Title: Statistical Methods for the Item Count Technique and List
Experiment
Diff between list versions 4.2 dated 2011-11-02 and 5.0 dated 2012-01-03
Description: list is a publicly available R package that allows researchers to conduct multivariate statistical analyses of survey data with list experiments. In addition, the package implements the statistical test that is designed to detect certain failures of list experiments. This survey methodology is also known as the item count technique or the unmatched count technique and is an alternative to the commonly used randomized response method. The package implements the methods developed by Imai (2011) and Blair and Imai (2012), a Bayesian MCMC implementation of regression for the standard and multiple sensitive item list experiment designs including ceiling and floor effects and a random effects setup, and a Bayesian MCMC hierarchical regression model with up to three hierarchical groups.
Author: Graeme Blair
Maintainer: Graeme Blair
ChangeLog | 3
DESCRIPTION | 21
MD5 | 43
NAMESPACE | 19
R/ictreg.R | 166 +-
R/ictregBayes.R | 1111 ++++++++++++----
R/ictregBayesHier.R |only
data/affirm.tab.gz |binary
data/mis.tab.gz |binary
data/multi.tab.gz |binary
data/race.tab.gz |binary
man/ict.test.Rd | 6
man/ictreg.Rd | 18
man/ictregBayes.Rd | 213 ++-
man/ictregBayesHier.Rd |only
man/plot.predict.ictreg.Rd | 10
man/predict.ictreg.Rd | 13
man/predict.ictregBayes.Rd | 10
man/predict.ictregBayesHier.Rd |only
man/summary.ictreg.Rd | 13
src/models.c | 2680 +++++++++++++++++++++++++++++++++++++----
src/models.h | 6
src/vector.c | 19
src/vector.h | 3
24 files changed, 3677 insertions(+), 677 deletions(-)
Title: Diagnostic tools for two-level normal hierarchical linear models
Diff between HLMdiag versions 0.1.2 dated 2011-12-19 and 0.1.3 dated 2012-01-03
Description: A suite of diagnostic tools for two-level
normal hierarchical linear models. The package offers
not only traditional case-deletion diagnostics (Cook's
distance, covratio, covtrace, and MDFFITS) but also
provides graphics for residual analysis. Currently,
case deletion is performed by iteratively refitting the
model using lmer in the lme4 package, so for data sets
with many groups, computation is currently slow.
Author: Adam Loy
Maintainer: Adam Loy
DESCRIPTION | 9 +++++----
MD5 | 8 ++++----
NEWS | 3 +++
R/HLMresid.R | 7 +++++--
man/HLMresid.Rd | 7 ++++---
5 files changed, 21 insertions(+), 13 deletions(-)
Title: Generate images using Fourier descriptors.
Diff between FourierDescriptors versions 0.1-1 dated 2010-09-05 and 0.1-2 dated 2012-01-03
More information about FourierDescriptors at CRAN
Description: The FourierDescriptors package provides methods for creating, manipulating and visualizing Fourier descriptors, a representational scheme used to describe closer planar contours. The images most easily described using Fourier descriptors are useful as stimuli for experiments in psychology and neuroscience.
Author: John Myles White
Maintainer: John Myles White
.gitignore | 2 ++
DESCRIPTION | 16 ++++++----------
MD5 |only
email_format.txt |only
upload.sh | 2 +-
5 files changed, 9 insertions(+), 11 deletions(-)
Permanent link
Title: Tools for analyzing eQTL experiments: A complementary to Karl
Broman's 'qtl' package for genome-wide analysis
Diff between eqtl versions 1.1-5 dated 2011-02-15 and 1.1-6 dated 2012-01-03
Description: Analysis of experimental crosses to identify genes (called
quantitative trait loci, QTLs) contributing to variation in
quantitative traits.
Author: Ahmid A. Khalili and Olivier Loudet
Maintainer: Ahmid A. Khalili
DESCRIPTION | 10 +++++-----
MD5 |only
NAMESPACE |only
R/cim.peak.R | 2 +-
R/define.peak.R | 2 +-
data/ATH.coord.rda |binary
data/BSpgmap.rda |binary
data/datalist |only
data/seed10.rda |binary
9 files changed, 7 insertions(+), 7 deletions(-)
Title: CORElearn - classification, regression, feature evaluation and
ordinal evaluation
Diff between CORElearn versions 0.9.35 dated 2011-08-19 and 0.9.36 dated 2012-01-03
Description: CORElearn is machine learning suite ported to R from standalone C++ package.
It contains several model learning techniques in classification and regression,
for example classification and regression trees with optional constructive induction and models in the leafs,
random forests, kNN, naive Bayes, and locally weighted regression.
It is especially strong in feature evaluation algorithms where it contains several variants of Relief
algorithm and many impurity based attribute evaluation functions, e.g., Gini, information gain, MDL, DKM, ...
Its additional strength is ordEval algorithm and its visualization used for ordinal features and class.
Several algorithms support parallel multithreaded execution via OpenMP. Windows binary versions
supporting multithreading are available on package website, as CRAN uses different toolchain.
The top level documentation is reachable through ?CORElearn.
Author: Marko Robnik-Sikonja
Maintainer: Marko Robnik-Sikonja
ChangeLog | 2
DESCRIPTION | 37 ++++-----
MD5 | 72 +++++++++----------
R/Rinterface.R | 20 ++++-
R/rfVisualize.R | 1
R/testCore.R | 4 -
R/util.R | 10 +-
man/CORElearn-internal.Rd | 15 +---
man/CORElearn-package.Rd | 5 +
man/attrEval.Rd | 4 -
man/calibrate.Rd | 7 +
man/classDataGen.Rd | 3
man/classPrototypes.Rd | 3
man/getRpartModel.Rd | 3
man/helpCore.Rd | 36 +++++++--
man/modelEval.Rd | 57 +++++++++++----
man/ordEval.Rd | 3
man/plot.ordEval.Rd | 3
man/predict.CoreModel.Rd | 3
src/Makevars | 4 -
src/Rfront.cpp | 5 -
src/Rfront.h | 3
src/dataStore.cpp | 11 ++
src/dataStore.h | 2
src/estCommon.cpp | 4 -
src/expr.cpp | 60 ++++++++++++----
src/expr.h | 2
src/frontend.cpp | 171 ++++++++++++++++++----------------------------
src/ftree.h | 2
src/menu.cpp | 4 -
src/nrutil.cpp | 1
src/options.cpp | 63 +++++++++++-----
src/options.h | 5 +
src/trutil.cpp | 7 +
src/trutilReg.cpp | 19 ++---
src/utils.cpp | 50 ++++++++++++-
src/utils.h | 3
37 files changed, 424 insertions(+), 280 deletions(-)
Title: Implementation of a generic adaptive Monte Carlo Markov Chain
sampler
Diff between adaptMCMC versions 1.0 dated 2011-12-09 and 1.0.2 dated 2012-01-03
Description: This package provides an implementation of the generic adaptive Monte
Carlo Markov chain sampler proposed by Vihola (2011).
Author: Andreas Scheidegger,
Maintainer: Andreas Scheidegger
DESCRIPTION | 11 +--
MD5 | 14 ++--
NAMESPACE | 4 -
R/Adaptive_MCMC.R | 134 +++++++++++++++++++++++++++++++--------------
man/MCMC.Rd | 18 +-----
man/MCMC.add.samples.Rd | 5 -
man/MCMC.parallel.Rd | 27 ++++-----
man/genericMCMC-package.Rd | 6 +-
8 files changed, 128 insertions(+), 91 deletions(-)
Title: A package for variogram diagnostics
Diff between vardiag versions 0.1-3 dated 2010-04-03 and 0.1-5 dated 2012-01-03
Description: This package allows interactive variogram diagnostics.
Author: Ernst Glatzer
Maintainer: Edzer Pebesma
DESCRIPTION | 10 +++---
MD5 |only
NAMESPACE |only
R/VARDIAG.R | 2 +
man/CookRLF.varobj.Rd | 75 +++++++++++++++++++++--------------------------
man/PlotDiag.varobj.Rd | 3 +
man/QQDecorr.varobj.Rd | 3 +
man/QQVarcloud.varobj.Rd | 3 +
man/interact.varobj.Rd | 3 +
man/tulln.Rd | 6 +--
man/varobj.Rd | 3 +
11 files changed, 58 insertions(+), 50 deletions(-)
Title: Datasets and functions from the Faculty of Life Sciences,
University of Copenhagen
Diff between kulife versions 0.1-6 dated 2011-06-26 and 0.1-9 dated 2012-01-03
Description: Provides various functions and data sets from experiments at the Faculty of Life Sciences, University of Copenhagen
Author: Claus Ekstrom
Maintainer: Claus Ekstrom
DESCRIPTION | 15 +++++++--------
MD5 |only
R/auc.r | 2 +-
R/kulife.colors.R |only
R/rootonorm.r | 6 ++++--
data/datalist |only
man/auc.Rd | 2 +-
man/kulife.colors.Rd |only
man/rootonorm.Rd | 7 ++++++-
9 files changed, 19 insertions(+), 13 deletions(-)
Title: Map experimental data on custom-made SVG file
Diff between SVGMapping versions 1.4 dated 2011-11-08 and 1.41 dated 2012-01-03
Description: This package allows you to display experimental data on a custom-made SVG image.
Author: Jean-Christophe AUDE, Raphael CHAMPEIMONT
Maintainer: Jean-Christophe AUDE
DESCRIPTION | 8 +-
MD5 | 16 ++---
NAMESPACE | 2
NEWS |only
R/KEGGTemplate.R |only
R/SVGMapping.R | 2
data/yeastAnnotMatrix.rda |binary
data/yeastExprData.rda |binary
inst/doc/SVGMapping-tutorial.pdf |binary
man/mapDataSVG.Rd | 118 ++++++++++++++++++++++++++-------------
10 files changed, 98 insertions(+), 48 deletions(-)
Title: Statistical Analysis for Environmental Data
Diff between StatDA versions 1.5 dated 2011-02-08 and 1.6.2 dated 2012-01-03
Description: This package offers different possibilities to make statistical analysis for Environmental Data.
Author: Peter Filzmoser and Barbara Steiger
Maintainer: Peter Filzmoser
StatDA-1.5/StatDA/inst/doc/Makefile |only
StatDA-1.6.2/StatDA/DESCRIPTION | 16 ++++++++--------
StatDA-1.6.2/StatDA/MD5 |only
StatDA-1.6.2/StatDA/NAMESPACE |only
StatDA-1.6.2/StatDA/R/KrigeLegend.R | 4 ++--
StatDA-1.6.2/StatDA/R/boxplotlog.R | 12 ++++++------
StatDA-1.6.2/StatDA/R/boxplotperc.R | 4 ++--
StatDA-1.6.2/StatDA/R/plotmvoutlier.R | 4 ++--
StatDA-1.6.2/StatDA/R/scatter3dPETER.R | 2 +-
StatDA-1.6.2/StatDA/R/varioCalc.R | 4 ++--
StatDA-1.6.2/StatDA/data/AuNEW.rda |binary
StatDA-1.6.2/StatDA/data/AuOLD.rda |binary
StatDA-1.6.2/StatDA/data/CHorANADUP.rda |binary
StatDA-1.6.2/StatDA/data/CHorFieldDUP.rda |binary
StatDA-1.6.2/StatDA/data/CHorSTANDARD.rda |binary
StatDA-1.6.2/StatDA/data/bhorizon.rda |binary
StatDA-1.6.2/StatDA/data/bordersKola.rda |binary
StatDA-1.6.2/StatDA/data/chorizon.rda |binary
StatDA-1.6.2/StatDA/data/kola.background.rda |binary
StatDA-1.6.2/StatDA/data/monch.rda |binary
StatDA-1.6.2/StatDA/data/moss.rda |binary
StatDA-1.6.2/StatDA/data/nizap.rda |binary
StatDA-1.6.2/StatDA/data/ohorizon.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.As_C.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.As_C_m.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.AuNEW.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.Ca_C.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.Ca_O.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.Hg_O.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.Pb_O1.rda |binary
StatDA-1.6.2/StatDA/data/res.eyefit.Pb_O2.rda |binary
StatDA-1.6.2/StatDA/data/timetrend.rda |binary
StatDA-1.6.2/StatDA/data/topsoil.rda |binary
StatDA-1.6.2/StatDA/inst/doc/StatDA.Rnw | 5 ++---
StatDA-1.6.2/StatDA/inst/doc/StatDA.pdf |binary
StatDA-1.6.2/StatDA/man/bhorizon.Rd | 2 +-
StatDA-1.6.2/StatDA/man/moss.Rd | 2 +-
StatDA-1.6.2/StatDA/vignettes |only
38 files changed, 27 insertions(+), 28 deletions(-)
Title: R Client for Mobilize/Andwellness server
Diff between Ohmage versions 2.9 dated 2011-12-27 and 2.9-1 dated 2012-01-03
Description: R Client for Mobilize and Andwellness server. Implements basic R
functions to call and process data.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms
Ohmage-2.9-1/Ohmage/DESCRIPTION | 7 +--
Ohmage-2.9-1/Ohmage/MD5 | 15 +++---
Ohmage-2.9-1/Ohmage/NAMESPACE | 1
Ohmage-2.9-1/Ohmage/R/loadtest.R | 43 +++++++++++++------
Ohmage-2.9-1/Ohmage/R/oh.call.R | 13 -----
Ohmage-2.9-1/Ohmage/R/oh.survey_response.update.R |only
Ohmage-2.9-1/Ohmage/inst/files/jeroen.xml |only
Ohmage-2.9-1/Ohmage/man/loadtest.Rd | 11 +++-
Ohmage-2.9-1/Ohmage/man/loadtest.wipe.Rd | 8 ++-
Ohmage-2.9-1/Ohmage/man/oh.survey_response.update.Rd |only
Ohmage-2.9/Ohmage/.project |only
11 files changed, 58 insertions(+), 40 deletions(-)
Title: Matrix Computation Based Identification Of Prime Implicants
Diff between mcbiopi versions 1.1.0 dated 2011-12-30 and 1.1.1 dated 2012-01-03
Description: Computes the prime implicants or a minimal disjunctive normal form for a
logic expression presented by a truth table or a logic tree. Has been particularly
developed for logic expressions resulting from a logic regression analysis, i.e.
logic expressions typically consisting of up to 16 literals, where the prime implicants
are typically composed of a maximum of 4 or 5 literals.
Author: Holger Schwender
Maintainer: Holger Schwender
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
R/getPImps.R | 2 +-
3 files changed, 7 insertions(+), 7 deletions(-)
Title: Provides datasets for Introduction to Statistical Data Analysis
for the Life Sciences
Diff between isdals versions 1.0-4 dated 2011-07-23 and 1.0-5 dated 2012-01-03
Description: Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences
Author: Claus Ekstrom
Maintainer: Claus Ekstrom
DESCRIPTION | 13 ++++++-------
MD5 |only
2 files changed, 6 insertions(+), 7 deletions(-)
Title: procedures for automated interpolation - methods only to be used
interactively, not included in intamap package
Diff between intamapInteractive versions 1.1-0 dated 2011-12-02 and 1.1-1 dated 2012-01-03
More information about intamapInteractive at CRAN
Description: A package that provides additional functionality for interpolation
spatial interpolation.
Author: Edzer Pebesma
Maintainer: Edzer J. Pebesma
intamapInteractive-1.1-0/intamapInteractive/man/ssaOptim.Rd |only
intamapInteractive-1.1-1/intamapInteractive/DESCRIPTION | 10
intamapInteractive-1.1-1/intamapInteractive/MD5 | 14
intamapInteractive-1.1-1/intamapInteractive/R/optimizeNetwork.R | 4
intamapInteractive-1.1-1/intamapInteractive/R/ssaOptim.R | 4
intamapInteractive-1.1-1/intamapInteractive/man/calculateMukv.Rd | 34 +-
intamapInteractive-1.1-1/intamapInteractive/man/intamapInteractive-package.rd | 6
intamapInteractive-1.1-1/intamapInteractive/man/optimizeNetwork.Rd | 165 ++++++----
intamapInteractive-1.1-1/intamapInteractive/man/ssaOptim.rd |only
9 files changed, 149 insertions(+), 88 deletions(-)
Permanent link
Title: Bayesian Ordinal Analysis for State Trace Designs
Diff between StateTrace versions 1.0-1 dated 2011-11-30 and 1.0-2 dated 2012-01-03
Description: StateTrace automates many aspects of a state-trace analysis of accuracy and other binary response data, including implementing Bayesian methods quantifying evidence about the outcomes of a state-trace experiment and the creation of customisable graphs. It also offers users either a GUI or non-GUI (i.e., command line input) implementation of the contained functions
Author: Melissa Prince, Guy Hawkins, Jonathon Love, Andrew Heathcote
Maintainer: David Elliott
DESCRIPTION | 8 ++++----
MD5 | 24 ++++++++++++------------
inst/CITATION | 2 +-
inst/doc/StateTrace.pdf |binary
man/001_StateTrace-package.rd | 6 +++---
man/002_DFIE.rd | 6 +++---
man/004_staMake.rd | 2 +-
man/005_stFirst.rd | 4 ++--
man/006_stSample.rd | 4 ++--
man/008_stProbplot.rd | 3 +++
man/009_stBootav.rd | 2 +-
man/010_stPlot.rd | 5 ++++-
man/011_staManage.rd | 2 +-
13 files changed, 37 insertions(+), 31 deletions(-)
Title: State space models
Diff between SSsimple versions 0.5 dated 2011-05-20 and 0.5.1 dated 2012-01-03
Description: Simulate, solve state space models
Author: Dave Zes
Maintainer: Dave Zes
DESCRIPTION | 9 +++++----
MD5 |only
R/SS.ID.R | 2 +-
R/SS.sim.R | 6 +++---
R/SS.sim.tv.R | 6 +++---
R/SS.solve.R | 10 ++++++----
R/SS.solve.tv.R | 14 ++++++++------
inst/doc/SSsimple.Snw | 2 --
inst/doc/SSsimple.pdf |binary
man/H.omega.cos.2D.Rd | 16 ++++++++--------
man/H.omega.sincos.Rd | 17 +++++++++--------
man/SS.ID.Rd | 12 ++++++------
man/SS.sim.Rd | 13 +++++++------
man/SS.sim.tv.Rd | 19 +++++++++++--------
man/SS.solve.Rd | 13 +++++++------
man/SS.solve.tv.Rd | 17 +++++++++--------
man/SS.stst.Rd | 21 +++++++++++----------
man/SS.stst.tv.Rd | 22 ++++++++++++----------
man/SSsimple-package.Rd | 12 ++++++------
19 files changed, 112 insertions(+), 99 deletions(-)
Title: R interface to the PostgreSQL database system
Diff between RPostgreSQL versions 0.3-0 dated 2011-12-30 and 0.3-1 dated 2012-01-03
Description: Database interface and PostgreSQL driver for R
This package provides a Database Interface (DBI) compliant
driver for R to access PostgreSQL database systems.
In order to build and install this package from source, PostgreSQL
itself must be present your system to provide PostgreSQL functionality
via its libraries and header files. These files are provided as
postgresql-devel package under some Linux distributions.
On Microsoft Windows system the attached libpq library source will be used.
A wiki and issue tracking system for the package are available
at Google Code at https://code.google.com/p/rpostgresql/ .
Author: Joe Conway, Dirk Eddelbuettel, Tomoaki Nishiyama, Sameer Kumar Prayaga (during 2008), Neil Tiffin
Maintainer: Tomoaki Nishiyama
ChangeLog | 11 +++++++++++
DESCRIPTION | 8 ++++----
MD5 | 12 ++++++------
configure | 22 ++++++++++++++++++++++
configure.in | 21 +++++++++++++++++++++
inst/doc/DBI.pdf |binary
src/Makevars.in | 18 +-----------------
7 files changed, 65 insertions(+), 27 deletions(-)
Title: Statistics for psychiatric research
Diff between rpsychi versions 0.7 dated 2011-11-12 and 0.8 dated 2012-01-03
Description: The rpsychi offers a number of functions for psychiatry, psychiatric nursing, clinical psychology. Functions are primarily for statistical significance testing using published work. For example, you can conduct a factorial analysis of variance (ANOVA), which requires only the mean, standard deviation, and sample size for each cell, rather than the individual data. This package covers fundamental statistical tests such as t-test, chi-square test, analysis of variance, and multiple regression analysis. With some exceptions, you can obtain effect size and its confidence interval. These functions help you to obtain effect size from published work, and then to conduct a priori power analysis or meta-analysis, even if a researcher do not report effect size in a published work.
Author: Yasuyuki Okumura
Maintainer: Yasuyuki Okumura
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
NEWS | 8 ++++++--
R/lower2R.R | 7 ++++---
4 files changed, 17 insertions(+), 12 deletions(-)
Title: Partial Least Squares Data Analysis Methods
Diff between plspm versions 0.2-0 dated 2011-12-19 and 0.2-1 dated 2012-01-03
Description: Partial Least Squares (PLS) methods with emphasis on structural equation models with latent variables.
Author: Gaston Sanchez
Maintainer: Gaston Sanchez
DESCRIPTION | 10 +++++-----
MD5 | 6 +++---
man/plspm-package.Rd | 6 +++---
man/russett.Rd | 2 +-
4 files changed, 12 insertions(+), 12 deletions(-)
Title: Analysis of Mark-Recapture data
Diff between mra versions 2.7 dated 2010-07-30 and 2.9 dated 2012-01-03
Description: Analysis of mark-recapture data using covariates. Models: CJS open population; Huggin's closed population. Link functions: logit, sine, hazard. Model selection and model averaging routines. Plot methods. Simulation routine. CJS methods produce estimates of population size using the Horvitz-Thompson estimator.
Author: Trent McDonald
Maintainer: Trent McDonald
mra-2.7/mra/R/F.cr.gof.R |only
mra-2.9/mra/DESCRIPTION | 15
mra-2.9/mra/MD5 |only
mra-2.9/mra/NAMESPACE |only
mra-2.9/mra/R/F.cjs.gof.R |only
mra-2.9/mra/R/F.cjs.simulate.r | 25
mra-2.9/mra/R/F.huggins.estim.R | 22
mra-2.9/mra/R/print.hug.R | 2
mra-2.9/mra/R/zzz.R | 10
mra-2.9/mra/data/dipper.data.rda |binary
mra-2.9/mra/data/dipper.histories.rda |binary
mra-2.9/mra/data/dipper.males.rda |binary
mra-2.9/mra/man/F.cjs.estim.Rd | 31
mra-2.9/mra/man/F.cjs.simulate.Rd | 144 +--
mra-2.9/mra/man/F.huggins.estim.Rd | 36
mra-2.9/mra/man/mra-package.Rd | 8
mra-2.9/mra/src/Mrawin.f90 | 1606 ++++++++++++++++------------------
17 files changed, 985 insertions(+), 914 deletions(-)
Title: Bayesian Model Averaging for Multinomial Logit Models
Diff between mlogitBMA versions 0.1-3 dated 2011-01-03 and 0.1-4 dated 2012-01-03
Description: Provides a modified function bic.glm of the BMA package that can be applied to multinomial logit (MNL) data. The data is converted to binary logit using the Begg & Gray approximation. The package also contains functions for maximum likelihood estimation of MNL.
Author: Hana Sevcikova, Adrian Raftery
Maintainer: Hana Sevcikova
CHANGELOG | 3 +++
DESCRIPTION | 16 ++++++----------
MD5 |only
inst/doc/conversion.pdf |binary
man/mlogitBMA-package.Rd | 4 ++--
5 files changed, 11 insertions(+), 12 deletions(-)
Title: Analysis with the Constant Elasticity of Scale (CES) function
Diff between micEconCES versions 0.9-4 dated 2011-07-04 and 0.9-6 dated 2012-01-03
Description: Tools for economic analysis and economic modelling with a Constant Elasticity of Scale (CES) function
Author: Arne Henningsen and Geraldine Henningsen
Maintainer: Arne Henningsen
micEconCES-0.9-4/micEconCES/inst/doc/CES-deriv.tex |only
micEconCES-0.9-4/micEconCES/inst/doc/CES-nested3-elaSub.tex |only
micEconCES-0.9-4/micEconCES/inst/doc/CES-nested4-elaSub.tex |only
micEconCES-0.9-4/micEconCES/inst/doc/kemfert98.R |only
micEconCES-0.9-4/micEconCES/inst/doc/references.bib |only
micEconCES-0.9-4/micEconCES/inst/doc/tables |only
micEconCES-0.9-6/micEconCES/DESCRIPTION | 13 -
micEconCES-0.9-6/micEconCES/MD5 |only
micEconCES-0.9-6/micEconCES/NEWS | 10
micEconCES-0.9-6/micEconCES/R/plot.cesEst.R | 58 ++++-
micEconCES-0.9-6/micEconCES/data/GermanIndustry.tab.gz |binary
micEconCES-0.9-6/micEconCES/inst/CITATION |only
micEconCES-0.9-6/micEconCES/inst/doc/CES.pdf |binary
micEconCES-0.9-6/micEconCES/man/plot.cesEst.Rd | 10
micEconCES-0.9-6/micEconCES/tests/GermanIndustry.Rout.save | 133 +++++-------
micEconCES-0.9-6/micEconCES/tests/SunHenKum.Rout.save | 26 --
micEconCES-0.9-6/micEconCES/tests/rhoZero.Rout.save | 26 --
micEconCES-0.9-6/micEconCES/tests/rhoZeroMult.Rout.save | 26 --
micEconCES-0.9-6/micEconCES/tests/simData.Rout.save | 36 ---
micEconCES-0.9-6/micEconCES/tests/xMult.Rout.save | 26 --
micEconCES-0.9-6/micEconCES/vignettes |only
21 files changed, 165 insertions(+), 199 deletions(-)
Title: Korean NLP Package
Diff between KoNLP versions 0.0-8.1 dated 2011-12-21 and 0.0-8.3 dated 2012-01-03
Description: Korean Language Processing, An interface to Hannanum korean
analyzer.(http://semanticweb.kaist.ac.kr/home/index.php/HanNanum), An
interface to Korean Lucene
analyzer.(http://sourceforge.net/projects/lucenekorean/). And some other
functions.
Author: Heewon Jeon
Maintainer: Heewon Jeon
KoNLP-0.0-8.1/KoNLP/inst/javasrc/org/apache/lucene/search/spell/package.html |only
KoNLP-0.0-8.1/KoNLP/tests |only
KoNLP-0.0-8.3/KoNLP/DESCRIPTION | 13
KoNLP-0.0-8.3/KoNLP/MD5 | 62
KoNLP-0.0-8.3/KoNLP/NAMESPACE | 4
KoNLP-0.0-8.3/KoNLP/NEWS | 9
KoNLP-0.0-8.3/KoNLP/R/KoAnalyzerRun.R | 221 ++-
KoNLP-0.0-8.3/KoNLP/R/manageDic.R |only
KoNLP-0.0-8.3/KoNLP/R/onLoad.R | 24
KoNLP-0.0-8.3/KoNLP/inst/java/junit-4.10.jar |only
KoNLP-0.0-8.3/KoNLP/inst/java/ko.jar |binary
KoNLP-0.0-8.3/KoNLP/inst/javasrc/.classpath |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/.project |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/.settings |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/HannanumInterface.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/HannanumInterface.java | 447 +++---
KoNLP-0.0-8.3/KoNLP/inst/javasrc/Ko.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/Ko.java | 55
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/KoLevensteinDistance.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/KoLevensteinDistance.java | 696 ++++++----
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/HangulException.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/HangulException.java | 18
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/HangulTest.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/HangulTest.java | 85 -
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$1.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$2.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$3.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$4.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$5.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$6.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul.java | 604 +++++---
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulAnalyzer.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulAnalyzer.java | 21
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulAutomata.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulAutomata.java |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulSepllTokenizer$chType.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulSepllTokenizer.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoHangulSepllTokenizer.java | 295 ++--
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoJamoAutomata.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoJamoAutomata.java |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoJamoAutomataTest.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoJamoAutomataTest.java |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoKeystrokeAutomata.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoKeystrokeAutomata.java |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoKeystrokeAutomataTest.class |only
KoNLP-0.0-8.3/KoNLP/inst/javasrc/org/apache/lucene/search/spell/korean/KoKeystrokeAutomataTest.java |only
KoNLP-0.0-8.3/KoNLP/man/HangulAutomata.Rd |only
KoNLP-0.0-8.3/KoNLP/man/detectInputEncoding.Rd |only
KoNLP-0.0-8.3/KoNLP/man/is.hangul.Rd | 5
KoNLP-0.0-8.3/KoNLP/man/reloadAllDic.Rd |only
51 files changed, 1693 insertions(+), 866 deletions(-)
Title: Functions for characterizing subgroup analyses with
meta-analysis
Diff between ipdmeta versions 2.1 dated 2011-01-31 and 2.2 dated 2012-01-03
Description: Assess heterogeneity of covariates defining subgroups; estimate the power of a treatment-covariate interaction for an individual patient data meta-analysis using aggregate data
Author: S. Kovalchik
Maintainer: S. Kovalchik
ipdmeta-2.1/ipdmeta/R/bas.haz.R |only
ipdmeta-2.1/ipdmeta/R/beta.indices.R |only
ipdmeta-2.1/ipdmeta/R/ci.R |only
ipdmeta-2.1/ipdmeta/R/cluster.subvector.matrix.R |only
ipdmeta-2.1/ipdmeta/R/coxmcem.R |only
ipdmeta-2.1/ipdmeta/R/frailty.model.matrix.R |only
ipdmeta-2.1/ipdmeta/R/make.clustered.ipd.R |only
ipdmeta-2.1/ipdmeta/R/mlma.R |only
ipdmeta-2.1/ipdmeta/R/surv.covariance.variance.R |only
ipdmeta-2.1/ipdmeta/R/which.formula.R |only
ipdmeta-2.1/ipdmeta/beta.man |only
ipdmeta-2.1/ipdmeta/data/cancer.rats.RData |only
ipdmeta-2.1/ipdmeta/data/ipd.data.RData |only
ipdmeta-2.1/ipdmeta/data/meta.data.RData |only
ipdmeta-2.1/ipdmeta/data/mixed.biased.RData |only
ipdmeta-2.1/ipdmeta/inst |only
ipdmeta-2.1/ipdmeta/man/bas.haz.Rd |only
ipdmeta-2.1/ipdmeta/man/beta.indices.Rd |only
ipdmeta-2.1/ipdmeta/man/cancer.rats.Rd |only
ipdmeta-2.1/ipdmeta/man/ci.Rd |only
ipdmeta-2.1/ipdmeta/man/cluster.subvector.matrix.Rd |only
ipdmeta-2.1/ipdmeta/man/coxmcem.Rd |only
ipdmeta-2.1/ipdmeta/man/frailty.model.matrix.Rd |only
ipdmeta-2.1/ipdmeta/man/ipd.data.Rd |only
ipdmeta-2.1/ipdmeta/man/make.clustered.ipd.Rd |only
ipdmeta-2.1/ipdmeta/man/meta.data.Rd |only
ipdmeta-2.1/ipdmeta/man/mixed.biased.Rd |only
ipdmeta-2.1/ipdmeta/man/mlma.Rd |only
ipdmeta-2.1/ipdmeta/man/surv.covariance.variance.Rd |only
ipdmeta-2.1/ipdmeta/man/which.formula.Rd |only
ipdmeta-2.1/ipdmeta/vignette |only
ipdmeta-2.2/ipdmeta/DESCRIPTION | 18 ++++++++----------
ipdmeta-2.2/ipdmeta/MD5 |only
ipdmeta-2.2/ipdmeta/NAMESPACE | 10 ----------
ipdmeta-2.2/ipdmeta/beta/bas.haz.R |only
ipdmeta-2.2/ipdmeta/beta/beta.indices.R |only
ipdmeta-2.2/ipdmeta/beta/ci.R |only
ipdmeta-2.2/ipdmeta/beta/cluster.subvector.matrix.R |only
ipdmeta-2.2/ipdmeta/beta/coxmcem.R |only
ipdmeta-2.2/ipdmeta/beta/frailty.model.matrix.R |only
ipdmeta-2.2/ipdmeta/beta/make.clustered.ipd.R |only
ipdmeta-2.2/ipdmeta/beta/mlma.R |only
ipdmeta-2.2/ipdmeta/beta/surv.covariance.variance.R |only
ipdmeta-2.2/ipdmeta/beta/which.formula.R |only
ipdmeta-2.2/ipdmeta/man/Qt.Rd | 2 +-
ipdmeta-2.2/ipdmeta/man/get.diag.Rd | 2 +-
ipdmeta-2.2/ipdmeta/man/ipd.sep.Rd | 2 +-
ipdmeta-2.2/ipdmeta/man/ipdmeta-package.Rd | 13 +++++--------
ipdmeta-2.2/ipdmeta/man/poynard.Rd | 2 +-
49 files changed, 17 insertions(+), 32 deletions(-)
Title: General Smoothing Splines
Diff between gss versions 2.0-6 dated 2011-12-21 and 2.0-7 dated 2012-01-03
Description: A comprehensive package for structural multivariate
function estimation using smoothing splines.
Author: Chong Gu
Maintainer: Chong Gu
ChangeLog | 8 ++++
DESCRIPTION | 8 ++--
MD5 | 10 ++---
R/hzdrate.sshzd.R | 90 ++++++++++++++++++++++++++++++++++++++++++---------
R/sscden.R | 23 +++++++------
man/hzdrate.sshzd.Rd | 8 ++--
6 files changed, 110 insertions(+), 37 deletions(-)
Title: Tools for spatial data
Diff between fields versions 6.6.2 dated 2011-11-17 and 6.6.3 dated 2012-01-03
Description: Fields is for curve, surface and function
fitting with an emphasis on splines, spatial data and spatial
statistics. The major methods include cubic, robust, and thin plate
splines, and Kriging for large data sets. The splines and Kriging
methods are supporting by functions that can determine the smoothing
parameter (nugget and sill variance) by cross validation and also by
restricted maximum likelihood. A major feature is that any
covariance function implemented in R with the fields interface can be
used for spatial prediction. Some tailored optimization functions are
supplied for find the MLEs for the Matern family of covariances.
There are also many useful functions for plotting and working with
spatial data as images. This package also contains an implementation
of a sparse matrix methods for large data sets and currently requires
the sparse matrix (spam) package for testing (but not for the
standard spatial functions.) Use help(fields) to get started and for
an overview. The fields source code is heavily commented and should
provide useful explanation of numerical details in addition to the
manual pages.
Author: Reinhard Furrer, Douglas Nychka and Stephen Sain
Maintainer: Doug Nychka
fields-6.6.2/fields/R/lonlat2xy.R |only
fields-6.6.3/fields/DESCRIPTION | 6 +--
fields-6.6.3/fields/MD5 | 19 ++++------
fields-6.6.3/fields/R/Tps.R | 2 -
fields-6.6.3/fields/R/image2lz.R | 30 ++--------------
fields-6.6.3/fields/R/in.poly.R | 3 +
fields-6.6.3/fields/R/tim.colors.R | 5 ++
fields-6.6.3/fields/man/Tps.Rd | 45 +++++++++++++++++++-----
fields-6.6.3/fields/man/fields-internal.Rd | 5 --
fields-6.6.3/fields/man/fields.Rd | 7 +--
fields-6.6.3/fields/man/image.plot.Rd | 54 ++++++++++++++++-------------
11 files changed, 94 insertions(+), 82 deletions(-)
Title: Parsing and evaluation tools that provide more details than the
default.
Diff between evaluate versions 0.4 dated 2011-11-03 and 0.4.1 dated 2012-01-03
Description: Parsing and evaluation tools that make it easy
to recreate the command line behaviour of R.
Author: Hadley Wickham
Maintainer: Hadley Wickham
DESCRIPTION | 6 +++---
MD5 | 6 +++---
NEWS | 5 +++++
tests/test-all.R | 2 +-
4 files changed, 12 insertions(+), 7 deletions(-)
Title: Bayesian nonparametric modeling in R
Diff between DPpackage versions 1.1-3 dated 2011-04-04 and 1.1-4 dated 2012-01-03
Description: This package contains functions to perform inference via
simulation from the posterior distributions for Bayesian
nonparametric and semiparametric models. Although the name of
the package was motivated by the Dirichlet Process prior, the
package considers and will consider other priors on functional
spaces. So far, DPpackage includes models considering Dirichlet
Processes, Dependent Dirichlet Processes, Dependent Poisson-
Dirichlet Processes, Hierarchical Dirichlet Processes, Polya Trees,
Linear Dependent Tailfree Processes,
Mixtures of Triangular distributions,
Random Bernstein polynomials priors and Dependent Bernstein Polynomials.
The package also includes
models considering Penalized B-Splines. Currently the package
includes semiparametric models for marginal and conditional density
estimation, ROC curve analysis, interval censored data, binary
regression models, generalized linear mixed models, IRT type
models, and generalized additive models. The package also contains
functions to compute Pseudo-Bayes factors for model comparison,
and to elicitate the precision parameter of the Dirichlet
Process. To maximize computational efficiency, the actual
sampling for each model is done in compiled FORTRAN. The
functions return objects which can be subsequently analyzed
with functions provided in the coda package.
Author: Alejandro Jara
Maintainer: Alejandro Jara
DPpackage-1.1-3/DPpackage/src/ToolsARS.f |only
DPpackage-1.1-4/DPpackage/DESCRIPTION | 49 +
DPpackage-1.1-4/DPpackage/LICENSE | 8
DPpackage-1.1-4/DPpackage/MD5 |only
DPpackage-1.1-4/DPpackage/NAMESPACE | 25
DPpackage-1.1-4/DPpackage/R/DPlmm.R | 12
DPpackage-1.1-4/DPpackage/R/LDDPdensity.R | 81 ++
DPpackage-1.1-4/DPpackage/R/LDDProc.R |only
DPpackage-1.1-4/DPpackage/R/LDDPsurvival.R | 63 +-
DPpackage-1.1-4/DPpackage/R/LDTFPdensity.R |only
DPpackage-1.1-4/DPpackage/R/LDTFPsurvival.R |only
DPpackage-1.1-4/DPpackage/R/PTlm.R | 437 ++++++++--------
DPpackage-1.1-4/DPpackage/R/PTsampler.R | 12
DPpackage-1.1-4/DPpackage/R/hidden.R | 22
DPpackage-1.1-4/DPpackage/data/bir.rda |binary
DPpackage-1.1-4/DPpackage/data/calgb.pred.rda |binary
DPpackage-1.1-4/DPpackage/data/calgb.rda |binary
DPpackage-1.1-4/DPpackage/data/deterioration.rda |binary
DPpackage-1.1-4/DPpackage/data/fleabeetles.rda |binary
DPpackage-1.1-4/DPpackage/data/fractionation.rda |binary
DPpackage-1.1-4/DPpackage/data/galaxy.rda |binary
DPpackage-1.1-4/DPpackage/data/hiv.rda |binary
DPpackage-1.1-4/DPpackage/data/igg.rda |only
DPpackage-1.1-4/DPpackage/data/indon.rda |binary
DPpackage-1.1-4/DPpackage/data/nodal.rda |binary
DPpackage-1.1-4/DPpackage/data/orings.rda |binary
DPpackage-1.1-4/DPpackage/data/psychiatric.rda |binary
DPpackage-1.1-4/DPpackage/data/rats.rda |binary
DPpackage-1.1-4/DPpackage/data/rolling.rda |binary
DPpackage-1.1-4/DPpackage/data/schoolgirls.rda |binary
DPpackage-1.1-4/DPpackage/data/seizures.rda |binary
DPpackage-1.1-4/DPpackage/data/sports.rda |binary
DPpackage-1.1-4/DPpackage/data/toenail.rda |only
DPpackage-1.1-4/DPpackage/data/uniond.rda |binary
DPpackage-1.1-4/DPpackage/man/BDPdensity.Rd | 3
DPpackage-1.1-4/DPpackage/man/DPMdencens.Rd | 3
DPpackage-1.1-4/DPpackage/man/DPMlmm.Rd | 11
DPpackage-1.1-4/DPpackage/man/DPMmeta.Rd | 3
DPpackage-1.1-4/DPpackage/man/DPMolmm.Rd | 9
DPpackage-1.1-4/DPpackage/man/DPMrandom.Rd | 11
DPpackage-1.1-4/DPpackage/man/DPMrasch.Rd | 11
DPpackage-1.1-4/DPpackage/man/DPMraschpoisson.Rd | 3
DPpackage-1.1-4/DPpackage/man/DPbinary.Rd | 5
DPpackage-1.1-4/DPpackage/man/DPcdensity.Rd | 4
DPpackage-1.1-4/DPpackage/man/DPdensity.Rd | 39 -
DPpackage-1.1-4/DPpackage/man/DPglmm.Rd | 22
DPpackage-1.1-4/DPpackage/man/DPlmm.Rd | 10
DPpackage-1.1-4/DPpackage/man/DPmultmeta.Rd | 11
DPpackage-1.1-4/DPpackage/man/DPolmm.Rd | 15
DPpackage-1.1-4/DPpackage/man/DPpsBF.Rd | 39 -
DPpackage-1.1-4/DPpackage/man/DPrasch.Rd | 3
DPpackage-1.1-4/DPpackage/man/DPraschpoisson.Rd | 3
DPpackage-1.1-4/DPpackage/man/FPTbinary.Rd | 28 -
DPpackage-1.1-4/DPpackage/man/FPTrasch.Rd | 9
DPpackage-1.1-4/DPpackage/man/FPTraschpoisson.Rd | 7
DPpackage-1.1-4/DPpackage/man/HDPMcdensity.Rd | 3
DPpackage-1.1-4/DPpackage/man/HDPMdensity.Rd | 4
DPpackage-1.1-4/DPpackage/man/LDBDPdensity.Rd | 18
DPpackage-1.1-4/DPpackage/man/LDDPdensity.Rd | 51 +
DPpackage-1.1-4/DPpackage/man/LDDPrasch.Rd | 33 -
DPpackage-1.1-4/DPpackage/man/LDDPraschpoisson.Rd | 31 -
DPpackage-1.1-4/DPpackage/man/LDDProc.Rd |only
DPpackage-1.1-4/DPpackage/man/LDDPsurvival.Rd | 30 -
DPpackage-1.1-4/DPpackage/man/LDTFPdensity.Rd |only
DPpackage-1.1-4/DPpackage/man/LDTFPsurvival.Rd |only
DPpackage-1.1-4/DPpackage/man/PTdensity.Rd | 18
DPpackage-1.1-4/DPpackage/man/igg.Rd |only
DPpackage-1.1-4/DPpackage/man/toenail.Rd |only
DPpackage-1.1-4/DPpackage/src/BDPdensity.f | 2
DPpackage-1.1-4/DPpackage/src/CSDPbinaryl.f | 2
DPpackage-1.1-4/DPpackage/src/DPMglmmlogit.f | 2
DPpackage-1.1-4/DPpackage/src/DPMraschpoisson.f | 2
DPpackage-1.1-4/DPpackage/src/DPbinaryc.f | 2
DPpackage-1.1-4/DPpackage/src/DPunimdensity.f |only
DPpackage-1.1-4/DPpackage/src/LDDPdensity.f | 598 ++++++++++++++++++----
DPpackage-1.1-4/DPpackage/src/LDDPsurvival.f | 299 +++++++----
DPpackage-1.1-4/DPpackage/src/LDPDdoublyintsba.f | 2
DPpackage-1.1-4/DPpackage/src/LDTFPdensity.f |only
DPpackage-1.1-4/DPpackage/src/LDTFPsurvival.f |only
DPpackage-1.1-4/DPpackage/src/PTudensityp.f | 2
DPpackage-1.1-4/DPpackage/src/RSBAdensity.f |only
DPpackage-1.1-4/DPpackage/src/RSBAdensitycv.f |only
DPpackage-1.1-4/DPpackage/src/RSBAglmmlogit.f |only
DPpackage-1.1-4/DPpackage/src/RSBAlm.f |only
DPpackage-1.1-4/DPpackage/src/ToolsCDF.f |only
DPpackage-1.1-4/DPpackage/src/ToolsCdflib.f | 18
DPpackage-1.1-4/DPpackage/src/ToolsDP.f | 2
DPpackage-1.1-4/DPpackage/src/ToolsLDTFP.f |only
DPpackage-1.1-4/DPpackage/src/ToolsProbf90.f90 |only
DPpackage-1.1-4/DPpackage/src/ToolsRSBA.f |only
DPpackage-1.1-4/DPpackage/src/ToolsRandlib.f | 149 ++---
DPpackage-1.1-4/DPpackage/src/ToolsRfun.c | 2
DPpackage-1.1-4/DPpackage/src/ToolsSparseMatrix.f | 5
DPpackage-1.1-4/DPpackage/src/ToolsStat.f | 2
DPpackage-1.1-4/DPpackage/src/ToolsTDP.f | 2
95 files changed, 1470 insertions(+), 767 deletions(-)
Title: Cramer-von Mises Two Sample Tests
Diff between CvM2SL2Test versions 0.1-1 dated 2010-12-01 and 2.0-1 dated 2012-01-03
Description: The package contains two functions: one computes the Cramer-von Mises
two sample test scores, the other cmoputes the exact p-value(s) for given
Cramer-von Mises two-sample test score(s) under the assumption that
the populations under comparison have the same probability distribution.
Like Kolmogorov-Smirnov two-sample test, Cramer-von Mises test
is also distribution free. In certain cases, the Cramer-von Mises test
is more powerful than the Kolmogorov-Smirnov test, but it is less widely
used than the latter.
Author: Yuanhui Xiao
Maintainer: Yuanhui Xiao
DESCRIPTION | 31 +++++++++++++++----------------
MD5 |only
R/CvMTestPVals.R | 20 +++++++++++++-------
R/CvMTestScore.R | 18 ++++++++++++------
man/cvmts.pval.Rd | 4 ++--
man/cvmts.test.Rd | 4 ++--
src/XCVM.cc | 4 ++--
7 files changed, 46 insertions(+), 35 deletions(-)
Title: L1-version of Cramer-von Mises Two Sample Tests
Diff between CvM2SL1Test versions 0.1-1 dated 2010-12-01 and 2.0-1 dated 2012-01-03
Description: The package contains two functions for L1-version of
Cramer-von Mises Tests: one computes Cramer-von Mises
two sample test scores, the other cmoputes the exact p-value(s) for given
Cramer-von Mises two-sample test score(s) under the assumption that
the populations under comparison have the same probability distribution.
The L1-version Cramer-von Mises test, like its L2 counterpart,
is distribution-free, but of less computational intensity. In certain cases,
this version of Cramer-von Mises test is almost as powerful as its L2 counterpart.
Simulation study also shows that it is more powerful than the Kolmogorov-Smirnov
test in certain cases.
Author: Yuanhui Xiao
Maintainer: Yuanhui Xiao
DESCRIPTION | 35 ++++------
MD5 |only
R/CvMTestPVals.R | 22 +++---
R/CvMTestScore.R | 18 ++---
man/cvmtsl1.pval.Rd | 4 -
man/cvmtsl1.test.Rd | 4 -
src/XCVML1.cc | 6 -
src/XFreqFunct.h | 178 ++++++++++++++++++++++++++--------------------------
8 files changed, 136 insertions(+), 131 deletions(-)
Title: Algorithms for Quantitative Pedology
Diff between aqp versions 0.99-9 dated 2011-12-27 and 0.99-9.1 dated 2012-01-03
Description: A collection of algorithms related to modeling of soil resources, soil classification, soil profile aggregation, and visualization.
Author: Dylan Beaudette
Maintainer: Dylan Beaudette
aqp-0.99-9.1/aqp/DESCRIPTION | 15 +--
aqp-0.99-9.1/aqp/MD5 | 47 ++++-------
aqp-0.99-9.1/aqp/NEWS | 10 ++
aqp-0.99-9.1/aqp/R/Class-SoilProfileCollection.R | 40 +--------
aqp-0.99-9.1/aqp/R/SoilProfileCollection-iterators.R |only
aqp-0.99-9.1/aqp/R/SoilProfileCollection-methods.R | 21 ++++-
aqp-0.99-9.1/aqp/R/SoilProfileCollection-slice-methods.R | 7 +
aqp-0.99-9.1/aqp/R/SoilProfileCollection-spatial.R | 47 +++++------
aqp-0.99-9.1/aqp/R/profile_plot.R | 31 ++++---
aqp-0.99-9.1/aqp/R/setters.R | 42 ++++++++--
aqp-0.99-9.1/aqp/R/test_hz_logic.R |only
aqp-0.99-9.1/aqp/TODO | 2
aqp-0.99-9.1/aqp/data/sp5.rda |binary
aqp-0.99-9.1/aqp/inst/doc/aqp-intro.pdf |binary
aqp-0.99-9.1/aqp/inst/doc/aqp-vignette.pdf |binary
aqp-0.99-9.1/aqp/man/SPC-plotting.Rd | 16 ++-
aqp-0.99-9.1/aqp/man/SPC-utils.Rd | 61 +++++++--------
aqp-0.99-9.1/aqp/man/SoilProfileCollection-class.Rd | 9 +-
aqp-0.99-9.1/aqp/man/profileApply-methods.Rd |only
aqp-0.99-9.1/aqp/man/sp5.Rd | 21 +++--
aqp-0.99-9/aqp/R/MUKEYS_by_ll_bbox.R |only
aqp-0.99-9/aqp/R/NASIS_functions.R |only
aqp-0.99-9/aqp/R/SDA_query.R |only
aqp-0.99-9/aqp/R/mapunit_geom_by_ll_bbox.R |only
aqp-0.99-9/aqp/R/pedonPC_functions.R |only
aqp-0.99-9/aqp/man/MUKEYS_by_ll_bbox.Rd |only
aqp-0.99-9/aqp/man/SDA_query.Rd |only
aqp-0.99-9/aqp/man/get_colors_from_pedon_db.Rd |only
aqp-0.99-9/aqp/man/get_hz_data_from_pedon_db.Rd |only
aqp-0.99-9/aqp/man/get_site_data_from_pedon_db.Rd |only
aqp-0.99-9/aqp/man/get_veg_from_AK_Site.Rd |only
aqp-0.99-9/aqp/man/mapunit_geom_by_ll_bbox.Rd |only
32 files changed, 208 insertions(+), 161 deletions(-)
Title: R package to use Amazon Web Services
Diff between AWS.tools versions 0.0.2 dated 2011-10-06 and 0.0.5 dated 2012-01-03
Description: R package for Amazon Web Services EC2/S3
Author: Whit Armstrong
Maintainer: Whit Armstrong
AWS.tools-0.0.2/AWS.tools/man/get.master.Rd |only
AWS.tools-0.0.5/AWS.tools/DESCRIPTION | 7 +-
AWS.tools-0.0.5/AWS.tools/MD5 | 17 ++---
AWS.tools-0.0.5/AWS.tools/NAMESPACE | 1
AWS.tools-0.0.5/AWS.tools/R/ec2.controler.R | 86 ++++++++++++++++++--------
AWS.tools-0.0.5/AWS.tools/README.rst | 2
AWS.tools-0.0.5/AWS.tools/man/ec2din.Rd | 11 ++-
AWS.tools-0.0.5/AWS.tools/man/s3.cmds.Rd | 39 +++++++++--
AWS.tools-0.0.5/AWS.tools/man/startCluster.Rd | 15 +++-
AWS.tools-0.0.5/AWS.tools/man/stopCluster.Rd | 11 ++-
10 files changed, 134 insertions(+), 55 deletions(-)