Title: Spatial dependence: weighting schemes, statistics and models
Diff between spdep versions 0.5-45 dated 2012-03-18 and 0.5-46 dated 2012-05-06
Description: A collection of functions to create spatial weights matrix
objects from polygon contiguities, from point patterns by
distance and tesselations, for summarising these objects, and
for permitting their use in spatial data analysis, including
regional aggregation by minimum spanning tree; a collection of
tests for spatial autocorrelation, including global Moran's I,
APLE, Geary's C, Hubert/Mantel general cross product statistic,
Empirical Bayes estimates and Assunção/Reis Index, Getis/Ord G
and multicoloured join count statistics, local Moran's I and
Getis/Ord G, saddlepoint approximations and exact tests for
global and local Moran's I; and functions for estimating
spatial simultaneous autoregressive (SAR) lag and error models,
impact measures for lag models, weighted and unweighted SAR and
CAR spatial regression models, semi-parametric and Moran
eigenvector spatial filtering, GM SAR error models, and
generalized spatial two stage least squares models.
Author: Roger Bivand
Maintainer: Roger Bivand
ChangeLog | 36 +++++++++++
DESCRIPTION | 12 +--
MD5 | 42 ++++++-------
NAMESPACE | 3
R/aple.mc.R | 6 -
R/impacts.R | 6 -
R/lm.LMtests.R | 15 ++++
R/localmoran.R | 4 -
R/moran.R | 9 ++
R/poly2nb.R | 2
R/sarlm.R | 153 ++++++++++++++++++++++++++++++-------------------
R/summary.nb.R | 4 +
inst/ChangeLog | 36 +++++++++++
inst/doc/CO69.pdf |binary
inst/doc/sids.pdf |binary
man/aple.mc.Rd | 9 ++
man/lm.LMtests.Rd | 13 +++-
man/nb2lines.Rd | 2
man/nb2listw.Rd | 6 -
man/predict.sarlm.Rd | 9 +-
man/set.spChkOption.Rd | 2
spdep-Ex.R | 19 ++++--
22 files changed, 279 insertions(+), 109 deletions(-)
Title: R bindings for Gtk 2.8.0 and above
Diff between RGtk2 versions 2.20.21 dated 2012-01-17 and 2.20.23 dated 2012-05-06
Description: Facilities in the R language for programming graphical
interfaces using Gtk, the Gimp Tool Kit.
Author: Michael Lawrence
Maintainer: Michael Lawrence
RGtk2-2.20.21/RGtk2/inst/doc/.Rinstignore |only
RGtk2-2.20.23/RGtk2/.Rinstignore |only
RGtk2-2.20.23/RGtk2/DESCRIPTION | 6 +-
RGtk2-2.20.23/RGtk2/MD5 | 46 +++++++++----------
RGtk2-2.20.23/RGtk2/R/classes.R | 53 +++++++++--------------
RGtk2-2.20.23/RGtk2/R/gobject.R | 4 +
RGtk2-2.20.23/RGtk2/R/gtkFuncs.R | 10 ++--
RGtk2-2.20.23/RGtk2/R/gtkzConstructors.R | 6 +-
RGtk2-2.20.23/RGtk2/R/utils.R | 49 ---------------------
RGtk2-2.20.23/RGtk2/R/zzz.R | 10 ++++
RGtk2-2.20.23/RGtk2/demo/alphaSliderClass.R | 7 ---
RGtk2-2.20.23/RGtk2/demo/appWindow.R | 7 ++-
RGtk2-2.20.23/RGtk2/demo/iconView.R | 2
RGtk2-2.20.23/RGtk2/demo/slide.R | 6 --
RGtk2-2.20.23/RGtk2/inst/doc/overview2.pdf |binary
RGtk2-2.20.23/RGtk2/inst/include/RGtk2/gobject.h | 5 ++
RGtk2-2.20.23/RGtk2/man/GType.Rd | 1
RGtk2-2.20.23/RGtk2/man/classes.Rd | 2
RGtk2-2.20.23/RGtk2/src/Makevars | 2
RGtk2-2.20.23/RGtk2/src/RGtk2/gobject.h | 5 ++
RGtk2-2.20.23/RGtk2/src/atkFuncs.c | 8 +--
RGtk2-2.20.23/RGtk2/src/gioFuncs.c | 6 +-
RGtk2-2.20.23/RGtk2/src/glib.c | 15 +++++-
RGtk2-2.20.23/RGtk2/src/gobject.c | 31 ++++++++-----
RGtk2-2.20.23/RGtk2/src/gtkClasses.c | 6 +-
RGtk2-2.20.23/RGtk2/src/gtkFuncs.c | 30 ++++++-------
26 files changed, 150 insertions(+), 167 deletions(-)
Title: Reads mass spectrometry data in mzXML format
Diff between readMzXmlData versions 2.2.1 dated 2012-03-09 and 2.3 dated 2012-05-06
Description: Functions for reading mass spectrometry data in mzXML
format.
Author: Sebastian Gibb, Jarek Tuszynski
Maintainer: Sebastian Gibb
DESCRIPTION | 8 ++++----
MD5 | 10 +++++-----
NEWS | 4 ++++
R/mqReadMzXml.R | 6 +-----
man/mqReadMzXml.Rd | 7 ++-----
man/readMzXmlData-package.Rd | 4 ++--
6 files changed, 18 insertions(+), 21 deletions(-)
Title: Reads mass spectrometry data in Bruker *flex format
Diff between readBrukerFlexData versions 1.2.7 dated 2012-03-09 and 1.3 dated 2012-05-06
More information about readBrukerFlexData at CRAN
Description: Reads files generated by MALDI-TOF MS of Bruker Daltonics'
*flex series. Successfully tested for Bruker Daltonics'
Autoflex MS.
Author: Sebastian Gibb
Maintainer: Sebastian Gibb
DESCRIPTION | 8 ++++----
MD5 | 14 +++++++-------
NEWS | 5 +++++
R/mqReadBrukerFlex.R | 14 +++++---------
R/readBrukerFlexData.R | 7 ++-----
man/double2singlePrecision.Rd | 3 +--
man/mqReadBrukerFlex.Rd | 7 ++-----
man/readBrukerFlexData-package.Rd | 4 ++--
8 files changed, 28 insertions(+), 34 deletions(-)
Permanent link
Title: Rigorous - DICOM Input / Output
Diff between oro.dicom versions 0.3.3 dated 2011-12-27 and 0.3.5 dated 2012-05-06
Description: Data input/output functions for data that conform to the
Digital Imaging and Communications in Medicine (DICOM)
standard, part of the Rigorous Analytics bundle.
Author: Brandon Whitcher
Maintainer: Brandon Whitcher
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.000.dcm |only
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.001.dcm |only
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.002.dcm |only
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.003.dcm |only
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.004.dcm |only
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.005.dcm |only
oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.006.dcm |only
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oro.dicom-0.3.3/oro.dicom/inst/hk-40/MR_HARIKRISHNAN__69_M.040.dcm |only
oro.dicom-0.3.5/oro.dicom/DESCRIPTION | 18 -
oro.dicom-0.3.5/oro.dicom/MD5 | 65 +-----
oro.dicom-0.3.5/oro.dicom/R/create.R | 22 --
oro.dicom-0.3.5/oro.dicom/R/dicom.R | 107 +++++++---
oro.dicom-0.3.5/oro.dicom/R/zzz.R | 6
oro.dicom-0.3.5/oro.dicom/data/dicom.VR.rda |binary
oro.dicom-0.3.5/oro.dicom/data/dicom.VR.txt.gz |binary
oro.dicom-0.3.5/oro.dicom/data/dicom.dic.rda |binary
oro.dicom-0.3.5/oro.dicom/inst/doc |only
oro.dicom-0.3.5/oro.dicom/inst/hk-40/hk40.RData |only
oro.dicom-0.3.5/oro.dicom/man/create.Rd | 23 +-
oro.dicom-0.3.5/oro.dicom/man/readDICOMFile.Rd | 4
oro.dicom-0.3.5/oro.dicom/tests/Examples/oro.dicom-Ex.Rout.save | 80 +++++--
oro.dicom-0.3.5/oro.dicom/vignettes |only
54 files changed, 186 insertions(+), 139 deletions(-)
Title: Quantitative Analysis of Mass Spectrometric Data
Diff between MALDIquant versions 1.0 dated 2012-03-28 and 1.1 dated 2012-05-06
Description: MALDIquant provides a complete analysis pipeline for
MALDI-TOF and other mass spectrometric data. Distinctive
features include baseline subtraction using the SNIP algorithm,
peak alignment using warping functions, handling of replicated
measurements as well as allowing spectra with different
resolutions.
Author: Sebastian Gibb
Maintainer: Sebastian Gibb
MALDIquant-1.0/MALDIquant/R/calibrate-functions.R |only
MALDIquant-1.0/MALDIquant/data/peaks.RData |only
MALDIquant-1.0/MALDIquant/data/spectra.RData |only
MALDIquant-1.0/MALDIquant/man/calibrate-functions.Rd |only
MALDIquant-1.0/MALDIquant/man/findLocalMaxima-methods.Rd |only
MALDIquant-1.0/MALDIquant/man/peaks.Rd |only
MALDIquant-1.0/MALDIquant/man/spectra.Rd |only
MALDIquant-1.1/MALDIquant/DESCRIPTION | 8
MALDIquant-1.1/MALDIquant/MD5 | 122 +++++-----
MALDIquant-1.1/MALDIquant/NAMESPACE | 4
MALDIquant-1.1/MALDIquant/NEWS | 27 +-
MALDIquant-1.1/MALDIquant/R/AllGenerics.R | 34 ++
MALDIquant-1.1/MALDIquant/R/binPeaks-functions.R | 7
MALDIquant-1.1/MALDIquant/R/calibrate-methods.R |only
MALDIquant-1.1/MALDIquant/R/detectPeaks-methods.R | 59 ++--
MALDIquant-1.1/MALDIquant/R/determineWarpingFunctions-functions.R | 10
MALDIquant-1.1/MALDIquant/R/doByLabels-functions.R | 5
MALDIquant-1.1/MALDIquant/R/estimateNoise-methods.R | 8
MALDIquant-1.1/MALDIquant/R/filterPeaks-functions.R | 6
MALDIquant-1.1/MALDIquant/R/findEmptyMassObjects-functions.R | 5
MALDIquant-1.1/MALDIquant/R/findLocalMaxima-methods.R | 2
MALDIquant-1.1/MALDIquant/R/intensity-methods.R | 5
MALDIquant-1.1/MALDIquant/R/intensityMatrix-functions.R | 13 -
MALDIquant-1.1/MALDIquant/R/isEmpty-methods.R | 6
MALDIquant-1.1/MALDIquant/R/isMassObjectList-functions.R | 34 ++
MALDIquant-1.1/MALDIquant/R/labelPeaks-methods.R | 13 -
MALDIquant-1.1/MALDIquant/R/mass-methods.R | 5
MALDIquant-1.1/MALDIquant/R/merge-functions.R | 16 -
MALDIquant-1.1/MALDIquant/R/plot-methods.R | 14 -
MALDIquant-1.1/MALDIquant/R/referencePeaks-functions.R | 7
MALDIquant-1.1/MALDIquant/R/removeBaseline-methods.R | 23 +
MALDIquant-1.1/MALDIquant/R/removeEmptyMassObjects-functions.R | 5
MALDIquant-1.1/MALDIquant/R/replaceNonEmptyMassObjects-functions.R | 10
MALDIquant-1.1/MALDIquant/R/show-methods.R | 6
MALDIquant-1.1/MALDIquant/R/standardizeTotalIonCurrent-methods.R |only
MALDIquant-1.1/MALDIquant/R/totalIonCurrent-methods.R |only
MALDIquant-1.1/MALDIquant/R/transformIntensity-methods.R | 10
MALDIquant-1.1/MALDIquant/R/warp-functions.R | 17 -
MALDIquant-1.1/MALDIquant/data/fiedler2009subset.RData |only
MALDIquant-1.1/MALDIquant/demo/baseline.R | 4
MALDIquant-1.1/MALDIquant/demo/peaks.R | 4
MALDIquant-1.1/MALDIquant/demo/warping.R | 14 -
MALDIquant-1.1/MALDIquant/demo/workflow.R | 12
MALDIquant-1.1/MALDIquant/man/AbstractMassObject-class.Rd | 27 +-
MALDIquant-1.1/MALDIquant/man/MALDIquant-internal.Rd | 10
MALDIquant-1.1/MALDIquant/man/MALDIquant-package.Rd | 18 -
MALDIquant-1.1/MALDIquant/man/MassSpectrum-class.Rd | 6
MALDIquant-1.1/MALDIquant/man/binPeaks-functions.Rd | 2
MALDIquant-1.1/MALDIquant/man/calibrate-methods.Rd |only
MALDIquant-1.1/MALDIquant/man/createMassPeaks.Rd | 8
MALDIquant-1.1/MALDIquant/man/createMassSpectrum.Rd | 8
MALDIquant-1.1/MALDIquant/man/detectPeaks-methods.Rd | 55 +++-
MALDIquant-1.1/MALDIquant/man/determineWarpingFunctions-functions.Rd | 33 ++
MALDIquant-1.1/MALDIquant/man/estimateBaseline-methods.Rd | 6
MALDIquant-1.1/MALDIquant/man/estimateBaselineConvexHull-functions.Rd | 4
MALDIquant-1.1/MALDIquant/man/estimateBaselineMedian.Rd | 4
MALDIquant-1.1/MALDIquant/man/estimateBaselineSnip-functions.Rd | 4
MALDIquant-1.1/MALDIquant/man/estimateNoise-methods.Rd | 22 -
MALDIquant-1.1/MALDIquant/man/fiedler2009subset.Rd |only
MALDIquant-1.1/MALDIquant/man/filterPeaks-functions.Rd | 2
MALDIquant-1.1/MALDIquant/man/intensityMatrix-functions.Rd | 11
MALDIquant-1.1/MALDIquant/man/isMassObjectList-functions.Rd | 2
MALDIquant-1.1/MALDIquant/man/labelPeaks-methods.Rd | 8
MALDIquant-1.1/MALDIquant/man/merge-functions.Rd | 2
MALDIquant-1.1/MALDIquant/man/referencePeaks-functions.Rd | 2
MALDIquant-1.1/MALDIquant/man/removeBaseline-methods.Rd | 49 +++-
MALDIquant-1.1/MALDIquant/man/standardizeTotalIonCurrent-methods.Rd |only
MALDIquant-1.1/MALDIquant/man/transformIntensity-methods.Rd | 11
MALDIquant-1.1/MALDIquant/man/warp-functions.Rd | 13 -
69 files changed, 483 insertions(+), 339 deletions(-)
Title: Julian Miscellaneous Function
Diff between Jmisc versions 0.2 dated 2012-03-15 and 0.3 dated 2012-05-06
Description: Some handy function in R
Author: TszKin Julian Chan
Maintainer: TszKin Julian Chan
ChangeLog | 2 +-
DESCRIPTION | 6 +++---
MD5 | 16 ++++++++++++----
NAMESPACE | 4 ++++
R/charPlus.r |only
R/demean.r |only
R/generateSignificance.r |only
R/sourceAll.r | 1 +
R/splitBy.r |only
man/charPlus.Rd |only
man/demean.Rd |only
man/generateSignificance.Rd |only
man/splitBy.Rd |only
13 files changed, 21 insertions(+), 8 deletions(-)
Title: Generalized additive mixed model analysis via slice sampling
Diff between gammSlice versions 1.2-5 dated 2012-04-04 and 1.2-6 dated 2012-05-06
Description: Uses a slice sampling-based Markov chain Monte Carlo to
conduct Bayesian fitting and inference for generalized additive
mixed models (GAMM). Generalized linear mixed models and
generalized additive models are also handled as special cases
of GAMM.
Author: Tung Pham and Matt Wand
Maintainer: Tung Pham
DESCRIPTION | 8 ++++----
MD5 | 11 ++++++-----
NAMESPACE | 2 +-
R/gSlc.R | 23 +++++++++++------------
R/gSlcMCMC.R | 5 +++--
R/plot.gSlc.R | 10 +++++-----
src/gammslice.f |only
7 files changed, 30 insertions(+), 29 deletions(-)
Title: Constrained L1-minimization for Inverse (covariance) Matrix
Estimation
Diff between clime versions 0.3 dated 2011-07-23 and 0.4.1 dated 2012-05-06
Description: A robust constrained L1 minimization method for estimating
a large sparse inverse covariance matrix (aka precision
matrix), and recovering its support for building graphical
models. The computation uses linear programming.
Author: T. Tony Cai, Weidong Liu and Xi (Rossi) Luo
Maintainer: Xi (Rossi) Luo
ChangeLog | 13 +++++++++++--
DESCRIPTION | 9 +++++----
MD5 |only
R/clime.R | 8 ++++++--
man/clime-internal.Rd | 4 ++--
man/clime.Rd | 8 ++++----
man/cv.clime.Rd | 4 ++--
man/print.clime.Rd | 5 ++---
man/print.cv.clime.Rd | 4 ++--
9 files changed, 34 insertions(+), 21 deletions(-)
Title: Download content from NCBI databases
Diff between RISmed versions 1.2.3 dated 2011-07-04 and 2.0 dated 2012-05-06
Description: Download content from NCBI databases. This package is
intended to facilitate analyses of NCBI database content. This
package is not intended for reference management.
Author: Stephanie Kovalchik
Maintainer: S. A. Kovalchik
RISmed-1.2.3/RISmed/R/RISmed-internal.R |only
RISmed-1.2.3/RISmed/R/cite.R |only
RISmed-1.2.3/RISmed/R/pubmed.search.R |only
RISmed-1.2.3/RISmed/R/read.ris.R |only
RISmed-1.2.3/RISmed/R/reference_methods.R |only
RISmed-1.2.3/RISmed/data/R2009.RData |only
RISmed-1.2.3/RISmed/development.txt |only
RISmed-1.2.3/RISmed/man/R2009.Rd |only
RISmed-1.2.3/RISmed/man/Reference-class.Rd |only
RISmed-1.2.3/RISmed/man/abstract.Rd |only
RISmed-1.2.3/RISmed/man/as.data.frame.Rd |only
RISmed-1.2.3/RISmed/man/cite.Rd |only
RISmed-1.2.3/RISmed/man/keyword.Rd |only
RISmed-1.2.3/RISmed/man/pubmed.search.Rd |only
RISmed-1.2.3/RISmed/man/read.ris.Rd |only
RISmed-2.0/RISmed/DESCRIPTION | 17 +++++++++--------
RISmed-2.0/RISmed/MD5 |only
RISmed-2.0/RISmed/NAMESPACE | 8 +++-----
RISmed-2.0/RISmed/NEWS |only
RISmed-2.0/RISmed/R/AllGenerics.R |only
RISmed-2.0/RISmed/R/EUtils.R |only
RISmed-2.0/RISmed/R/EUtilsSummary.R |only
RISmed-2.0/RISmed/data/myeloma.RData |only
RISmed-2.0/RISmed/man/EUtilsGet.Rd |only
RISmed-2.0/RISmed/man/EUtilsQuery.Rd |only
RISmed-2.0/RISmed/man/EUtilsSummary-class.Rd |only
RISmed-2.0/RISmed/man/EUtilsSummary.Rd |only
RISmed-2.0/RISmed/man/RISmed-package.Rd | 9 ++++-----
RISmed-2.0/RISmed/man/count.Rd |only
RISmed-2.0/RISmed/man/id.Rd |only
RISmed-2.0/RISmed/man/myeloma.Rd |only
RISmed-2.0/RISmed/man/print.Rd |only
RISmed-2.0/RISmed/man/show-methods.Rd | 10 +++++-----
RISmed-2.0/RISmed/man/summary-methods.Rd | 10 +++++-----
RISmed-2.0/RISmed/man/translation.Rd |only
35 files changed, 26 insertions(+), 28 deletions(-)
Title: OpenCPU Demo apps.
Diff between opencpu.demo versions 0.4-9 dated 2012-04-13 and 0.4-10 dated 2012-05-06
Description: Some demo R functions and apps for the OpenCPU framework.
See http://www.opencpu.org for more details.
Author: Jeroen Ooms and others as specified in the manual page.
Maintainer: Jeroen Ooms
opencpu.demo-0.4-10/opencpu.demo/DESCRIPTION | 10 +++++-----
opencpu.demo-0.4-10/opencpu.demo/MD5 | 9 +++++----
opencpu.demo-0.4-10/opencpu.demo/NAMESPACE | 1 +
opencpu.demo-0.4-10/opencpu.demo/R/gitstats.R |only
opencpu.demo-0.4-10/opencpu.demo/R/install.verbose.R | 3 +--
opencpu.demo-0.4-10/opencpu.demo/man/gitstats.Rd |only
opencpu.demo-0.4-9/opencpu.demo/opencpu.demo-Ex.R |only
7 files changed, 12 insertions(+), 11 deletions(-)
Title: Tools for nonlinear regression diagnostics
Diff between nlstools versions 0.0-11 dated 2011-04-24 and 0.0-12 dated 2012-05-06
Description: Several tools for assessing the quality of fit of a
gaussian nonlinear model are provided.
Author: Florent Baty
Maintainer: Florent Baty
ChangeLog | 10
DESCRIPTION | 10
MD5 |only
NAMESPACE |only
R/First.lib.R | 8
R/nlsContourRSS.R | 4
R/nlstools.R | 7
inst/doc/nlstools_vignette.Rnw | 472 ++++++++++++++++++++---------------------
inst/doc/nlstools_vignette.pdf |binary
man/nlsContourRSS.Rd | 3
10 files changed, 259 insertions(+), 255 deletions(-)
Title: Minimal Free Resolutions of Graph Edge Ideals
Diff between mfr versions 1.02.00 dated 2012-02-24 and 1.03 dated 2012-05-06
Description: Algebraic Geometry: Minimal Free Resolutions of the Edge
Ideal of a Graph
Author: David J. Marchette,
Maintainer: David J. Marchette,
mfr-1.02.00/mfr/R/bars.R |only
mfr-1.03/mfr/DESCRIPTION | 17 ++--
mfr-1.03/mfr/MD5 | 101 +++++++++++++++++---------
mfr-1.03/mfr/NAMESPACE | 19 ++++
mfr-1.03/mfr/R/barbell.R |only
mfr-1.03/mfr/R/binomial.R |only
mfr-1.03/mfr/R/clique.R |only
mfr-1.03/mfr/R/comb.R |only
mfr-1.03/mfr/R/complement.R |only
mfr-1.03/mfr/R/conc.R |only
mfr-1.03/mfr/R/count.R |only
mfr-1.03/mfr/R/db.R |only
mfr-1.03/mfr/R/directed2bipartite.R |only
mfr-1.03/mfr/R/kidney.R | 50 +++---------
mfr-1.03/mfr/R/mfr.R | 53 ++++++++++---
mfr-1.03/mfr/R/partial.R |only
mfr-1.03/mfr/R/product.R |only
mfr-1.03/mfr/R/rchordal.R | 3
mfr-1.03/mfr/R/rdpg.R |only
mfr-1.03/mfr/R/scan.R | 92 ++++++++++++++++-------
mfr-1.03/mfr/R/singular.R | 15 +++
mfr-1.03/mfr/R/specialcases.R | 77 ++++++++++++++-----
mfr-1.03/mfr/R/star.R |only
mfr-1.03/mfr/R/trunc.R |only
mfr-1.03/mfr/TODO |only
mfr-1.03/mfr/data |only
mfr-1.03/mfr/inst |only
mfr-1.03/mfr/man/Star.Rd |only
mfr-1.03/mfr/man/checkDB.Rd |only
mfr-1.03/mfr/man/chordal.comp.mfr.Rd |only
mfr-1.03/mfr/man/clique.expand.Rd |only
mfr-1.03/mfr/man/count.bars.Rd | 29 +++++--
mfr-1.03/mfr/man/create.mfr.database.Rd |only
mfr-1.03/mfr/man/directed2bipartite.Rd |only
mfr-1.03/mfr/man/estimate.mfr.time.Rd |only
mfr-1.03/mfr/man/graph.barbell.Rd |only
mfr-1.03/mfr/man/is.chordal.Rd | 2
mfr-1.03/mfr/man/isolates.Rd | 2
mfr-1.03/mfr/man/kidneyEgg.Rd | 2
mfr-1.03/mfr/man/layout.concentric.circles.Rd |only
mfr-1.03/mfr/man/mfr.Rd | 47 +++++++++---
mfr-1.03/mfr/man/mfrBinomialEdge.Rd |only
mfr-1.03/mfr/man/mfrDB.Rd |only
mfr-1.03/mfr/man/partial.Rd |only
mfr-1.03/mfr/man/product.game.Rd |only
mfr-1.03/mfr/man/rchordal.Rd | 2
mfr-1.03/mfr/man/rdpg.game.Rd |only
mfr-1.03/mfr/man/rtree.Rd | 2
mfr-1.03/mfr/man/scanMFR.Rd | 30 ++++++-
mfr-1.03/mfr/man/singular.Rd | 31 ++++++-
mfr-1.03/mfr/man/specialcases.Rd | 10 +-
mfr-1.03/mfr/man/splittingEdge.Rd | 2
mfr-1.03/mfr/man/timings.Rd | 2
mfr-1.03/mfr/man/truncated.tetrahedron.Rd |only
mfr-1.03/mfr/man/undocumented.Rd |only
mfr-1.03/mfr/src/bipartite.c | 2
mfr-1.03/mfr/src/chordalcomp.c |only
mfr-1.03/mfr/src/complete.c | 2
mfr-1.03/mfr/src/component.c | 3
mfr-1.03/mfr/src/cycle.c | 5 -
mfr-1.03/mfr/src/db.c |only
mfr-1.03/mfr/src/empty.c | 2
mfr-1.03/mfr/src/make.c | 5 -
mfr-1.03/mfr/src/mfr.c | 9 +-
mfr-1.03/mfr/src/singular.c | 18 ++--
mfr-1.03/mfr/src/splitting.c | 25 ++++++
mfr-1.03/mfr/src/splitting.h | 5 +
mfr-1.03/mfr/src/star.c | 2
68 files changed, 471 insertions(+), 195 deletions(-)
Title: Methods that apply to rows and columns of a matrix
Diff between matrixStats versions 0.4.4 dated 2012-03-06 and 0.5.0 dated 2012-05-06
Description: This packages provides methods operating on rows and
columns of matrices. The objective is to have all methods
being optimized for speed and memory consumption.
Author: Henrik Bengtsson, Hector Corrada Bravo, Robert Gentleman,
Harris Jaffee
Maintainer: Henrik Bengtsson
matrixStats-0.4.4/matrixStats/src/.HIDE |only
matrixStats-0.5.0/matrixStats/DESCRIPTION | 14 ++--
matrixStats-0.5.0/matrixStats/MD5 | 34 +++++-----
matrixStats-0.5.0/matrixStats/NAMESPACE | 2
matrixStats-0.5.0/matrixStats/R/rowMads.R | 12 +--
matrixStats-0.5.0/matrixStats/R/rowOrderStats.R | 2
matrixStats-0.5.0/matrixStats/R/rowRanks.R | 2
matrixStats-0.5.0/matrixStats/R/rowSds.R | 8 +-
matrixStats-0.5.0/matrixStats/R/rowWeightedMedians.matrix.R | 24 ++-----
matrixStats-0.5.0/matrixStats/R/weightedMad.R |only
matrixStats-0.5.0/matrixStats/R/weightedMedian.R |only
matrixStats-0.5.0/matrixStats/incl/weightedMad.Rex |only
matrixStats-0.5.0/matrixStats/incl/weightedMedian.Rex |only
matrixStats-0.5.0/matrixStats/inst/NEWS | 15 ++++
matrixStats-0.5.0/matrixStats/man/matrixStats-package.Rd | 2
matrixStats-0.5.0/matrixStats/man/rowOrderStats.Rd | 2
matrixStats-0.5.0/matrixStats/man/rowRanks.Rd | 2
matrixStats-0.5.0/matrixStats/man/rowSds.Rd | 6 -
matrixStats-0.5.0/matrixStats/man/rowWeightedMedians.matrix.Rd | 11 +--
matrixStats-0.5.0/matrixStats/man/weightedMad.Rd |only
matrixStats-0.5.0/matrixStats/man/weightedMedian.Rd |only
matrixStats-0.5.0/matrixStats/tests/rowWeightedMedians.R | 2
22 files changed, 77 insertions(+), 61 deletions(-)
Title: R companion to "Curve and Surface Fitting with Splines"
Diff between DierckxSpline versions 1.1-4 dated 2009-11-01 and 1.1-5 dated 2012-05-06
Description: This package provides a wrapper to the FITPACK routines
written by Paul Dierckx. The original Fortran is available from
http://www.netlib.org/dierckx 2012.02.15: This package is
broken. Currently, it seems NOT to have any users and is not
worth fixing. Dierckx's FITPACK is over 20 years old and seems
to be obsolete. If you want to fix it, I'm happy to make you
the maintainer. Spencer Graves
Author: Sundar Dorai-Raj and Spencer Graves
Maintainer: Spencer Graves
DierckxSpline-1.1-4/DierckxSpline/data/cam.txt |only
DierckxSpline-1.1-4/DierckxSpline/data/knee.txt |only
DierckxSpline-1.1-4/DierckxSpline/data/moisture.txt |only
DierckxSpline-1.1-4/DierckxSpline/data/titanium.txt |only
DierckxSpline-1.1-5/DierckxSpline/DESCRIPTION | 14 +++++++++-----
DierckxSpline-1.1-5/DierckxSpline/MD5 |only
DierckxSpline-1.1-5/DierckxSpline/data/cam.txt.gz |only
DierckxSpline-1.1-5/DierckxSpline/data/knee.txt.gz |only
DierckxSpline-1.1-5/DierckxSpline/data/moisture.txt.gz |only
DierckxSpline-1.1-5/DierckxSpline/data/titanium.txt.gz |only
DierckxSpline-1.1-5/DierckxSpline/man/concon.Rd | 9 +++++----
DierckxSpline-1.1-5/DierckxSpline/man/moisture.Rd | 3 ++-
12 files changed, 16 insertions(+), 10 deletions(-)