More information about spatialprobit at CRAN
Path: /cran/new | permanent link
More information about GPvam at CRAN
Path: /cran/new | permanent link
Title: Network representations of relationships in data
Diff between qgraph versions 1.0.0 dated 2012-01-18 and 1.0.1 dated 2012-02-19
More information about qgraph at CRAN
Description: The qgraph package can be used to visualize data as
networks.
Author: Sacha Epskamp, Angelique O. J. Cramer, Lourens J. Waldorp,
Verena D. Schmittmann and Denny Borsboom
Maintainer: Sacha Epskamp
DESCRIPTION | 8 ++++----
MD5 | 12 ++++++------
NEWS | 3 +++
R/qgraph.R | 30 ++++++++++++++++++++++--------
R/qgraph.panel.R | 6 +++---
R/qgraph_loadings.R | 10 +++++-----
man/qgraph_loadings.Rd | 2 +-
7 files changed, 44 insertions(+), 27 deletions(-)
Path: /cran/updated | permanent link
Title: Generate PMML for various models
Diff between pmml versions 1.2.28 dated 2012-01-16 and 1.2.29 dated 2012-02-19
More information about pmml at CRAN
Description: The Predictive Modelling Markup Language (PMML) is a
language for representing models using XML in an application
independent way. Such models can then be shared with other
applications that support PMML (see
http://www.dmg.org/products.html). The generic pmml() function
takes an R model as its argument and returns the corresponding
PMML. Currently supported models for export include linear
regression (lm and glm), support vector machines (ksvm),
decision trees (rpart), neural networks (nnet, multinom),
association rules (arules), survival models (coxph, survreg),
random survival forests (randomSurvivalForest), and clusters
(kmeans, hclust).
Author: Graham Williams, Michael Hahsler (arules), Zementis Inc, Hemant
Ishwaran, Udaya B. Kogalur, Rajarshi Guha
Maintainer: Graham Williams
DESCRIPTION | 8 -
MD5 | 19 +--
NAMESPACE | 1
R/pmml.R | 164 ++++++++++++++++++++++++++++-
R/pmml.kmeans.R | 6 -
R/pmml.ksvm.R | 40 ++++---
R/pmml.randomForest.R | 261 ++++++++++++++++++++++++++++++++++++++---------
R/pmml.rsf.R | 114 +++++++++++++++-----
man/pmml.kmeans.Rd | 8 +
man/pmml.randomForest.Rd |only
man/pmml.rsf.Rd | 17 +--
11 files changed, 520 insertions(+), 118 deletions(-)
Path: /cran/updated | permanent link
Title: PC-Axis with R
Diff between pxR versions 0.24 dated 2011-09-29 and 0.27 dated 2012-02-19
More information about pxR at CRAN
Description: The pxR package provides a set of functions for reading
and writing PC-Axis files, used by different statistical
organizations around the globe for data disemination.
Author: Francisco J. Viciana [aut], Carlos J. Gil Bellosta [aut], Oscar
Perpinan Lamigueiro [cre, aut], Emilio Torres Manzanera [ctb],
Vicente David Canto Casasola [ctb], Jorge Ivan Velez [ctb]
Maintainer: Oscar Perpinan Lamigueiro
pxR-0.24/pxR/R/read.px.alt.R |only
pxR-0.27/pxR/DESCRIPTION | 27 ++--
pxR-0.27/pxR/MD5 | 14 +-
pxR-0.27/pxR/R/as.data.frame.px.R | 44 +++++--
pxR-0.27/pxR/R/read.px.R | 212 ++++++++++++++---------------------
pxR-0.27/pxR/R/read.pxini.R |only
pxR-0.27/pxR/man/as.data.frame.px.Rd | 19 +--
pxR-0.27/pxR/man/write.px.Rd | 2
pxR-0.27/pxR/pxR-Ex.R | 4
9 files changed, 156 insertions(+), 166 deletions(-)
Path: /cran/updated | permanent link
Title: Solve systems of non linear equations
Diff between nleqslv versions 1.9.2 dated 2011-12-12 and 1.9.3 dated 2012-02-19
More information about nleqslv at CRAN
Description: Solve a system of non linear equations using a Broyden or
a Newton method with a choice of global strategies such as
linesearch and trust region. There are options for using a
numerical or an analytical jacobian and fixed or automatic
scaling of parameters.
Author: Berend Hasselman
Maintainer: Berend Hasselman
DESCRIPTION | 17 +++---
MD5 | 17 +++---
NEWS | 9 +++
man/nleqslv.Rd | 11 +++
src/dqr1up.f |only
src/lautil.f | 159 +++++++++++++--------------------------------------------
src/nleqslv.c | 4 -
src/nwbrdn.f | 17 +++---
src/nwnleq.f | 26 ---------
src/nwnwtn.f | 4 -
10 files changed, 87 insertions(+), 177 deletions(-)
Path: /cran/updated | permanent link
Title: Multivariate partitioning
Diff between mvpart versions 1.5-0 dated 2012-01-07 and 1.6-0 dated 2012-02-19
More information about mvpart at CRAN
Description: Multivariate regression trees
Author: rpart by Terry M Therneau and Beth Atkinson
Maintainer: Glenn De'ath
Changelog | 7 +-
DESCRIPTION | 17 +++---
MD5 | 22 ++++----
R/plotcp.R | 36 ++++++-------
R/rpart.R | 144 +++++++++++++++++++++++++++----------------------------
R/sub.barplot.R | 22 ++++----
R/trclcomp.R | 4 -
man/cmds.diss.Rd | 29 ++++++-----
man/mvpart.Rd | 39 ++++++++------
man/rpart.Rd | 75 ++++++++++++++--------------
man/scaler.Rd | 7 +-
src/mrt.c | 58 +++++++++++-----------
12 files changed, 236 insertions(+), 224 deletions(-)
Path: /cran/updated | permanent link
Title: Stable isotope analysis
Diff between IsotopeR versions 0.4 dated 2012-01-02 and 0.4.1 dated 2012-02-19
More information about IsotopeR at CRAN
Description: Estimates diet contributions from isotopic sources using
JAGS. Includes estimation of concentration dependence and
measurement error.
Author: Jake Ferguson and Jack Hopkins
Maintainer: Jake Ferguson
IsotopeR-0.4.1/IsotopeR/DESCRIPTION | 10 +-
IsotopeR-0.4.1/IsotopeR/MD5 | 17 ++---
IsotopeR-0.4.1/IsotopeR/NEWS | 4 +
IsotopeR-0.4.1/IsotopeR/R/IsotopeRgui.R | 14 ++--
IsotopeR-0.4.1/IsotopeR/R/Plot_jags.r | 81 +++++++++++++++---------
IsotopeR-0.4.1/IsotopeR/inst/doc/IsotopeR.pdf |binary
IsotopeR-0.4.1/IsotopeR/man/Bi.plots.Rd | 6 +
IsotopeR-0.4.1/IsotopeR/man/IsotopeR-package.Rd | 5 -
IsotopeR-0.4.1/IsotopeR/man/Tri.plots.Rd | 4 -
IsotopeR-0.4/IsotopeR/inst/doc/IsotopeR.dvi |only
10 files changed, 86 insertions(+), 55 deletions(-)
Path: /cran/updated | permanent link
Title: Tools for evaluating collinearity
Diff between perturb versions 2.04 dated 2010-07-26 and 2.05 dated 2012-02-19
More information about perturb at CRAN
Description: "perturb" evaluates collinearity by adding random noise to
selected variables. "colldiag" calculates condition numbers and
variance decomposition proportions to test for collinearity and
uncover its sources.
Author: John Hendrickx
Maintainer: John Hendrickx
perturb-2.04/perturb/data/consumption.dat |only
perturb-2.04/perturb/data/consumption.r |only
perturb-2.05/perturb/DESCRIPTION | 8 +++---
perturb-2.05/perturb/MD5 |only
perturb-2.05/perturb/NAMESPACE |only
perturb-2.05/perturb/NEWS |only
perturb-2.05/perturb/R/colldiag.R | 6 +---
perturb-2.05/perturb/data/consumption.rda |only
perturb-2.05/perturb/data/consumption.tab.gz |only
perturb-2.05/perturb/man/colldiag.Rd | 34 +++++++++++++++++++++++----
perturb-2.05/perturb/man/consumption.Rd | 6 ++--
perturb-2.05/perturb/man/perturb.Rd | 10 +++----
perturb-2.05/perturb/man/reclassify.Rd | 10 ++-----
13 files changed, 46 insertions(+), 28 deletions(-)
Path: /cran/updated | permanent link
Title: fastVAR
Diff between fastVAR versions 1.2 dated 2011-05-10 and 1.2.1 dated 2012-02-19
More information about fastVAR at CRAN
Description: This package is designed for time series data. Fits
Vector Autoregressive models and Vector Autoregressive models
with Exogenous Inputs. For speedup, fastVAR can use multiple
cpu cores to calculate the estimates. For very large systems,
fastVAR uses Lasso penalty to return very sparse coefficient
matrices. Regression diagnostics can be used to compare
models, and prediction functions can be used to calculate the
n-step ahead prediction. Faster implementations in C coming
soon.
Author: Jeffrey Wong
Maintainer:
fastVAR-1.2.1/fastVAR/DESCRIPTION | 27 ++++-----
fastVAR-1.2.1/fastVAR/MD5 |only
fastVAR-1.2.1/fastVAR/R/fastVAR.R | 64 +++++++++++++---------
fastVAR-1.2.1/fastVAR/R/fastVARX.R | 76 +++++++++++++++------------
fastVAR-1.2.1/fastVAR/man/VARXlasso.Rd | 6 +-
fastVAR-1.2.1/fastVAR/man/VARlasso.Rd | 6 +-
fastVAR-1.2.1/fastVAR/man/fastVAR-package.Rd | 2
fastVAR-1.2/fastVAR/R/clusterVARX.R |only
fastVAR-1.2/fastVAR/man/gather.VARXlasso.Rd |only
fastVAR-1.2/fastVAR/man/map.VARXlasso.Rd |only
fastVAR-1.2/fastVAR/man/reduce.VARXlasso.Rd |only
11 files changed, 107 insertions(+), 74 deletions(-)
Path: /cran/updated | permanent link
Title: Format a number to a string with SI prefix
Diff between sitools versions 1.2 dated 2012-01-23 and 1.3 dated 2012-02-19
More information about sitools at CRAN
Description: Format a number (or a list of numbers) to a string (or a
list of strings) with SI prefix. Use SI prefixes as constants
like (4 * milli)^2
Author: Jonas Stein, Ben Tupper
Maintainer: Jonas Stein
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
man/sistring.Rd | 21 +++++++++++++++++++--
3 files changed, 25 insertions(+), 8 deletions(-)
Path: /cran/updated | permanent link
More information about spcov at CRAN
Path: /cran/new | permanent link
Title: Interface to PLoS Journals API methods
Diff between rplos versions 0.0-1 dated 2011-12-14 and 0.0-5 dated 2012-02-19
More information about rplos at CRAN
Description: A programmatic interface to the Web Service methods
provided by the Public Library of Science journals.
Author: Scott Chamberlain, Carl Boettiger
Maintainer: Scott Chamberlain
rplos-0.0-1/rplos/R/almpub.R |only
rplos-0.0-1/rplos/README |only
rplos-0.0-1/rplos/man/almpub.Rd |only
rplos-0.0-5/rplos/DESCRIPTION | 33 +++++++++++------------
rplos-0.0-5/rplos/MD5 | 33 +++++++++++++----------
rplos-0.0-5/rplos/NAMESPACE | 4 ++
rplos-0.0-5/rplos/NEWS |only
rplos-0.0-5/rplos/R/almdatepub.R |only
rplos-0.0-5/rplos/R/almdateupdated.R |only
rplos-0.0-5/rplos/R/almplosallviews.R | 29 ++++++++++++++------
rplos-0.0-5/rplos/R/almtotcites.R | 5 ++-
rplos-0.0-5/rplos/R/crossref.R | 10 +++++--
rplos-0.0-5/rplos/R/journalnamekey.R |only
rplos-0.0-5/rplos/R/plosabstract.R | 2 -
rplos-0.0-5/rplos/R/searchplos.R | 43 +++++++++++++++++++++++++------
rplos-0.0-5/rplos/README.md |only
rplos-0.0-5/rplos/man/almdatepub.Rd |only
rplos-0.0-5/rplos/man/almdateupdated.Rd |only
rplos-0.0-5/rplos/man/almplosallviews.Rd | 14 ++++++++--
rplos-0.0-5/rplos/man/crossref.Rd | 7 ++++-
rplos-0.0-5/rplos/man/journalnamekey.Rd |only
rplos-0.0-5/rplos/man/plosabstract.Rd | 2 -
rplos-0.0-5/rplos/man/searchplos.Rd | 26 ++++++++++++++----
23 files changed, 145 insertions(+), 63 deletions(-)
Path: /cran/updated | permanent link
Title: Lasso and elastic-net regularized generalized linear models
Diff between glmnet versions 1.7.1 dated 2011-09-23 and 1.7.3 dated 2012-02-19
More information about glmnet at CRAN
Description: Extremely efficient procedures for fitting the entire
lasso or elastic-net regularization path for linear regression,
logistic and multinomial regression models, poisson regression
and the Cox model. The algorithm uses cyclical coordinate
descent in a pathwise fashion, as described in the paper listed
below.
Author: Jerome Friedman, Trevor Hastie, Rob Tibshirani
Maintainer: Trevor Hastie
glmnet-1.7.1/glmnet/R/softmax.R |only
glmnet-1.7.1/glmnet/src/newGLMnet_f.f90 |only
glmnet-1.7.3/glmnet/DESCRIPTION | 9 ++++---
glmnet-1.7.3/glmnet/MD5 | 34 ++++++++++++++--------------
glmnet-1.7.3/glmnet/NAMESPACE | 5 +---
glmnet-1.7.3/glmnet/R/cv.glmnet.R | 1
glmnet-1.7.3/glmnet/R/cv.lognet.R | 4 +--
glmnet-1.7.3/glmnet/R/cv.multnet.R | 2 -
glmnet-1.7.3/glmnet/R/getcoef.multinomial.R | 2 -
glmnet-1.7.3/glmnet/R/getmin.R | 2 -
glmnet-1.7.3/glmnet/R/glmnet.R | 9 +++++++
glmnet-1.7.3/glmnet/R/glmnet_softmax.R |only
glmnet-1.7.3/glmnet/R/nonzeroCoef.R | 19 +++++++++++----
glmnet-1.7.3/glmnet/R/plotCoef.R | 12 ++++++++-
glmnet-1.7.3/glmnet/R/predict.multnet.R | 4 +--
glmnet-1.7.3/glmnet/inst/doc/Coxnet.pdf |binary
glmnet-1.7.3/glmnet/man/deviance.glmnet.Rd | 6 ++--
glmnet-1.7.3/glmnet/man/glmnet-internal.Rd | 6 ++--
glmnet-1.7.3/glmnet/man/glmnet.Rd | 33 +++++++++++++++++----------
glmnet-1.7.3/glmnet/src/newGLMnet.f90 |only
20 files changed, 92 insertions(+), 56 deletions(-)
Path: /cran/updated | permanent link
Title: CorrSieve
Diff between corrsieve versions 1.6-5 dated 2011-08-23 and 1.6-6 dated 2012-02-19
More information about corrsieve at CRAN
Description: Statistical summary of Structure output.
Author: Michael G. Campana
Maintainer: Michael G. Campana
DESCRIPTION | 8 ++++----
MD5 | 5 +++--
NAMESPACE |only
R/corrsieve.R | 3 ++-
4 files changed, 9 insertions(+), 7 deletions(-)
Path: /cran/updated | permanent link
Title: R Emulation of Berkeley Earth Surface Temperature
Diff between BerkeleyEarth versions 1.1 dated 2012-02-18 and 1.3 dated 2012-02-19
More information about BerkeleyEarth at CRAN
Description: A selection of functioned designed to emulate the Berkeley
Earth Surface Temperature Project. Version 1.2 includes only
those function to import data.
Author: Steven Mosher
Maintainer: Steven Mosher
DESCRIPTION | 10 +++++-----
MD5 | 14 +++++++++-----
R/BerkeleyUrls.R |only
R/SetUp.R | 28 +++++++---------------------
R/downloadBerkeley.R |only
R/readBerkeleyTemp.R | 24 ++++++++++++++++++------
man/BerkeleyEarth-package.Rd | 6 +++---
man/BerkeleyUrls.Rd |only
man/downloadBerkeley.Rd |only
man/readBerkeleyTemp.Rd | 18 +++++++++++++-----
10 files changed, 55 insertions(+), 45 deletions(-)
Path: /cran/updated | permanent link