Wed, 15 Feb 2012

Package R2OpenBUGS updated to version 3.2-1.4 with previous version 3.2-1.3 dated 2011-12-30

Title: Running OpenBUGS from R
Description: Using this package, it is possible to call a BUGS model, summarize inferences and convergence in a table and graph, and save the simulations in arrays for easy access in R.
Author: originally written as R2WinBUGS by Andrew Gelman ; changes and packaged by Sibylle Sturtz and Uwe Ligges . With considerable contributions by Gregor Gorjanc and Jouni Kerman . Adapted to R2OpenBUGS from R2WinBUGS by Neal Thomas.
Maintainer: Neal Thomas

Diff between R2OpenBUGS versions 3.2-1.3 dated 2011-12-30 and 3.2-1.4 dated 2012-02-15

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Package RXMCDA updated to version 1.4.1 with previous version 1.4.0 dated 2011-04-01

Title: RXMCDA
Description: The RXMCDA library for the R statistical software allows you to read many XMCDA tags and transform them into R variables which are then usable in your MCDA algorithms written in R. The library also allows to write certain R variables into XML files according to the XMCDA standard.
Author: Patrick Meyer, Sebastien Bigaret.
Maintainer: Patrick Meyer

Diff between RXMCDA versions 1.4.0 dated 2011-04-01 and 1.4.1 dated 2012-02-15

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Package gamlss.util updated to version 4.1-1 with previous version 4.0-5 dated 2011-05-02

Title: GAMLSS Utilities.
Description: Extra utilities for GAMLSS models.
Author: Mikis Stasinopoulos , Bob Rigby , Paul Eilers
Maintainer: Mikis Stasinopoulos

Diff between gamlss.util versions 4.0-5 dated 2011-05-02 and 4.1-1 dated 2012-02-15

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Package Cubist updated to version 0.0.11 with previous version 0.0.8 dated 2011-06-22

Title: Rule- and Instance-Based Regression Modeling
Description: Regression modeling using rules with added instance-based corrections
Author: Max Kuhn, Steve Weston, Chris Keefer, Nathan Coulter. C code for Cubist by Ross Quinlan
Maintainer: Max Kuhn

Diff between Cubist versions 0.0.8 dated 2011-06-22 and 0.0.11 dated 2012-02-15

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Package postCP updated to version 1.05 with previous version 1.0 dated 2012-02-10

Title: A package to estimate posterior probabilities in change-point models using constrained HMM
Description: The functions are used for change-point problems, after an initial set of change-points within the data has already been obtained. The function postCP obtains estimates of posterior probabilities of change-point and hidden states for each observation, and confidence intervals for the positions of the change-point. The function postCPsample obtains random samples of sets of change-points using the output of the postCP function.
Author: Gregory Nuel and The Minh Luong
Maintainer: The Minh Luong

Diff between postCP versions 1.0 dated 2012-02-10 and 1.05 dated 2012-02-15

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Package memisc updated to version 0.95-38 with previous version 0.95-37 dated 2011-12-08

Title: Tools for Management of Survey Data, Graphics, Programming, Statistics, and Simulation
Description: One of the aims of this package is to make life easier for useRs who deal with survey data sets. It provides an infrastructure for the management of survey data including value labels, definable missing values, recoding of variables, production of code books, and import of (subsets of) SPSS and Stata files. Further, it provides functionality to produce tables and data frames of arbitrary descriptive statistics and (almost) publication-ready tables of regression model estimates. Also some convenience tools for graphics, programming, and simulation are provided.
Author: Martin Elff
Maintainer: Martin Elff

Diff between memisc versions 0.95-37 dated 2011-12-08 and 0.95-38 dated 2012-02-15

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Package ks updated to version 1.8.6 with previous version 1.8.5 dated 2011-12-09

Title: Kernel smoothing
Description: Kernel smoothers for univariate and multivariate data
Author: Tarn Duong
Maintainer: Tarn Duong

Diff between ks versions 1.8.5 dated 2011-12-09 and 1.8.6 dated 2012-02-15

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Package Geneland updated to version 4.0.0 with previous version 3.3.2 dated 2012-02-06

Title: Detection of structure from multilocus genetic data.
Description: Stochastic simulation and MCMC inference of structure from genetic data.
Author: Gilles Guillot, Filipe Santos, Arnaud Estoup
Maintainer: Gilles Guillot

Diff between Geneland versions 3.3.2 dated 2012-02-06 and 4.0.0 dated 2012-02-15

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Package gamlss.nl updated to version 4.1-0 with previous version 4.0-5 dated 2011-05-03

Title: Fitting non linear parametric GAMLSS models
Description: This is an add on package to GAMLSS. It allows one extra method for fitting GAMLSS models. The main function nlgamlss() can fit any parametric (up to four parameter) GAMLSS distribution.
Author: Mikis Stasinopoulos , Bob Rigby with contributions from Philippe Lambert.
Maintainer: Mikis Stasinopoulos

Diff between gamlss.nl versions 4.0-5 dated 2011-05-03 and 4.1-0 dated 2012-02-15

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Package gamlss.dist updated to version 4.1-1 with previous version 4.1-0 dated 2011-11-08

Title: Distributions to be used for GAMLSS modelling.
Description: This package contains the distributions for GAMLSS modelling.
Author: Mikis Stasinopoulos , Bob Rigby with contributions from Calliope Akantziliotou, Gillian Heller, Raydonal Ospina , Nicoletta Motpan and Fiona McElduff.
Maintainer: Mikis Stasinopoulos

Diff between gamlss.dist versions 4.1-0 dated 2011-11-08 and 4.1-1 dated 2012-02-15

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Package gamlss.demo updated to version 4.1-0 with previous version 4.0-4 dated 2010-10-16

Title: Demos for GAMLSS
Description: Demos for gamlss.family distributions.
Author: Mikis Stasinopoulos , Bob Rigby , Paul Eilers , Brian Marx \email{bmarx@LSU.EDU}, Konstantinos Pateras with contributions from Larisa Kosidou.
Maintainer: Mikis Stasinopoulos

Diff between gamlss.demo versions 4.0-4 dated 2010-10-16 and 4.1-0 dated 2012-02-15

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Package gamlss.data updated to version 4.1-0 with previous version 4.0-5 dated 2011-05-02

Title: GAMLSS Data.
Description: Data for GAMLSS models.
Author: Mikis Stasinopoulos , Bob Rigby
Maintainer: Mikis Stasinopoulos

Diff between gamlss.data versions 4.0-5 dated 2011-05-02 and 4.1-0 dated 2012-02-15

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Package gamlss updated to version 4.1-2 with previous version 4.1-1 dated 2011-11-08

Title: Generalized Additive Models for Location Scale and Shape.
Description: The library for fitting GAMLSS models.
Author: Mikis Stasinopoulos , Bob Rigby with contributions from Calliope Akantziliotou
Maintainer: Mikis Stasinopoulos

Diff between gamlss versions 4.1-1 dated 2011-11-08 and 4.1-2 dated 2012-02-15

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Package SocrataR (with last version 0.5) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-01-19 0.5
2011-12-10 0.4.1

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Package Sim.DiffProcGUI updated to version 2.2 with previous version 2.1 dated 2011-11-22

Title: Graphical User Interface for Simulation of Diffusion Processes
Description: A Graphical User Interface for some functions in the Sim.DiffProc package
Author: BOUKHETALA Kamal , GUIDOUM Arsalane
Maintainer: BOUKHETALA Kamal

Diff between Sim.DiffProcGUI versions 2.1 dated 2011-11-22 and 2.2 dated 2012-02-15

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Package RNetCDF updated to version 1.5.3-1 with previous version 1.5.2-2 dated 2011-01-06

Title: R Interface to NetCDF Datasets
Description: This package provides an interface to Unidata's NetCDF library functions (version 3) and furthermore access to Unidata's UDUNITS calendar conversions. The routines and the documentation follow the NetCDF and UDUNITS C interface, so the corresponding manuals can be consulted for more detailed information.
Author: Pavel Michna
Maintainer: Pavel Michna

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Package qat updated to version 0.53 with previous version 0.52 dated 2012-02-13

Title: Quality Assurance Toolkit
Description: Performing and documenting scientific quality assurance of meteorological data.
Author: Andre Duesterhus
Maintainer: Andre Duesterhus

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Package mirt updated to version 0.2.0 with previous version 0.1-20 dated 2012-02-04

Title: Multidimensional Item Response Theory
Description: Analysis of dichotomous and polychotomous response data using latent trait models under the Item Response Theory paradigm. Includes the multivariate two- and three-parameter logistic models, confirmatory bifactor analysis, polytomous exploratory and confirmatory item response models which may include polynomial or product constructed factors, and partially-compensatory item response modeling in conjunction with other IRT models.
Author: Phil Chalmers
Maintainer: Phil Chalmers

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Package MatrixEQTL updated to version 1.5.2 with previous version 1.5.1 dated 2012-02-13

Title: Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
Description: Matrix eQTL is designed for fast eQTL analysis on large datasets. Matrix eQTL can test for association between genotype and gene expression using linear regression with either additive or ANOVA genotype effects. The models can include covariates to account for factors as population stratification, gender, and clinical variables. It also supports models with heteroscedastic and/or correlated errors, false discovery rate estimation and separate treatment of local (cis) and distant (trans) eQTLs.
Author: Andrey Shabalin
Maintainer: Andrey Shabalin

Diff between MatrixEQTL versions 1.5.1 dated 2012-02-13 and 1.5.2 dated 2012-02-15

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Package grImport updated to version 0.8-4 with previous version 0.8-3 dated 2012-01-20

Title: Importing Vector Graphics
Description: Functions for converting, importing, and drawing PostScript pictures in R plots.
Author: Paul Murrell and Richard Walton.
Maintainer: Paul Murrell

Diff between grImport versions 0.8-3 dated 2012-01-20 and 0.8-4 dated 2012-02-15

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Package glpkAPI updated to version 1.2.0 with previous version 1.1.9 dated 2012-02-13

Title: R Interface to C API of GLPK
Description: R Interface to C API of GLPK, needs GLPK Version >= 4.42
Author: Gabriel Gelius-Dietrich
Maintainer: Gabriel Gelius-Dietrich

Diff between glpkAPI versions 1.1.9 dated 2012-02-13 and 1.2.0 dated 2012-02-15

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Package fastcluster updated to version 1.1.5 with previous version 1.1.4 dated 2012-02-13

Title: Fast hierarchical clustering routines for R and Python
Description: This is a two-in-one package which provides interfaces to both R and Python. It implements fast hierarchical, agglomerative clustering routines. Part of the functionality is designed as drop-in replacement for existing routines: “linkage” in the SciPy package “scipy.cluster.hierarchy”, “hclust” in R's “stats” package, and the “flashClust” package. It provides the same functionality, with the benefit of a much faster implementation. Moreover, there are memory-saving routines for clustering of vector data, which go beyond what the existing packages provide. For information on how to install the Python files, see the file INSTALL in the source distribution.
Author: Daniel Müllner, http://math.stanford.edu/~muellner
Maintainer: Daniel Müllner

Diff between fastcluster versions 1.1.4 dated 2012-02-13 and 1.1.5 dated 2012-02-15

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Package SoPhy (with last version 1.0.40) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-10-27 1.0.40
2009-11-01 1.0.39
2009-01-14 1.0.36
2008-09-14 1.0.34
2008-08-22 1.0.33
2007-10-04 1.0.32
2006-09-23 1.0.31

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