Fri, 13 Apr 2012

Package VarianceGamma updated to version 0.3-1 with previous version 0.3-0 dated 2010-03-01

Title: The Variance Gamma Distribution
Description: This package provides functions for the variance gamma distributions. Density, distribution and quantile functions. Functions for random number generation and fitting of the variance gamma to data. Also, functions for computing moments of the variance gamma distribution of any order about any location. In addition, there are functions for checking the validity of parameters and to interchange different sets of parameterizatons for the variance gamma distribution.
Author: David Scott and Christine Yang Dong
Maintainer: David Scott

Diff between VarianceGamma versions 0.3-0 dated 2010-03-01 and 0.3-1 dated 2012-04-13

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New package sybilDynFBA with initial version 0.0.1
Package: sybilDynFBA
Type: Package
Title: Dynamic FBA : dynamic flux balance analysis
Version: 0.0.1
Date: 2011-04-25
Author: Abdelmoneim Amer Desouki
Maintainer: Abdelmoneim Amer Desouki
Depends: R (>= 2.10.0), sybil, methods
Suggests: sybil
Description: In this package the dynamic FBA technique proposed by Varma was implemented.
License: GPL-3
LazyLoad: yes
Packaged: 2012-04-13 07:24:37 UTC; Abdelmonem
Repository: CRAN
Date/Publication: 2012-04-13 20:16:53

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Package sphet updated to version 1.1-12 with previous version 1.1-0 dated 2010-09-22

Title: Spatial Models with heteroskedastic innovations
Description: GM estimation and Spatial HAC
Author: Gianfranco Piras
Maintainer: Gianfranco Piras

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Package SkewHyperbolic updated to version 0.3-1 with previous version 0.2-0 dated 2010-03-01

Title: The Skew Hyperbolic Student t-Distribution
Description: Functions are provided for the density function, distribution function, quantiles and random number generation for the skew hyperbolic t-distribution. There are also functions that fit the distribution to data. There are functions for the mean, variance, skewness, kurtosis and mode of a given distribution and to calculate moments of any order about any centre. To assess goodness of fit, there are functions to generate a Q-Q plot and a P-P plot.
Author: David Scott , Fiona Grimson
Maintainer: David Scott

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Package quantreg updated to version 4.79 with previous version 4.78 dated 2012-03-22

Title: Quantile Regression
Description: Quantile regression and related methods.
Author: Roger Koenker
Maintainer: Roger Koenker

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Package opencpu.demo updated to version 0.4-9 with previous version 0.4-8 dated 2012-02-08

Title: OpenCPU Demo apps.
Description: Some demo R functions and apps for the OpenCPU framework. See http://www.opencpu.org for more details.
Author: Jeroen Ooms and others as specified in the manual page.
Maintainer: Jeroen Ooms

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Package modTempEff updated to version 1.5.1 with previous version 1.5 dated 2010-01-13

Title: Modelling temperature effects using time series data
Description: Fits a Constrained Segmented Distributed Lag regression model to epidemiological time series of mortality, temperature, and other confounders.
Author: Vito M. R. Muggeo
Maintainer: Vito M.R. Muggeo

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Package MKmisc updated to version 0.91 with previous version 0.9 dated 2011-11-30

Title: Miscellaneous Functions from M. Kohl
Description: Miscellaneous Functions from M. Kohl
Author: Matthias Kohl
Maintainer: Matthias Kohl

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Package lcmm updated to version 1.5.1 with previous version 1.4-3 dated 2012-01-15

Title: Estimation of various latent class mixed models, joint latent class mixed models and mixed models for curvilinear outcomes
Description: This package provides functions for the estimation of various latent class mixed models, joint latent latent class mixed models and mixed models for curvilinear outcomes using a maximum likelihood method
Author: Cecile Proust-Lima, Amadou Diakite and Benoit Liquet
Maintainer:

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Package ggmap updated to version 2.0 with previous version 1.3 dated 2012-03-16

Title: A package for spatial visualization with Google Maps and OpenStreetMap
Description: ggmap allows for the easy visualization of spatial data and models on top of Google Maps, OpenStreetMaps, Stamen Maps, or CloudMade Maps using ggplot2.
Author: David Kahle , Hadley Wickham
Maintainer: David Kahle

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Package cherry updated to version 0.2-6 with previous version 0.1-5 dated 2012-01-23

Title: Multiple testing methods for exploratory research
Description: This package implements a class of multiple testing methods that does not prescribe the user what hypotheses to reject, but instead allows the user to select the set of selected hypotheses freely. The multiple testing procedure aids this selection by providing an upper confidence bound for the number of false rejections among the selected set. Because the confidence bounds are simultaneous for all possible rejected sets, the validity is not compromised by post hoc selection.
Author: Jelle Goeman
Maintainer: Jelle Goeman

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Package VGAM updated to version 0.8-7 with previous version 0.8-6 dated 2012-02-27

Title: Vector Generalized Linear and Additive Models
Description: Vector generalized linear and additive models, and associated models (Reduced-Rank VGLMs, Quadratic RR-VGLMs, Reduced-Rank VGAMs). This package fits many models and distribution by maximum likelihood estimation (MLE) or penalized MLE. Also fits constrained ordination models in ecology.
Author: Thomas W. Yee
Maintainer: Thomas Yee

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New package hydroPSO with initial version 0.1-54-1
Package: hydroPSO
Type: Package
Title: Model-Independent Particle Swarm Optimisation for Environmental Models
Version: 0.1-54-1
Date: 2012-04-01
Author: Mauricio Zambrano-Bigiarini [aut, cre] and Rodrigo Rojas [ctb]
Author@R: c(person("Mauricio", "Zambrano-Bigiarini", email = "mzb.devel@gmail.com", role=c("aut", "cre") ), person("Rodrigo", "Rojas", email = "Rodrigo.RojasMujica@gmail.com", role=c("ctb") ) )
Maintainer: Mauricio Zambrano-Bigiarini
Description: This package implements a state-of-the-art version of the Particle Swarm Optimisation (PSO) algorithm, with a special focus on the calibration of environmental models. hydroPSO is model-independent, allowing the user to easily interface any model code with the calibration engine (PSO). hydroPSO includes a series of controlling options and PSO variants to fine-tune the performance of the calibration engine. An advanced sensitivity analysis function together with user-friendly plotting summaries facilitate the interpretation and assessment of the calibration results. Bugs reports/comments/questions are very welcomed.
License: GPL (>= 2)
Depends: R (>= 2.10.0)
Imports: Hmisc, sp, lattice, grid
Suggests: hydroGOF, hydroTSM, lhs, zoo, multicore, scatterplot3d, vioplot
URL: http://www.rforge.net/hydroPSO, http://cran.r-project.org/web/packages/hydroPSO
Classification: optimisation, optimization, calibration, environment, environmental sciences, hydrology, PSO
LazyLoad: yes
ByteCompile: TRUE
Packaged: 2012-04-12 22:54:21 UTC; hzambran
Repository: CRAN
Date/Publication: 2012-04-13 11:03:10

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New package disclapmix with initial version 0.1
Package: disclapmix
Type: Package
Title: Discrete Laplace mixture inference using the EM algorithm
Version: 0.1
Date: 2012-04-13
Author: Mikkel Meyer Andersen and Poul Svante Eriksen
Maintainer: Mikkel Meyer Andersen
Description: disclapmix makes inference in a mixture of Discrete Laplace distributions using the EM algorithm.
License: GPL-2
Depends: R (>= 2.14.0), disclap, cluster, parallel
LazyLoad: yes
LazyData: yes
Packaged: 2012-04-13 10:35:16 UTC; mikl
Repository: CRAN
Date/Publication: 2012-04-13 11:05:34

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Package CompRandFld updated to version 1.0.2 with previous version 1.0.1 dated 2012-03-30

Title: Composite-likelihood based Analysis of Random Fields
Description: The aim of this package is to collect a set of procedures for the analysis of Random Fields by Composite Likelihood methods. Spatial analysis often involves dealing with large dataset. Therefore even simple studies may be too computationally demanding. Composite likelihood based methods are emerging as useful tools for mitigating such computational problems and show satisfactory results when compared with other techniques such as, for example the tapering method. Moreover, composite likelihood (and related quantities) have some good properties similar to those of the standard likelihood.
Author: Simone Padoan , Moreno Bevilacqua
Maintainer: Simone Padoan

Diff between CompRandFld versions 1.0.1 dated 2012-03-30 and 1.0.2 dated 2012-04-13

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Package vines updated to version 1.0.4 with previous version 1.0.3 dated 2011-07-29

Title: Multivariate Dependence Modeling with Vines
Description: Vines are graphical models for pair-copula constructions that allow building high-dimensional distributions using bivariate copulas and marginal density functions. This package contains S4 classes for vines (C-vines and D-vines) and methods for inference, goodness-of-fit tests, density evaluation, distribution function evaluation, and simulation.
Author: Yasser González-Fernández and Marta Soto
Maintainer: Yasser González-Fernández

Diff between vines versions 1.0.3 dated 2011-07-29 and 1.0.4 dated 2012-04-13

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Package GeneralizedHyperbolic updated to version 0.8-0 with previous version 0.7-0 dated 2011-12-21

Title: The Generalized Hyperbolic Distribution
Description: This package provides functions for the hyperbolic and related distributions. Density, distribution and quantile functions and random number generation are provided for the hyperbolic distribution, the generalized hyperbolic distribution, the generalized inverse Gaussian distribution and the skew-Laplace distribution. Additional functionality is provided for the hyperbolic distribution, normal inverse Gaussian distribution and generalized inverse Gaussian distribution, including fitting of these distributions to data. Linear models with hyperbolic errors may be fitted using hyperblmFit.
Author: David Scott
Maintainer: David Scott

Diff between GeneralizedHyperbolic versions 0.7-0 dated 2011-12-21 and 0.8-0 dated 2012-04-13

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Package DistributionUtils updated to version 0.5-1 with previous version 0.5-0 dated 2011-12-16

Title: Distribution Utilities
Description: This package contains utilities which are of use in the packages I have developed for dealing with distributions. Currently these packages are GeneralizedHyperbolic, VarianceGamma, and SkewHyperbolic and NormalLaplace. Each of these packages requires DistributionUtils. Functionality includes sample skewness and kurtosis, log-histogram, tail plots, moments by integration, changing the point about which a moment is calculated, functions for testing distributions using inversion tests and the Massart inequality. Also includes an implementation of the incomplete Bessel K function.
Author: David Scott
Maintainer: David Scott

Diff between DistributionUtils versions 0.5-0 dated 2011-12-16 and 0.5-1 dated 2012-04-13

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Package SAPP (with last version 1.0.1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-09-09 1.0.1
2010-07-02 1.0.0

Permanent link
Package verification updated to version 1.32 with previous version 1.31 dated 2010-01-11

Title: Forecast verification utilities.
Description: This package contains utilities for verification of discrete,continuous, probabilistic forecasts and forecast expressed as parametric distributions.
Author: NCAR - Research Application Program
Maintainer: Eric Gilleland

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Package track updated to version 1.0-15 with previous version 1.0-13 dated 2011-12-11

Title: Track Objects
Description: Automatically stores objects in files on disk so that files are rewritten when objects are changed, and so that objects are accessible but do not occupy memory until they are accessed. Keeps track of times when objects are created and modified, and caches some basic characteristics of objects to allow for fast summaries of objects. Also provides a command history mechanism that saves the last command to a history file after each command completes.
Author: Tony Plate
Maintainer: Tony Plate

Diff between track versions 1.0-13 dated 2011-12-11 and 1.0-15 dated 2012-04-13

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Package scriptests updated to version 1.0-9 with previous version 1.0-8 dated 2011-11-27

Title: Transcript-based unit tests that are easy to create and maintain
Description: Support for using .Rt (transcript) tests in the tests directory of a package. Provides more convenience and features than the standard .R/.Rout.save tests. Tests can be run under R CMD check and also interactively. Provides source.pkg() for quickly loading code, DLLs, and data from a package for use in an edit/compile/test development cycle.
Author: Tony Plate
Maintainer: Tony Plate

Diff between scriptests versions 1.0-8 dated 2011-11-27 and 1.0-9 dated 2012-04-13

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Package LIHNPSD updated to version 0.2.1 with previous version 0.2 dated 2012-04-01

Title: Poisson Subordinated Distribution
Description: A Poisson Subordinated Distribution to capture major leptokurtic features in log-return time series of financial data.
Author: Stephen Horng-Twu Lihn
Maintainer: Stephen Horng-Twu Lihn

Diff between LIHNPSD versions 0.2 dated 2012-04-01 and 0.2.1 dated 2012-04-13

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Package coefplot updated to version 1.1.7 with previous version 1.1.6 dated 2012-01-29

Title: Plots Coefficients from Fitted Models
Description: Plots the coefficients from a model object
Author: Jared P. Lander
Maintainer:

Diff between coefplot versions 1.1.6 dated 2012-01-29 and 1.1.7 dated 2012-04-13

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