Title: Visualizing Categorical Data
Diff between vcd versions 1.2-8 dated 2010-02-08 and 1.2-9 dated 2010-08-30
Description: Visualization techniques, data sets, summary and inference
procedures aimed particularly at categorical data. Special
emphasis is given to highly extensible grid graphics. The
package was inspired by the book "Visualizing Categorical Data"
by Michael Friendly.
Author: David Meyer, Achim Zeileis, Kurt Hornik
Maintainer: David Meyer
DESCRIPTION | 8 ++++----
NEWS | 18 ++++++++++++++++++
R/Ord_plot.R | 4 ++--
R/agreementplot.R | 2 +-
R/structable.R | 2 +-
R/ternaryplot.R | 2 ++
inst/NEWS | 18 ++++++++++++++++++
inst/doc/residual-shadings.pdf |binary
inst/doc/strucplot.pdf |binary
man/goodfit.Rd | 4 +++-
man/mosaic.Rd | 8 +++++---
man/ternaryplot.Rd | 3 +++
12 files changed, 57 insertions(+), 12 deletions(-)
Title: Sets, Generalized Sets, Customizable Sets and Intervals
Diff between sets versions 1.0-6 dated 2010-04-11 and 1.0-7 dated 2010-08-30
Description: Data structures and basic operations for ordinary sets,
generalizations such as fuzzy sets, multisets, and fuzzy
multisets, customizable sets, and intervals.
Author: David Meyer and Kurt Hornik (with contributions by Christian
Buchta)
Maintainer: David Meyer
DESCRIPTION | 8 ++++----
NEWS | 6 +++++-
R/interval.R | 4 ++--
inst/NEWS | 6 +++++-
inst/doc/sets.pdf |binary
5 files changed, 16 insertions(+), 8 deletions(-)
Title: Generate 3D visualizations for data exploration on the web
Diff between vrmlgen versions 1.4.4 dated 2010-06-15 and 1.4.6 dated 2010-08-30
Description: vrmlgen creates 3D scatter and bar plots, visualizations
of 3D meshes, parametric functions and height maps in
web-formats like the Virtual Reality Markup Language (VRML,
filetype .wrl) and the LiveGraphics3D format.
Author: Enrico Glaab
Maintainer:
DESCRIPTION | 10
R/vrmlgen-internal.R | 2
inst/CITATION |only
inst/doc/jssbib.bib | 522 +++++++++++++++++++++++++++----------------------
inst/doc/vrmlgen.pdf |binary
man/axis3d.Rd | 23 +-
man/bar3d.Rd | 39 ++-
man/cloud3d.Rd | 28 +-
man/lg3d.close.Rd | 17 +
man/lg3d.open.Rd | 19 +
man/lines3d.Rd | 23 +-
man/mesh3d.Rd | 27 +-
man/points3d.Rd | 23 +-
man/text3d.Rd | 27 +-
man/theo_edges.Rd | 4
man/theo_vertices.Rd | 4
man/uk_topo.Rd | 2
man/vrml.close.Rd | 21 +
man/vrml.open.Rd | 21 +
man/vrmlgen-package.Rd | 20 +
20 files changed, 490 insertions(+), 342 deletions(-)
Title: The skew-normal and skew-t distributions
Diff between sn versions 0.4-15 dated 2010-04-02 and 0.4-16 dated 2010-08-30
Description: Functions for manipulating skew-normal and skew-t
probability distributions, and for fitting them to data, in the
scalar and in the multivariate case.
Author: Adelchi Azzalini
Maintainer: Adelchi Azzalini
DESCRIPTION | 8 ++++----
R/sn.R | 6 +++---
2 files changed, 7 insertions(+), 7 deletions(-)
Title: Scalable Robust Estimators with High Breakdown Point
Diff between rrcov versions 1.0-01 dated 2010-06-21 and 1.1-00 dated 2010-08-30
Description: Robust Location and Scatter Estimation and Robust
Multivariate Analysis with High Breakdown Point.
Author: Valentin Todorov
Maintainer: Valentin Todorov
ChangeLog | 9
DESCRIPTION | 8
NAMESPACE | 10
R/AllClasses.R | 47 +
R/AllGenerics.R | 3
R/Cov.R | 72 +
R/CovControl.R | 92 +-
R/CovMMest.R |only
R/CovRobust.R | 1
R/CovSde.R | 25
R/CovSest.R | 453 +++++++-----
R/Pca.R | 5
R/PcaClassic.R | 7
R/PcaCov.R | 29
R/PcaGrid.R | 6
R/PcaHubert.R | 63 +
R/PcaLocantore.R | 10
R/PcaProj.R | 4
R/rrcov.control.R | 2
man/Cov-class.Rd | 19
man/CovControlMMest-class.Rd |only
man/CovControlMMest.Rd |only
man/CovControlSde.Rd | 2
man/CovControlSest.Rd | 2
man/CovMMest-class.Rd |only
man/CovMMest.Rd |only
man/CovSest.Rd | 13
man/Pca-class.Rd | 1
man/PcaCov.Rd | 15
man/PcaHubert.Rd | 15
man/getCenter-methods.Rd | 14
man/rrcov.control.Rd | 2
src/ds11.f | 69 +
src/sest.c |only
tests/thubert.R | 76 +-
tests/thubert.Rout.save |only
tests/tlda.Rout.save | 4
tests/tmcd4.Rout.save | 4
tests/tmest.Rout.save | 4
tests/tmest4.Rout.save | 4
tests/tmve4.Rout.save | 4
tests/togk4.Rout.save | 4
tests/tqda.Rout.save | 4
tests/tsde.R | 37
tests/tsde.Rout.save | 125 ++-
tests/tsest.R | 50 -
tests/tsest.Rout.save | 1621 ++++++++++++++++++++++++++++++++++++++++++-
47 files changed, 2497 insertions(+), 438 deletions(-)
Title: Biological Sequences Retrieval and Analysis
Diff between seqinr versions 2.0-9 dated 2010-03-20 and 3.0-0 dated 2010-08-30
Description: Exploratory data analysis and data visualization for
biological sequence (DNA and protein) data. Include also
utilities for sequence data management under the ACNUC system.
Author: Delphine Charif and Jean R. Lobry and Anamaria Necsulea and
Leonor Palmeira and Simon Penel
Maintainer: Simon Penel
DESCRIPTION | 10 +++++-----
R/as.alignment.R |only
inst/doc/src/appendix/releasenotes.rnw | 11 +++++++++++
man/as.alignment.Rd |only
man/clustal.Rd |only
man/fasta.Rd |only
man/mase.Rd |only
man/msf.Rd |only
man/phylip.Rd |only
9 files changed, 16 insertions(+), 5 deletions(-)
Title: Easy analysis and visualization of factorial experiments.
Diff between ez versions 1.6.1 dated 2010-03-21 and 2.0-0 dated 2010-08-30
Description: This package facilitates easy analysis of factorial
experiments, including purely within-Ss designs (a.k.a.
"repeated measures"), purely between-Ss designs, and mixed
within-and-between-Ss designs. The functions in this package
aim to provide simple, intuitive and consistent specification
of data analysis and visualization. Visualization functions
also include design visualization for pre-analysis data
auditing, and correlation matrix visualization. Finally, this
package includes functions for non-parametric analysis,
including permutation tests and bootstrap resampling. The
bootstrap function obtains predictions either by cell means or
by more advanced/powerful mixed effects models, yielding
predictions and confidence intervals that may be easily
visualized at any level of the experiment's design.
Author: Michael A. Lawrence
Maintainer: Michael A. Lawrence
CHANGES | 19 +++
DESCRIPTION | 30 +++--
NAMESPACE | 2
R/ez-internal.R | 309 +++++++++++++++++++++++++++++++----------------------
R/ezANOVA.R | 87 +-------------
R/ezBoot.R |only
R/ezCor.R | 5
R/ezDesign.R |only
R/ezPerm.R | 26 ++--
R/ezPlot.R | 117 ++++++++++++++++----
R/ezPlotBoot.R |only
R/ezPrecis.R |only
R/ezStats.R | 76 ++++++++++++-
data/ANT.rda |binary
data/ANT2.rda |only
man/ANT.Rd | 15 +-
man/ANT2.Rd |only
man/ez-internal.Rd | 3
man/ez-package.Rd | 16 ++
man/ezANOVA.Rd | 87 ++++++--------
man/ezBoot.Rd |only
man/ezCor.Rd | 81 ++++++++-----
man/ezDesign.Rd |only
man/ezPerm.Rd | 72 +++++-------
man/ezPlot.Rd | 258 ++++++++++++++++++++++++++------------------
man/ezPlotBoot.Rd |only
man/ezPrecis.Rd |only
man/ezStats.Rd | 71 ++++--------
28 files changed, 747 insertions(+), 527 deletions(-)
Title: Rcmdr plugin for quality control course
Diff between RcmdrPlugin.qual versions 0.5.0 dated 2010-04-27 and 1.0.0 dated 2010-08-30
More information about RcmdrPlugin.qual at CRAN
Description: This package provides an Rcmdr "plug-in" based on the
Quality control class Stat 4300
Author: Erin Hodgess
Maintainer: Erin Hodgess
DESCRIPTION | 8 ++++----
R/RcmdrPlugin.qual.R | 22 ++++++++++++++++++++++
inst/etc/menus.txt | 6 +++---
man/RcmdrPlugin.qual-internal.Rd | 1 +
4 files changed, 30 insertions(+), 7 deletions(-)
Permanent link
Title: Interface between GRASS 6 geographical information system and R
Diff between spgrass6 versions 0.6-19 dated 2010-07-24 and 0.6-20 dated 2010-08-30
Description: Interpreted interface between GRASS 6 geographical
information system and R, based on starting R from within the
GRASS environment, or running free-standing R in a temporary
GRASS location; the package provides facilities for using all
GRASS commands from the R command line.
Author: Roger Bivand
Maintainer: Roger Bivand
ChangeLog | 6 +++++-
DESCRIPTION | 8 ++++----
R/initGRASS.R | 10 +++++-----
inst/ChangeLog | 6 +++++-
4 files changed, 19 insertions(+), 11 deletions(-)
Title: Spatially explicit capture-recapture
Diff between secr versions 1.4.0 dated 2010-05-07 and 1.4.1 dated 2010-08-30
Description: Estimate animal population density with capture--recapture
data from an array of passive detectors (traps). Models
incorporating distance-dependent detection are fitted by
maximizing the likelihood. Tools are included for data
manipulation and model selection.
Author: Murray Efford
Maintainer: Murray Efford
secr-1.4.0/secr/man/print.mask.Rd |only
secr-1.4.1/secr/DESCRIPTION | 8
secr-1.4.1/secr/NAMESPACE | 5
secr-1.4.1/secr/NEWS | 124
secr-1.4.1/secr/R/D.designdata.R | 16
secr-1.4.1/secr/R/DENSITY.R | 4
secr-1.4.1/secr/R/autoini.R | 119
secr-1.4.1/secr/R/dbar.R | 26
secr-1.4.1/secr/R/empirical.R |only
secr-1.4.1/secr/R/functions.R | 8
secr-1.4.1/secr/R/ip.secr.R | 85
secr-1.4.1/secr/R/make.capthist.R | 6
secr-1.4.1/secr/R/make.tri.R |only
secr-1.4.1/secr/R/methods.R | 489
secr-1.4.1/secr/R/onAttach.R |only
secr-1.4.1/secr/R/pdot.R | 15
secr-1.4.1/secr/R/plot.secr.R | 122
secr-1.4.1/secr/R/secr.design.MS.R | 105
secr-1.4.1/secr/R/secr.make.newdata.R | 39
secr-1.4.1/secr/R/sim.capthist.R | 709
secr-1.4.1/secr/R/sim.popn.R |only
secr-1.4.1/secr/R/sim.secr.R | 152
secr-1.4.1/secr/R/write.captures.R | 10
secr-1.4.1/secr/data/housemouse.RData |binary
secr-1.4.1/secr/data/ovenbird.RData |binary
secr-1.4.1/secr/inst/doc/secr-manual.pdf |21510 ++++++++++++++--------------
secr-1.4.1/secr/man/FAQ.Rd | 34
secr-1.4.1/secr/man/autoini.Rd | 22
secr-1.4.1/secr/man/coulombe.Rd | 49
secr-1.4.1/secr/man/deermouse.Rd | 28
secr-1.4.1/secr/man/derivedMS.Rd | 39
secr-1.4.1/secr/man/detectfn.Rd | 13
secr-1.4.1/secr/man/empirical.Rd |only
secr-1.4.1/secr/man/homerange.Rd | 5
secr-1.4.1/secr/man/ip.secr.Rd | 22
secr-1.4.1/secr/man/make.traps.Rd | 7
secr-1.4.1/secr/man/make.tri.Rd |only
secr-1.4.1/secr/man/ovenbird.Rd | 49
secr-1.4.1/secr/man/ovensong.Rd | 17
secr-1.4.1/secr/man/plot.secr.Rd | 3
secr-1.4.1/secr/man/possum.Rd | 13
secr-1.4.1/secr/man/rbind.capthist.Rd | 18
secr-1.4.1/secr/man/rbind.traps.Rd | 11
secr-1.4.1/secr/man/secr-package.Rd | 16
secr-1.4.1/secr/man/secr.fit.Rd | 69
secr-1.4.1/secr/man/secr.model.density.Rd | 7
secr-1.4.1/secr/man/secr.model.detection.Rd | 28
secr-1.4.1/secr/man/secrdemo.Rd | 15
secr-1.4.1/secr/man/sim.capthist.Rd | 48
secr-1.4.1/secr/man/sim.popn.Rd | 15
secr-1.4.1/secr/man/sim.secr.Rd | 4
secr-1.4.1/secr/man/skink.Rd | 13
secr-1.4.1/secr/man/stoatDNA.Rd | 17
secr-1.4.1/secr/src/secr.c | 1186 -
secr-1.4.1/secr/src/secr.h | 7
55 files changed, 13337 insertions(+), 11970 deletions(-)
Title: Nearest Neighbor Autocovariates
Diff between nnc versions 1.12 dated 2010-08-23 and 1.13 dated 2010-08-30
Description: Computes nearest neighbor autocovariates
Author: A. I. McLeod and M. S. Islam
Maintainer:
DESCRIPTION | 14 +++----
NAMESPACE | 8 ++--
NEWS | 4 ++
inst/Mathematica |only
inst/doc/Rplots.pdf | 89 ++++++++++++++++++++++++-----------------------
inst/doc/nncVignette.Rnw | 16 ++++----
inst/doc/nncVignette.pdf |binary
man/khat.Rd | 10 ++---
man/nnc-package.Rd | 10 ++---
man/nnc.Rd | 20 +++++-----
man/nncTest.Rd | 8 ++--
11 files changed, 94 insertions(+), 85 deletions(-)
Title: Smoothed minimax concave penalization (SMCP) method for
genome-wide association studies.
Diff between SMCP versions 1.1.1 dated 2010-08-26 and 1.1.2 dated 2010-08-30
Description: A package containing functions that fit the marginalized
linear model with SMCP.
Author: Jin (Gordon) Liu
Maintainer: Jin (Gordon) Liu
DESCRIPTION | 17 ++++++++---------
1 file changed, 8 insertions(+), 9 deletions(-)
Title: Read and write of MAT files together with R-to-Matlab
connectivity
Diff between R.matlab versions 1.3.1 dated 2010-05-22 and 1.3.2 dated 2010-08-30
Description: This package provides methods to read and write MAT files.
It also makes it possible to communicate (evaluate code, send
and retrieve objects etc.) with Matlab v6 or higher running
locally or on a remote host.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson
DESCRIPTION | 10 ++++---
R/Matlab.R | 28 ++++++++++++++-------
incl/Matlab.Rex | 28 +++++++++++++++------
inst/NEWS | 14 ++++++++++
inst/externals/MatlabServer.m | 20 +++++++++++----
man/Matlab.Rd | 55 ++++++++++++++++++++++++++++--------------
6 files changed, 111 insertions(+), 44 deletions(-)