Title: Easier cluster computing (based on snow).
Diff between snowfall versions 1.70 dated 2008-12-30 and 1.83 dated 2010-03-04
More information about snowfall at CRAN
Description: Usability wrapper around snow for easier development of
parallel R programs. This package offers e.g. extended error
checks, and additional functions. All functions work in
sequential mode, too, if no cluster is present or wished.
Package is also designed as connector to the cluster management
tool sfCluster, but can also used without it.
Author: Jochen Knaus
Maintainer: Jochen Knaus
DESCRIPTION | 19 +-
NAMESPACE | 1
NEWS |only
R/clusterFunctions.R | 376 ++++++++++++++++++++++++++++--------------
R/init.R | 264 ++++++++++++++---------------
R/snowWrappers.R | 8
R/snowfall-internal.R | 107 ++++++++++-
inst/doc/all-bib.bib | 8
inst/doc/snowfall.Snw | 67 +++++++
inst/doc/snowfall.pdf |binary
inst/doc/snowfall.tex |only
man/snowfall-a-package.Rd | 10 -
man/snowfall-b-init.Rd | 26 ++
man/snowfall-c-calculation.Rd | 5
man/snowfall-d-tools.Rd | 12 -
15 files changed, 605 insertions(+), 298 deletions(-)
Path: /cran/updated | permanent link
Title: Graphical Cluster Explorer
Diff between gcExplorer versions 0.9-2 dated 2010-01-07 and 0.9-3 dated 2010-03-04
More information about gcExplorer at CRAN
Description: Visualize cluster results and investigate additional
properties of clusters using interactive neighbourhood graphs.
By clicking on the node representing the cluster, information
about the cluster is provided using additional graphics or
summary statistics. For microarray data, tables with links to
genetic databases like NCBI Entrez Gene can be created for each
cluster.
Author: Theresa Scharl, Ingo Voglhuber, Friedrich Leisch
Maintainer: Theresa Scharl
DESCRIPTION | 6 +++---
NAMESPACE | 1 +
R/gridnodes.R |only
R/symbolplot.R |only
man/gcModify.Rd | 14 +++++++-------
man/gridnodes.Rd |only
man/symbolplot.Rd |only
7 files changed, 11 insertions(+), 10 deletions(-)
Path: /cran/updated | permanent link
Title: Models for Data from Unmarked Animals
Diff between unmarked versions 0.8-1 dated 2010-01-21 and 0.8-3 dated 2010-03-04
More information about unmarked at CRAN
Description: Unmarked estimates wildlife parameters for many popular
sampling methods including occurrence, point count, and
distance data using hierarchical models.
Author: Ian Fiske, Richard Chandler
Maintainer: Ian Fiske
DESCRIPTION | 13
NAMESPACE | 15
R/classes.R | 7
R/colext.R | 120 --
R/unmarkedEstimate.R | 10
R/unmarkedFit.R | 2007 ++++++++++++++++++++++--------------------
R/unmarkedFrame.R | 107 +-
R/unmarkedLinComb.R | 28
R/utils.R | 2
inst/doc/Overview.pdf |binary
man/colext.Rd | 57 -
man/csvToUMF.Rd | 10
man/extract-methods.Rd | 4
man/formatWideLong.Rd | 22
man/mallard.Rd | 2
man/nonparboot-methods.Rd |only
man/pcount.Rd | 4
man/unmarked-package.Rd | 8
man/unmarkedEstimate-class.Rd | 1
man/unmarkedFit-class.Rd | 15
man/unmarkedFrame-class.Rd | 6
man/unmarkedMultFrame.Rd | 26
22 files changed, 1386 insertions(+), 1078 deletions(-)
Path: /cran/updated | permanent link
Title: Standard Backtests for Technical Trading Rules in Financial Data
Diff between ttrTests versions 1.4 dated 2010-01-20 and 1.5 dated 2010-03-04
More information about ttrTests at CRAN
Description: Four core functions evaluate the efficacy of a technical
trading rule. - Conditional return statistics - Bootstrap
resampling statistics - Reality Check for data snooping bias
among parameter choices - Robustness, or Persistence, of
parameter choices
Author: David St John
Maintainer: David St John
DESCRIPTION | 8 ++--
R/cReturns.R | 1
R/dataSnoop.R | 81 ++++++++++++++++++++++++++++++-------------
R/nullModel.R | 89 +++++++++++++++++++++++++++++-------------------
R/paramPersist.R | 57 +++++++++++++++++-------------
R/paramStats.R | 47 +++++++++++++++++++------
R/position.R | 2 -
R/returnStats.R | 10 ++---
man/bootstrap.Rd | 5 ++
man/cReturns.Rd | 15 ++++----
man/dataSnoop.Rd | 36 +++++++++++++++----
man/defaults.Rd | 2 -
man/deleteNA.Rd | 2 -
man/generateSample.Rd | 2 -
man/indicator.Rd | 2 -
man/macd4.Rd | 2 -
man/nullModel.Rd | 24 ++++++++----
man/paramPersist.Rd | 25 +++++++------
man/paramStats.Rd | 7 ++-
man/position.Rd | 2 -
man/returnStats.Rd | 2 -
man/subperiods.Rd | 7 ++-
man/ttrTests-package.Rd | 14 ++++++-
23 files changed, 290 insertions(+), 152 deletions(-)
Path: /cran/updated | permanent link
Title: Processing and Simulating Genotype Data for Trio Logic
Regression
Diff between trio versions 1.0.12 dated 2010-03-02 and 1.0.13 dated 2010-03-04
More information about trio at CRAN
Description: Set up matched case-pseudo controls genotypes data for
trios in order to run trio logic regreesion, to impute missing
genotypes in trios, or to simulate case-parent trios with
disease risk dependent on SNP-SNP interaction. This package
furthermore contains functions for computing the values of
pairwise LD measures and for identifying LD blocks.
Author: Qing Li, Holger Schwender
Maintainer: Qing Li
DESCRIPTION | 8
R/tdt.R | 23 -
inst/doc/trio.pdf | 1123 +++++++++++++++++++++++++++---------------------------
man/tdt.Rd | 7
4 files changed, 600 insertions(+), 561 deletions(-)
Path: /cran/updated | permanent link
Title: Truncated Multivariate Normal and Student t Distribution
Diff between tmvtnorm versions 0.9-2 dated 2010-01-04 and 1.0-1 dated 2010-03-04
More information about tmvtnorm at CRAN
Description: Random number generation for the truncated multivariate
normal and Student t distribution. Computes probabilities,
quantiles and densities, including one-dimensional and
bivariate marginal densities. Computes first and second moments
(i.e. mean and covariance matrix) for the double-truncated
multinormal case.
Author: Stefan Wilhelm
Maintainer: Stefan Wilhelm
DESCRIPTION | 19 ++++++++++---------
NAMESPACE | 4 ++++
R/dtmvnorm.R | 1 +
R/dtmvt.R |only
R/ptmvt-marginal.R |only
R/ptmvt.R |only
R/rtmvnorm.R | 3 +++
R/rtmvt.R |only
man/dtmvt.Rd |only
man/ptmvnorm.marginal.Rd | 43 ++++++++++++++++++++++++++++++++-----------
man/ptmvt.Rd |only
man/qtmvnorm-marginal.Rd | 4 ++--
man/rtmvnorm.Rd | 17 ++++++++++-------
man/rtmvt.Rd |only
man/tmvnorm.Rd | 6 +++---
release-notes.txt | 14 ++++++++++++++
16 files changed, 79 insertions(+), 32 deletions(-)
Path: /cran/updated | permanent link
Title: Seasonal analysis of health data
Diff between season versions 0.2-3 dated 2009-12-16 and 0.2-4 dated 2010-03-04
More information about season at CRAN
Description: Routines for the seasonal analysis of health data,
including regression models, time-stratified case-crossover,
plotting functions and residual checks.
Author: Adrian Barnett
Maintainer: Adrian Barnett
season-0.2-3/season/CITATION |only
season-0.2-3/season/R/dumpdata.R |only
season-0.2-3/season/R/monthplot.R |only
season-0.2-3/season/R/test.R |only
season-0.2-3/season/man/monthplot.Rd |only
season-0.2-4/season/DESCRIPTION | 12 -
season-0.2-4/season/NAMESPACE | 2
season-0.2-4/season/R/cosinor.R | 84 ++++----
season-0.2-4/season/R/invyrfraction.R | 8
season-0.2-4/season/R/monthglm.R | 24 +-
season-0.2-4/season/R/plotCircular.R | 295 +++++++++++++++++++-----------
season-0.2-4/season/R/plotMonth.R |only
season-0.2-4/season/R/yrfraction.R | 2
season-0.2-4/season/inst |only
season-0.2-4/season/man/AFL.Rd | 2
season-0.2-4/season/man/casecross.Rd | 3
season-0.2-4/season/man/monthglm.Rd | 18 +
season-0.2-4/season/man/plotCircular.Rd | 71 +++++--
season-0.2-4/season/man/plotMonth.Rd |only
season-0.2-4/season/man/season-package.Rd | 53 +++--
season-0.2-4/season/man/seasrescheck.Rd | 2
21 files changed, 369 insertions(+), 207 deletions(-)
Path: /cran/updated | permanent link
Title: Generate LaTeX tables of descriptive statistics
Diff between reporttools versions 1.0.4 dated 2009-08-04 and 1.0.5 dated 2010-03-04
More information about reporttools at CRAN
Description: The functions in this package are especially helpful when
writing reports of data analysis using Sweave.
Author: Kaspar Rufibach
Maintainer: Kaspar Rufibach
reporttools-1.0.4/reporttools/R/NAtoCategory.R |only
reporttools-1.0.4/reporttools/R/checkDateSuccession.R |only
reporttools-1.0.4/reporttools/R/disp.R |only
reporttools-1.0.4/reporttools/R/displayCI.R |only
reporttools-1.0.4/reporttools/R/displayKbyC.R |only
reporttools-1.0.4/reporttools/R/eliminateNA.R |only
reporttools-1.0.4/reporttools/R/tableContinuous.R |only
reporttools-1.0.4/reporttools/R/tableDate.R |only
reporttools-1.0.4/reporttools/R/transformVarNames.R |only
reporttools-1.0.4/reporttools/R/varNamesToChar.R |only
reporttools-1.0.5/reporttools/CHANGES | 9
reporttools-1.0.5/reporttools/DESCRIPTION | 8
reporttools-1.0.5/reporttools/NAMESPACE |only
reporttools-1.0.5/reporttools/R/NAtoCategory.r |only
reporttools-1.0.5/reporttools/R/checkDateSuccession.r |only
reporttools-1.0.5/reporttools/R/colToMat.r |only
reporttools-1.0.5/reporttools/R/correctVarNames.r |only
reporttools-1.0.5/reporttools/R/disp.r |only
reporttools-1.0.5/reporttools/R/displayCI.r |only
reporttools-1.0.5/reporttools/R/displayKbyC.r |only
reporttools-1.0.5/reporttools/R/eliminateNA.r |only
reporttools-1.0.5/reporttools/R/formatPval.R |only
reporttools-1.0.5/reporttools/R/getFonts.r |only
reporttools-1.0.5/reporttools/R/math.r |only
reporttools-1.0.5/reporttools/R/tableContinuous.r |only
reporttools-1.0.5/reporttools/R/tableDate.r |only
reporttools-1.0.5/reporttools/R/tableNominal.R | 290 -
reporttools-1.0.5/reporttools/R/transformVarNames.r |only
reporttools-1.0.5/reporttools/R/varNamesToChar.r |only
reporttools-1.0.5/reporttools/R/vectorToString.r |only
reporttools-1.0.5/reporttools/inst/doc/jss.bst |only
reporttools-1.0.5/reporttools/inst/doc/jss.cls |only
reporttools-1.0.5/reporttools/inst/doc/jss.dbj |only
reporttools-1.0.5/reporttools/inst/doc/jss.drv |only
reporttools-1.0.5/reporttools/inst/doc/jss.dtx |only
reporttools-1.0.5/reporttools/inst/doc/jsslogo.jpg |only
reporttools-1.0.5/reporttools/inst/doc/reporttools.Rnw | 7
reporttools-1.0.5/reporttools/inst/doc/reporttools.dvi |only
reporttools-1.0.5/reporttools/inst/doc/reporttools.pdf | 2441 +++++++--------
reporttools-1.0.5/reporttools/man/colToMat.Rd |only
reporttools-1.0.5/reporttools/man/correctVarNames.Rd |only
reporttools-1.0.5/reporttools/man/formatPval.Rd |only
reporttools-1.0.5/reporttools/man/getFonts.Rd |only
reporttools-1.0.5/reporttools/man/math.Rd |only
reporttools-1.0.5/reporttools/man/reporttools-package.Rd | 9
reporttools-1.0.5/reporttools/man/tableContinuous.Rd | 19
reporttools-1.0.5/reporttools/man/tableDate.Rd | 12
reporttools-1.0.5/reporttools/man/tableNominal.Rd | 36
reporttools-1.0.5/reporttools/man/vectorToString.Rd |only
49 files changed, 1438 insertions(+), 1393 deletions(-)
Path: /cran/updated | permanent link
Title: A graphical user interface for data mining in R using Gnome
Diff between rattle versions 2.5.22 dated 2010-02-13 and 2.5.23 dated 2010-03-04
More information about rattle at CRAN
Description: Rattle (the R Analytic Tool To Learn Easily) provides a
Gnome (RGtk2) based interface to R functionality for data
mining. The aim is to provide a simple and intuitive interface
that allows a user to quickly load data from a CSV file (or via
ODBC), transform and explore the data, build and evaluate
models, and export models as PMML (predictive modelling markup
language) or as scores. All of this with knowing little about
R. All R commands are logged and commented through the log tab
and so available to the user as a script file or as an aide to
the user to interact directly with R itself. Rattle also
exports a number of utility functions and the graphical user
interface, invoked as rattle(), does not need to be run to
deploy these.
Author: Graham Williams
Maintainer: Graham Williams
rattle-2.5.22/rattle/inst/NEWS |only
rattle-2.5.22/rattle/po |only
rattle-2.5.22/rattle/test.po |only
rattle-2.5.23/rattle/DESCRIPTION | 8
rattle-2.5.23/rattle/R/associate.R | 19
rattle-2.5.23/rattle/R/data.R | 43 +
rattle-2.5.23/rattle/R/evaluate.R | 30 -
rattle-2.5.23/rattle/R/execute.R | 16
rattle-2.5.23/rattle/R/explore.R | 8
rattle-2.5.23/rattle/R/help.R | 152 +++--
rattle-2.5.23/rattle/R/kmeans.R | 22
rattle-2.5.23/rattle/R/nnet.R | 18
rattle-2.5.23/rattle/R/projects.R | 8
rattle-2.5.23/rattle/R/random_forest.R | 6
rattle-2.5.23/rattle/R/rattle.R | 464 ++++++++++------
rattle-2.5.23/rattle/R/rpart.R | 13
rattle-2.5.23/rattle/data/weather.RData |binary
rattle-2.5.23/rattle/data/weatherAUS.RData |binary
rattle-2.5.23/rattle/inst/CITATION | 10
rattle-2.5.23/rattle/inst/ChangeLog | 55 +
rattle-2.5.23/rattle/inst/arff/weather.arff | 2
rattle-2.5.23/rattle/inst/doc |only
rattle-2.5.23/rattle/inst/etc/rattle.glade | 40 -
rattle-2.5.23/rattle/inst/etc/textviews.xml | 2
rattle-2.5.23/rattle/inst/etc/tooltips.xml | 63 +-
rattle-2.5.23/rattle/inst/po/de |only
rattle-2.5.23/rattle/inst/po/es |only
rattle-2.5.23/rattle/inst/po/fr/LC_MESSAGES/R-rattle.mo |binary
rattle-2.5.23/rattle/inst/po/ja/LC_MESSAGES/R-rattle.mo |binary
rattle-2.5.23/rattle/man/internal.Rd | 5
30 files changed, 660 insertions(+), 324 deletions(-)
Path: /cran/updated | permanent link
Title: R tools for integrating phylogenies and ecology
Diff between picante versions 1.0-0 dated 2010-02-15 and 1.0-1 dated 2010-03-04
More information about picante at CRAN
Description: Phylocom integration, community analyses, null-models,
traits and evolution in R
Author: Steven W. Kembel
Maintainer: Steven W. Kembel
DESCRIPTION | 8 ++++----
R/phylosor.R | 1 +
man/picante-package.Rd | 4 ++--
3 files changed, 7 insertions(+), 6 deletions(-)
Path: /cran/updated | permanent link
More information about oro.nifti at CRAN
Path: /cran/new | permanent link
Title: Multivariate Statistical Analysis in Chemometrics
Diff between chemometrics versions 0.6 dated 2010-01-22 and 0.7 dated 2010-03-04
More information about chemometrics at CRAN
Description: This package is the R companion to the book "Introduction
to Multivariate Statistical Analysis in Chemometrics" written
by K. Varmuza and P. Filzmoser (2009)
Author: P. Filzmoser and K. Varmuza
Maintainer: P. Filzmoser
DESCRIPTION | 8 +--
R/prm.R | 92 ++++++++++++++++++++++++++++++++++++-------
R/prm_cv.R | 127 +++++++++++++++++++++++++++++++++++++++++++++++++++---------
R/prm_dcv.R | 4 -
4 files changed, 193 insertions(+), 38 deletions(-)
Path: /cran/updated | permanent link
Title: Demonstrations for teaching and learning
Diff between TeachingDemos versions 2.5 dated 2009-12-26 and 2.6 dated 2010-03-04
More information about TeachingDemos at CRAN
Description: This package is a set of demonstration functions that can
be used in a classroom to demonstrate statistical concepts, or
on your own to better understand the concepts or the
programming.
Author: Greg Snow
Maintainer: Greg Snow
DESCRIPTION | 10 +++++-----
NAMESPACE | 3 ++-
NEWS | 8 ++++++++
R/tkexamp.R | 2 +-
data/outliers.rda |only
man/TeachingDemos-package.Rd | 1 +
man/normtest.Rd | 2 +-
man/outliers.Rd |only
man/shadowtext.Rd | 2 +-
9 files changed, 19 insertions(+), 9 deletions(-)
Path: /cran/updated | permanent link
More information about TreeRank at CRAN
Path: /cran/new | permanent link
Title: R interface to DescribeDisplay (GGobi plugin)
Diff between DescribeDisplay versions 0.2.1 dated 2009-07-01 and 0.2.2 dated 2010-03-04
More information about DescribeDisplay at CRAN
Description: Produce publication quality graphics from output of
GGobi's describe display plugin
Author: Hadley Wickham
Maintainer: Hadley Wickham
DescribeDisplay-0.2.1/DescribeDisplay/inst/doc |only
DescribeDisplay-0.2.2/DescribeDisplay/DESCRIPTION | 6 +++---
DescribeDisplay-0.2.2/DescribeDisplay/R/ggplot-parcoords.r | 12 +++++++-----
DescribeDisplay-0.2.2/DescribeDisplay/load.r | 2 +-
4 files changed, 11 insertions(+), 9 deletions(-)
Path: /cran/updated | permanent link