations
Version: 1.0
Date: 2010-02-01
Author: AC Del Re & William T. Hoyt
Maintainer: AC Del Re
Description: This is an integrated package for conducting all required steps in a meta-analysis with correlations. It uses recommended procedures as described in Cooper, Hedges, & Valentine's Handbook of Research Synthesis and Meta-Analysis (2009).
Depends: R (>= 2.10.1), plyr, ggplot2, psych
License: GPL-2
Packaged: 2010-02-04 04:06:28 UTC; User
Repository: CRAN
Date/Publication: 2010-02-04 08:46:28

More information about MAc at CRAN
Path: /cran/new | permanent link

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