Title: Weighted Correlation Network Analysis
Diff between WGCNA versions 1.18 dated 2011-12-24 and 1.18-1 dated 2012-01-04
Description: Functions necessary to perform Weighted Correlation Network Analysis
Author: Peter Langfelder
Maintainer: Peter Langfelder
Changelog | 5 +++++
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
R/GOenrichmentAnalysis.R | 3 ++-
man/WGCNA-package.Rd | 4 ++--
5 files changed, 17 insertions(+), 11 deletions(-)
Title: Walk Score and Transit Score API
Diff between walkscoreAPI versions 1.1 dated 2011-10-14 and 1.2 dated 2012-01-04
Description: A collection of functions to perform the Application Programming Interface (API) calls associated with the Walk Score website (www.walkscore.com) within the R environment. These functions can be used to query the Walk Score and Transit Score database for a wide variety of information using R scripts. This package includes the simple Walk Score and Transit Score API calls, which return the scores associated with an input location, as well as calls which return some data used to calculate the scores. These functions are especially useful for mass data collection and gathering Walk Score and Transit Score values for large lists of locations.
Author: John Whalen
Maintainer: John Whalen
DESCRIPTION | 20 +++++---------------
MD5 | 6 +++---
R/getWS.R | 2 +-
man/walkscoreAPI-package.Rd | 6 +++---
4 files changed, 12 insertions(+), 22 deletions(-)
Title: Ridge regression and other kernels for genomic selection
Diff between rrBLUP versions 3.0 dated 2012-01-04 and 3.1 dated 2012-01-04
Description: One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on kinship. The genetic covariance between lines can be modeled using a marker-based, additive relationship matrix, or via Gaussian and exponential kernels.
Author: Jeffrey Endelman
Maintainer: Jeffrey Endelman
DESCRIPTION | 6 +++---
MD5 | 6 +++---
NEWS | 4 ++++
R/A.mat.R | 6 +++++-
4 files changed, 15 insertions(+), 7 deletions(-)
Title: Korean NLP Package
Diff between KoNLP versions 0.0-8.3 dated 2012-01-03 and 0.0-9.0 dated 2012-01-04
Description: Korean Language Processing, An interface to Hannanum korean
analyzer.(http://semanticweb.kaist.ac.kr/home/index.php/HanNanum), An
interface to Korean Lucene
analyzer.(http://sourceforge.net/projects/lucenekorean/). And some other
functions.
Author: Heewon Jeon
Maintainer: Heewon Jeon
DESCRIPTION | 8 +-
MD5 | 30 +++----
NAMESPACE | 2
NEWS | 9 +-
R/KoAnalyzerRun.R | 8 +-
inst/java/ko.jar |binary
inst/javasrc/org/apache/lucene/search/spell/korean/HangulTest.class |binary
inst/javasrc/org/apache/lucene/search/spell/korean/HangulTest.java | 2
inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul$3.class |binary
inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul.class |binary
inst/javasrc/org/apache/lucene/search/spell/korean/KoHangul.java | 25 +++---
inst/javasrc/org/apache/lucene/search/spell/korean/KoJamoAutomata.class |binary
inst/javasrc/org/apache/lucene/search/spell/korean/KoJamoAutomata.java | 40 ++++------
inst/javasrc/org/apache/lucene/search/spell/korean/KoKeystrokeAutomata.class |binary
inst/javasrc/org/apache/lucene/search/spell/korean/KoKeystrokeAutomata.java | 37 +++------
man/convertHangulStringToKeyStrokes.Rd | 6 +
16 files changed, 86 insertions(+), 81 deletions(-)
Title: Heteroscedastic t-regression
Diff between hett versions 0.3 dated 2009-02-25 and 0.3-1 dated 2012-01-04
Description: Functions for the fitting and summarizing of heteroscedastic t-regression.
Author: Julian Taylor
Maintainer: Julian Taylor
hett-0.3-1/hett/DESCRIPTION | 23 ++++++++++++-----------
hett-0.3-1/hett/MD5 |only
hett-0.3-1/hett/NAMESPACE |only
hett-0.3-1/hett/data/mm.rda |only
hett-0.3-1/hett/data/rent.rda |only
hett-0.3-1/hett/man/hett-internal.Rd | 5 ++---
hett-0.3-1/hett/man/tlm.Rd | 32 +++++++++++++++++---------------
hett-0.3-1/hett/man/tlm.control.Rd | 9 +++------
hett-0.3/hett/data/mm.R |only
hett-0.3/hett/data/rent.R |only
10 files changed, 34 insertions(+), 35 deletions(-)
Title: Imputation of missing values through a forward imputation
algorithm
Diff between ForImp versions 1.0 dated 2011-06-15 and 1.0-1 dated 2012-01-04
Description: Imputation of missing values in datasets of ordinal variables through a forward imputation algorithm
Author: Alessandro Barbiero, Giancarlo Manzi, Pier Alda Ferrari
Maintainer: Alessandro Barbiero
DESCRIPTION | 12 ++++++------
MD5 |only
doc/ForImp-manual.pdf |binary
man/ForImp-package.Rd | 15 ++++-----------
man/ForImp.Rd | 5 -----
man/ld.Rd | 10 +---------
man/meanimp.Rd | 17 +----------------
man/medianimp.Rd | 9 +--------
man/missingmat.Rd | 4 ----
man/missingmat2.Rd | 8 --------
man/missingness.Rd | 12 ------------
man/modeimp.Rd | 9 ---------
man/rancatmat.Rd | 9 ---------
man/transfmatcat.Rd | 6 ------
man/vcosw.Rd | 12 ------------
15 files changed, 13 insertions(+), 115 deletions(-)
Title: SOM networks for comparing patterns with peak shifts
Diff between wccsom versions 1.2.5 dated 2012-01-04 and 1.2.7 dated 2012-01-04
Description: SOM networks for comparing patterns with peak shifts.
Author: Ron Wehrens
Maintainer: Ron Wehrens
DESCRIPTION | 6 +++---
MD5 | 4 ++--
src/wccsom.c | 40 ++++++++++++++++------------------------
3 files changed, 21 insertions(+), 29 deletions(-)
Title: Six Sigma Tools for Quality and Process Improvement
Diff between SixSigma versions 0.4.0 dated 2011-09-20 and 0.5.0 dated 2012-01-04
Description: This package contains functions and utilities to perform Statistical Analysis in the Six Sigma way. Through the DMAIC cycle (Define, Measure, Analyze, Improve, Control), you can manage several Quality Management studies: Gage R&R, Capability Analysis, Control Charts, Reliability, Regression and Design of Experiments.
Author: Emilio L. Cano, Andres Redchuk, Javier M. Moguerza
Maintainer: Emilio L. Cano
SixSigma-0.4.0/SixSigma/data/ss.data.ccConstants.RData |only
SixSigma-0.4.0/SixSigma/man/ss.data.ccConstants.Rd |only
SixSigma-0.5.0/SixSigma/DESCRIPTION | 21 -
SixSigma-0.5.0/SixSigma/MD5 | 52 +-
SixSigma-0.5.0/SixSigma/NEWS | 19 -
SixSigma-0.5.0/SixSigma/R/auxf.R | 17
SixSigma-0.5.0/SixSigma/R/ss.ca.R | 216 ++++++++----
SixSigma-0.5.0/SixSigma/R/ss.cc.R |only
SixSigma-0.5.0/SixSigma/R/ss.ci.R | 179 ++++++---
SixSigma-0.5.0/SixSigma/R/ss.lfa.R | 7
SixSigma-0.5.0/SixSigma/R/ss.rr.R | 10
SixSigma-0.5.0/SixSigma/data/ss.data.pc.RData |only
SixSigma-0.5.0/SixSigma/data/ss.data.pc.big.RData |only
SixSigma-0.5.0/SixSigma/data/ss.data.pc.r.RData |only
SixSigma-0.5.0/SixSigma/data/ss.data.strings.RData |only
SixSigma-0.5.0/SixSigma/inst/doc/HelicopterInstructions.pdf |binary
SixSigma-0.5.0/SixSigma/inst/doc/helicopterDesign.pdf |binary
SixSigma-0.5.0/SixSigma/man/SixSigma-package.Rd | 104 +----
SixSigma-0.5.0/SixSigma/man/ss.ca.indices.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.ca.yield.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.cc.Rd |only
SixSigma-0.5.0/SixSigma/man/ss.ceDiag.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.ci.Rd | 33 +
SixSigma-0.5.0/SixSigma/man/ss.data.pc.Rd |only
SixSigma-0.5.0/SixSigma/man/ss.data.pc.big.Rd |only
SixSigma-0.5.0/SixSigma/man/ss.data.pc.r.Rd |only
SixSigma-0.5.0/SixSigma/man/ss.data.strings.Rd |only
SixSigma-0.5.0/SixSigma/man/ss.heli.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.lf.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.lfa.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.pMap.Rd | 5
SixSigma-0.5.0/SixSigma/man/ss.rr.Rd | 2
SixSigma-0.5.0/SixSigma/man/ss.study.ca.Rd | 17
33 files changed, 393 insertions(+), 301 deletions(-)
Title: Breiman and Cutler's random forests for classification and
regression
Diff between randomForest versions 4.6-4 dated 2011-12-20 and 4.6-5 dated 2012-01-04
Description: Classification and regression based on a forest of trees using random inputs.
Author: Fortran original by Leo Breiman and Adele Cutler, R port by Andy Liaw and Matthew Wiener.
Maintainer: Andy Liaw
DESCRIPTION | 10 +++++-----
MD5 | 8 ++++----
inst/NEWS | 5 +++++
man/randomForest.Rd | 4 ++++
src/rf.c | 4 ++--
5 files changed, 20 insertions(+), 11 deletions(-)
Title: Functions for medical statistics book with some demographic data
Diff between fmsb versions 0.3.0 dated 2011-12-28 and 0.3.1 dated 2012-01-04
Description: Several utility functions for the book entitled
"Practices of Medical and Health Data Analysis using R"
(Pearson Education Japan, 2007) with Japanese demographic
data and some demographic analysis related functions.
Author: Minato Nakazawa
Maintainer: Minato Nakazawa
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
NEWS | 4 ++++
R/demogjpn.R | 5 +++--
man/Denny.Rd | 6 +++---
5 files changed, 18 insertions(+), 13 deletions(-)
Title: Exponentially Modified Gaussian (EMG) Distribution
Diff between emg versions 1.0.4 dated 2011-12-14 and 1.0.5 dated 2012-01-04
Description: Provides basic distribution functions for a mixture model of a gaussian and exponential distribution.
Author: Shawn Garbett, Mark Kozdoba
Maintainer: Shawn Garbett
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/pemg.R | 2 +-
man/emg-package.Rd | 10 +++++++---
4 files changed, 15 insertions(+), 11 deletions(-)
Title: Exploratory Chemometrics for Spectroscopy
Diff between ChemoSpec versions 1.48-4 dated 2011-11-03 and 1.50-2 dated 2012-01-04
Description: A collection of functions for plotting spectra (NMR, IR etc) and carrying out various forms of top-down exploratory data analysis, such as HCA, PCA and model-based clustering. The design allows comparison of data from samples which fall into groups such as treatment vs. control. Robust methods appropriate for this type of high-dimensional data are available. ChemoSpec is designed to be very user friendly and suitable for people with limited background in R.
Author: Bryan A. Hanson DePauw University, Greencastle Indiana USA
Maintainer: Bryan A. Hanson
ChemoSpec-1.48-4/ChemoSpec/inst/doc/ChemoSpec.Rnw |only
ChemoSpec-1.48-4/ChemoSpec/vignettes |only
ChemoSpec-1.50-2/ChemoSpec/DESCRIPTION | 12 +--
ChemoSpec-1.50-2/ChemoSpec/MD5 | 26 +++----
ChemoSpec-1.50-2/ChemoSpec/NAMESPACE | 66 ++++++++++++++++++--
ChemoSpec-1.50-2/ChemoSpec/NEWS | 25 +++++++
ChemoSpec-1.50-2/ChemoSpec/R/LoopThruSpectra.R |only
ChemoSpec-1.50-2/ChemoSpec/R/baselineSpec.R |only
ChemoSpec-1.50-2/ChemoSpec/R/plotSpectra.R | 4 -
ChemoSpec-1.50-2/ChemoSpec/README.asciidoc |only
ChemoSpec-1.50-2/ChemoSpec/inst/doc/ChemoSpec.pdf |binary
ChemoSpec-1.50-2/ChemoSpec/man/ChemoSpec-package.Rd | 4 -
ChemoSpec-1.50-2/ChemoSpec/man/LoopThruSpectra.Rd |only
ChemoSpec-1.50-2/ChemoSpec/man/baselineSpec.Rd |only
ChemoSpec-1.50-2/ChemoSpec/man/hmapSpectra.Rd | 2
ChemoSpec-1.50-2/ChemoSpec/man/plotSpectra.Rd | 2
16 files changed, 112 insertions(+), 29 deletions(-)
Title: Tuned Data Mining in R
Diff between TDMR versions 0.1.2 dated 2011-12-06 and 0.1.3 dated 2012-01-04
Description: Tuned Data Mining in R (TDMR) performs a complete tuning of a data mining task.
Author: Wolfgang Konen
Maintainer: Patrick Koch
TDMR-0.1.2/TDMR/R/unbiasedBestRun_C.r |only
TDMR-0.1.2/TDMR/R/unbiasedBestRun_R.r |only
TDMR-0.1.2/TDMR/man/bind_response.Rd |only
TDMR-0.1.2/TDMR/man/cma_jTuner.Rd |only
TDMR-0.1.2/TDMR/man/print.TDMclassifier.Rd |only
TDMR-0.1.2/TDMR/man/print.TDMregressor.Rd |only
TDMR-0.1.2/TDMR/man/tdmMapDesSpot.Rd |only
TDMR-0.1.2/TDMR/man/unbiasedBestRun_C.Rd |only
TDMR-0.1.2/TDMR/man/unbiasedBestRun_O.Rd |only
TDMR-0.1.2/TDMR/man/unbiasedBestRun_R.Rd |only
TDMR-0.1.3/TDMR/DESCRIPTION | 29
TDMR-0.1.3/TDMR/MD5 | 164 ++--
TDMR-0.1.3/TDMR/NAMESPACE | 11
TDMR-0.1.3/TDMR/R/makeTdmRandomSeed.r | 22
TDMR-0.1.3/TDMR/R/printTDMclassifier.r |only
TDMR-0.1.3/TDMR/R/printTDMregressor.r |only
TDMR-0.1.3/TDMR/R/source.tdm.r | 18
TDMR-0.1.3/TDMR/R/tdmClassify.r | 456 +++++--------
TDMR-0.1.3/TDMR/R/tdmCompleteEval.r | 24
TDMR-0.1.3/TDMR/R/tdmDefaultsFill.r | 17
TDMR-0.1.3/TDMR/R/tdmDispatchTuner.r | 23
TDMR-0.1.3/TDMR/R/tdmGeneralUtils.r | 12
TDMR-0.1.3/TDMR/R/tdmGetObj.r | 20
TDMR-0.1.3/TDMR/R/tdmGraphicUtils.r | 60 -
TDMR-0.1.3/TDMR/R/tdmMapDesign.r | 46 -
TDMR-0.1.3/TDMR/R/tdmMetacostRf.r | 42 -
TDMR-0.1.3/TDMR/R/tdmModelingUtils.r | 55 -
TDMR-0.1.3/TDMR/R/tdmOptsDefaults.r | 217 +++++-
TDMR-0.1.3/TDMR/R/tdmParaBootstrap.r | 33
TDMR-0.1.3/TDMR/R/tdmPreprocUtils.r | 50 -
TDMR-0.1.3/TDMR/R/tdmReadData.r |only
TDMR-0.1.3/TDMR/R/tdmRegress.r | 90 --
TDMR-0.1.3/TDMR/R/tdmStartSpot.r | 19
TDMR-0.1.3/TDMR/R/unbiasedRun.r |only
TDMR-0.1.3/TDMR/demo/demo00sonar.r | 3
TDMR-0.1.3/TDMR/demo/demo01cpu.r | 3
TDMR-0.1.3/TDMR/demo/demo02sonar.r | 2
TDMR-0.1.3/TDMR/inst/demo01cpu/cpu.fin | 7
TDMR-0.1.3/TDMR/inst/demo01cpu/cpu_01.apd | 6
TDMR-0.1.3/TDMR/inst/demo01cpu/main_cpu.r | 11
TDMR-0.1.3/TDMR/inst/demo01cpu/script_all.R | 2
TDMR-0.1.3/TDMR/inst/demo01cpu/spot/cpu_01_spot_01.bst | 8
TDMR-0.1.3/TDMR/inst/demo01cpu/spot/cpu_01_spot_01.res | 55 -
TDMR-0.1.3/TDMR/inst/demo02sonar/data |only
TDMR-0.1.3/TDMR/inst/demo02sonar/main_sonar.r | 19
TDMR-0.1.3/TDMR/inst/demo02sonar/plotEnvtTwiddle.r |only
TDMR-0.1.3/TDMR/inst/demo02sonar/script_all.R | 2
TDMR-0.1.3/TDMR/inst/demo02sonar/sonar.fin |only
TDMR-0.1.3/TDMR/inst/demo02sonar/sonar_00.apd | 10
TDMR-0.1.3/TDMR/inst/demo02sonar/sonar_01.apd | 2
TDMR-0.1.3/TDMR/inst/demo02sonar/sonar_02.apd | 2
TDMR-0.1.3/TDMR/inst/demo02sonar/sonar_03.apd | 2
TDMR-0.1.3/TDMR/inst/demo02sonar/sonar_04.apd | 3
TDMR-0.1.3/TDMR/inst/demo02sonar/spot/sonar_04_spot_01.bst | 10
TDMR-0.1.3/TDMR/inst/demo02sonar/spot/sonar_04_spot_01.res | 80 +-
TDMR-0.1.3/TDMR/inst/doc/changes.html | 89 +-
TDMR-0.1.3/TDMR/inst/tdmMapDesign.csv | 20
TDMR-0.1.3/TDMR/man/bind-sub-response.Rd |only
TDMR-0.1.3/TDMR/man/cat1.Rd | 5
TDMR-0.1.3/TDMR/man/cat2.Rd | 5
TDMR-0.1.3/TDMR/man/cma-sub-jTuner.Rd |only
TDMR-0.1.3/TDMR/man/cmaesTuner.Rd | 2
TDMR-0.1.3/TDMR/man/makeTdmRandomSeed.Rd | 10
TDMR-0.1.3/TDMR/man/print-dot-TDMclassifier.Rd |only
TDMR-0.1.3/TDMR/man/print-dot-TDMregressor.Rd |only
TDMR-0.1.3/TDMR/man/print-dot-tdmClass.Rd |only
TDMR-0.1.3/TDMR/man/print-dot-tdmRegre.Rd |only
TDMR-0.1.3/TDMR/man/print1.Rd | 5
TDMR-0.1.3/TDMR/man/print2.Rd | 5
TDMR-0.1.3/TDMR/man/tdmClassify.Rd | 54 -
TDMR-0.1.3/TDMR/man/tdmClassifyLoop.Rd | 13
TDMR-0.1.3/TDMR/man/tdmClassifySummary.Rd | 2
TDMR-0.1.3/TDMR/man/tdmDefaultsFill.Rd | 13
TDMR-0.1.3/TDMR/man/tdmDispatchTuner.Rd | 17
TDMR-0.1.3/TDMR/man/tdmGetObj.Rd | 18
TDMR-0.1.3/TDMR/man/tdmGraAndLogFinalize.Rd | 2
TDMR-0.1.3/TDMR/man/tdmGraAndLogInitialize.Rd | 7
TDMR-0.1.3/TDMR/man/tdmGraphicCloseDev.Rd | 2
TDMR-0.1.3/TDMR/man/tdmGraphicCloseWin.Rd | 2
TDMR-0.1.3/TDMR/man/tdmGraphicInit.Rd | 4
TDMR-0.1.3/TDMR/man/tdmGraphicNewWin.Rd | 5
TDMR-0.1.3/TDMR/man/tdmMapDesApply.Rd | 10
TDMR-0.1.3/TDMR/man/tdmMapDesLoad.Rd | 7
TDMR-0.1.3/TDMR/man/tdmModConfmat.Rd | 4
TDMR-0.1.3/TDMR/man/tdmModSortedRFimport.Rd | 15
TDMR-0.1.3/TDMR/man/tdmOptsDefaultsFill.Rd | 21
TDMR-0.1.3/TDMR/man/tdmOptsDefaultsSet.Rd | 92 ++
TDMR-0.1.3/TDMR/man/tdmParaBootstrap.Rd | 6
TDMR-0.1.3/TDMR/man/tdmRandomSeed.Rd | 9
TDMR-0.1.3/TDMR/man/tdmReadData.Rd |only
TDMR-0.1.3/TDMR/man/tdmRegress.Rd | 10
TDMR-0.1.3/TDMR/man/tdmRegressLoop.Rd | 4
TDMR-0.1.3/TDMR/man/tdmRegressSummary.Rd | 2
TDMR-0.1.3/TDMR/man/tdmStartSpot.Rd | 17
TDMR-0.1.3/TDMR/man/unbiasedBestRun-sub-O.Rd |only
TDMR-0.1.3/TDMR/man/unbiasedRun.Rd |only
96 files changed, 1199 insertions(+), 913 deletions(-)
Title: Survey Sampling Procedures
Diff between samplingbook versions 1.0-2 dated 2010-09-19 and 1.1-0 dated 2012-01-04
Description: Sampling procedures from the book 'Stichproben. Methoden und praktische Umsetzung mit R' by Goeran Kauermann and Helmut Kuechenhoff (2010)
Author: Juliane Manitz
Maintainer: Juliane Manitz
DESCRIPTION | 29 +--
INDEX | 30 ++--
MD5 |only
NAMESPACE | 4
R/Smean.R | 91 ++++++------
R/Sprop.R | 193 ++++++++++++-------------
R/htestimate.R | 135 +++++++++---------
R/mbes.R | 327 ++++++++++++++++++++++----------------------
R/pps.sampling.R | 129 ++++++++---------
R/print.Smean.R | 23 +--
R/print.Sprop.R | 53 +++----
R/print.htestimate.R | 23 +--
R/print.mbes.R | 83 +++++------
R/print.pps.sampling.R | 35 ++--
R/print.sample.size.mean.R | 19 +-
R/print.sample.size.prop.R | 19 +-
R/print.stratamean.R |only
R/sample.size.mean.R | 67 ++++-----
R/sample.size.prop.R | 73 ++++-----
R/stratamean.R |only
R/stratasamp.R |only
data/election.rda |binary
data/influenza.rda |binary
data/money.rda |binary
data/pop.rda |binary
data/tax.rda |only
man/sample.size.prop.Rd | 2
man/samplingbook-package.Rd | 11 +
man/stratamean.Rd |only
man/stratasamp.Rd |only
man/tax.Rd |only
31 files changed, 673 insertions(+), 673 deletions(-)
Title: Ordinal Dominance Statistics
Diff between orddom versions 1.0 dated 2011-01-03 and 1.5 dated 2012-01-04
Description: Computes ordinal alternatives to mean comparison (Cliff's Delta)
Author: Jens J. Rogmann, University of Hamburg, Department of Psychology, Germany
Maintainer: Jens J. Rogmann
DESCRIPTION | 16 +--
MD5 |only
NAMESPACE |only
R/orddom.R | 171 ++++++++++++++++++++++++------------
man/orddom-package.Rd | 32 ++++--
man/orddom.Rd | 237 +++++++++++++++++++++++++++++++-------------------
6 files changed, 293 insertions(+), 163 deletions(-)
Title: Moment and Inverse Moment Bayes factors
Diff between mombf versions 1.3.3 dated 2011-11-25 and 1.3.4 dated 2012-01-04
Description: This package performs model selection based on non-local priors, including MOM, eMOM and iMOM priors. Routines are provided to compute Bayes factors, marginal densities and to perform variable selection in regression setups. Routines to evaluate prior densities, distribution functions, quantiles and modes are included.
Author: David Rossell, John D. Cook, Donatello Telesca, P. Roebuck
Maintainer: David Rossell
mombf-1.3.3/mombf/data/hald.R |only
mombf-1.3.4/mombf/DESCRIPTION | 27 -
mombf-1.3.4/mombf/MD5 | 91 ++---
mombf-1.3.4/mombf/NAMESPACE | 43 ++
mombf-1.3.4/mombf/R/AllClasses.R | 41 --
mombf-1.3.4/mombf/R/AllGenerics.R |only
mombf-1.3.4/mombf/R/dimom.R | 5
mombf-1.3.4/mombf/R/dmom.R | 8
mombf-1.3.4/mombf/R/emom.R | 6
mombf-1.3.4/mombf/R/emomLM.R | 4
mombf-1.3.4/mombf/R/g2mode.R | 29 +
mombf-1.3.4/mombf/R/greedyGLM.R | 7
mombf-1.3.4/mombf/R/imombf.R | 17
mombf-1.3.4/mombf/R/imombf.lm.R | 5
mombf-1.3.4/mombf/R/imomknown.R | 5
mombf-1.3.4/mombf/R/imomunknown.R | 5
mombf-1.3.4/mombf/R/margpimom.R | 4
mombf-1.3.4/mombf/R/margpmom.R | 4
mombf-1.3.4/mombf/R/mode2g.R | 33 +
mombf-1.3.4/mombf/R/modelSelection.R | 3
mombf-1.3.4/mombf/R/mombf.R | 5
mombf-1.3.4/mombf/R/mombf.lm.R | 5
mombf-1.3.4/mombf/R/momknown.R | 5
mombf-1.3.4/mombf/R/momunknown.R | 5
mombf-1.3.4/mombf/R/msPriorSpec.R |only
mombf-1.3.4/mombf/R/pimom.R | 5
mombf-1.3.4/mombf/R/pmom.R | 5
mombf-1.3.4/mombf/R/pmomLM.R | 5
mombf-1.3.4/mombf/R/pmomPM.R | 5
mombf-1.3.4/mombf/R/postMode.R | 67 ++-
mombf-1.3.4/mombf/R/pplProbit.R | 207 +++++++----
mombf-1.3.4/mombf/R/ppmodel.R | 5
mombf-1.3.4/mombf/R/priorp2g.R | 44 +-
mombf-1.3.4/mombf/R/qimom.R | 13
mombf-1.3.4/mombf/R/qmom.R | 19 -
mombf-1.3.4/mombf/R/zbfknown.R | 37 +-
mombf-1.3.4/mombf/R/zbfunknown.R | 33 +
mombf-1.3.4/mombf/R/zellnerbf.R | 9
mombf-1.3.4/mombf/R/zellnerbf.knownsig.R | 40 +-
mombf-1.3.4/mombf/R/zellnerbf.lm.R | 37 +-
mombf-1.3.4/mombf/R/zellnerbf.unknownsig.R | 38 +-
mombf-1.3.4/mombf/changeLog | 3
mombf-1.3.4/mombf/data/hald.rda |only
mombf-1.3.4/mombf/inst/doc/mombf.Rnw | 48 ++
mombf-1.3.4/mombf/inst/doc/mombf.pdf |binary
mombf-1.3.4/mombf/man/mode2g.Rd | 80 ++--
mombf-1.3.4/mombf/src/Makevars |only
mombf-1.3.4/mombf/src/cstat.c | 512 +++++++++++++++++------------
mombf-1.3.4/mombf/src/modelSel.c | 3
49 files changed, 1050 insertions(+), 522 deletions(-)
Title: Cyclone identification
Diff between cyclones versions 1.2-10 dated 2011-02-17 and 1.2-13 dated 2012-01-04
Description: Functions for locating local minima/maxima
Author: Rasmus E. Benestad
Maintainer: Rasmus E. Benestad
cyclones-1.2-10/cyclones/data/Storms.ERA40.R |only
cyclones-1.2-10/cyclones/data/Storms.ERA40.Rdata |only
cyclones-1.2-10/cyclones/data/Storms.ERA40X4.Rdata |only
cyclones-1.2-10/cyclones/data/Storms.ERA40x1.R |only
cyclones-1.2-10/cyclones/data/Storms.NMC.R |only
cyclones-1.2-10/cyclones/data/Storms.NMC.Rdata |only
cyclones-1.2-10/cyclones/data/etopo60.R |only
cyclones-1.2-10/cyclones/data/etopo60.Rdata |only
cyclones-1.2-13/cyclones/DESCRIPTION | 12 ++++++------
cyclones-1.2-13/cyclones/MD5 |only
cyclones-1.2-13/cyclones/R/CCI.R | 4 ++--
cyclones-1.2-13/cyclones/R/dx.R | 3 ++-
cyclones-1.2-13/cyclones/R/scl.R |only
cyclones-1.2-13/cyclones/R/test.dx.R | 6 +++---
cyclones-1.2-13/cyclones/data/Storms.ERA40.rda |only
cyclones-1.2-13/cyclones/data/Storms.NMC.rda |only
cyclones-1.2-13/cyclones/data/etopo60.rda |only
cyclones-1.2-13/cyclones/data/gcr.rda |only
cyclones-1.2-13/cyclones/data/gulfstream.rda |binary
cyclones-1.2-13/cyclones/data/kuroshio.rda |binary
cyclones-1.2-13/cyclones/man/scl.Rd |only
cyclones-1.2-13/cyclones/man/storms.Rd | 2 --
22 files changed, 13 insertions(+), 14 deletions(-)
Title: A graphical user interface for exploratory visualisation
Diff between latticist versions 0.9-43 dated 2010-06-30 and 0.9-44 dated 2012-01-04
Description: Latticist provides a graphical user interface for exploratory
visualisation. It is primarily an interface to the Lattice graphics
system, but also produces displays from the vcd package for categorical
data. Given a multivariate dataset (either a data frame or a table),
latticist attempts to produce useful displays based on the properties
of the data. The displays can be customised by editing the calls used to
generate them.
Author: Felix Andrews
Maintainer: Felix Andrews
latticist-0.9-43/latticist/inst/doc/figs |only
latticist-0.9-44/latticist/DESCRIPTION | 28 ++++++------
latticist-0.9-44/latticist/MD5 |only
latticist-0.9-44/latticist/NAMESPACE | 2
latticist-0.9-44/latticist/inst/NEWS | 4 +
latticist-0.9-44/latticist/inst/doc/latticistAids2.Rnw | 3 -
latticist-0.9-44/latticist/inst/doc/latticistAids2.pdf |binary
latticist-0.9-44/latticist/inst/doc/latticistCO2.Rnw | 3 -
latticist-0.9-44/latticist/inst/doc/latticistCO2.pdf |binary
latticist-0.9-44/latticist/inst/doc/latticistEmployment.Rnw | 3 -
latticist-0.9-44/latticist/inst/doc/latticistEmployment.pdf |binary
latticist-0.9-44/latticist/inst/doc/latticistFrogs.Rnw | 3 -
latticist-0.9-44/latticist/inst/doc/latticistFrogs.pdf |binary
13 files changed, 27 insertions(+), 19 deletions(-)
Title: Cryptographic Boolean Functions
Diff between boolfun versions 0.2.6 dated 2010-01-21 and 0.2.7 dated 2012-01-04
Description: This package can be used to assess cryptographic
properties of Boolean functions such as nonlinearity, algebraic
immunity, resiliency, etc... It also implements functionality
to handle Boolean polynomials, namely multiplication and
addition of multivariate polynomials with coefficients and
exponents in {0,1}.
Author: F.Lafitte
Maintainer: Frederic Lafitte
boolfun-0.2.6/boolfun/inst/doc/Rplots.pdf |only
boolfun-0.2.7/boolfun/CHANGES | 7 ++++++-
boolfun-0.2.7/boolfun/DESCRIPTION | 10 +++++-----
boolfun-0.2.7/boolfun/MD5 |only
boolfun-0.2.7/boolfun/NAMESPACE |only
boolfun-0.2.7/boolfun/inst/doc/boolfun.pdf |binary
boolfun-0.2.7/boolfun/inst/doc/pkg-doc.pdf |binary
boolfun-0.2.7/boolfun/inst/doc/polynomial.pdf |binary
boolfun-0.2.7/boolfun/man/Assignment.Rd | 4 ++--
boolfun-0.2.7/boolfun/man/BooleanFunction.Rd | 4 ++--
boolfun-0.2.7/boolfun/man/Polynomial.Rd | 4 ++--
11 files changed, 17 insertions(+), 12 deletions(-)
Title: SOM networks for comparing patterns with peak shifts
Diff between wccsom versions 1.2.4 dated 2011-02-26 and 1.2.5 dated 2012-01-04
Description: SOM networks for comparing patterns with peak shifts.
Author: Ron Wehrens
Maintainer: Ron Wehrens
DESCRIPTION | 8 ++++----
MD5 |only
NAMESPACE |only
3 files changed, 4 insertions(+), 4 deletions(-)
Title: A collection of handy, useful functions
Diff between useful versions 1.1.1 dated 2011-11-19 and 1.1.2 dated 2012-01-04
Description: A set of little functions that have been found
useful to do little odds and ends
Author: Jared P. Lander
Maintainer:
DESCRIPTION | 6 ++---
MD5 | 8 +++----
R/hartigan.r | 57 +++++++++++++++++++++++++++++++++++++++++++------------
README | 3 ++
man/FitKMeans.Rd | 4 +--
5 files changed, 57 insertions(+), 21 deletions(-)
Title: Sparse Partial Least Squares (SPLS) Regression and
Classification
Diff between spls versions 2.1-0 dated 2009-11-09 and 2.1-1 dated 2012-01-04
Description: This package provides functions for fitting a Sparse
Partial Least Squares Regression and Classification
Author: Dongjun Chung
Maintainer: Dongjun Chung
spls-2.1-0/spls/data/filelist |only
spls-2.1-1/spls/DESCRIPTION | 11 +-
spls-2.1-1/spls/MD5 |only
spls-2.1-1/spls/NAMESPACE |only
spls-2.1-1/spls/R/coefplot.spls.R | 4 -
spls-2.1-1/spls/R/cv.sgpls.R | 6 -
spls-2.1-1/spls/R/cv.sgpls.binary.R | 110 ++++++++++++++++-------------
spls-2.1-1/spls/R/cv.sgpls.multi.R | 110 ++++++++++++++++-------------
spls-2.1-1/spls/R/cv.splsda.R | 112 ++++++++++++++++--------------
spls-2.1-1/spls/data/datalist |only
spls-2.1-1/spls/data/lymphoma.RData |binary
spls-2.1-1/spls/data/mice.RData |binary
spls-2.1-1/spls/data/prostate.RData |binary
spls-2.1-1/spls/data/yeast.RData |binary
spls-2.1-1/spls/inst/doc/spls-example.pdf |binary
spls-2.1-1/spls/man/cv.sgpls.Rd | 9 ++
spls-2.1-1/spls/man/cv.splsda.Rd | 9 ++
spls-2.1-1/spls/man/spls-internal.Rd | 4 -
18 files changed, 210 insertions(+), 165 deletions(-)
Title: Statistical shape analysis
Diff between shapes versions 1.1-4 dated 2011-12-15 and 1.1-5 dated 2012-01-04
Description: Routines for the statistical analysis
of shapes. In particular, the package provides routines for
procrustes analysis, displaying shapes and principal components,
testing for mean shape difference, thin-plate spline transformation
grids and edge superimposition methods.
Author: Ian Dryden
Maintainer: Ian Dryden
shapes-1.1-4/shapes/man/distcov.Rd |only
shapes-1.1-4/shapes/man/estcov.Rd |only
shapes-1.1-5/shapes/DESCRIPTION | 8 ++++----
shapes-1.1-5/shapes/INDEX | 3 ---
shapes-1.1-5/shapes/MD5 | 10 ++++------
shapes-1.1-5/shapes/R/shapes.R | 22 +++++++++++-----------
shapes-1.1-5/shapes/man/shapes-internal.Rd | 2 ++
7 files changed, 21 insertions(+), 24 deletions(-)
Title: Sampling Surface Simulation for Areal Sampling Methods
Diff between sampSurf versions 0.5-6 dated 2011-08-09 and 0.6-0 dated 2012-01-04
Description: This package provides the base classes and routines for sampling surface simulation
useful in the comparison of different areal sampling methods in forestry, ecology
and natural resources.
Author: Jeffrey H. Gove
Maintainer: Jeffrey H. Gove
sampSurf-0.5-6/sampSurf/R/downLogIZs.R |only
sampSurf-0.6-0/sampSurf/DESCRIPTION | 49 -
sampSurf-0.6-0/sampSurf/MD5 | 154 ++--
sampSurf-0.6-0/sampSurf/NAMESPACE | 43 -
sampSurf-0.6-0/sampSurf/R/ArealSamplingClass.R | 38 +
sampSurf-0.6-0/sampSurf/R/ArealSamplingConstructors.R | 54 +
sampSurf-0.6-0/sampSurf/R/InclusionZoneClass.R | 118 +++
sampSurf-0.6-0/sampSurf/R/InclusionZoneConstructors.R | 269 ++++++-
sampSurf-0.6-0/sampSurf/R/InclusionZoneGridConstructors.R | 97 ++
sampSurf-0.6-0/sampSurf/R/StemClass.R | 196 ++++-
sampSurf-0.6-0/sampSurf/R/StemContainerClass.R |only
sampSurf-0.6-0/sampSurf/R/area.R | 25
sampSurf-0.6-0/sampSurf/R/bbox.R | 36
sampSurf-0.6-0/sampSurf/R/defStemEnv.R | 45 -
sampSurf-0.6-0/sampSurf/R/downLogs.R | 6
sampSurf-0.6-0/sampSurf/R/hist.R | 51 +
sampSurf-0.6-0/sampSurf/R/izContainer.R | 24
sampSurf-0.6-0/sampSurf/R/izContainerConstructors.R |only
sampSurf-0.6-0/sampSurf/R/perimeter.R | 53 +
sampSurf-0.6-0/sampSurf/R/plotInclusionZone.R | 70 +
sampSurf-0.6-0/sampSurf/R/plotStem.R | 62 -
sampSurf-0.6-0/sampSurf/R/plotStemContainer.R |only
sampSurf-0.6-0/sampSurf/R/plotizContainer.R |only
sampSurf-0.6-0/sampSurf/R/sampSurfConstructors.R | 145 ++-
sampSurf-0.6-0/sampSurf/R/sampleLogs.R | 1
sampSurf-0.6-0/sampSurf/R/sampleTrees.R |only
sampSurf-0.6-0/sampSurf/R/setAsStem.R | 40 -
sampSurf-0.6-0/sampSurf/R/setAsizContainer.R |only
sampSurf-0.6-0/sampSurf/R/showInclusionZone.R | 12
sampSurf-0.6-0/sampSurf/R/showStem.R | 10
sampSurf-0.6-0/sampSurf/R/spCircle.R |only
sampSurf-0.6-0/sampSurf/R/standingTree.R |only
sampSurf-0.6-0/sampSurf/R/standingTrees.R |only
sampSurf-0.6-0/sampSurf/R/summaryArealSampling.R | 44 +
sampSurf-0.6-0/sampSurf/R/summaryInclusionZone.R | 121 +++
sampSurf-0.6-0/sampSurf/R/summarySampSurf.R | 105 +-
sampSurf-0.6-0/sampSurf/R/summaryStem.R | 115 +--
sampSurf-0.6-0/sampSurf/R/summaryStemContainer.R |only
sampSurf-0.6-0/sampSurf/R/zzz.R | 25
sampSurf-0.6-0/sampSurf/inst/doc/ArealSamplingClass.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/GettingStarted.Rnw | 8
sampSurf-0.6-0/sampSurf/inst/doc/GettingStarted.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/InclusionZoneClass.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/InclusionZoneGridClass.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/Overview.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/StemClass.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/TractClass.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/sampSurfClass.pdf |binary
sampSurf-0.6-0/sampSurf/inst/doc/sampSurfExtensions.pdf |binary
sampSurf-0.6-0/sampSurf/man/ArealSampling-class.Rd | 4
sampSurf-0.6-0/sampSurf/man/InclusionZone-class.Rd | 7
sampSurf-0.6-0/sampSurf/man/Stem-class.Rd | 21
sampSurf-0.6-0/sampSurf/man/StemContainer-class.Rd |only
sampSurf-0.6-0/sampSurf/man/angleGauge-class.Rd |only
sampSurf-0.6-0/sampSurf/man/angleGauge-methods.Rd |only
sampSurf-0.6-0/sampSurf/man/angleGauge.Rd |only
sampSurf-0.6-0/sampSurf/man/circularPlotIZ-class.Rd |only
sampSurf-0.6-0/sampSurf/man/circularPlotIZ-methods.Rd |only
sampSurf-0.6-0/sampSurf/man/circularPlotIZ.Rd |only
sampSurf-0.6-0/sampSurf/man/downLog-class.Rd | 43 -
sampSurf-0.6-0/sampSurf/man/downLog-methods.Rd | 11
sampSurf-0.6-0/sampSurf/man/downLog.Rd | 16
sampSurf-0.6-0/sampSurf/man/downLogIZ-class.Rd | 22
sampSurf-0.6-0/sampSurf/man/downLogIZs-class.Rd | 26
sampSurf-0.6-0/sampSurf/man/downLogIZs.Rd | 4
sampSurf-0.6-0/sampSurf/man/downLogs-class.Rd | 85 --
sampSurf-0.6-0/sampSurf/man/downLogs-methods.Rd | 40 -
sampSurf-0.6-0/sampSurf/man/downLogs.Rd | 23
sampSurf-0.6-0/sampSurf/man/hist-methods.Rd | 30
sampSurf-0.6-0/sampSurf/man/horizontalPointIZ-class.Rd |only
sampSurf-0.6-0/sampSurf/man/horizontalPointIZ-methods.Rd |only
sampSurf-0.6-0/sampSurf/man/horizontalPointIZ.Rd |only
sampSurf-0.6-0/sampSurf/man/izContainer-class.Rd | 31
sampSurf-0.6-0/sampSurf/man/izContainer.Rd |only
sampSurf-0.6-0/sampSurf/man/izGrid-methods.Rd | 26
sampSurf-0.6-0/sampSurf/man/perimeter-methods.Rd | 37
sampSurf-0.6-0/sampSurf/man/plot-methods.Rd | 198 ++++-
sampSurf-0.6-0/sampSurf/man/pointRelascope-class.Rd | 5
sampSurf-0.6-0/sampSurf/man/sampSurf-methods.Rd | 14
sampSurf-0.6-0/sampSurf/man/sampSurf-package.Rd | 445 ++++++++----
sampSurf-0.6-0/sampSurf/man/sampleLogs.Rd | 3
sampSurf-0.6-0/sampSurf/man/sampleTrees.Rd |only
sampSurf-0.6-0/sampSurf/man/spCircle.Rd |only
sampSurf-0.6-0/sampSurf/man/standUpIZ-class.Rd | 9
sampSurf-0.6-0/sampSurf/man/standUpIZ.Rd | 6
sampSurf-0.6-0/sampSurf/man/standingTree-class.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTree-methods.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTree.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTreeIZ-class.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTreeIZs-class.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTreeIZs-methods.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTreeIZs.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTrees-class.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTrees-methods.Rd |only
sampSurf-0.6-0/sampSurf/man/standingTrees.Rd |only
95 files changed, 2331 insertions(+), 791 deletions(-)
Title: Ridge regression and other kernels for genomic selection
Diff between rrBLUP versions 2.8 dated 2011-12-17 and 3.0 dated 2012-01-04
Description: One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on kinship. The genetic covariance between lines can be modeled using a marker-based, additive relationship matrix, or via Gaussian and exponential kernels.
Author: Jeffrey Endelman
Maintainer: Jeffrey Endelman
DESCRIPTION | 6 +-
MD5 | 12 ++---
NEWS | 4 +
R/A.mat.R | 117 +++++++++++++++-------------------------------------
R/kinship.BLUP.R | 2
man/A.mat.Rd | 28 +++---------
man/kinship.BLUP.Rd | 2
7 files changed, 57 insertions(+), 114 deletions(-)
Title: Simulation-based Regularized Logistic Regression
Diff between reglogit versions 1.0 dated 2011-08-07 and 1.1 dated 2012-01-04
Description: Regularized logistic regression
by Gibbs sampling. The package implements subtly different
MCMC schemes with varying efficiency depending on the data type
(binary v. binomial, say) and the desired estimator (regularized maximum
likelihood, or Bayesian maximum a posteriori/posterior mean, etc.) through a
unified interface
Author: Robert B. Gramacy
Maintainer: Robert B. Gramacy
ChangeLog |only
DESCRIPTION | 22 +++++++++++-----------
MD5 | 17 ++++++++++++-----
NAMESPACE |only
R/dRUM.R |only
R/reglogit.R | 22 +++++++++++++---------
demo |only
man/reglogit-internal.Rd | 3 +++
man/reglogit.Rd | 12 ++++++++----
src/Makevars |only
src/gibbs.c | 4 ++--
11 files changed, 49 insertions(+), 31 deletions(-)
Title: R Client for Mobilize/Andwellness server
Diff between Ohmage versions 2.9-1 dated 2012-01-03 and 2.9-2 dated 2012-01-04
Description: R Client for Mobilize and Andwellness server. Implements basic R
functions to call and process data.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms
Ohmage-2.9-1/Ohmage/R/onAttach.R |only
Ohmage-2.9-2/Ohmage/.project |only
Ohmage-2.9-2/Ohmage/DESCRIPTION | 20 +++++++++++---------
Ohmage-2.9-2/Ohmage/MD5 | 12 ++++++------
Ohmage-2.9-2/Ohmage/NAMESPACE | 6 ++++++
Ohmage-2.9-2/Ohmage/R/loadtest.R | 3 +++
Ohmage-2.9-2/Ohmage/R/oh.call.R | 1 +
Ohmage-2.9-2/Ohmage/R/oh.login.R | 10 +++++++++-
Ohmage-2.9-2/Ohmage/R/onLoad.R |only
9 files changed, 36 insertions(+), 16 deletions(-)
Title: R port of the Scilab neldermead module
Diff between neldermead versions 1.0-6 dated 2011-03-31 and 1.0-7 dated 2012-01-04
Description: Provides several direct search optimization algorithms based on the
simplex method. The provided algorithms are direct search algorithms, i.e.
algorithms which do not use the derivative of the cost function. They are
based on the update of a simplex. The following algorithms are available: the
fixed shape simplex method of Spendley, Hext and Himsworth (unconstrained
optimization with a fixed shape simplex), the variable shape simplex method of
Nelder and Mead (unconstrained optimization with a variable shape simplex
made), and Box's complex method (constrained optimization with a variable
shape simplex).
Author: Sebastien Bihorel, Michael Baudin (author of the original
module)
Maintainer: Sebastien Bihorel
neldermead-1.0-6/neldermead/.project |only
neldermead-1.0-6/neldermead/inst/doc/fminsearch.png |only
neldermead-1.0-6/neldermead/inst/doc/neldermeadalgo1.png |only
neldermead-1.0-6/neldermead/inst/doc/neldermeadalgo2.png |only
neldermead-1.0-6/neldermead/inst/doc/neldermeadalgo3.png |only
neldermead-1.0-6/neldermead/inst/doc/neldermeadsearch1.png |only
neldermead-1.0-6/neldermead/inst/doc/neldermeadsearch2.png |only
neldermead-1.0-7/neldermead/Changelog | 4 +
neldermead-1.0-7/neldermead/DESCRIPTION | 28 +++++-------
neldermead-1.0-7/neldermead/MD5 |only
neldermead-1.0-7/neldermead/inst/doc/fminsearch.pdf |only
neldermead-1.0-7/neldermead/inst/doc/neldermead-package.tex | 4 -
neldermead-1.0-7/neldermead/inst/doc/neldermead.Rnw | 15 +++---
neldermead-1.0-7/neldermead/inst/doc/neldermead.pdf |binary
neldermead-1.0-7/neldermead/inst/doc/neldermeadalgo1.pdf |only
neldermead-1.0-7/neldermead/inst/doc/neldermeadalgo2.pdf |only
neldermead-1.0-7/neldermead/inst/doc/neldermeadalgo3.pdf |only
neldermead-1.0-7/neldermead/inst/doc/neldermeadsearch1.pdf |only
neldermead-1.0-7/neldermead/inst/doc/neldermeadsearch2.pdf |only
neldermead-1.0-7/neldermead/man/neldermead-package.Rd | 4 -
20 files changed, 28 insertions(+), 27 deletions(-)
Title: Matrix Computation Based Identification Of Prime Implicants
Diff between mcbiopi versions 1.1.1 dated 2012-01-03 and 1.1.2 dated 2012-01-04
Description: Computes the prime implicants or a minimal disjunctive normal form for a
logic expression presented by a truth table or a logic tree. Has been particularly
developed for logic expressions resulting from a logic regression analysis, i.e.
logic expressions typically consisting of up to 16 literals, where the prime implicants
are typically composed of a maximum of 4 or 5 literals.
Author: Holger Schwender
Maintainer: Holger Schwender
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
NAMESPACE | 2 +-
man/generateTruthTab.Rd | 1 +
4 files changed, 9 insertions(+), 8 deletions(-)
Title: Supervised and unsupervised self-organising maps
Diff between kohonen versions 2.0.7 dated 2011-03-28 and 2.0.8 dated 2012-01-04
Description: Supervised and unsupervised self-organising maps
Author: Ron Wehrens
Maintainer: Ron Wehrens
CHANGES | 6 ++++++
DESCRIPTION | 8 ++++----
MD5 |only
NAMESPACE |only
inst/doc/kohonen-manual.pdf |binary
5 files changed, 10 insertions(+), 4 deletions(-)
Title: Economic Design of Control Charts
Diff between edcc versions 0.1-0 dated 2011-11-14 and 0.2-0 dated 2012-01-04
Description: This package provide a unified approach for
Economic Design of Control Charts. The main purpose of
this package is to find out the optimal parameters to
minimize the cost per unit time.
Author: Weicheng Zhu, Changsoon Park
Maintainer: Weicheng Zhu
edcc-0.1-0/edcc/man/summary.edcc.Rd |only
edcc-0.2-0/edcc/DESCRIPTION | 6
edcc-0.2-0/edcc/MD5 | 18
edcc-0.2-0/edcc/NAMESPACE | 5
edcc-0.2-0/edcc/R/ecoDesign.R | 818 ++++++++++++++++++++++++++----------
edcc-0.2-0/edcc/R/internal.R | 164 +++----
edcc-0.2-0/edcc/man/contour.edcc.Rd | 14
edcc-0.2-0/edcc/man/ecoCusum.Rd | 100 +++-
edcc-0.2-0/edcc/man/ecoEwma.Rd | 82 ++-
edcc-0.2-0/edcc/man/ecoXbar.Rd | 97 +++-
edcc-0.2-0/edcc/man/update.edcc.Rd |only
11 files changed, 910 insertions(+), 394 deletions(-)
Title: Plots Coefficients from Fitted Models
Diff between coefplot versions 1.1.3 dated 2011-12-24 and 1.1.4 dated 2012-01-04
Description: Plots the coefficients from a model object
Author: Jared P. Lander
Maintainer:
DESCRIPTION | 6 +++---
MD5 | 14 ++++++++------
NAMESPACE | 3 +++
R/coefplot.r | 25 +++++++++++++++++++++++++
R/modelInfo.r | 39 +++++++++++++++++++++++++++++++++++++--
README | 2 ++
man/coefplot.rxLogit.Rd |only
man/getModelInfo.rxLinMod.Rd | 3 ++-
man/getModelInfo.rxLogit.Rd |only
9 files changed, 80 insertions(+), 12 deletions(-)
Title: Data for package ChemometricsWithR
Diff between ChemometricsWithRData versions 0.1.1 dated 2011-02-17 and 0.1.2 dated 2012-01-04
More information about ChemometricsWithRData at CRAN
Description: The package provides data sets used in the book "Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences" by Ron Wehrens, Springer (2011).
Author: Ron Wehrens
Maintainer: Ron Wehrens
DESCRIPTION | 15 ++++++---------
MD5 |only
NAMESPACE |only
data/datalist |only
data/prostate.rda |binary
man/prostate.Rd | 6 +++---
6 files changed, 9 insertions(+), 12 deletions(-)
Permanent link
Title: Chemometrics with R - Multivariate Data Analysis in the Natural
Sciences and Life Sciences
Diff between ChemometricsWithR versions 0.1.3 dated 2011-02-17 and 0.1.5 dated 2012-01-04
More information about ChemometricsWithR at CRAN
Description: The package provides functions and scripts used in the book "Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences" by Ron Wehrens, Springer (2011).
Author: Ron Wehrens
Maintainer: Ron Wehrens
DESCRIPTION | 15 ++++++---------
MD5 |only
NAMESPACE |only
R/PCA.R | 2 +-
4 files changed, 7 insertions(+), 10 deletions(-)
Permanent link
Title: Classification and Regression Training
Diff between caret versions 5.09-012 dated 2011-12-11 and 5.10-13 dated 2012-01-04
Description: Misc functions for training and plotting classification and regression models
Author: Max Kuhn. Contributions from Jed Wing, Steve Weston, Andre Williams, Chris Keefer and Allan Engelhardt
Maintainer: Max Kuhn
DESCRIPTION | 13
MD5 | 55 +--
R/aucRoc.R | 2
R/createGrid.R | 2
R/createModel.R | 17 -
R/filterVarImp.R | 83 ++++-
R/misc.R | 33 +-
R/modelLookup.R | 53 ++-
R/predictionFunction.R | 22 +
R/roc.R | 2
R/rocPoint.R | 1
R/selection.R | 3
R/train.default.R | 1
inst/NEWS | 25 +
inst/doc/allPred.pdf |binary
inst/doc/caretMisc.pdf |binary
inst/doc/caretSelection.pdf |binary
inst/doc/caretTrain.Rnw | 724 ++++++--------------------------------------
inst/doc/caretTrain.pdf |binary
inst/doc/caretVarImp.pdf |binary
inst/doc/compact.Rout | 2
inst/doc/filteredPred.pdf |binary
inst/doc/min.pdf |binary
inst/doc/speedup.pdf |binary
inst/modelKey.txt |only
man/aucRoc.Rd | 6
man/createDataPartition.Rd | 2
man/roc.Rd | 7
man/train.Rd | 4
29 files changed, 380 insertions(+), 677 deletions(-)
Title: Bayesian sampler of the trait-evolutionary process
Diff between auteur versions 0.11.0612 dated 2011-07-23 and 0.12.0102 dated 2012-01-04
Description: Identifies shifts in process of continuous-trait evolution
on phylogenetic trees
Author: JM Eastman, ME Alfaro, AL Hipp, P Joyce, Matthew Pennell, and
LJ Harmon
Maintainer: Jonathan Eastman
ChangeLog | 4 ++++
DESCRIPTION | 8 ++++----
MD5 |only
R/auteur.utilities.R | 2 +-
R/rjmcmc.R | 2 +-
man/rjmcmc.bm.Rd | 2 +-
6 files changed, 11 insertions(+), 7 deletions(-)