More information about saws at CRAN
Path: /cran/new | permanent link
Title: Modelling and analysis of real-time PCR data
Diff between qpcR versions 1.2-5 dated 2010-02-19 and 1.2-6 dated 2010-03-01
More information about qpcR at CRAN
Description: Model fitting, optimal model selection and calculation of
various features that are essential in the analysis of
quantitative real-time polymerase chain reaction (qPCR).
Author: Andrej-Nikolai Spiess
Maintainer: Andrej-Nikolai Spiess
DESCRIPTION | 8 +--
R/propagate.R | 135 +++++++++++++++++++++++++++++++------------------------
R/ratiocalc.r | 7 +-
man/propagate.Rd | 95 ++++++++++++++++----------------------
man/ratiocalc.Rd | 67 ++++++++-------------------
5 files changed, 148 insertions(+), 164 deletions(-)
Path: /cran/updated | permanent link
Title: CShapes Dataset and Utilities
Diff between cshapes versions 0.2-2 dated 2010-01-28 and 0.2-3 dated 2010-03-01
More information about cshapes at CRAN
Description: Package for CShapes, a GIS dataset of country boundaries
(1946-2008). Includes functions for data extraction and the
computation of weights matrices.
Author: Nils B. Weidmann
Maintainer: Nils B. Weidmann
ChangeLog | 4 ++++
DESCRIPTION | 10 +++++-----
R/cshp.R | 12 +++++++++---
inst/shp/cshapes.dbf |binary
inst/shp/cshapes_shapefile_documentation.txt | 5 ++---
man/cshp.Rd | 6 ++++--
6 files changed, 24 insertions(+), 13 deletions(-)
Path: /cran/updated | permanent link
Title: Classification and Regression Training
Diff between caret versions 4.31 dated 2009-12-09 and 4.33 dated 2010-03-01
More information about caret at CRAN
Description: Misc functions for training and plotting classification
and regression models
Author: Max Kuhn. Contributions from Jed Wing, Steve Weston, Andre
Williams, Chris Keefer and Allan Engelhardt
Maintainer: Max Kuhn
caret-4.31/caret/inst/doc/caretMisc.tex |only
caret-4.31/caret/inst/doc/caretSelection.tex |only
caret-4.31/caret/inst/doc/caretTrain.tex |only
caret-4.31/caret/inst/doc/caretVarImp.tex |only
caret-4.33/caret/DESCRIPTION | 13
caret-4.33/caret/R/createGrid.R | 19
caret-4.33/caret/R/createModel.R | 75
caret-4.33/caret/R/makeCubistFiles.R |only
caret-4.33/caret/R/misc.R | 43
caret-4.33/caret/R/predictionFunction.R | 14
caret-4.33/caret/R/probFunction.R | 19
caret-4.33/caret/R/roc.R | 24
caret-4.33/caret/R/rocPoint.R | 28
caret-4.33/caret/R/selectByFilter.R | 4
caret-4.33/caret/R/selection.R | 7
caret-4.33/caret/R/train.default.R | 2
caret-4.33/caret/inst/NEWS | 19
caret-4.33/caret/inst/doc/caretMisc.pdf | 773 ++++----
caret-4.33/caret/inst/doc/caretSelection.Rnw | 117 +
caret-4.33/caret/inst/doc/caretSelection.pdf | 2522 +++++++++++++++------------
caret-4.33/caret/inst/doc/caretTrain.Rnw | 13
caret-4.33/caret/inst/doc/caretTrain.pdf |binary
caret-4.33/caret/inst/doc/caretVarImp.pdf | 305 +--
caret-4.33/caret/man/roc.Rd | 5
caret-4.33/caret/man/train.Rd | 35
25 files changed, 2308 insertions(+), 1729 deletions(-)
Path: /cran/updated | permanent link
Title: William and Mary Parser For Bruker-Ultraflex Mass Spec Data
Diff between WMBrukerParser versions 1.1 dated 2009-12-23 and 1.2 dated 2010-03-01
More information about WMBrukerParser at CRAN
Description: The package parses Bruker Ultraflex TOF mass spectrometry
data and experimental parameter files into R structures for
further signal processing and statistical analysis.
Author: William Cooke, Maureen Tracy and Dariya Malyarenko
Maintainer: William Cooke
DESCRIPTION | 8 ++--
R/BrukerParser.R | 8 +++-
inst/Examples/OptionsAndParametersParse1Run.txt | 30 ++++++++---------
inst/Examples/OptionsAndParametersParseAndCat2Runs.txt | 30 ++++++++---------
man/BrukerParser.Rd | 8 ++--
man/ParseAndSave.Rd | 24 ++++++-------
man/ParserParams.Rd | 30 ++++++++---------
man/WMBrukerParser-package.Rd | 4 +-
man/tofListMetaData.Rd | 2 -
9 files changed, 75 insertions(+), 69 deletions(-)
Path: /cran/updated | permanent link
Title: Utilities for Sweave together with TeX listings package
Diff between SweaveListingUtils versions 0.4 dated 2009-11-03 and 0.4.3 dated 2010-03-01
More information about SweaveListingUtils at CRAN
Description: provides utilities for defining R / Rd as
Tex-package-listings "language" and including R / Rd source
file (sniplets) copied from R-forge in its most recent version
(or another url) thereby avoiding inconsistencies between
vignette and documented source code
Author: Peter Ruckdeschel
Maintainer: Peter Ruckdeschel
DESCRIPTION | 14
R/SweaveListingUtils.R | 13
inst/TeX/Rdlisting.sty | 8
inst/doc/ExampleSweaveListingUtils.Rnw | 21 -
inst/doc/ExampleSweaveListingUtils.pdf |binary
man/0SweaveListingUtils-package.Rd | 6
man/copySourceFromRForge.Rd | 11
man/lstinputSourceFromRForge.Rd | 26 +
man/lstset.Rd | 20 -
man/setToBeDefinedPkgs.Rd | 2
tests/Examples/SweaveListingUtils-Ex.Rout.save | 364 ++++++++++---------------
11 files changed, 223 insertions(+), 262 deletions(-)
Path: /cran/updated | permanent link
Title: Black-Litterman and copula-opinion pooling frameworks
Diff between BLCOP versions 0.2.2 dated 2008-08-20 and 0.2.4 dated 2010-03-01
More information about BLCOP at CRAN
Description: An implementation of the Black-Litterman Model and Atilio
Meucci's copula opinion pooling framework. This should be
regarded as a beta release.
Author: Francisco Gochez
Maintainer: Mango Solutions
DESCRIPTION | 32
NAMESPACE | 6
NEWS |only
R/BLAnalyzePost.r | 72
R/BLPost.r | 60
R/densityPlots.r | 42
R/extractreplace.r | 36
R/methods.R | 15
R/portfolioopt.R |only
R/unittests.r | 68
inst/RUnit/copexample.RData |only
inst/RUnit/copexample2.RData |only
inst/RUnit/runit.BLPosterior.R | 60
inst/RUnit/runit.COPPosterior.r | 38
inst/RUnit/runit.buildviews.R | 5
inst/RUnit/runit.portfolioopt.R |only
inst/RUnit/runit.showmethods.R |only
inst/doc/BLCOP.Rnw | 68
inst/doc/BLCOP.pdf | 5006 +++++++++++++++++++++-------------------
inst/doc/Rplots.pdf | 3827 +++++++++++++++++-------------
man/BLPosterior.Rd | 14
man/BLResult-class.Rd | 10
man/BLViews-class.Rd | 3
man/COPResult-class.Rd | 15
man/COPViews-class.Rd | 5
man/addBLViews.Rd | 45
man/assetSet.Rd | 19
man/mvdistribution.Rd | 16
man/optimalPortfolios.Rd | 96
man/posteriorFeasibility.Rd | 4
man/replacers.Rd | 26
man/runBLCOPTestSuite.Rd | 15
32 files changed, 5273 insertions(+), 4330 deletions(-)
Path: /cran/updated | permanent link
Title: Model-Based Boosting
Diff between mboost versions 2.0-0 dated 2010-02-01 and 2.0-1 dated 2010-03-01
More information about mboost at CRAN
Description: Functional gradient descent algorithm (boosting) for
optimizing general risk functions utilizing component-wise
(penalised) least squares estimates or regression trees as
base-learners for fitting generalized linear, additive and
interaction models to potentially high-dimensional data.
Author: Torsten Hothorn, Peter Buehlmann, Thomas Kneib, Matthias Schmid
and Benjamin Hofner
Maintainer: Torsten Hothorn
DESCRIPTION | 8 +--
NEWS | 5 ++
R/bl.R | 75 +++++++++++++++++++++++++-----------
R/btree.R | 20 ++++++---
R/mboost.R | 10 ++--
inst/CHANGES | 5 ++
inst/doc/SurvivalEnsembles.pdf |binary
inst/doc/mboost_illustrations.pdf |binary
man/mboost_package.Rd | 24 +++++------
tests/Examples/mboost-Ex.Rout.save | 10 ++--
tests/bugfixes.R | 18 ++++++--
tests/bugfixes.Rout.save | 20 +++++++--
tests/regtest-baselearner.Rout.save | 2
13 files changed, 134 insertions(+), 63 deletions(-)
Path: /cran/updated | permanent link
Title: Statistical tools for the interpretation of forensic DNA
mixtures
Diff between forensim versions 1.1-3 dated 2009-12-18 and 1.1-4 dated 2010-03-01
More information about forensim at CRAN
Description: Statistical methods and simulation tools for the
interpretation of forensic DNA mixtures
Author: Hinda Haned
Maintainer: Hinda Haned
DESCRIPTION | 12 +++++++-----
R/DNAproxy.R |only
R/PV.R |only
R/recordDrop.R |only
R/recordHeights.R |only
R/simMixSNP.R |only
R/tabDNAproxy.R |only
R/tabSPH.R |only
R/wrapdataL.R |only
R/zzz.R | 2 +-
data/dropdata.rdata |only
man/DNAproxy.Rd |only
man/PV.Rd |only
man/dropdata.Rd |only
man/recordDrop.Rd |only
man/recordHeights.Rd |only
man/simMixSNP.Rd |only
man/tabDNAproxy.Rd |only
man/tabSPH.Rd |only
man/wrapdataL.Rd |only
20 files changed, 8 insertions(+), 6 deletions(-)
Path: /cran/updated | permanent link
More information about r2lh at CRAN
Path: /cran/new | permanent link
Title: K-Means for Longitudinal Data (KmL)
Diff between kml versions 1.1 dated 2010-02-18 and 1.1.1 dated 2010-03-01
More information about kml at CRAN
Description: KmL is an implementation of k-means specificaly design to
deal with longitudinal data. It provide facilities to deal with
missing value and propose a graphical interphace for chosing
the correct number of clusters.
Author: Christophe Genolini
Maintainer: Christophe Genolini
DESCRIPTION | 8 ++++----
NAMESPACE | 2 +-
R/clusterizLongData.r | 8 ++++----
man/kml-package.Rd | 4 ++--
man/plotAllCriterion.Rd |only
5 files changed, 11 insertions(+), 11 deletions(-)
Path: /cran/updated | permanent link
Title: A Tcl/Tk GUI for the functions in the ca package
Diff between caGUI versions 0.1-2 dated 2009-11-23 and 0.1-3 dated 2010-03-01
More information about caGUI at CRAN
Description: A Graphical User Interface (GUI) for computation and
visualization of simple, multiple and joint correspondence
analysis with the ca package.
Author: Angelos Markos
Maintainer: Angelos Markos
DESCRIPTION | 8 ++---
R/caGUI.r | 81 +++++++++++++++++-----------------------------------------
statcount.gif |only
3 files changed, 29 insertions(+), 60 deletions(-)
Path: /cran/updated | permanent link
Title: VAR Modelling
Diff between vars versions 1.4-6 dated 2009-08-07 and 1.4-7 dated 2010-03-01
More information about vars at CRAN
Description: Estimation, lag selection, diagnostic testing,
forecasting, causality analysis, forecast error variance
decomposition and impulse response functions of VAR models and
estimation of SVAR/SVEC models.
Author: Bernhard Pfaff
Maintainer: Bernhard Pfaff
DESCRIPTION | 13 +++---
NAMESPACE | 15 ++++++
R/causality.R | 117 ++++++++++++++++++++++++++++++++++++------------------
R/toMlm.R |only
inst/ChangeLog | 8 +++
inst/doc/vars.pdf |binary
man/causality.Rd | 37 ++++++++++++++---
man/summary.Rd | 17 +++++--
tests |only
9 files changed, 151 insertions(+), 56 deletions(-)
Path: /cran/updated | permanent link
More information about random.polychor.pa at CRAN
Path: /cran/new | permanent link
Title: Multivariate partitioning
Diff between mvpart versions 1.3-0 dated 2010-02-06 and 1.3-1 dated 2010-03-01
More information about mvpart at CRAN
Description: Multivariate regression trees
Author: rpart by Terry M Therneau and Beth Atkinson
Maintainer: Glenn De'ath
Changelog | 4 +++-
DESCRIPTION | 6 +++---
R/formatg.R | 2 +-
3 files changed, 7 insertions(+), 5 deletions(-)
Path: /cran/updated | permanent link
Title: The Variance Gamma Distribution
Diff between VarianceGamma versions 0.2-1 dated 2009-10-28 and 0.3-0 dated 2010-03-01
More information about VarianceGamma at CRAN
Description: This package provides functions for the variance gamma
distributions. Density, distribution and quantile functions.
Functions for random number generation and fitting of the
variance gamma to data. Also, functions for computing moments
of the variance gamma distribution of any order about any
location. In addition, there are functions for checking the
validity of parameters and to interchange different sets of
parameterizatons for the variance gamma distribution.
Author: David Scott
Maintainer: David Scott
VarianceGamma-0.2-1/VarianceGamma/tests/runitvgMoments.R |only
VarianceGamma-0.3-0/VarianceGamma/ChangeLog | 7 ++
VarianceGamma-0.3-0/VarianceGamma/DESCRIPTION | 12 +---
VarianceGamma-0.3-0/VarianceGamma/NAMESPACE | 17 +++---
VarianceGamma-0.3-0/VarianceGamma/R/vgFitStart.R | 6 +-
VarianceGamma-0.3-0/VarianceGamma/inst |only
VarianceGamma-0.3-0/VarianceGamma/man/VarianceGamma.Rd | 38 +++++++--------
VarianceGamma-0.3-0/VarianceGamma/man/vgFit.Rd | 4 -
VarianceGamma-0.3-0/VarianceGamma/man/vgFitStart.Rd | 2
VarianceGamma-0.3-0/VarianceGamma/man/vgMom.Rd | 16 +++---
VarianceGamma-0.3-0/VarianceGamma/tests/doRUnit.R |only
VarianceGamma-0.3-0/VarianceGamma/tests/runTests |only
VarianceGamma-0.3-0/VarianceGamma/tests/testFunction |only
13 files changed, 55 insertions(+), 47 deletions(-)
Path: /cran/updated | permanent link
Title: The Skew Hyperbolic Student t-distribution
Diff between SkewHyperbolic versions 0.1-2 dated 2009-10-28 and 0.2-0 dated 2010-03-01
More information about SkewHyperbolic at CRAN
Description: Functions are provided for the density function,
distribution function, quantiles and random number generation
for the skew hyperbolic t-distribution. There are also
functions that fit the distribution to data. There are
functions for the mean, variance, skewness, kurtosis and mode
of a given distribution and to calculate moments of any order
about any centre. To assess goodness of fit, there are
functions to generate a Q-Q plot and a P-P plot.
Author: David Scott
Maintainer: David Scott
ChangeLog | 19 ++++++
DESCRIPTION | 12 +--
NAMESPACE | 18 +++--
R/dskewhyp.R | 118 ++++++++++++++++++++------------------
R/plot.skewhypFit.R | 41 +++++++------
R/qqskewhyp.R | 11 +--
R/skewhypCheckPars.R | 8 +-
data/ais.R |only
inst |only
man/SkewHyperbolicDistribution.Rd | 15 ++--
man/ais.Rd |only
man/skewhypFit.Rd | 4 -
man/skewhypMom.Rd | 18 ++---
tests |only
14 files changed, 150 insertions(+), 114 deletions(-)
Path: /cran/updated | permanent link
Title: Meta-Analysis with Correlations (MAc) Rcmdr Plug-in
Diff between RcmdrPlugin.MAc versions 1.0.4 dated 2010-02-22 and 1.0.5 dated 2010-03-01
More information about RcmdrPlugin.MAc at CRAN
Description: This is an R-Commander plug-in for the MAc package
(Meta-Analysis with Correlations). This package enables the
user to conduct a meta-analysis in a menu-driven, graphical
user interface environment (e.g., SPSS), while having the full
statistical capabilities of R and the MAc package. The MAc
package itself contains a variety of useful functions for
conducting a research synthesis with correlational data. One of
the unique features of the MAc package is in its integration of
user-friendly functions to complete all statistical steps
involved in a meta-analysis with correlations. It uses
recommended procedures as described in The Handbook of Research
Synthesis and Meta-Analysis (Cooper, Hedges, & Valentine,
2009).
Author: AC Del Re & William T. Hoyt
Maintainer: AC Del Re
.Rd2dvi5756 |only
DESCRIPTION | 10 +++---
R/RcmdrPlugin.R | 29 +++++++++--------
inst/etc/menus.txt | 4 +-
man/RcmdrPlugin.MAc-package.Rd | 68 ++++++++++++++++++++++++-----------------
5 files changed, 63 insertions(+), 48 deletions(-)
Path: /cran/updated | permanent link
Title: Meta-Analysis with Correlations
Diff between MAc versions 1.0.4 dated 2010-02-21 and 1.0.5 dated 2010-03-01
More information about MAc at CRAN
Description: This is an integrated meta-analysis package for conducting
a research synthesis with correlational data. One of the unique
features of this package is in its integration of user-friendly
functions to complete all statistical steps involved in a
meta-analysis with correlations. It uses recommended procedures
as described in The Handbook of Research Synthesis and
Meta-Analysis (Cooper, Hedges, & Valentine, 2009).
Author: AC Del Re & William T. Hoyt
Maintainer: AC Del Re
DESCRIPTION | 8 +-
R/MAc.R | 200 ++++++++++++++++++++++++++++++++++-------------------
man/CatMod.Rd | 2
man/CatModf.Rd | 79 +-------------------
man/ComplData.Rd | 4 -
man/MAc-package.Rd | 6 -
man/wifun.Rd |only
7 files changed, 145 insertions(+), 154 deletions(-)
Path: /cran/updated | permanent link
More information about GeneralizedHyperbolic at CRAN
Path: /cran/new | permanent link
More information about DistributionUtils at CRAN
Path: /cran/new | permanent link