Title: Ridge regression and other kernels for genomic selection
Diff between rrBLUP versions 3.1 dated 2012-01-04 and 3.2 dated 2012-01-24
Description: One application is to estimate marker effects by ridge
regression; alternatively, BLUPs can be calculated based on
kinship. The genetic covariance between lines can be modeled
using a marker-based, additive relationship matrix, or via
Gaussian and exponential kernels.
Author: Jeffrey Endelman
Maintainer: Jeffrey Endelman
DESCRIPTION | 15 +++++--
MD5 | 19 +++++----
NAMESPACE | 3 +
NEWS | 5 ++
R/A.mat.R | 91 +++++++++++++++++------------------------------
R/GWA.R | 96 +++++++++++++++++++++++++++++++-------------------
R/kinship.BLUP.R | 31 ++++++++++------
man/A.mat.Rd | 16 ++------
man/GWA.Rd | 15 +++----
man/kinship.BLUP.Rd | 7 ++-
man/rrBLUP-package.Rd |only
11 files changed, 157 insertions(+), 141 deletions(-)
Title: A Package for Running jags from R
Diff between R2jags versions 0.03-03 dated 2012-01-22 and 0.03-04 dated 2012-01-24
Description: Using this package to call jags from R.
Author: Yu-Sung Su
Maintainer: Yu-Sung Su
CHANGELOG | 9 +++++++
DESCRIPTION | 10 ++++----
MD5 | 20 ++++++++--------
NAMESPACE | 3 +-
R/AllClass.R | 13 +++++------
R/autojags.R | 2 -
R/jags.R | 65 +++++++++++++++++++++++++++++++++++++++++++++----------
R/jagsParallel.R | 23 +++++++++++--------
R/traceplot.R | 14 ++++++++++-
R/update.R | 13 ++++++++---
man/jags.Rd | 17 ++++++++------
11 files changed, 133 insertions(+), 56 deletions(-)
Title: Planning and Analyzing Dose Finding experiments
Diff between DoseFinding versions 0.5-6 dated 2011-10-20 and 0.5-7 dated 2012-01-24
Description: The DoseFinding package provides functions for the design
and analysis of dose-finding experiments (for example
pharmaceutical Phase II clinical trials). It provides functions
for: multiple contrast tests, fitting non-linear dose-response
models, calculating optimal designs and an implementation of
the MCPMod methodology.
Author: Bjoern Bornkamp, Jose Pinheiro, Frank Bretz
Maintainer: Bjoern Bornkamp
ChangeLog | 14 +++++
DESCRIPTION | 8 +--
MD5 | 56 +++++++++++------------
R/analysisMCPMod.R | 9 ++-
R/genFitCode.R | 107 +++++++++++++++++----------------------------
R/optDesign.R | 20 +++++---
R/planMCPMod.R | 25 +++++++---
ToDo | 2
man/DRMod-methods.Rd | 20 +++++---
man/DoseFinding-package.Rd | 6 +-
man/LP.Rd | 12 ++---
man/calcBayesEst.Rd | 8 +--
man/calcCrit.Rd | 10 +++-
man/calcOptDesign.Rd | 32 ++++++++-----
man/critVal.Rd | 8 +--
man/doseRespModels.Rd | 9 ++-
man/fitDRModel.Rd | 48 ++++++++++----------
man/fullMod.Rd | 3 -
man/gFitDRModel.Rd | 38 +++++++++------
man/getPars.Rd | 5 +-
man/guesst.Rd | 44 +++++++++---------
man/planMM.Rd | 13 ++---
man/plotModels.Rd | 13 ++---
man/powCalc.Rd | 14 ++---
man/powerMM.Rd | 19 ++++---
man/sampSize.Rd | 19 ++++---
src/optDes.c | 18 +++++--
tests/testsDesign.R | 39 ++++++++++++++++
tests/testsMCP.R | 27 +++++++++--
29 files changed, 379 insertions(+), 267 deletions(-)
Title: Optimal stratification of sampling frames for multipurpose
sampling surveys
Diff between SamplingStrata versions 0.9-1 dated 2011-07-23 and 0.9-2 dated 2012-01-24
More information about SamplingStrata at CRAN
Description: In the field of sampling design (in particular for
stratified sampling), this package offers an approach for the
determination of the best stratification of a sampling frame,
the one that ensures the minimum sample size under the
condition to satisfy precision constraints in a multivariate
and multidomain case. This approach is based on the use of the
genetic algorithm: each solution (i.e. a particular partition
in strata of the sampling frame) is considered as an individual
in a population; the fitness of all individuals is evaluated by
calculating (using the Bethel-Chromy algorithm) the sampling
size satisfying accuracy constraints on the target estimates.
Functions in the package allows to: (a) analyse the obtained
results of the optimisation step; (b) assign the new strata
labels to the sampling frame; (c) select a sample from the new
frame accordingly to the best allocation. There is also a
function that allows to build the most important input to the
optimisation step, i.e. the "strata" dataframe, containing
information (means and standard errors) regarding the
distributions of the target variables in the different strata,
using the sampling frame or using data from previous rounds of
the same survey. As auxiliary variables that concur to the
stratification can be only of the categorical type, the package
offers a function ("var.bin") that allows to transform
continuous variables into categorical ordinal ones by applying
a k-means univariate clustering method. Functions for the
execution of the genetic algorithm are a modified version of
the functions in the "genalg" package.
Author: Giulio Barcaroli
Maintainer: Giulio Barcaroli
SamplingStrata-0.9-1/SamplingStrata/inst/doc/distributionplot.pdf |only
SamplingStrata-0.9-1/SamplingStrata/inst/doc/executionplot.pdf |only
SamplingStrata-0.9-1/SamplingStrata/inst/doc/fancyvrb.sty |only
SamplingStrata-0.9-1/SamplingStrata/inst/doc/natbib.sty |only
SamplingStrata-0.9-1/SamplingStrata/inst/doc/sweave.sty |only
SamplingStrata-0.9-2/SamplingStrata/DESCRIPTION | 22
SamplingStrata-0.9-2/SamplingStrata/LICENCE.cda |only
SamplingStrata-0.9-2/SamplingStrata/MD5 |only
SamplingStrata-0.9-2/SamplingStrata/NAMESPACE | 2
SamplingStrata-0.9-2/SamplingStrata/R/Bethel.r | 469 ++++++----
SamplingStrata-0.9-2/SamplingStrata/R/strataGenalg.R | 7
SamplingStrata-0.9-2/SamplingStrata/R/updateStrata.r | 121 +-
SamplingStrata-0.9-2/SamplingStrata/R/var.bin.R |only
SamplingStrata-0.9-2/SamplingStrata/R/verify.R | 2
SamplingStrata-0.9-2/SamplingStrata/inst/doc/SamplingStrataVignette.Rnw | 56 -
SamplingStrata-0.9-2/SamplingStrata/inst/doc/SamplingStrataVignette.pdf |binary
SamplingStrata-0.9-2/SamplingStrata/man/bethel.Rd | 14
SamplingStrata-0.9-2/SamplingStrata/man/buildStrataDF.Rd | 9
SamplingStrata-0.9-2/SamplingStrata/man/checkInput.Rd | 9
SamplingStrata-0.9-2/SamplingStrata/man/optimizeStrata.Rd | 13
SamplingStrata-0.9-2/SamplingStrata/man/selectSample.Rd | 15
SamplingStrata-0.9-2/SamplingStrata/man/updateFrame.Rd | 12
SamplingStrata-0.9-2/SamplingStrata/man/updateStrata.Rd | 11
SamplingStrata-0.9-2/SamplingStrata/man/var.bin.Rd |only
SamplingStrata-0.9-2/SamplingStrata/man/verify.Rd | 10
SamplingStrata-0.9-2/SamplingStrata/vignettes |only
26 files changed, 435 insertions(+), 337 deletions(-)
Permanent link
More information about OneHandClapping at CRAN
Permanent link
Title: Moments, cumulants, skewness, kurtosis and related tests
Diff between moments versions 0.12 dated 2011-01-24 and 0.13 dated 2012-01-24
Description: Functions to calculate: moments, Pearson's kurtosis,
Geary's kurtosis and skewness; tests related to them
(Anscombe-Glynn, D'Agostino, Bonett-Seier).
Author: Lukasz Komsta
Maintainer: Lukasz Komsta
DESCRIPTION | 8 ++++----
MD5 |only
R/anscombe.test.R | 2 +-
3 files changed, 5 insertions(+), 5 deletions(-)
Title: Regional frequency analysis using L-moments
Diff between lmomRFA versions 2.3 dated 2010-08-22 and 2.4 dated 2012-01-24
Description: Functions for regional frequency analysis using the
methods of J. R. M. Hosking and J. R. Wallis (1997), "Regional
frequency analysis: an approach based on L-moments".
Author: J. R. M. Hosking
Maintainer: J. R. M. Hosking
lmomRFA-2.3/lmomRFA/data/Appalach.r |only
lmomRFA-2.3/lmomRFA/data/Cascades.r |only
lmomRFA-2.3/lmomRFA/data/Maxwind.r |only
lmomRFA-2.4/lmomRFA/DESCRIPTION | 9 +++++----
lmomRFA-2.4/lmomRFA/MD5 |only
lmomRFA-2.4/lmomRFA/NEWS | 13 +++++++++++++
lmomRFA-2.4/lmomRFA/R/lmomRFA.r | 2 +-
lmomRFA-2.4/lmomRFA/data/Appalach.rda |only
lmomRFA-2.4/lmomRFA/data/Cascades.rda |only
lmomRFA-2.4/lmomRFA/data/Maxwind.rda |only
lmomRFA-2.4/lmomRFA/man/Appalach.Rd | 4 ++--
lmomRFA-2.4/lmomRFA/man/Cascades.Rd | 3 +--
lmomRFA-2.4/lmomRFA/man/Maxwind.Rd | 5 +++--
lmomRFA-2.4/lmomRFA/man/clukm.Rd | 2 +-
lmomRFA-2.4/lmomRFA/man/evplot.rfd.Rd | 2 +-
lmomRFA-2.4/lmomRFA/man/regavlmom.Rd | 1 -
lmomRFA-2.4/lmomRFA/man/regdata.Rd | 3 +--
lmomRFA-2.4/lmomRFA/man/reglmr.Rd | 1 -
lmomRFA-2.4/lmomRFA/man/regquant.Rd | 1 -
lmomRFA-2.4/lmomRFA/man/regtst.Rd | 2 --
lmomRFA-2.4/lmomRFA/man/sitequant.Rd | 1 -
lmomRFA-2.4/lmomRFA/man/summary.regtst.Rd | 1 -
lmomRFA-2.4/lmomRFA/src/lmomRFA.f | 4 ++++
23 files changed, 32 insertions(+), 22 deletions(-)
Title: L-moments
Diff between lmom versions 1.5 dated 2009-11-29 and 1.6 dated 2012-01-24
Description: Functions related to L-moments: computation of L-moments
of distributions and data samples; parameter estimation;
L-moment ratio diagram; plot vs. quantiles of an extreme-value
distribution.
Author: J. R. M. Hosking
Maintainer: J. R. M. Hosking
DESCRIPTION | 8 ++++----
MD5 |only
NEWS | 19 +++++++++++++++++++
R/lmom.r | 39 ++++++++++++++++++++++-----------------
man/cdfexp.Rd | 2 +-
man/cdfgev.Rd | 6 +++---
man/cdfglo.Rd | 7 ++++---
man/cdfgno.Rd | 2 +-
man/cdfgpa.Rd | 4 ++--
man/cdfgum.Rd | 4 ++--
man/cdfkap.Rd | 2 +-
man/cdfln3.Rd | 2 +-
man/cdfnor.Rd | 2 +-
man/cdfwak.Rd | 2 +-
man/evplot.Rd | 2 +-
man/lmrd.Rd | 25 +++++++++++++++++--------
src/lmom.f | 24 ++++++++++++------------
17 files changed, 92 insertions(+), 58 deletions(-)
Title: General Smoothing Splines
Diff between gss versions 2.0-8 dated 2012-01-06 and 2.0-9 dated 2012-01-24
Description: A comprehensive package for structural multivariate
function estimation using smoothing splines.
Author: Chong Gu
Maintainer: Chong Gu
gss-2.0-8/gss/R/zzz.R |only
gss-2.0-9/gss/ChangeLog | 8 ++++++++
gss-2.0-9/gss/DESCRIPTION | 8 ++++----
gss-2.0-9/gss/MD5 | 15 +++++++--------
gss-2.0-9/gss/NAMESPACE | 2 +-
gss-2.0-9/gss/R/project.ssanova.R | 2 ++
gss-2.0-9/gss/man/ColoCan.Rd | 2 +-
gss-2.0-9/gss/man/Sachs.Rd | 32 ++++++++++++++++++--------------
gss-2.0-9/gss/man/esc.Rd | 3 ---
9 files changed, 41 insertions(+), 31 deletions(-)
Title: R interface to Fortran 77 implementation of CALINE3
Diff between CALINE3 versions 1.0 dated 2012-01-24 and 1.0-2 dated 2012-01-24
Description: Used by Rcaline
Author: David Holstius
Maintainer: David Holstius
DESCRIPTION | 8
MD5 | 4
src/libcaline3.f | 585 +++++++++++++++++++++++++++----------------------------
3 files changed, 299 insertions(+), 298 deletions(-)
Title: Algorithms for Quantitative Pedology
Diff between aqp versions 0.99-9.1 dated 2012-01-03 and 0.99-9.51 dated 2012-01-24
Description: A collection of algorithms related to modeling of soil
resources, soil classification, soil profile aggregation, and
visualization.
Author: Dylan Beaudette
Maintainer: Dylan Beaudette
aqp-0.99-9.1/aqp/inst/doc/aqp-vignette.Rnw |only
aqp-0.99-9.1/aqp/inst/doc/aqp-vignette.pdf |only
aqp-0.99-9.1/aqp/inst/doc/owens_lake_profile.jpg |only
aqp-0.99-9.1/aqp/inst/doc/pinn_profile.jpg |only
aqp-0.99-9.1/aqp/inst/doc/profile_sketch.png |only
aqp-0.99-9.1/aqp/inst/doc/sfrec_profile.jpg |only
aqp-0.99-9.51/aqp/.Rinstignore |only
aqp-0.99-9.51/aqp/DESCRIPTION | 19 +-
aqp-0.99-9.51/aqp/MD5 | 51 +++----
aqp-0.99-9.51/aqp/NAMESPACE | 1
aqp-0.99-9.51/aqp/NEWS | 19 ++
aqp-0.99-9.51/aqp/R/SoilProfileCollection-iterators.R | 54 +++++---
aqp-0.99-9.51/aqp/R/SoilProfileCollection-methods.R | 31 +++-
aqp-0.99-9.51/aqp/R/SoilProfileCollection-slice-methods.R | 13 +
aqp-0.99-9.51/aqp/R/munsell2rgb.R | 5
aqp-0.99-9.51/aqp/R/profile_compare.R | 2
aqp-0.99-9.51/aqp/R/profile_plot.R | 20 ++-
aqp-0.99-9.51/aqp/R/setters.R | 64 ++++-----
aqp-0.99-9.51/aqp/R/soil_slotting.R | 1
aqp-0.99-9.51/aqp/R/zzz.R | 11 +
aqp-0.99-9.51/aqp/data/sp5.rda |binary
aqp-0.99-9.51/aqp/inst/doc/aqp-intro.pdf |binary
aqp-0.99-9.51/aqp/man/SPC-plotting.Rd | 4
aqp-0.99-9.51/aqp/man/SPC-utils.Rd | 13 +
aqp-0.99-9.51/aqp/man/SoilProfileCollection-class.Rd | 1
aqp-0.99-9.51/aqp/man/ca630.Rd | 19 +-
aqp-0.99-9.51/aqp/man/profileApply-methods.Rd | 32 +++-
aqp-0.99-9.51/aqp/man/sp5.Rd | 93 +++++++++++++-
aqp-0.99-9.51/aqp/vignettes |only
29 files changed, 317 insertions(+), 136 deletions(-)
Title: A package for statistical analysis in epidemiology.
Diff between Epi versions 1.1.24 dated 2011-07-25 and 1.1.33 dated 2012-01-24
Description: Functions for demographic and epidemiological analysis in
the Lexis diagram, i.e. register and cohort follow-up data,
including interval censored data and representation of
multistate data. Also some useful functions for tabulation and
plotting. Contains some epidemiological datasets.
Author: Bendix Carstensen, Martyn Plummer, Esa Laara, Michael Hills et.
al.
Maintainer: Bendix Carstensen
Epi-1.1.24/Epi/R/apc.lines.R |only
Epi-1.1.24/Epi/data/datalist |only
Epi-1.1.33/Epi/CHANGES | 88 ++++++++++++++++++++--
Epi-1.1.33/Epi/DESCRIPTION | 12 +--
Epi-1.1.33/Epi/MD5 |only
Epi-1.1.33/Epi/NAMESPACE | 4 +
Epi-1.1.33/Epi/R/MS.boxes.R | 40 ++++++----
Epi-1.1.33/Epi/R/N2Y.r |only
Epi-1.1.33/Epi/R/apc.fit.R | 23 +++++
Epi-1.1.33/Epi/R/apc.plot.R | 131 +++++++++++++++++++++++++++++++++-
Epi-1.1.33/Epi/R/cutLexis.R | 8 +-
Epi-1.1.33/Epi/R/factorize.R |only
Epi-1.1.33/Epi/R/gen.exp.R |only
Epi-1.1.33/Epi/R/lexis.R | 82 ++++++++++++---------
Epi-1.1.33/Epi/R/splitLexis.R | 30 +++++--
Epi-1.1.33/Epi/R/stack.Lexis.R | 24 +-----
Epi-1.1.33/Epi/R/stattable.R | 9 +-
Epi-1.1.33/Epi/data/B.dk.rda |only
Epi-1.1.33/Epi/data/DMconv.rda |binary
Epi-1.1.33/Epi/data/DMlate.rda |binary
Epi-1.1.33/Epi/data/DMrand.rda |binary
Epi-1.1.33/Epi/data/M.dk.rda |only
Epi-1.1.33/Epi/data/N.dk.rda |only
Epi-1.1.33/Epi/data/S.typh.rda |binary
Epi-1.1.33/Epi/data/Y.dk.rda |only
Epi-1.1.33/Epi/data/bdendo.rda |binary
Epi-1.1.33/Epi/data/bdendo11.rda |binary
Epi-1.1.33/Epi/data/births.rda |binary
Epi-1.1.33/Epi/data/blcaIT.rda |binary
Epi-1.1.33/Epi/data/brv.rda |binary
Epi-1.1.33/Epi/data/diet.rda |binary
Epi-1.1.33/Epi/data/ewrates.rda |binary
Epi-1.1.33/Epi/data/gmortDK.rda |binary
Epi-1.1.33/Epi/data/hivDK.rda |binary
Epi-1.1.33/Epi/data/lep.rda |binary
Epi-1.1.33/Epi/data/lungDK.rda |binary
Epi-1.1.33/Epi/data/mortDK.rda |binary
Epi-1.1.33/Epi/data/nickel.rda |binary
Epi-1.1.33/Epi/data/occup.rda |binary
Epi-1.1.33/Epi/data/thoro.rda |binary
Epi-1.1.33/Epi/inst/doc/Follow-up.pdf |binary
Epi-1.1.33/Epi/man/B.dk.Rd |only
Epi-1.1.33/Epi/man/DMlate.Rd | 5 -
Epi-1.1.33/Epi/man/Lexis.Rd | 68 +++++++++--------
Epi-1.1.33/Epi/man/M.dk.Rd |only
Epi-1.1.33/Epi/man/MS.boxes.Rd | 41 ++++++----
Epi-1.1.33/Epi/man/N.dk.Rd |only
Epi-1.1.33/Epi/man/N2Y.Rd |only
Epi-1.1.33/Epi/man/Y.dk.Rd |only
Epi-1.1.33/Epi/man/apc.lines.Rd | 28 ++++---
Epi-1.1.33/Epi/man/cal.yr.Rd | 2
Epi-1.1.33/Epi/man/ci.lin.Rd | 2
Epi-1.1.33/Epi/man/cutLexis.Rd | 5 +
Epi-1.1.33/Epi/man/gen.exp.Rd |only
Epi-1.1.33/Epi/man/stack.Lexis.Rd | 13 ++-
Epi-1.1.33/Epi/man/start.Lexis.Rd | 16 ++--
Epi-1.1.33/Epi/man/stattable.Rd | 6 -
Epi-1.1.33/Epi/man/time.scales.Rd | 5 -
Epi-1.1.33/Epi/man/transform.Lexis.Rd | 47 +++++++++---
59 files changed, 504 insertions(+), 185 deletions(-)
Title: Visualization and Imputation of Missing Values
Diff between VIM versions 2.0.4 dated 2011-08-01 and 3.0.0 dated 2012-01-24
Description: This package introduces new tools for the visualization of
missing and/or imputed values, which can be used for exploring
the data and the structure of the missing and/or imputed
values. Depending on this structure of the missing values, the
corresponding methods may help to identify the mechanism
generating the missings and allows to explore the data
including missing values. In addition, the quality of
imputation can be visually explored using various univariate,
bivariate, multiple and multivariate plot methods. A graphical
user interface allows an easy handling of the implemented plot
methods.
Author: Matthias Templ, Andreas Alfons, Alexander Kowarik, Bernd
Prantner
Maintainer: Matthias Templ
VIM-2.0.4/VIM/R/initialise.R |only
VIM-2.0.4/VIM/inst/doc/.directory |only
VIM-2.0.4/VIM/inst/doc/Sweave.sty |only
VIM-2.0.4/VIM/inst/doc/VIM-EU-SILC.bib |only
VIM-2.0.4/VIM/inst/doc/fig-aggr.pdf |only
VIM-2.0.4/VIM/inst/doc/fig-margin.pdf |only
VIM-2.0.4/VIM/inst/doc/fig-matrix.pdf |only
VIM-2.0.4/VIM/inst/doc/fig-parallel.pdf |only
VIM-2.0.4/VIM/inst/doc/fig-spine.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot1.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot2.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot3.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot4.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot5.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot6.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot7.pdf |only
VIM-2.0.4/VIM/inst/doc/screenshot8.pdf |only
VIM-3.0.0/VIM/DESCRIPTION | 26 -
VIM-3.0.0/VIM/MD5 |only
VIM-3.0.0/VIM/R/TKRaggr.R | 14
VIM-3.0.0/VIM/R/TKRmarginmatrix.R | 17
VIM-3.0.0/VIM/R/TKRmatrixplot.R | 14
VIM-3.0.0/VIM/R/TKRparcoordMiss.R | 34 +
VIM-3.0.0/VIM/R/TKRpbox.R | 17
VIM-3.0.0/VIM/R/TKRscattmatrixMiss.R | 19 -
VIM-3.0.0/VIM/R/aggr.R | 167 ++++++---
VIM-3.0.0/VIM/R/barMiss.R | 157 ++++++--
VIM-3.0.0/VIM/R/colormapMiss.R | 44 +-
VIM-3.0.0/VIM/R/growdotMiss.R | 64 ++-
VIM-3.0.0/VIM/R/histMiss.R | 540 +++++++++++++++++-------------
VIM-3.0.0/VIM/R/hotdeck.R | 1
VIM-3.0.0/VIM/R/irmi.R | 32 +
VIM-3.0.0/VIM/R/kNNFaster.R | 1
VIM-3.0.0/VIM/R/mapMiss.R | 64 ++-
VIM-3.0.0/VIM/R/marginmatrix.R | 8
VIM-3.0.0/VIM/R/marginplot.R | 96 +++--
VIM-3.0.0/VIM/R/matrixplot.R | 114 +++++-
VIM-3.0.0/VIM/R/mosaicMiss.R | 49 ++
VIM-3.0.0/VIM/R/pairsVIM.R | 30 +
VIM-3.0.0/VIM/R/parcoordMiss.R | 70 ++-
VIM-3.0.0/VIM/R/pbox.R | 112 ++++--
VIM-3.0.0/VIM/R/rugNA.R | 18 -
VIM-3.0.0/VIM/R/scattJitt.R | 80 +++-
VIM-3.0.0/VIM/R/scattMiss.R | 120 ++++--
VIM-3.0.0/VIM/R/scattmatrixMiss.R | 88 +++-
VIM-3.0.0/VIM/R/spineMiss.R | 147 ++++++--
VIM-3.0.0/VIM/R/utils.R | 91 ++++-
VIM-3.0.0/VIM/R/vmGUImenu.R | 417 +++++++++++++++++++++--
VIM-3.0.0/VIM/R/zzz.R | 2
VIM-3.0.0/VIM/inst/doc/VIM-EU-SILC.pdf |binary
VIM-3.0.0/VIM/inst/doc/VIM-Imputation.Rnw |only
VIM-3.0.0/VIM/inst/doc/VIM-Imputation.pdf |only
VIM-3.0.0/VIM/man/VIM-package.Rd | 44 +-
VIM-3.0.0/VIM/man/aggr.Rd | 85 +++-
VIM-3.0.0/VIM/man/barMiss.Rd | 62 ++-
VIM-3.0.0/VIM/man/bgmap.Rd | 5
VIM-3.0.0/VIM/man/colormapMiss.Rd | 50 +-
VIM-3.0.0/VIM/man/growdotMiss.Rd | 53 +-
VIM-3.0.0/VIM/man/histMiss.Rd | 63 ++-
VIM-3.0.0/VIM/man/hotdeck.Rd | 6
VIM-3.0.0/VIM/man/initialise.Rd | 4
VIM-3.0.0/VIM/man/irmi.Rd | 17
VIM-3.0.0/VIM/man/kNN.Rd | 14
VIM-3.0.0/VIM/man/mapMiss.Rd | 46 +-
VIM-3.0.0/VIM/man/marginmatrix.Rd | 44 +-
VIM-3.0.0/VIM/man/marginplot.Rd | 74 ++--
VIM-3.0.0/VIM/man/matrixplot.Rd | 63 ++-
VIM-3.0.0/VIM/man/mosaicMiss.Rd | 42 +-
VIM-3.0.0/VIM/man/pairsVIM.Rd | 23 -
VIM-3.0.0/VIM/man/parcoordMiss.Rd | 76 ++--
VIM-3.0.0/VIM/man/pbox.Rd | 77 ++--
VIM-3.0.0/VIM/man/prepare.Rd | 6
VIM-3.0.0/VIM/man/print.aggr.Rd | 2
VIM-3.0.0/VIM/man/print.summary.aggr.Rd | 2
VIM-3.0.0/VIM/man/rugNA.Rd | 29 +
VIM-3.0.0/VIM/man/scattJitt.Rd | 57 ++-
VIM-3.0.0/VIM/man/scattMiss.Rd | 64 ++-
VIM-3.0.0/VIM/man/scattmatrixMiss.Rd | 57 ++-
VIM-3.0.0/VIM/man/spineMiss.Rd | 79 ++--
VIM-3.0.0/VIM/man/summary.aggr.Rd | 2
VIM-3.0.0/VIM/man/vmGUImenu.Rd | 30 +
VIM-3.0.0/VIM/src/Makevars | 4
VIM-3.0.0/VIM/src/gowerD.cpp | 4
VIM-3.0.0/VIM/vignettes |only
84 files changed, 2733 insertions(+), 1104 deletions(-)
Title: Estimate a Log-Concave Probability Mass function from Discrete
i.i.d. Observations
Diff between logcondiscr versions 1.0.1 dated 2011-12-01 and 1.0.2 dated 2012-01-24
Description: Given independent and identically distributed observations
X(1), ..., X(n), this package allows to compute the maximum
likelihood estimator (MLE) of probability mass function (pmf)
under the assumption that it is log-concave, see Weyermann
(2007) and Balabdaoui, Jankowski, Rufibach, and Pavlides
(2012). The main functions of the package are 'logConDiscrMLE'
that allows computation of the log-concave MLE, 'logConDiscrCI'
that computes pointwise confidence bands for the MLE, and
'kInflatedLogConDiscr' that computes a mixture of a log-concave
PMF and a point mass at k.
Author: Kaspar Rufibach
Maintainer: Kaspar Rufibach
DESCRIPTION | 24 +++-
MD5 | 20 +--
NEWS | 9 +
R/logConDiscrCI.r | 2
R/logConDiscrMLE.r | 240 ++++++++++++++++++++++----------------------
man/Triangular.Rd | 8 -
man/internal.Rd | 2
man/kInflatedLogConDiscr.Rd | 2
man/logConDiscrCI.Rd | 4
man/logConDiscrMLE.Rd | 2
man/logcondiscr-package.Rd | 11 --
11 files changed, 169 insertions(+), 155 deletions(-)
Title: Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files
Diff between xlsx versions 0.4.0 dated 2012-01-15 and 0.4.1 dated 2012-01-24
Description: Provide R functions to read/write/format Excel 2007 and
Excel 97/2000/XP/2003 file formats.
Author: Adrian A. Dragulescu
Maintainer: Adrian A. Dragulescu
DESCRIPTION | 8 ++++----
MD5 | 22 +++++++++++-----------
NEWS | 11 +++++++++++
R/Workbook.R | 5 ++++-
R/addDataFrame.R | 20 ++++++++++----------
R/read.xlsx2.R | 2 +-
inst/doc/xlsx.pdf |binary
inst/java/RInterface.jar |binary
inst/tests/lib_tests_xlsx.R | 40 ++++++++++++++++++++++++++++++++++++----
man/xlsx-package.Rd | 4 ++--
other/RInterface.java | 7 +++++--
other/make.package.R | 4 ++--
12 files changed, 86 insertions(+), 37 deletions(-)
Title: Regression Estimation and Presentation
Diff between rockchalk versions 1.3.2 dated 2011-12-07 and 1.4 dated 2012-01-24
Description: A collection of functions for ease of presentation and
interpretation of regression analysis. See the outreg function
for a way to generate LaTeX tables of regression models and
mcGraph for creating 3-dimensional regression plots. The
package title "rockchalk" refers to the expression, "Rock Chalk
Jayhawk, Go K.U.".
Author: Paul E. Johnson
Maintainer: Paul E. Johnson
rockchalk-1.3.2/rockchalk/inst/centeredRegression.R |only
rockchalk-1.3.2/rockchalk/man/lmrc.Rd |only
rockchalk-1.4/rockchalk/DESCRIPTION | 24 +--
rockchalk-1.4/rockchalk/MD5 | 50 ++++---
rockchalk-1.4/rockchalk/NAMESPACE | 16 ++
rockchalk-1.4/rockchalk/R/genCorrelatedData.R | 20 ++
rockchalk-1.4/rockchalk/R/lmrc.R | 141 ++++----------------
rockchalk-1.4/rockchalk/R/magRange.R | 2
rockchalk-1.4/rockchalk/R/mcDiagnose.R |only
rockchalk-1.4/rockchalk/R/meanCenter.R |only
rockchalk-1.4/rockchalk/R/outreg.R | 2
rockchalk-1.4/rockchalk/R/perspEmpty.R | 70 +++++----
rockchalk-1.4/rockchalk/R/plotPlane.R |only
rockchalk-1.4/rockchalk/R/plotSeq.R | 28 ++-
rockchalk-1.4/rockchalk/R/rockchalk-package.R | 34 ++++
rockchalk-1.4/rockchalk/inst/.Rhistory |only
rockchalk-1.4/rockchalk/inst/ChangeLog | 39 +++++
rockchalk-1.4/rockchalk/inst/examples |only
rockchalk-1.4/rockchalk/man/genCorrelatedData.Rd | 20 ++
rockchalk-1.4/rockchalk/man/getAuxRsq.Rd |only
rockchalk-1.4/rockchalk/man/getDeltaRsquare.Rd |only
rockchalk-1.4/rockchalk/man/getVIF.Rd |only
rockchalk-1.4/rockchalk/man/lmAuxiliary.Rd |only
rockchalk-1.4/rockchalk/man/mcDiagnose.Rd |only
rockchalk-1.4/rockchalk/man/meanCenter.Rd |only
rockchalk-1.4/rockchalk/man/perspEmpty.Rd | 7
rockchalk-1.4/rockchalk/man/plotPlane.Rd |only
rockchalk-1.4/rockchalk/man/plotSeq.Rd | 10 +
rockchalk-1.4/rockchalk/man/religioncrime.Rd | 1
rockchalk-1.4/rockchalk/man/residualCenter.Rd |only
rockchalk-1.4/rockchalk/man/rockchalk-package.Rd | 36 ++++-
rockchalk-1.4/rockchalk/man/standardize.Rd |only
32 files changed, 301 insertions(+), 199 deletions(-)
Title: Functions for analysing epidemiological data
Diff between epiR versions 0.9-35 dated 2012-01-11 and 0.9-36 dated 2012-01-24
Description: A package for analysing epidemiological data. Contains
functions for directly and indirectly adjusting measures of
disease frequency, quantifying measures of association on the
basis of single or multiple strata of count data presented in a
contingency table, and computing confidence intervals around
incidence risk and incidence rate estimates. Miscellaneous
functions for use in meta-analysis, diagnostic test
interpretation, and sample size calculations.
Author: Mark Stevenson
Maintainer: Mark Stevenson
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
R/epi.2by2.R | 13 ++++++++-----
doc/epiR.pdf |binary
man/epi.2by2.Rd | 17 +++++++++++------
5 files changed, 27 insertions(+), 19 deletions(-)
Title: Mining frequent sequences
Diff between arulesSequences versions 0.2-0 dated 2012-01-15 and 0.2-1 dated 2012-01-24
More information about arulesSequences at CRAN
Description: Add-on for arules to handle and mine frequent sequences.
Provides interfaces to the C++ implementation of cSPADE by
Mohammed J. Zaki.
Author: Christian Buchta and Michael Hahsler, with contributions from
Daniel Diaz
Maintainer: Christian Buchta
arulesSequences-0.2-0/arulesSequences/cleanup |only
arulesSequences-0.2-0/arulesSequences/cleanup.win |only
arulesSequences-0.2-0/arulesSequences/configure |only
arulesSequences-0.2-0/arulesSequences/configure.win |only
arulesSequences-0.2-0/arulesSequences/src/TPOSE/mmap.c |only
arulesSequences-0.2-0/arulesSequences/src/TPOSE/mmap.h |only
arulesSequences-0.2-0/arulesSequences/src/cSPADE/mmap.h |only
arulesSequences-0.2-1/arulesSequences/CHANGELOG | 13 +-
arulesSequences-0.2-1/arulesSequences/DESCRIPTION | 9 -
arulesSequences-0.2-1/arulesSequences/MD5 | 45 ++++-----
arulesSequences-0.2-1/arulesSequences/R/05read_write.R | 50 ++++++----
arulesSequences-0.2-1/arulesSequences/WINDOWS | 22 +---
arulesSequences-0.2-1/arulesSequences/data/zaki.rda |binary
arulesSequences-0.2-1/arulesSequences/man/SPcontrol-class.Rd | 9 +
arulesSequences-0.2-1/arulesSequences/man/cspade.Rd | 7 +
arulesSequences-0.2-1/arulesSequences/src/Makevars |only
arulesSequences-0.2-1/arulesSequences/src/Makevars.win |only
arulesSequences-0.2-1/arulesSequences/src/TPOSE/Makefile | 26 ++---
arulesSequences-0.2-1/arulesSequences/src/TPOSE/b2a.cc | 5 -
arulesSequences-0.2-1/arulesSequences/src/TPOSE/exttpose.cc | 14 ++
arulesSequences-0.2-1/arulesSequences/src/TPOSE/mmap-win32.c |only
arulesSequences-0.2-1/arulesSequences/src/TPOSE/mmap-win32.h |only
arulesSequences-0.2-1/arulesSequences/src/cSPADE/Makefile | 12 +-
arulesSequences-0.2-1/arulesSequences/src/cSPADE/extl2.cc | 10 +-
arulesSequences-0.2-1/arulesSequences/src/cSPADE/mmap-win32.h |only
arulesSequences-0.2-1/arulesSequences/src/cSPADE/partition.cc | 5 -
arulesSequences-0.2-1/arulesSequences/src/cSPADE/sequence.cc | 4
arulesSequences-0.2-1/arulesSequences/tests/Rgui.R |only
arulesSequences-0.2-1/arulesSequences/tests/makebin.R | 16 +--
arulesSequences-0.2-1/arulesSequences/tests/makebin.Rout.save | 16 +--
30 files changed, 148 insertions(+), 115 deletions(-)
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-03-19 0.1.7.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-03-19 0.1.7.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-04-13 1.22
2009-11-03 1.21
2008-12-21 1.2
2008-07-28 1.1
2007-11-08 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-03-19 0.1.7.6
2009-04-04 0.1.7.5
2007-11-03 0.1.7.4
2007-10-15 0.1.7.3
2007-10-10 0.1.7.2
2006-04-20 0.1.6.8