Title: Models for Data from Unmarked Animals
Diff between unmarked versions 0.9-6 dated 2012-03-23 and 0.9-7 dated 2012-03-29
Description: Unmarked fits hierarchical models of animal abundance and
occurrence to data collected using survey methods such as point
counts, site occupancy sampling, distance sampling, removal
sampling, and double observer sampling. Parameters governing
the state and observation processes can be modeled as functions
of covariates.
Author: Ian Fiske, Richard Chandler, Andy Royle, Marc Kery
Maintainer: Richard Chandler
unmarked-0.9-6/unmarked/data/crossbill.rda |only
unmarked-0.9-6/unmarked/man/crossbill.Rd |only
unmarked-0.9-7/unmarked/DESCRIPTION | 8 -
unmarked-0.9-7/unmarked/MD5 | 31 ++---
unmarked-0.9-7/unmarked/R/utils.R | 6 -
unmarked-0.9-7/unmarked/inst/doc/cap-recap.pdf |binary
unmarked-0.9-7/unmarked/inst/doc/colext.Rnw | 78 +++++++++++--
unmarked-0.9-7/unmarked/inst/doc/colext.pdf |binary
unmarked-0.9-7/unmarked/inst/doc/distsamp.pdf |binary
unmarked-0.9-7/unmarked/inst/doc/spp-dist.Rnw | 90 +++++++++++++--
unmarked-0.9-7/unmarked/inst/doc/spp-dist.pdf |binary
unmarked-0.9-7/unmarked/inst/doc/unmarked.pdf |binary
unmarked-0.9-7/unmarked/inst/unitTests/runit.gdistsamp.R | 65 ++++++----
unmarked-0.9-7/unmarked/man/unmarked-package.Rd | 2
unmarked-0.9-7/unmarked/vignettes/colext-cov.pdf |only
unmarked-0.9-7/unmarked/vignettes/colext-yearlysim.pdf |only
unmarked-0.9-7/unmarked/vignettes/colext.Rnw | 78 +++++++++++--
unmarked-0.9-7/unmarked/vignettes/spp-dist-psi1.pdf |only
unmarked-0.9-7/unmarked/vignettes/spp-dist.Rnw | 90 +++++++++++++--
19 files changed, 356 insertions(+), 92 deletions(-)
Title: Sets, Generalized Sets, Customizable Sets and Intervals
Diff between sets versions 1.0-8 dated 2011-04-26 and 1.0-9 dated 2012-03-29
Description: Data structures and basic operations for ordinary sets,
generalizations such as fuzzy sets, multisets, and fuzzy
multisets, customizable sets, and intervals.
Author: David Meyer and Kurt Hornik (with contributions by Christian
Buchta)
Maintainer: David Meyer
sets-1.0-8/sets/inst/doc/sets.bib |only
sets-1.0-9/sets/DESCRIPTION | 8 ++++----
sets-1.0-9/sets/MD5 |only
sets-1.0-9/sets/R/fuzzyfuns.R | 4 ++--
sets-1.0-9/sets/R/gset.R | 2 +-
sets-1.0-9/sets/R/utilities.R | 1 +
sets-1.0-9/sets/data/fuzzy_docs.rda |binary
sets-1.0-9/sets/inst/NEWS.Rd |only
sets-1.0-9/sets/inst/doc/sets.pdf |binary
sets-1.0-9/sets/man/interval.Rd | 21 ++++++++++++++++++---
sets-1.0-9/sets/vignettes |only
11 files changed, 26 insertions(+), 10 deletions(-)
Title: Harrell Miscellaneous
Diff between Hmisc versions 3.9-2 dated 2012-02-10 and 3.9-3 dated 2012-03-29
Description: The Hmisc library contains many functions useful for data
analysis, high-level graphics, utility operations, functions
for computing sample size and power, importing datasets,
imputing missing values, advanced table making, variable
clustering, character string manipulation, conversion of S
objects to LaTeX code, and recoding variables. Please submit
bug reports to 'http://biostat.mc.vanderbilt.edu/trac/Hmisc'.
Author: Frank E Harrell Jr
Maintainer: Charles Dupont
DESCRIPTION | 8 ++++----
MD5 | 34 +++++++++++++++++-----------------
R/aregImpute.s | 2 +-
R/dataRep.s | 2 +-
R/describe.s | 2 +-
R/ecdf.s | 4 ++--
R/labcurve.s | 4 ++--
R/plsmo.s | 2 +-
R/ps.slide.s | 10 +++++-----
R/rm.boot.s | 6 +++---
R/sedit.s | 4 +++-
R/spower.s | 18 +++++++++---------
R/summary.formula.s | 10 +++++-----
R/symbol.freq.s | 16 ++++++++--------
R/transace.s | 4 ++--
R/transcan.s | 4 ++--
R/xYplot.s | 2 +-
man/summary.formula.Rd | 15 ++++++++++++---
18 files changed, 79 insertions(+), 68 deletions(-)
Title: Time Series Database Interface extentions for SQLite
Diff between TSSQLite versions 2011.11-1 dated 2011-11-02 and 2012.3-1 dated 2012-03-29
Description: TSSQLite provides a SQLite interface for TSdbi.
Author: Paul Gilbert
Maintainer: Paul Gilbert
TSSQLite-2011.11-1/TSSQLite/inst/doc/Guide.Stex |only
TSSQLite-2012.3-1/TSSQLite/DESCRIPTION | 8 +++-----
TSSQLite-2012.3-1/TSSQLite/MD5 | 10 +++++-----
TSSQLite-2012.3-1/TSSQLite/NEWS | 4 ++++
TSSQLite-2012.3-1/TSSQLite/R/TSdbiMethods.R | 5 ++++-
TSSQLite-2012.3-1/TSSQLite/inst/doc/Guide.pdf |binary
TSSQLite-2012.3-1/TSSQLite/vignettes |only
7 files changed, 16 insertions(+), 11 deletions(-)
Title: Time Series Database Interface extensions for PostgreSQL
Diff between TSPostgreSQL versions 2011.11-1 dated 2011-11-02 and 2012.3-1 dated 2012-03-29
Description: TSPostgreSQL provides a PostgreSQL interface for TSdbi.
Author: Paul Gilbert
Maintainer: Paul Gilbert
TSPostgreSQL-2011.11-1/TSPostgreSQL/inst/doc/Guide.Stex |only
TSPostgreSQL-2012.3-1/TSPostgreSQL/DESCRIPTION | 8 +++-----
TSPostgreSQL-2012.3-1/TSPostgreSQL/MD5 | 11 ++++++-----
TSPostgreSQL-2012.3-1/TSPostgreSQL/NEWS | 5 +++++
TSPostgreSQL-2012.3-1/TSPostgreSQL/R/TSdbiMethods.R | 5 ++++-
TSPostgreSQL-2012.3-1/TSPostgreSQL/README |only
TSPostgreSQL-2012.3-1/TSPostgreSQL/inst/doc/Guide.pdf |binary
TSPostgreSQL-2012.3-1/TSPostgreSQL/vignettes |only
8 files changed, 18 insertions(+), 11 deletions(-)
Title: Time Series Database Interface extensions for ODBC
Diff between TSodbc versions 2011.11-1 dated 2011-11-02 and 2012.3-1 dated 2012-03-29
Description: TSodbc provides an ODBC interface for TSdbi.
Author: Paul Gilbert
Maintainer: Paul Gilbert
TSodbc-2011.11-1/TSodbc/inst/doc/Guide.Stex |only
TSodbc-2012.3-1/TSodbc/DESCRIPTION | 8 +++-----
TSodbc-2012.3-1/TSodbc/MD5 | 10 +++++-----
TSodbc-2012.3-1/TSodbc/NEWS | 4 ++++
TSodbc-2012.3-1/TSodbc/R/TSdbiMethods.R | 2 +-
TSodbc-2012.3-1/TSodbc/inst/doc/Guide.pdf |binary
TSodbc-2012.3-1/TSodbc/vignettes |only
7 files changed, 13 insertions(+), 11 deletions(-)
Title: Time Series Database Interface extensions for MySQL
Diff between TSMySQL versions 2011.11-1 dated 2011-11-02 and 2012.3-1 dated 2012-03-29
Description: TSMySQL provides a MySQL interface for TSdbi.
Author: Paul Gilbert
Maintainer: Paul Gilbert
TSMySQL-2011.11-1/TSMySQL/inst/doc/Guide.Stex |only
TSMySQL-2012.3-1/TSMySQL/DESCRIPTION | 8 +++-----
TSMySQL-2012.3-1/TSMySQL/MD5 | 10 +++++-----
TSMySQL-2012.3-1/TSMySQL/NEWS | 5 +++++
TSMySQL-2012.3-1/TSMySQL/R/TSdbiMethods.R | 5 ++++-
TSMySQL-2012.3-1/TSMySQL/inst/doc/Guide.pdf |binary
TSMySQL-2012.3-1/TSMySQL/vignettes |only
7 files changed, 17 insertions(+), 11 deletions(-)
Title: Time Series Database Interface
Diff between TSdbi versions 2011.11-2 dated 2011-11-28 and 2012.3-1 dated 2012-03-29
Description: TSdbi provides a common interface to time series
databases. The objective is to define a standard interface so
users can retrieve time series data from various sources with a
simple, common, set of commands, and so programs can be written
to be portable with respect to the data source. The SQL
implementations also provide a database table design, so users
needing to set up a time series database have a reasonably
complete way to do this easily. The interface provides for a
variety of options with respect to the representation of time
series in R. There is also a (not yet well tested) mechanism to
handle multilingual data documentation.
Author: Paul Gilbert
Maintainer: Paul Gilbert
TSdbi-2011.11-2/TSdbi/LICENSE |only
TSdbi-2012.3-1/TSdbi/DESCRIPTION | 32 ++++++++++++++++----------------
TSdbi-2012.3-1/TSdbi/MD5 | 5 ++---
TSdbi-2012.3-1/TSdbi/NEWS | 4 ++++
4 files changed, 22 insertions(+), 19 deletions(-)
Title: Treemap visualization
Diff between treemap versions 0.11 dated 2012-02-27 and 1.0-3 dated 2012-03-29
Description: A treemap is a space-filling visualization of hierarchical
structures. With this package different kind of treemaps can be
generated, such as comparison treemaps and density treemaps.
Small multiples are also supported.
Author: Martijn Tennekes
Maintainer: Martijn Tennekes
treemap-0.11/treemap/R/fill2col.R |only
treemap-1.0-3/treemap/DESCRIPTION | 23 -
treemap-1.0-3/treemap/MD5 | 35 -
treemap-1.0-3/treemap/NEWS | 3
treemap-1.0-3/treemap/R/baseTreemap.R | 291 +++++++++-----
treemap-1.0-3/treemap/R/comp2col.R | 48 ++
treemap-1.0-3/treemap/R/createRec.R | 28 -
treemap-1.0-3/treemap/R/fixed2col.R | 4
treemap-1.0-3/treemap/R/index2col.R |only
treemap-1.0-3/treemap/R/overlap.R | 6
treemap-1.0-3/treemap/R/pivotSize.R | 116 +++--
treemap-1.0-3/treemap/R/pkg.R | 12
treemap-1.0-3/treemap/R/squarified.R |only
treemap-1.0-3/treemap/R/str2rect.R | 43 --
treemap-1.0-3/treemap/R/tmLocate.R | 12
treemap-1.0-3/treemap/R/tmPlot.R | 531 +++++++++++++++------------
treemap-1.0-3/treemap/R/value2col.R | 1
treemap-1.0-3/treemap/man/tmLocate.Rd | 8
treemap-1.0-3/treemap/man/tmPlot.Rd | 320 ++++++++++++----
treemap-1.0-3/treemap/man/treemap-package.Rd | 41 +-
20 files changed, 960 insertions(+), 562 deletions(-)
Title: Using GUIs to help teach statistics to non-statistics students
Diff between ResearchMethods versions 1.2 dated 2010-08-12 and 1.4 dated 2012-03-29
More information about ResearchMethods at CRAN
Description:
Author: Mohamed Abdolell and Sam Stewart
Maintainer: Sam Stewart
ResearchMethods-1.2/ResearchMethods/data/MFSV.tab |only
ResearchMethods-1.2/ResearchMethods/data/agpop.tab |only
ResearchMethods-1.4/ResearchMethods/DESCRIPTION | 8
ResearchMethods-1.4/ResearchMethods/MD5 |only
ResearchMethods-1.4/ResearchMethods/NAMESPACE |only
ResearchMethods-1.4/ResearchMethods/R/BlandAltman.R | 48
ResearchMethods-1.4/ResearchMethods/R/bootSequence.R | 30
ResearchMethods-1.4/ResearchMethods/R/bootSingle.R | 34
ResearchMethods-1.4/ResearchMethods/R/caseRatio.R | 28
ResearchMethods-1.4/ResearchMethods/R/clt.R | 16
ResearchMethods-1.4/ResearchMethods/R/confInt.R | 52
ResearchMethods-1.4/ResearchMethods/R/histSample.R | 38
ResearchMethods-1.4/ResearchMethods/R/minimAllocGUI.R | 94 -
ResearchMethods-1.4/ResearchMethods/R/multHypothesis.R | 18
ResearchMethods-1.4/ResearchMethods/R/powerDemo.R | 36
ResearchMethods-1.4/ResearchMethods/R/ratioCompare.R | 66
ResearchMethods-1.4/ResearchMethods/R/rhoRange.R | 66
ResearchMethods-1.4/ResearchMethods/R/rhoScale.R | 52
ResearchMethods-1.4/ResearchMethods/R/rocCurve.R | 60
ResearchMethods-1.4/ResearchMethods/R/sampleAssign.R | 32
ResearchMethods-1.4/ResearchMethods/R/sampleSchemes.R | 122 -
ResearchMethods-1.4/ResearchMethods/R/sumSquares.R | 38
ResearchMethods-1.4/ResearchMethods/R/unix/menuSampleSize.R | 734 +++++-----
ResearchMethods-1.4/ResearchMethods/R/windows/menuSampleSize.R | 734 +++++-----
ResearchMethods-1.4/ResearchMethods/data/MFSV.tab.gz |only
ResearchMethods-1.4/ResearchMethods/data/agpop.tab.gz |only
ResearchMethods-1.4/ResearchMethods/inst/doc/functionList.pdf |binary
ResearchMethods-1.4/ResearchMethods/man/BlandAltman.Rd | 3
ResearchMethods-1.4/ResearchMethods/man/agpop.Rd | 4
ResearchMethods-1.4/ResearchMethods/man/myHist.Rd | 11
ResearchMethods-1.4/ResearchMethods/man/ratioCompare.Rd | 5
ResearchMethods-1.4/ResearchMethods/man/sampleAssign.Rd | 1
32 files changed, 1164 insertions(+), 1166 deletions(-)
Permanent link
Title: QTL Bayesian Interval Mapping
Diff between qtlbim versions 2.0.1 dated 2012-03-22 and 2.0.5 dated 2012-03-29
Description: Functions for model selection for genetic architecture.
Author: Brian S. Yandell
Maintainer: Brian S. Yandell
DESCRIPTION | 8 ++++----
MD5 | 23 +++++++++++++----------
data/Bnapus.RData |binary
data/fisch.RData |binary
data/qbExample.RData |binary
data/qbHyper.RData |binary
data/qbSimEpi.RData |binary
data/qbSimMain.RData |binary
data/vern.RData |binary
inst/doc/prototype.qtl.hyper.slides.pdf |binary
inst/doc/qtlbim.pdf |binary
vignettes |only
12 files changed, 17 insertions(+), 14 deletions(-)
Title: Tools for Multivariate Nonparametrics
Diff between ICSNP versions 1.0-8 dated 2012-02-23 and 1.0-9 dated 2012-03-29
Description: Tools for multivariate nonparametrics, as location tests
based on marginal ranks, spatial median and spatial signs
computation, Hotelling's T-test, estimates of shape
Author: Klaus Nordhausen, Seija Sirkia, Hannu Oja, David E. Tyler
Maintainer: Klaus Nordhausen
DESCRIPTION | 8 ++--
MD5 | 16 ++++-----
R/symm.huber.R | 22 ++++++++-----
data/pulmonary.rda |binary
inst/ChangeLog | 5 +++
man/HotellingsT.Rd | 3 +
man/ICSNP-package.Rd | 4 +-
man/symm.huber.Rd | 10 +++---
src/icsnp.cpp | 82 +++++++++++++++++++++++++++++++++++++++++++++++++++
9 files changed, 122 insertions(+), 28 deletions(-)
Title: Fitting High Dimensional Linear Models
Diff between hdlm versions 0.2 dated 2011-09-23 and 1.0 dated 2012-03-29
Description: Mimics the lm function found in the recommended package
stats to fit high dimensional regression models with point
estimates, standard errors, and p-values. Methods for printing
and summarizing the results are given.
Author: Taylor B. Arnold
Maintainer: Taylor B. Arnold
hdlm-0.2/hdlm/R/dselector.R |only
hdlm-0.2/hdlm/R/rootlasso.R |only
hdlm-1.0/hdlm/DESCRIPTION | 16 -
hdlm-1.0/hdlm/MD5 | 45 +++
hdlm-1.0/hdlm/NAMESPACE |only
hdlm-1.0/hdlm/R/anova.hdlm.R |only
hdlm-1.0/hdlm/R/bayes.hdglm.fit.R |only
hdlm-1.0/hdlm/R/bayes.hdlm.fit.R |only
hdlm-1.0/hdlm/R/bayesianLatentFit.R |only
hdlm-1.0/hdlm/R/case.names.hdlm.R |only
hdlm-1.0/hdlm/R/deviance.hdlm.R |only
hdlm-1.0/hdlm/R/df.residual.hdlm.R |only
hdlm-1.0/hdlm/R/effects.hdlm.R |only
hdlm-1.0/hdlm/R/family.hdlm.R |only
hdlm-1.0/hdlm/R/formula.hdlm.R |only
hdlm-1.0/hdlm/R/hdglm.R |only
hdlm-1.0/hdlm/R/hdlm.R | 409 +++++++++-------------------------
hdlm-1.0/hdlm/R/hdlm.fit.R | 309 ++++++++++++++-----------
hdlm-1.0/hdlm/R/labels.hdlm.R |only
hdlm-1.0/hdlm/R/mod.cv.glmnet.R |only
hdlm-1.0/hdlm/R/model.frame.hdlm.R |only
hdlm-1.0/hdlm/R/model.matrix.hdlm.R |only
hdlm-1.0/hdlm/R/plot.hdlm.R |only
hdlm-1.0/hdlm/R/predict.hdglm.R |only
hdlm-1.0/hdlm/R/predict.hdlm.R |only
hdlm-1.0/hdlm/R/print.hdlm.R |only
hdlm-1.0/hdlm/R/print.summary.hdglm.R |only
hdlm-1.0/hdlm/R/print.summary.hdlm.R |only
hdlm-1.0/hdlm/R/qr.hdlm.R |only
hdlm-1.0/hdlm/R/residuals.hdlm.R |only
hdlm-1.0/hdlm/R/simulate.hdlm.R |only
hdlm-1.0/hdlm/R/summary.hdglm.R |only
hdlm-1.0/hdlm/R/summary.hdlm.R |only
hdlm-1.0/hdlm/R/variable.names.hdlm.R |only
hdlm-1.0/hdlm/man/hdglm.Rd |only
hdlm-1.0/hdlm/man/hdlm.Rd | 237 ++++++++++---------
hdlm-1.0/hdlm/man/summary.hdlm.Rd |only
hdlm-1.0/hdlm/src |only
38 files changed, 461 insertions(+), 555 deletions(-)
Title: Likelihood-based Boosting for Generalized mixed models
Diff between GMMBoost versions 1.0.1 dated 2011-11-21 and 1.0.2 dated 2012-03-29
Description: Likelihood-based Boosting for Generalized mixed models
Author: Andreas Groll
Maintainer: Andreas Groll
GMMBoost-1.0.1/GMMBoost/man/GMMBoost.Rd |only
GMMBoost-1.0.2/GMMBoost/DESCRIPTION | 10 ++---
GMMBoost-1.0.2/GMMBoost/MD5 | 16 ++++----
GMMBoost-1.0.2/GMMBoost/R/OrdinalBoost.r | 2 -
GMMBoost-1.0.2/GMMBoost/R/bGAMM.r | 2 -
GMMBoost-1.0.2/GMMBoost/R/bGLMM.r | 46 ++++++++++++++++++++----
GMMBoost-1.0.2/GMMBoost/man/GMMBoost-package.Rd |only
GMMBoost-1.0.2/GMMBoost/man/OrdinalBoost.rd | 3 +
GMMBoost-1.0.2/GMMBoost/man/bGAMM.rd | 2 -
GMMBoost-1.0.2/GMMBoost/man/soccer.Rd | 5 ++
10 files changed, 62 insertions(+), 24 deletions(-)
Title: Variable selection for generalized linear mixed models by
L1-penalized estimation
Diff between glmmLasso versions 1.0.0 dated 2011-10-27 and 1.0.1 dated 2012-03-29
Description: Variable selection for generalized linear mixed models by
L1-penalized estimation
Author: Andreas Groll
Maintainer: Andreas Groll
DESCRIPTION | 10 +++---
MD5 | 10 +++---
R/glmmLasso.r | 80 ++++++++++++++++++++++++++++++++++++++++--------
demo/glmmLasso-soccer.r | 64 ++++++++++++++++++++++++++++++--------
man/glmmLasso.rd | 12 +++++--
man/soccer.Rd | 5 ++-
6 files changed, 142 insertions(+), 39 deletions(-)
Title: Generic Reproducible Parallel Backend for foreach Loops
Diff between doRNG versions 1.2.1 dated 2012-03-09 and 1.2.2 dated 2012-03-29
Description: This package provides functions to perform reproducible
parallel foreach loops, using independent random streams as
generated by L'Ecuyer's combined multiple-recursive generator
[L'Ecuyer (1999)]. It enables to easily convert standard
%dopar% loops into fully reproducible loops, independently of
the number of workers, the task scheduling strategy, or the
chosen parallel environment and associated foreach backend.
Author: Renaud Gaujoux
Maintainer: Renaud Gaujoux
doRNG-1.2.1/doRNG/man/CMRGseed.Rd |only
doRNG-1.2.2/doRNG/DESCRIPTION | 6
doRNG-1.2.2/doRNG/MD5 | 32 +-
doRNG-1.2.2/doRNG/NAMESPACE | 5
doRNG-1.2.2/doRNG/NEWS | 18 +
doRNG-1.2.2/doRNG/R/doRNG-package.R | 43 ++
doRNG-1.2.2/doRNG/R/doRNG.R | 345 ++++++++++--------------
doRNG-1.2.2/doRNG/inst/doc/doRNG-unitTests.Rnw |only
doRNG-1.2.2/doRNG/inst/doc/doRNG-unitTests.pdf |only
doRNG-1.2.2/doRNG/inst/doc/doRNG.pdf |binary
doRNG-1.2.2/doRNG/inst/unitTests |only
doRNG-1.2.2/doRNG/man/RNGseq.Rd | 21 +
doRNG-1.2.2/doRNG/man/doRNG-package.Rd | 41 ++
doRNG-1.2.2/doRNG/man/doRNG.Rd | 94 +-----
doRNG-1.2.2/doRNG/man/doRNGseed.Rd | 46 +--
doRNG-1.2.2/doRNG/vignettes/Makefile | 16 -
doRNG-1.2.2/doRNG/vignettes/Rpackages.bib | 16 -
doRNG-1.2.2/doRNG/vignettes/doRNG-unitTests.Rnw |only
doRNG-1.2.2/doRNG/vignettes/src/doRNG.Rnw | 158 +++++++++-
doRNG-1.2.2/doRNG/vignettes/unitTests |only
20 files changed, 489 insertions(+), 352 deletions(-)
Title: Gaussian Mixture Modeling algorithms. Including the belief-based
mixture modeling.
Diff between bgmm versions 1.4 dated 2011-12-07 and 1.5 dated 2012-03-29
Description: The bgmm package implements two partially supervised
mixture modeling methods: soft-label and belief-based modeling.
For completeness, we equipped the package also with the
functionality of unsupervised, semi- and fully supervised
mixture modeling. The package can be applied also to selection
of the best-fitting from a set of models with different
component numbers or constraints on their structures.
Author: Przemyslaw Biecek \& Ewa Szczurek
Maintainer: Przemyslaw Biecek
DESCRIPTION | 20 ++++++++++++++------
MD5 | 34 +++++++++++++++++-----------------
R/plot.bgmm.r | 18 ++++++++++--------
inst/CITATION | 39 +++++++++++++++++++++------------------
man/DEprobs.Rd | 2 +-
man/bgmm-package.Rd | 3 +--
man/chooseModels.Rd | 2 +-
man/crossval.Rd | 2 +-
man/getModelStructure.Rd | 2 +-
man/init.model.params.Rd | 2 +-
man/mModel.Rd | 2 +-
man/mModelList.Rd | 2 +-
man/plot.mModel.Rd | 4 ++--
man/plot.mModelList.Rd | 4 ++--
man/plotGIC.Rd | 2 +-
man/predict.mModel.Rd | 4 ++--
man/simulateData.Rd | 2 +-
man/tools.Rd | 4 ++--
18 files changed, 80 insertions(+), 68 deletions(-)
Title: Functions for analysis of method comparison studies.
Diff between MethComp versions 1.3 dated 2011-02-18 and 1.15 dated 2012-03-29
Description: Methods (standard and advanced) for comparison of
measurement methods.
Author: Bendix Carstensen, Lyle Gurrin, Claus Ekstrom
Maintainer: Bendix Carstensen
MethComp-1.15/MethComp/CHANGES | 140 ++++
MethComp-1.15/MethComp/DESCRIPTION | 18
MethComp-1.15/MethComp/MD5 |only
MethComp-1.15/MethComp/NAMESPACE | 9
MethComp-1.15/MethComp/R/AltReg.R | 18
MethComp-1.15/MethComp/R/BA.est.R | 60 +-
MethComp-1.15/MethComp/R/BA.plot.r |only
MethComp-1.15/MethComp/R/BlandAltman.R | 653 ++++++++++++----------
MethComp-1.15/MethComp/R/DA.reg.r | 121 ++--
MethComp-1.15/MethComp/R/FL.R | 2
MethComp-1.15/MethComp/R/MCmcmc.R | 70 +-
MethComp-1.15/MethComp/R/Meth.r | 36 -
MethComp-1.15/MethComp/R/MethComp.r | 343 ++++++++---
MethComp-1.15/MethComp/R/VC.est.R | 205 ------
MethComp-1.15/MethComp/R/VC.est.fixed.R |only
MethComp-1.15/MethComp/R/VC.est.random.R |only
MethComp-1.15/MethComp/R/check.MCmcmc.R | 2
MethComp-1.15/MethComp/R/pbreg.R | 54 -
MethComp-1.15/MethComp/R/plot.Meth.R | 30 -
MethComp-1.15/MethComp/R/summary.MCmcmc.R | 6
MethComp-1.15/MethComp/R/to.wide.R | 28
MethComp-1.15/MethComp/data/Ancona.rda |only
MethComp-1.15/MethComp/data/CardOutput.rda |only
MethComp-1.15/MethComp/data/Enzyme.rda |only
MethComp-1.15/MethComp/data/PEFR.rda |only
MethComp-1.15/MethComp/data/VitCap.rda |only
MethComp-1.15/MethComp/data/cardiac.rda |only
MethComp-1.15/MethComp/data/datalist |only
MethComp-1.15/MethComp/data/fat.rda |only
MethComp-1.15/MethComp/data/glucose.rda |only
MethComp-1.15/MethComp/data/hba.MC.rda |only
MethComp-1.15/MethComp/data/hba1c.rda |only
MethComp-1.15/MethComp/data/milk.rda |only
MethComp-1.15/MethComp/data/ox.MC.rda |only
MethComp-1.15/MethComp/data/ox.rda |only
MethComp-1.15/MethComp/data/plvol.rda |only
MethComp-1.15/MethComp/data/rainman.rda |only
MethComp-1.15/MethComp/data/sbp.MC.rda |only
MethComp-1.15/MethComp/data/sbp.rda |only
MethComp-1.15/MethComp/data/scint.rda |only
MethComp-1.15/MethComp/inst/doc/Deming.pdf |binary
MethComp-1.15/MethComp/inst/doc/introMethComp.pdf |binary
MethComp-1.15/MethComp/man/Ancona.Rd |only
MethComp-1.15/MethComp/man/BA.est.Rd | 56 +
MethComp-1.15/MethComp/man/BA.plot.Rd |only
MethComp-1.15/MethComp/man/BlandAltman.Rd | 27
MethComp-1.15/MethComp/man/DA.reg.Rd | 124 +++-
MethComp-1.15/MethComp/man/Deming.Rd | 8
MethComp-1.15/MethComp/man/Enzyme.Rd | 2
MethComp-1.15/MethComp/man/MCmcmc.Rd | 16
MethComp-1.15/MethComp/man/Meth.Rd | 41 -
MethComp-1.15/MethComp/man/MethComp.Rd | 103 ++-
MethComp-1.15/MethComp/man/hba.MC.Rd |only
MethComp-1.15/MethComp/man/pbreg.Rd | 53 -
MethComp-1.15/MethComp/man/plot.MCmcmc.Rd | 18
MethComp-1.15/MethComp/man/plot.VarComp.rd | 28
MethComp-1.15/MethComp/man/plotpbreg.Rd | 37 -
MethComp-1.15/MethComp/man/rainman.Rd |only
MethComp-1.15/MethComp/man/sbp.MC.Rd | 3
MethComp-1.15/MethComp/man/to.wide.Rd | 8
MethComp-1.15/MethComp/vignettes |only
MethComp-1.3/MethComp/2do |only
MethComp-1.3/MethComp/R/BA.plot.R |only
MethComp-1.3/MethComp/data/CardOutput.R |only
MethComp-1.3/MethComp/data/Enzyme.r |only
MethComp-1.3/MethComp/data/PEFR.R |only
MethComp-1.3/MethComp/data/VitCap.r |only
MethComp-1.3/MethComp/data/cardiac.R |only
MethComp-1.3/MethComp/data/fat.R |only
MethComp-1.3/MethComp/data/glucose.R |only
MethComp-1.3/MethComp/data/hba1c.R |only
MethComp-1.3/MethComp/data/milk.R |only
MethComp-1.3/MethComp/data/ox.MC.r |only
MethComp-1.3/MethComp/data/ox.R |only
MethComp-1.3/MethComp/data/plvol.R |only
MethComp-1.3/MethComp/data/sbp.MC.R |only
MethComp-1.3/MethComp/data/sbp.R |only
MethComp-1.3/MethComp/data/scint.R |only
MethComp-1.3/MethComp/inst/doc/Deming.tex |only
MethComp-1.3/MethComp/inst/doc/introMethComp.rnw |only
80 files changed, 1411 insertions(+), 908 deletions(-)
Title: Amelia II: A Program for Missing Data
Diff between Amelia versions 1.5-5 dated 2011-12-02 and 1.6.1 dated 2012-03-29
Description: Amelia II "multiply imputes" missing data in a single
cross-section (such as a survey), from a time series (like
variables collected for each year in a country), or from a
time-series-cross-sectional data set (such as collected by
years for each of several countries). Amelia II implements our
bootstrapping-based algorithm that gives essentially the same
answers as the standard IP or EMis approaches, is usually
considerably faster than existing approaches and can handle
many more variables. Unlike Amelia I and other statistically
rigorous imputation software, it virtually never crashes (but
please let us know if you find to the contrary!). The program
also generalizes existing approaches by allowing for trends in
time series across observations within a cross-sectional unit,
as well as priors that allow experts to incorporate beliefs
they have about the values of missing cells in their data.
Amelia II also includes useful diagnostics of the fit of
multiple imputation models. The program works from the R
command line or via a graphical user interface that does not
require users to know R.
Author: James Honaker
Maintainer: Matthew Blackwell
Amelia-1.5-5/Amelia/inst/doc/action_go.gif |only
Amelia-1.5-5/Amelia/inst/doc/action_save.gif |only
Amelia-1.5-5/Amelia/inst/doc/action_stop.gif |only
Amelia-1.5-5/Amelia/inst/doc/amelia.ico |only
Amelia-1.5-5/Amelia/inst/doc/arrow_down.gif |only
Amelia-1.5-5/Amelia/inst/doc/arrow_left.gif |only
Amelia-1.5-5/Amelia/inst/doc/arrow_up.gif |only
Amelia-1.5-5/Amelia/inst/doc/copyRd.Rout |only
Amelia-1.5-5/Amelia/inst/doc/flag_red.gif |only
Amelia-1.5-5/Amelia/inst/doc/gallery19.gif |only
Amelia-1.5-5/Amelia/inst/doc/gallery19.jpg |only
Amelia-1.5-5/Amelia/inst/doc/histogram.gif |only
Amelia-1.5-5/Amelia/inst/doc/icon_accept.gif |only
Amelia-1.5-5/Amelia/inst/doc/icon_clock.gif |only
Amelia-1.5-5/Amelia/inst/doc/icon_user.gif |only
Amelia-1.5-5/Amelia/inst/doc/icon_world.gif |only
Amelia-1.5-5/Amelia/inst/doc/page-R.gif |only
Amelia-1.5-5/Amelia/inst/doc/page.gif |only
Amelia-1.5-5/Amelia/inst/doc/page_dta.gif |only
Amelia-1.5-5/Amelia/inst/doc/page_edit.gif |only
Amelia-1.5-5/Amelia/inst/doc/page_sas.gif |only
Amelia-1.5-5/Amelia/inst/doc/page_spss.gif |only
Amelia-1.5-5/Amelia/inst/doc/page_text.gif |only
Amelia-1.5-5/Amelia/inst/doc/page_up.gif |only
Amelia-1.5-5/Amelia/inst/doc/table.gif |only
Amelia-1.6.1/Amelia/.Rinstignore |only
Amelia-1.6.1/Amelia/DESCRIPTION | 47
Amelia-1.6.1/Amelia/LICENSE | 2
Amelia-1.6.1/Amelia/MD5 | 93 -
Amelia-1.6.1/Amelia/NAMESPACE | 7
Amelia-1.6.1/Amelia/NEWS | 12
Amelia-1.6.1/Amelia/R/amcheck.r | 37
Amelia-1.6.1/Amelia/R/ameliagui.r | 1469 +++++++++++++--------------
Amelia-1.6.1/Amelia/R/diag.r | 355 +++---
Amelia-1.6.1/Amelia/R/emb.r | 170 +--
Amelia-1.6.1/Amelia/R/missmap.R | 40
Amelia-1.6.1/Amelia/R/summary.amelia.R | 20
Amelia-1.6.1/Amelia/R/transform.amelia.R |only
Amelia-1.6.1/Amelia/R/write.amelia.R | 61 -
Amelia-1.6.1/Amelia/R/zzz.R | 19
Amelia-1.6.1/Amelia/inst/doc/amelia.Rnw | 109 +-
Amelia-1.6.1/Amelia/inst/doc/amelia.pdf |binary
Amelia-1.6.1/Amelia/inst/doc/index.shtml | 5
Amelia-1.6.1/Amelia/inst/doc/makeDocs | 1
Amelia-1.6.1/Amelia/inst/gui |only
Amelia-1.6.1/Amelia/inst/test |only
Amelia-1.6.1/Amelia/man/ameliabind.Rd | 2
Amelia-1.6.1/Amelia/man/mi.meld.Rd |only
Amelia-1.6.1/Amelia/man/missmap.Rd | 10
Amelia-1.6.1/Amelia/man/overimpute.Rd | 18
Amelia-1.6.1/Amelia/man/transform.amelia.Rd |only
Amelia-1.6.1/Amelia/man/write.amelia.Rd | 31
52 files changed, 1451 insertions(+), 1057 deletions(-)
Title: Nonparametric spatial data analysis
Diff between McSpatial versions 1.0 dated 2012-01-30 and 1.1 dated 2012-03-29
Description: Locally weighted regression, semiparametric and
conditionally parametric regression, fourier and cubic spline
functions, GMM and linearized spatial logit and probit,
k-density functions and counterfactuals, subcenter
identification, misclassification probit, nonparametric
quantile regression and conditional density functions,
Machado-Mata decomposition for quantile regressions, spatial AR
model, repeat sales models, conditionally parametric logit and
probit
Author: Daniel McMillen
Maintainer: Daniel McMillen
DESCRIPTION | 15 ++++++++-------
MD5 | 10 +++++-----
NAMESPACE | 12 +++++++++---
R/qregsim2.R | 1 +
man/CookCensusTracts.Rd | 1 -
man/McSpatial-package.Rd | 6 +++---
6 files changed, 26 insertions(+), 19 deletions(-)
Title: Gaussian Copula Marginal Regression
Diff between gcmr versions 0.2 dated 2012-01-13 and 0.3 dated 2012-03-29
Description: likelihood inference in Gaussian copula marginal
regression models
Author: Guido Masarotto and Cristiano Varin
Maintainer: Guido Masarotto
DESCRIPTION | 6 +++---
MD5 | 6 +++---
R/cormat.R | 3 +++
man/cluster.cormat.Rd | 3 ++-
4 files changed, 11 insertions(+), 7 deletions(-)
Title: Plot methods for computer experiments design and surrogate.
Diff between DiceView versions 1.1-0 dated 2011-08-25 and 1.2-0 dated 2012-03-29
Description: View 2D/3D sections or contours of computer experiments
designs, surrogates or test functions.
Author: Yann Richet, Yves Deville, Clement Chevalier
Maintainer: Yann Richet
ChangeLog | 8 +++
DESCRIPTION | 12 ++--
MD5 | 46 ++++++++++--------
NAMESPACE | 3 +
R/Utils.R | 59 -----------------------
R/contourview.fun.R |only
R/contourview.km.R | 38 ++++++++++++---
R/contourview.list.R | 37 ++++++++++++--
R/sectionview.fun.R |only
R/sectionview.km.R | 47 +++++++++++++-----
R/sectionview.list.R | 41 ++++++++++++----
R/sectionview3d.fun.R |only
R/sectionview3d.km.R | 26 ++++++----
R/sectionview3d.list.R | 16 ++++--
R/wrapper.R | 114 ++++++++++++++++++++++++++++++++++++++++++++--
man/contourview.Rd | 12 ++--
man/contourview.fun.Rd |only
man/contourview.km.Rd | 11 +++-
man/contourview.list.Rd | 14 ++++-
man/sectionview.Rd | 31 ++++--------
man/sectionview.fun.Rd |only
man/sectionview.km.Rd | 7 ++
man/sectionview.list.Rd | 14 +++--
man/sectionview3d.Rd | 16 ++++--
man/sectionview3d.fun.Rd |only
man/sectionview3d.km.Rd | 12 +++-
man/sectionview3d.list.Rd | 12 +++-
27 files changed, 387 insertions(+), 189 deletions(-)
Title: Loglinear Models for Capture-Recapture Experiments
Diff between Rcapture versions 1.2-0 dated 2009-04-28 and 1.2-1 dated 2012-03-29
Description: Estimation of abundance and other demographic parameters
for closed populations, open populations and the robust design
in capture-recapture experiments using loglinear models.
Author: Sophie Baillargeon
Maintainer: Sophie Baillargeon
Rcapture-1.2-0/Rcapture/inst/doc/Rplots.pdf |only
Rcapture-1.2-0/Rcapture/inst/doc/biblio |only
Rcapture-1.2-0/Rcapture/inst/doc/fig |only
Rcapture-1.2-0/Rcapture/inst/doc/jss.bst |only
Rcapture-1.2-0/Rcapture/inst/doc/jss.cls |only
Rcapture-1.2-1/Rcapture/DESCRIPTION | 8
Rcapture-1.2-1/Rcapture/MD5 |only
Rcapture-1.2-1/Rcapture/NEWS | 19
Rcapture-1.2-1/Rcapture/R/closedp.R | 15
Rcapture-1.2-1/Rcapture/R/closedp.bc.R | 9
Rcapture-1.2-1/Rcapture/R/closedpCI.R | 7
Rcapture-1.2-1/Rcapture/R/descriptive.R | 2
Rcapture-1.2-1/Rcapture/R/histpos.R | 11
Rcapture-1.2-1/Rcapture/R/internal.R | 15
Rcapture-1.2-1/Rcapture/R/robustd.0.R | 2
Rcapture-1.2-1/Rcapture/R/robustd.t.r | 2
Rcapture-1.2-1/Rcapture/data/duck.rda |binary
Rcapture-1.2-1/Rcapture/data/hare.rda |binary
Rcapture-1.2-1/Rcapture/inst/doc/RcaptureJSS.Rnw | 2152 +++++++++++------------
Rcapture-1.2-1/Rcapture/inst/doc/RcaptureJSS.pdf |binary
Rcapture-1.2-1/Rcapture/man/Rcapture.package.Rd | 6
Rcapture-1.2-1/Rcapture/man/closedp.custom.Rd | 2
Rcapture-1.2-1/Rcapture/vignettes |only
23 files changed, 1135 insertions(+), 1115 deletions(-)
Title: OpenIntro data sets and supplemental functions
Diff between openintro versions 1.2 dated 2011-04-26 and 1.3 dated 2012-03-29
Description: This package is a supplement to OpenIntro Statistics,
which is a free textbook available at openintro.org (at-cost
paperbacks are also available for under $10 on Amazon). The
package contains data sets used in the textbook along with
custom plotting functions for reproducing book figures. Note
that many functions and examples include color transparency.
Some plotting elements may not show up properly (or at all) in
some Windows versions.
Author: David M Diez, Christopher D Barr, and Mine Cetinkaya-Rundel
Maintainer: David M Diez
.Rapp.history | 1707 ++++++++++-------------------------------------
DESCRIPTION | 33
MD5 |only
NAMESPACE |only
R/boxPlot.R | 264 +++----
R/treeDiag.R |only
R/zzz.R |only
data/.Rapp.history | 91 ++
data/.Rhistory |only
data/MLB.rda |binary
data/ballBearing.rda |binary
data/cars.rda |binary
data/census.rda |binary
data/classData.rda |only
data/credits.rda |binary
data/govRace10.rda |binary
data/gradesTV.rda |binary
data/heartTr.rda |binary
data/house.rda |binary
data/houseRace10.rda |binary
data/ipod.rda |binary
data/mammals.rda |binary
data/marathon.rda |binary
data/marioKart.rda |binary
data/mlbBat10.rda |binary
data/possum.rda |binary
data/prRace08.rda |binary
data/president.rda |binary
data/run10.rda |binary
data/satGPA.rda |binary
data/senateRace10.rda |binary
data/smoking.rda |binary
data/textbooks.rda |binary
data/tips.rda |binary
data/unempl.rda |binary
man/MLB.Rd | 2
man/boxPlot.Rd | 11
man/census.Rd | 2
man/classData.Rd |only
man/edaPlot.Rd | 4
man/figures |only
man/house.Rd | 4
man/houseRace10.Rd | 2
man/mammals.Rd | 2
man/marathon.Rd | 2
man/marioKart.Rd | 6
man/openintro-package.Rd | 12
man/prRace08.Rd | 2
man/president.Rd | 2
man/smoking.Rd | 2
man/treeDiag.Rd |only
man/unempl.Rd | 4
52 files changed, 649 insertions(+), 1503 deletions(-)
Title: Tools for Exploring Multivariate Data via ICS/ICA
Diff between ICS versions 1.2-2 dated 2010-10-05 and 1.2-3 dated 2012-03-29
Description: The package implements Tyler et al.'s and Oja et al.'s
method of two different scatter matrices to obtain an invariant
coordinate system or independent components, depending on the
underlying assumptions.
Author: Klaus Nordhausen, Hannu Oja, David E. Tyler
Maintainer: Klaus Nordhausen
ICS-1.2-2/ICS/inst/doc/Rplots.pdf |only
ICS-1.2-3/ICS/DESCRIPTION | 8 ++++----
ICS-1.2-3/ICS/MD5 |only
ICS-1.2-3/ICS/inst/CHANGES | 5 +++++
ICS-1.2-3/ICS/inst/doc/ICS.pdf |binary
ICS-1.2-3/ICS/man/ICS-package.Rd | 4 ++--
ICS-1.2-3/ICS/man/covAxis.Rd | 4 ++--
ICS-1.2-3/ICS/man/scovq.Rd | 2 +-
8 files changed, 14 insertions(+), 9 deletions(-)
Title: A package for statistical analysis in epidemiology.
Diff between Epi versions 1.1.33 dated 2012-01-24 and 1.1.34 dated 2012-03-29
Description: Functions for demographic and epidemiological analysis in
the Lexis diagram, i.e. register and cohort follow-up data,
including interval censored data and representation of
multistate data. Also some useful functions for tabulation and
plotting. Contains some epidemiological datasets.
Author: Bendix Carstensen, Martyn Plummer, Esa Laara, Michael Hills et.
al.
Maintainer: Bendix Carstensen
Epi-1.1.33/Epi/man/msdata.Lexis.Rd |only
Epi-1.1.34/Epi/CHANGES | 19 +
Epi-1.1.34/Epi/DESCRIPTION | 12
Epi-1.1.34/Epi/MD5 | 79 +++---
Epi-1.1.34/Epi/NAMESPACE | 10
Epi-1.1.34/Epi/R/MS.boxes.R | 14 +
Epi-1.1.34/Epi/R/apc.fit.R | 12
Epi-1.1.34/Epi/R/ci.lin.R | 10
Epi-1.1.34/Epi/R/foreign.R |only
Epi-1.1.34/Epi/R/lexis.R | 1
Epi-1.1.34/Epi/R/plotEst.R | 57 +++-
Epi-1.1.34/Epi/R/stack.Lexis.R | 31 --
Epi-1.1.34/Epi/data/B.dk.rda |binary
Epi-1.1.34/Epi/data/DMconv.rda |binary
Epi-1.1.34/Epi/data/DMlate.rda |binary
Epi-1.1.34/Epi/data/DMrand.rda |binary
Epi-1.1.34/Epi/data/M.dk.rda |binary
Epi-1.1.34/Epi/data/N.dk.rda |binary
Epi-1.1.34/Epi/data/S.typh.rda |binary
Epi-1.1.34/Epi/data/Y.dk.rda |binary
Epi-1.1.34/Epi/data/bdendo.rda |binary
Epi-1.1.34/Epi/data/bdendo11.rda |binary
Epi-1.1.34/Epi/data/births.rda |binary
Epi-1.1.34/Epi/data/blcaIT.rda |binary
Epi-1.1.34/Epi/data/brv.rda |binary
Epi-1.1.34/Epi/data/diet.rda |binary
Epi-1.1.34/Epi/data/ewrates.rda |binary
Epi-1.1.34/Epi/data/gmortDK.rda |binary
Epi-1.1.34/Epi/data/hivDK.rda |binary
Epi-1.1.34/Epi/data/lep.rda |binary
Epi-1.1.34/Epi/data/lungDK.rda |binary
Epi-1.1.34/Epi/data/mortDK.rda |binary
Epi-1.1.34/Epi/data/nickel.rda |binary
Epi-1.1.34/Epi/data/occup.rda |binary
Epi-1.1.34/Epi/data/thoro.rda |binary
Epi-1.1.34/Epi/inst/doc/Follow-up.pdf | 410 +++++++++++++++++-----------------
Epi-1.1.34/Epi/man/M.dk.Rd | 15 +
Epi-1.1.34/Epi/man/MS.boxes.Rd | 21 +
Epi-1.1.34/Epi/man/ci.lin.Rd | 48 ++-
Epi-1.1.34/Epi/man/foreign.Lexis.Rd |only
Epi-1.1.34/Epi/man/plotEst.Rd | 31 +-
Epi-1.1.34/Epi/man/stack.Lexis.Rd | 7
42 files changed, 448 insertions(+), 329 deletions(-)
Title: Trees WIth eXtra splits
Diff between TWIX versions 0.2.10 dated 2009-11-03 and 0.2.19 dated 2012-03-29
Description: Trees with extra splits
Author: Sergej Potapov
Maintainer: Sergej Potapov
TWIX-0.2.10/TWIX/R/impor.R |only
TWIX-0.2.10/TWIX/data/olives.txt |only
TWIX-0.2.10/TWIX/src/split-sum.c |only
TWIX-0.2.10/TWIX/src/split-sum_cr.c |only
TWIX-0.2.19/TWIX/DESCRIPTION | 15
TWIX-0.2.19/TWIX/MD5 |only
TWIX-0.2.19/TWIX/NAMESPACE | 2
TWIX-0.2.19/TWIX/R/Deav.leaf.R | 15
TWIX-0.2.19/TWIX/R/Devplot.R | 348 ++++++++---------
TWIX-0.2.19/TWIX/R/bagg.boottwix.R | 131 ++++--
TWIX-0.2.19/TWIX/R/boottwix.R | 248 ++++++------
TWIX-0.2.19/TWIX/R/importance.R |only
TWIX-0.2.19/TWIX/R/predict.twix.R | 205 +++++-----
TWIX-0.2.19/TWIX/R/s_b.padj.R | 628 ++++++++++++++++----------------
TWIX-0.2.19/TWIX/R/scree.plot.R | 2
TWIX-0.2.19/TWIX/R/sp.bagg.R | 474 ++++++++++++------------
TWIX-0.2.19/TWIX/R/sp.slave.R | 363 +++++++++---------
TWIX-0.2.19/TWIX/R/splitt.deviance.R | 10
TWIX-0.2.19/TWIX/R/splitt.padj.R | 15
TWIX-0.2.19/TWIX/R/trace.plot.R | 6
TWIX-0.2.19/TWIX/R/tuneTWIX.R | 345 ++++++++++++++++-
TWIX-0.2.19/TWIX/R/twix.R | 38 +
TWIX-0.2.19/TWIX/R/utils.R | 190 ++++-----
TWIX-0.2.19/TWIX/data/olives.txt.gz |only
TWIX-0.2.19/TWIX/man/Devplot.Rd | 14
TWIX-0.2.19/TWIX/man/bagg.default.Rd | 81 ++--
TWIX-0.2.19/TWIX/man/bootwix.Rd | 88 ++--
TWIX-0.2.19/TWIX/man/deviance.twix.Rd | 2
TWIX-0.2.19/TWIX/man/get.splitvar.Rd | 2
TWIX-0.2.19/TWIX/man/get.tree.Rd | 2
TWIX-0.2.19/TWIX/man/plot.twix.Rd | 14
TWIX-0.2.19/TWIX/man/scree.plot.Rd | 2
TWIX-0.2.19/TWIX/man/splitt_dev.Rd | 44 +-
TWIX-0.2.19/TWIX/man/splitt_padj.Rd | 42 +-
TWIX-0.2.19/TWIX/man/trace.plot.Rd | 34 -
TWIX-0.2.19/TWIX/man/tuneTWIX.Rd | 104 +++--
TWIX-0.2.19/TWIX/man/twix.Rd | 163 ++++----
TWIX-0.2.19/TWIX/src/important.c | 6
TWIX-0.2.19/TWIX/src/maxstat.c | 132 ++++--
TWIX-0.2.19/TWIX/src/maxstat.h | 6
TWIX-0.2.19/TWIX/src/pLausen94.c | 160 +++++---
TWIX-0.2.19/TWIX/src/pLausen94.h | 12
TWIX-0.2.19/TWIX/src/predict.c | 24 -
TWIX-0.2.19/TWIX/src/split-summary.c |only
TWIX-0.2.19/TWIX/src/split-summary.h |only
TWIX-0.2.19/TWIX/src/split-summary_cr.c |only
TWIX-0.2.19/TWIX/src/split_boot.c | 5
TWIX-0.2.19/TWIX/src/split_cat.c | 2
TWIX-0.2.19/TWIX/src/split_cat.h | 5
TWIX-0.2.19/TWIX/src/split_int.c | 43 +-
TWIX-0.2.19/TWIX/src/split_num.c | 5
TWIX-0.2.19/TWIX/src/split_rule.c | 12
TWIX-0.2.19/TWIX/src/tw_table.c | 9
TWIX-0.2.19/TWIX/src/tw_table.h | 4
TWIX-0.2.19/TWIX/src/utils.c | 114 ++++-
TWIX-0.2.19/TWIX/src/utils.h | 42 ++
56 files changed, 2403 insertions(+), 1805 deletions(-)
Title: Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
Diff between DATforDCEMRI versions 0.52 dated 2011-10-26 and 0.53 dated 2012-03-29
Description: This package performs voxel-wise deconvolution analysis of
DCE-MRI contrast agent concentration versus time data and
generates the Impulse Response Function, which can be used to
approximate commonly utilized kinetic parameters such as
K^trans and ve. An interactive advanced voxel diagnosis tool
(AVDT) is also provided to facilitate easy navigation of
voxel-wise data.
Author: Gregory Z. Ferl
Maintainer: Gregory Z. Ferl
DESCRIPTION | 6 +++---
MD5 | 6 +++---
R/DAT.R | 21 +++++++++++++++------
inst/CITATION | 2 +-
4 files changed, 22 insertions(+), 13 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-08-17 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-08-17 1.0.2
2010-07-29 1.0.1
2009-12-14 1.0.0