Title: Robust Covariance Matrix Estimators
Diff between sandwich versions 2.2-8 dated 2011-09-28 and 2.2-9 dated 2012-01-14
Description: Model-robust standard error estimators for
cross-sectional, time series and longitudinal data.
Author: Thomas Lumley [aut], Achim Zeileis [aut, cre]
Maintainer: Achim Zeileis
DESCRIPTION | 8 ++++----
MD5 | 22 ++++++++++++----------
NAMESPACE | 1 +
NEWS | 14 ++++++++++++++
R/estfun.R | 5 ++++-
R/lrvar.R |only
R/vcovHAC.R | 13 ++++++++-----
R/vcovHC.R | 2 ++
data/Investment.rda |binary
data/PublicSchools.rda |binary
inst/doc/sandwich-OOP.pdf |binary
inst/doc/sandwich.pdf |binary
man/lrvar.Rd |only
13 files changed, 45 insertions(+), 20 deletions(-)
Title: Tools for parsing and generating XML within R and S-Plus.
Diff between XML versions 3.7-4 dated 2012-01-12 and 3.8-0 dated 2012-01-14
Description: This package provides many approaches for both reading and
creating XML (and HTML) documents (including DTDs), both local
and accessible via HTTP or FTP. It also offers access to an
XPath "interpreter".
Author: Duncan Temple Lang (duncan@wald.ucdavis.edu)
Maintainer: Duncan Temple Lang
Changes | 4 ++++
DESCRIPTION | 8 ++++----
INSTALL | 2 +-
MD5 | 12 ++++++++----
NAMESPACE.in | 2 ++
R/keyValueDB.R |only
R/solrDocs.R |only
man/readKeyValueDB.Rd |only
man/readSolrDoc.Rd |only
9 files changed, 19 insertions(+), 9 deletions(-)
Title: Semiparametric Bivariate Probit Modelling
Diff between SemiParBIVProbit versions 2.0-4.1 dated 2011-10-08 and 3.0 dated 2012-01-14
More information about SemiParBIVProbit at CRAN
Description: Routine for fitting bivariate probit models with
semiparametric predictors (including linear, nonlinear and
nonparametric random effects) in the presence of correlated
error equations, endogeneity or sample selection.
Author: Giampiero Marra
Maintainer: Giampiero Marra
ChangeLog | 4
DESCRIPTION | 22 ++--
MD5 | 58 ++++++-----
NAMESPACE |only
R/SemiParBIVProbit.r | 193 +++++++++++++++++++++++++++++--------
R/bprob.r | 24 ++--
R/bprobNP.H.r |only
R/bprobNP.r |only
R/bprobSS.r | 25 ++--
R/plot.SemiParBIVProbit.r | 32 ++----
R/print.SemiParBIVProbit.r | 5
R/print.summary.SemiParBIVProbit.r | 48 ++++-----
R/summary.SemiParBIVProbit.r | 180 ++++++++++++++++++++++++----------
R/working.comp.r | 4
R/zzz.r | 50 +++++----
inst |only
man/AT.Rd | 6 -
man/InfCr.Rd | 3
man/S.m.Rd | 3
man/SemiParBIVProbit-package.Rd | 13 +-
man/SemiParBIVProbit.Rd | 140 ++++++++++++++++++++++----
man/SemiParBIVProbitObject.Rd | 13 ++
man/bprob.Rd | 6 -
man/bprobNP.H.Rd |only
man/bprobNP.Rd |only
man/bprobSS.Rd | 4
man/plot.SemiParBIVProbit.Rd | 3
man/print.AT.Rd | 3
man/print.SemiParBIVProbit.Rd | 4
man/residuals.SemiParBIVProbit.Rd | 12 +-
man/spS.Rd | 3
man/summary.SemiParBIVProbit.Rd | 35 ++++--
man/working.comp.Rd | 5
33 files changed, 608 insertions(+), 290 deletions(-)
Permanent link
Title: Multivariate Process Capability Indices (MPCI)
Diff between MPCI versions 1.0.1 dated 2011-10-06 and 1.0.2 dated 2012-01-14
Description: MPCI package performs the followings Multivariate Process
Capability Indices: Shahriari et al. (1995) Multivariate
Capability Vector, Taam et al. (1993) Multivariate Capability
Index (MCpm) and the followings based on Principal Component
Analysis (PCA):Wang and Chen (1998), Xekalaki and Perakis
(2002) and Wang (2005). Moreover, include two datasets.
Author: Edgar Santos Fernandez, Michele Scagliarini.
Maintainer: Edgar Santos Fernandez
MPCI-1.0.1/MPCI/R/shahMPCI.R |only
MPCI-1.0.1/MPCI/R/taamMPCI.R |only
MPCI-1.0.1/MPCI/R/wangMPCI.R |only
MPCI-1.0.1/MPCI/R/wangwMPCI.R |only
MPCI-1.0.1/MPCI/R/xekeMPCI.R |only
MPCI-1.0.1/MPCI/man/shahMPCI.Rd |only
MPCI-1.0.1/MPCI/man/taamMPCI.Rd |only
MPCI-1.0.1/MPCI/man/wangMPCI.Rd |only
MPCI-1.0.1/MPCI/man/wangwMPCI.Rd |only
MPCI-1.0.1/MPCI/man/xekeMPCI.Rd |only
MPCI-1.0.2/MPCI/DESCRIPTION | 11 ++++++-----
MPCI-1.0.2/MPCI/MD5 | 21 +++++++--------------
MPCI-1.0.2/MPCI/NAMESPACE |only
MPCI-1.0.2/MPCI/R/mpci.R |only
MPCI-1.0.2/MPCI/data/dataset1.rda |binary
MPCI-1.0.2/MPCI/data/dataset2.rda |binary
MPCI-1.0.2/MPCI/man/MPCI-package.Rd | 24 ++++++++++++------------
MPCI-1.0.2/MPCI/man/mpci.Rd |only
18 files changed, 25 insertions(+), 31 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-01-21 1.0
Title: Memory management in R by delayed assignments
Diff between SOAR versions 0.99-9 dated 2012-01-08 and 0.99-10 dated 2012-01-14
Description: Allows objects to be stored on disc and automatically
recalled as required into memory by delayed assignment.
Author: Bill Venables, based on original code by David Brahm
Maintainer: Bill Venables
SOAR-0.99-10/SOAR/DESCRIPTION | 8 +--
SOAR-0.99-10/SOAR/MD5 | 12 ++---
SOAR-0.99-10/SOAR/R/SOAR.R | 77 +++++++++++++++++-----------------
SOAR-0.99-10/SOAR/inst/NEWS | 4 +
SOAR-0.99-10/SOAR/inst/doc/Makefile | 2
SOAR-0.99-10/SOAR/inst/doc/SOAR.pdf |binary
SOAR-0.99-10/SOAR/man/SOAR-package.Rd | 4 -
SOAR-0.99-9/SOAR/inst/doc/.R_Store |only
8 files changed, 56 insertions(+), 51 deletions(-)
Title: R interface to the MySQL database
Diff between RMySQL versions 0.8-0 dated 2011-06-09 and 0.9-0 dated 2012-01-14
Description: Database interface and MySQL driver for R. This version
complies with the database interface definition as implemented
in the package DBI 0.2-2.
Author: David A. James and Saikat DebRoy
Maintainer: Jeffrey Horner
RMySQL-0.8-0/RMySQL/inst/INSTALL.win |only
RMySQL-0.9-0/RMySQL/DESCRIPTION | 13 +
RMySQL-0.9-0/RMySQL/MD5 |only
RMySQL-0.9-0/RMySQL/R/MySQL.R | 4
RMySQL-0.9-0/RMySQL/R/MySQLSupport.R | 2
RMySQL-0.9-0/RMySQL/R/S4R.R | 2
RMySQL-0.9-0/RMySQL/R/dbObjectId.R | 2
RMySQL-0.9-0/RMySQL/R/zzz.R | 129 ++++++++++++-------
RMySQL-0.9-0/RMySQL/configure.in | 2
RMySQL-0.9-0/RMySQL/inst/INSTALL | 44 ++++++
RMySQL-0.9-0/RMySQL/inst/doc/DBI.pdf |binary
RMySQL-0.9-0/RMySQL/man/MySQL.Rd | 2
RMySQL-0.9-0/RMySQL/man/MySQLConnection-class.Rd | 2
RMySQL-0.9-0/RMySQL/man/MySQLDriver-class.Rd | 2
RMySQL-0.9-0/RMySQL/man/MySQLObject-class.Rd | 2
RMySQL-0.9-0/RMySQL/man/MySQLResult-class.Rd | 2
RMySQL-0.9-0/RMySQL/man/S4R.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbApply-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbApply.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbCallProc-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbCommit-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbConnect-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbDataType-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbDriver-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbGetInfo-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbListTables-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbObjectId-class.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbReadTable-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbSendQuery-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/dbSetDataMappings-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/fetch-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/isIdCurrent.Rd | 2
RMySQL-0.9-0/RMySQL/man/make.db.names-methods.Rd | 2
RMySQL-0.9-0/RMySQL/man/mysqlDBApply.Rd | 2
RMySQL-0.9-0/RMySQL/man/mysqlSupport.Rd | 2
RMySQL-0.9-0/RMySQL/man/safe.write.Rd | 2
RMySQL-0.9-0/RMySQL/man/summary-methods.Rd | 2
RMySQL-0.9-0/RMySQL/src/RS-DBI.c | 2
RMySQL-0.9-0/RMySQL/src/RS-DBI.h | 2
RMySQL-0.9-0/RMySQL/src/RS-MySQL.c | 4
RMySQL-0.9-0/RMySQL/src/RS-MySQL.h | 2
RMySQL-0.9-0/RMySQL/src/S4R.h | 2
RMySQL-0.9-0/RMySQL/tests/tests.R | 35 +++--
RMySQL-0.9-0/RMySQL/tests/tests.Rout.save | 42 ++++--
44 files changed, 235 insertions(+), 104 deletions(-)
Title: RMAWGEN (R Multi-site Auto-regressive Weather GENeretor): a
package to generate daily time series from monthly mean values
Diff between RMAWGEN versions 1.2 dated 2011-12-22 and 1.2.1 dated 2012-01-14
Description: This package contains S3 and S4 functions for spatial
multi-site stochastic generation of daily timeseries of
temperature and precipitation. The implemented tools make use
of Vectorial AutoRegressive models (VARs). The VAR is
calibrated by daily instrumental "Gaussinized" time series and
then works with monthly timeseries as input.
Bugs/comments/questions/collaboration of any kind are warmly
welcomed.
Author: Emanuele Cordano, Emanuele Eccel
Maintainer: Emanuele Cordano
DESCRIPTION | 27 ++++++++++++++------------
LICENSE |only
MD5 | 26 +++++++++++++++----------
NAMESPACE | 2 +
R/ComprehensivePrecipitationGenerator.R | 14 +++++++------
R/RMAWGEN-package.R | 23 +++++++++++++++++++---
R/newVARmultieventRealization.R | 8 ++++---
R/normalizeGaussian_prec.R |only
R/normalizeGaussian_sevaralstations.R | 6 +++++
R/normalizeGaussian_sevaralstations_prec.R |only
R/setWholeTemperatureGeneratorParameters.R | 2 -
inst/doc/examples/precipitation-generator.R | 26 ++++++++++++++++++++-----
inst/doc/examples/weather-generator.R |only
man/ComprehensivePrecipitationGenerator.Rd | 14 ++++++-------
man/RMAWGEN-package.Rd | 25 +++++++++++++++++++++---
man/normalizeGaussian_prec.Rd |only
man/normalizeGaussian_severalstations_prec.Rd |only
17 files changed, 123 insertions(+), 50 deletions(-)
Title: R Client for Mobilize/Andwellness server
Diff between Ohmage versions 2.9-2 dated 2012-01-04 and 2.9-4 dated 2012-01-14
Description: R Client for Mobilize and Andwellness server. Implements
basic R functions to call and process data.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms
DESCRIPTION | 20 +++++---------------
MD5 | 18 ++++++++++++++----
R/benchmark.R |only
R/loadtest.R | 38 ++++++++++++++++++++++++--------------
debian |only
inst/files/jeroen-nophoto.xml |only
man/loadtest.Rd | 6 +++++-
man/loadtest.wipe.Rd | 5 ++++-
test |only
9 files changed, 52 insertions(+), 35 deletions(-)
Title: Multi-model inference
Diff between MuMIn versions 1.6.5 dated 2011-11-28 and 1.6.6 dated 2012-01-14
Description: Model selection and model averaging based on information
criteria (AICc and alike).
Author: Kamil Bartoń
Maintainer: Kamil Bartoń
MuMIn-1.6.5/MuMIn/R/dredge-old.R |only
MuMIn-1.6.6/MuMIn/DESCRIPTION | 14 ++--
MuMIn-1.6.6/MuMIn/MD5 | 19 ++---
MuMIn-1.6.6/MuMIn/NEWS | 4 +
MuMIn-1.6.6/MuMIn/R/dredge.R | 120 ++++++++++++++++++------------------
MuMIn-1.6.6/MuMIn/R/model.avg.R | 22 ++++--
MuMIn-1.6.6/MuMIn/R/pdredge.R | 12 ++-
MuMIn-1.6.6/MuMIn/data/Beetle.rda |binary
MuMIn-1.6.6/MuMIn/data/Cement.rda |binary
MuMIn-1.6.6/MuMIn/inst/TODO | 11 ++-
MuMIn-1.6.6/MuMIn/inst/doc/gamm.pdf |binary
11 files changed, 114 insertions(+), 88 deletions(-)
Title: Sparse and Dense Matrix Classes and Methods
Diff between Matrix versions 1.0-2 dated 2011-11-20 and 1.0-3 dated 2012-01-14
Description: Classes and methods for dense and sparse matrices and
operations on them using Lapack and SuiteSparse.
Author: Douglas Bates
Maintainer: Doug and Martin
ChangeLog | 11 ++++++-
DESCRIPTION | 15 +++++-----
MD5 | 56 +++++++++++++++++++-------------------
NAMESPACE | 9 ++++--
R/Auxiliaries.R | 4 +-
R/diagMatrix.R | 20 ++++++++-----
R/zzz.R | 16 ++++++----
inst/doc/Comparisons.pdf |binary
inst/doc/Design-issues.pdf |binary
inst/doc/Intro2Matrix.pdf |binary
inst/doc/Introduction.pdf |binary
inst/doc/sparseModels.Rnw | 2 -
inst/doc/sparseModels.pdf |binary
inst/include/Matrix_stubs.c | 6 ++++
inst/test-tools-1.R | 22 ++++++++++++++
man/bdiag.Rd | 7 ++++
src/AMD/Include/amd_internal.h | 2 +
src/AMD/Source/amd_global.c | 4 ++
src/CHOLMOD/Lib/Makefile | 2 +
src/COLAMD/Source/colamd_global.c | 3 ++
src/Mutils.c | 2 +
src/Mutils.h | 7 ++++
src/UFconfig/UFconfig.h | 5 +++
src/cs.h | 4 ++
src/dgeMatrix.c | 4 --
src/init.c | 2 +
src/scripts/CSparse_install.sh | 5 ++-
src/scripts/UFsparse_download.sh | 9 ++++--
tests/factorizing.R | 14 ++++-----
29 files changed, 155 insertions(+), 76 deletions(-)
Title: Harrell Miscellaneous
Diff between Hmisc versions 3.9-0 dated 2011-11-08 and 3.9-1 dated 2012-01-14
Description: The Hmisc library contains many functions useful for data
analysis, high-level graphics, utility operations, functions
for computing sample size and power, importing datasets,
imputing missing values, advanced table making, variable
clustering, character string manipulation, conversion of S
objects to LaTeX code, and recoding variables. Please submit
bug reports to 'http://biostat.mc.vanderbilt.edu/trac/Hmisc'.
Author: Frank E Harrell Jr
Maintainer: Charles Dupont
DESCRIPTION | 24
MD5 | 50 -
NAMESPACE | 4
R/describe.s | 6
man/Overview.Rd | 66 -
man/abs.error.pred.Rd | 82 +-
man/bootkm.Rd | 74 +-
man/data.frame.create.modify.check.Rd | 137 ++-
man/deff.Rd | 28
man/getHdata.Rd | 82 +-
man/prselect.Rd | 44 -
man/ps.slide.Rd | 496 +++++++-------
man/rcorr.cens.Rd | 2
man/rcorrp.cens.Rd | 136 ++-
man/rcspline.eval.Rd | 119 +--
man/rcspline.plot.Rd | 229 +++---
man/rcspline.restate.Rd | 58 -
man/rm.boot.Rd | 702 ++++++++++----------
man/samplesize.bin.Rd | 51 -
man/scat1d.Rd | 634 +++++++++---------
man/spower.Rd | 437 ++++++------
man/transace.Rd | 563 ++++++++--------
man/transcan.Rd | 1179 +++++++++++++++++-----------------
tests/aregImpute.r | 2
tests/aregImpute2.r | 2
tests/inverseFunction.r | 2
26 files changed, 2701 insertions(+), 2508 deletions(-)
Title: Power calculations for cluster-randomized and cluster-randomized
crossover trials
Diff between clusterPower versions 0.1 dated 2011-06-02 and 0.3 dated 2012-01-14
Description: This package enables researchers to calculate power for
cluster-randomized crossover trials by employing a
simulation-based approach. A particular study design is
specified, with fixed sample sizes for all clusters and an
assumed treatment effect, and the empirical power for that
study design is calculated by simulating hypothetical datasets.
Author: Nicholas G. Reich
Maintainer: Nicholas G. Reich
ChangeLog | 6 +++
DESCRIPTION | 9 +++--
MD5 |only
NAMESPACE |only
R/cannedEstimationFunctions.R | 64 ++++++++++++++++++++++++++++++++++--------
R/simulationEngines.R | 60 ++++++++++++++++++++++++++++++---------
man/fixed.effect.Rd | 10 +++---
man/power.sim.normal.Rd | 5 ++-
8 files changed, 120 insertions(+), 34 deletions(-)
Title: Implementation of the 3D alpha-shape for the reconstruction of
3D sets from a point cloud
Diff between alphashape3d versions 0.2 dated 2011-10-17 and 1.0 dated 2012-01-14
Description: The package alphashape3d presents the implementation in R
of the alpha-shape of a finite set of points in the
three-dimensional space. This geometric structure generalizes
the convex hull and allows to recover the shape of non-convex
and even non-connected sets in 3D, given a random sample of
points taken into it. Besides the computation of the
alpha-shape, the package alphashape3d provides users with
functions to compute the volume of the alpha-shape, identify
the connected components and facilitate the three-dimensional
graphical visualization of the estimated set.
Author: Thomas Lafarge, Beatriz Pateiro-Lopez
Maintainer: Thomas Lafarge
DESCRIPTION | 8
MD5 | 28 +-
NAMESPACE | 3
R/ashape3d.R | 597 +++++++++++++++++++++-----------------------
R/components_ashape3d.R | 13
R/inashape3d.R |only
R/rtorus.R | 16 -
R/surfaceNormals.R |only
R/volume_ashape3d.R | 4
man/alphashape3d-package.Rd | 4
man/ashape3d.Rd | 8
man/components_ashape3d.Rd | 6
man/inashape3d.Rd |only
man/plot.ashape3d.Rd | 4
man/rtorus.Rd | 10
man/surfaceNormals.Rd |only
src/insideashape.c |only
src/surfaceNormals.c |only
18 files changed, 355 insertions(+), 346 deletions(-)