CRANberries

CRANberries aggregates information about new, updated and removed packages from the
CRAN network for R available as this html version and a corresponding RSS feed.
Created and provided by Dirk Eddelbuettel.

Sat, 31 Dec 2011

New package abd with initial version 0.1-22
Package: abd
Type: Package
Title: The Analysis of Biological Data
Version: 0.1-22
Date: 2011-9-12
Author: Kevin M. Middleton , Randall Pruim
Maintainer: Kevin M. Middleton
Depends: R (>= 2.10), nlme, lattice, grid
Suggests: boot, car, ggplot2, plyr, HH, vcd, Hmisc
Description: The abd package contains data sets and sample code for The Analysis of Biological Data by Michael Whitlock and Dolph Schluter (2009; Roberts & Company Publishers).
License: GPL-2
LazyLoad: yes
LazyData: yes
Encoding: UTF-8
Repository: CRAN
Date/Publication: 2011-09-14 15:29:03

More information about abd at CRAN
Path: /cran/new | permanent link

New package abind with initial version 1.4-0
Package: abind
Version: 1.4-0
Date: 2011-07-17
Title: Combine multi-dimensional arrays
Author: Tony Plate and Richard Heiberger
Maintainer: Tony Plate
Description: Combine multi-dimensional arrays into a single array. This is a generalization of cbind and rbind. Works with vectors, matrices, and higher-dimensional arrays. Also provides functions adrop, asub, and afill for manipulating, extracting and replacing data in arrays.
Depends: R (>= 1.5.0)
License: LGPL (>= 2)
Packaged: 2011-11-26 15:49:41 UTC; tap
Repository: CRAN
Date/Publication: 2011-11-27 09:14:09

More information about abind at CRAN
Path: /cran/new | permanent link

New package abcdeFBA with initial version 0.1
Package: abcdeFBA
Type: Package
Title: ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package.
Version: 0.1
Date: 2010-09-16
Author: Abhilash Gangadharan, Neha Rohatgi
Maintainer: Abhilash Gangadharan
Depends: Rglpk,rgl,corrplot,lattice,R (>= 2.10)
Suggests: LIM
Description: Functions for Constraint Based Simulation using Flux Balance Analysis and informative analysis of the data generated during simulation.
License: GPL-2
Lazyload: yes
Packaged: 2011-11-05 07:23:27 UTC; Abhilash
Repository: CRAN
Date/Publication: 2011-11-05 10:48:08

More information about abcdeFBA at CRAN
Path: /cran/new | permanent link

New package abc with initial version 1.4
Package: abc
Version: 1.4
Date: 2011-09-02
Title: Tools for Approximate Bayesian Computation (ABC)
Author: Katalin Csillery, Michael Blum and Olivier Francois
Maintainer: Katalin Csillery and Michael Blum
Depends: R (>= 2.10), MASS, nnet, quantreg, locfit
Description: The package implements several ABC algorithms for performing parameter estimation and model selection. Cross-validation tools are also available for measuring the accuracy of ABC estimates, and to calculate the misclassification probabilities of different models.
Repository: CRAN
License: GPL (>= 3)
Packaged: 2011-09-03 12:42:41 UTC; kcsillery
Date/Publication: 2011-09-04 05:18:45

More information about abc at CRAN
Path: /cran/new | permanent link

Package ror updated to version 0.6.1 with previous version 0.6 dated 2011-12-30

Title: Robust Ordinal Regression MCDA library
Description: An R package for computing both exact- and stochastic robust ordinal regression.
Author: Tommi Tervonen
Maintainer: Tommi Tervonen

Diff between ror versions 0.6 dated 2011-12-30 and 0.6.1 dated 2011-12-31 

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More information about ror at CRAN
Path: /cran/updated | permanent link

Package pbkrtest updated to version 0.2.0 with previous version 0.1.3 dated 2011-12-06

Title: Parametric bootstrap and Kenward Roger based methods for mixed model comparison
Description: Test in linear mixed effects models based on parametric bootstrap approaches and Kenward-Roger modification of F-tests
Author: Ulrich Halekoh Søren Højsgaard
Maintainer: Søren Højsgaard

Diff between pbkrtest versions 0.1.3 dated 2011-12-06 and 0.2.0 dated 2011-12-31 

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 7 files changed, 194 insertions(+), 111 deletions(-)

More information about pbkrtest at CRAN
Path: /cran/updated | permanent link

Package languageR updated to version 1.4 with previous version 1.3 dated 2011-12-21

Title: Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics".
Description: Data sets exemplifying statistical methods, and some facilitatory utility functions used in "Analyzing Linguistic Data: A practical introduction to statistics using R", Cambridge University Press, 2008.
Author: R. H. Baayen
Maintainer:

Diff between languageR versions 1.3 dated 2011-12-21 and 1.4 dated 2011-12-31 

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More information about languageR at CRAN
Path: /cran/updated | permanent link

Package gstudio updated to version 0.5 with previous version 0.3 dated 2011-11-25

Title: GeneticStudio packages for R.
Description: This package was created to support population genetics and landscape genetic courses I teach at Virginia Commonwealth University. This package contains classes and functions for the analysis of marker data to include structure statistics, analyses based upon allele frequencies, and the Population Graphs network analysis of spatial conditional genetic covariance.
Author: Rodney J. Dyer
Maintainer: Rodney J. Dyer

Diff between gstudio versions 0.3 dated 2011-11-25 and 0.5 dated 2011-12-31 

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 47 files changed, 192 insertions(+), 176 deletions(-)

More information about gstudio at CRAN
Path: /cran/updated | permanent link

Package coxme updated to version 2.2-1 with previous version 2.1-3 dated 2011-06-20

Title: Mixed Effects Cox Models.
Description: Cox proportional hazards models containing Gaussian random effects, also known as frailty models.
Author: Terry Therneau
Maintainer: Terry Therneau

Diff between coxme versions 2.1-3 dated 2011-06-20 and 2.2-1 dated 2011-12-31 

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More information about coxme at CRAN
Path: /cran/updated | permanent link

Package doBy updated to version 4.4.4 with previous version 4.4.3 dated 2011-11-11

Title: doBy - Groupwise summary statistics, general linear contrasts, LSMEANS (least-squares-means), and other utilities
Description: doBy contains a variety of utilities including: 1) Facilities for groupwise computations of summary statistics and other facilities for working with grouped data. 2) General linear contrasts and LSMEANS (least-squares-means also known as population means), 3) Rscript2HTML for autmatic generation of HTML file from R-script with a minimum of markup, 4) implementation of the Kenward-Roger method for estimating denominator degrees of freedom various for tests in linear mixed models, 5) methods for determining p-values based on parametric bootstrap in linear mixed models 6) other utilities. doBy originally contained facilities for 'doing something to data where data would be partitioned by some variables which define groupings of data' - hence the name doBy.
Author: Sren Hjsgaard and Ulrich Halekoh with contributions from Jim Robison-Cox, Kevin Wright and Alessandro A. Leidi.
Maintainer: Sren Hjsgaard

Diff between doBy versions 4.4.3 dated 2011-11-11 and 4.4.4 dated 2011-12-31 

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More information about doBy at CRAN
Path: /cran/updated | permanent link

Package CellularAutomaton updated to version 1.1 with previous version 1.0 dated 2007-11-26

Title: One-Dimensional Cellular Automata
Description: This package is an object-oriented implementation of one-dimensional cellular automata. It supports many of the features offered by Mathematica, including elementary rules, user-defined rules, radii, user-defined seeding, and plotting.
Author: John Hughes
Maintainer: John Hughes

Diff between CellularAutomaton versions 1.0 dated 2007-11-26 and 1.1 dated 2011-12-31 

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 man/plot.Rd                                |    2 +-
 18 files changed, 34 insertions(+), 32 deletions(-)

More information about CellularAutomaton at CRAN
Path: /cran/updated | permanent link

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