Title: Global optimization by Differential Evolution
Diff between DEoptim versions 2.2-0 dated 2012-04-06 and 2.2-1 dated 2012-07-01
Description: This package provides the DEoptim function which performs
global optimization by differential evolution.
Author: David Ardia, Katharine Mullen, Brian Peterson, Joshua Ulrich
Maintainer: Katharine Mullen
DESCRIPTION | 6 +++---
MD5 | 6 +++---
NEWS | 3 +++
src/evaluate.c | 24 ++++++++++--------------
4 files changed, 19 insertions(+), 20 deletions(-)
Title: Sensitivity Analysis
Diff between sensitivity versions 1.4-0 dated 2008-07-15 and 1.4-1 dated 2012-07-01
Description: A collection of functions for factor screening and global
sensitivity analysis of model output.
Author: Gilles Pujol
Maintainer: Bertrand Iooss
sensitivity-1.4-0/sensitivity/R/morris_simplex.R |only
sensitivity-1.4-1/sensitivity/DESCRIPTION | 16 +++++++++-------
sensitivity-1.4-1/sensitivity/MD5 |only
sensitivity-1.4-1/sensitivity/R/morris_oat.R | 2 +-
sensitivity-1.4-1/sensitivity/R/morris_sfd.R | 4 ++--
sensitivity-1.4-1/sensitivity/R/simplex.R |only
sensitivity-1.4-1/sensitivity/R/src.R | 2 +-
sensitivity-1.4-1/sensitivity/man/pcc.Rd | 3 ---
sensitivity-1.4-1/sensitivity/man/sobol.Rd | 3 ---
sensitivity-1.4-1/sensitivity/man/sobol2002.Rd | 3 ---
sensitivity-1.4-1/sensitivity/man/src.Rd | 3 ---
sensitivity-1.4-1/sensitivity/man/template_replace.Rd | 3 ---
12 files changed, 13 insertions(+), 26 deletions(-)
Title: Simple interface to the estimation and plotting of IRT models
Diff between irtoys versions 0.1.4 dated 2011-06-23 and 0.1.5 dated 2012-07-01
Description: Provides a simple common interface to the estimation of
item parameters in IRT models for binary responses with three
different programs (ICL, BILOG-MG, and ltm, and a variety of
functions useful with IRT models.
Author: Ivailo Partchev
Maintainer: Ivailo Partchev
irtoys-0.1.4/irtoys/R/irtoys.R |only
irtoys-0.1.4/irtoys/man/internal.Rd |only
irtoys-0.1.4/irtoys/man/irtoys.package.Rd |only
irtoys-0.1.5/irtoys/DESCRIPTION | 12 -
irtoys-0.1.5/irtoys/MD5 |only
irtoys-0.1.5/irtoys/NAMESPACE |only
irtoys-0.1.5/irtoys/R/ability.R |only
irtoys-0.1.5/irtoys/R/estimate.R |only
irtoys-0.1.5/irtoys/R/irtoys-package.R |only
irtoys-0.1.5/irtoys/R/itemfit.R |only
irtoys-0.1.5/irtoys/R/nonpar.R |only
irtoys-0.1.5/irtoys/R/readin.R |only
irtoys-0.1.5/irtoys/R/scale.R |only
irtoys-0.1.5/irtoys/R/tracelines.R |only
irtoys-0.1.5/irtoys/R/utils.R |only
irtoys-0.1.5/irtoys/man/Scored.Rd | 20 +-
irtoys-0.1.5/irtoys/man/Unscored.Rd | 29 +--
irtoys-0.1.5/irtoys/man/api.Rd | 60 ++++--
irtoys-0.1.5/irtoys/man/dpv.Rd | 71 ++++---
irtoys-0.1.5/irtoys/man/eap.Rd | 67 ++++---
irtoys-0.1.5/irtoys/man/est.Rd | 275 +++++++++++++++++-------------
irtoys-0.1.5/irtoys/man/grp.Rd | 82 +++++---
irtoys-0.1.5/irtoys/man/iif.Rd | 85 +++++----
irtoys-0.1.5/irtoys/man/irf.Rd | 101 ++++++-----
irtoys-0.1.5/irtoys/man/irtoys-package.Rd |only
irtoys-0.1.5/irtoys/man/itf.Rd | 247 ++++++++++++++------------
irtoys-0.1.5/irtoys/man/l2m.Rd | 44 ++--
irtoys-0.1.5/irtoys/man/mlebme.Rd | 75 +++++---
irtoys-0.1.5/irtoys/man/normal.qu.Rd | 74 ++++----
irtoys-0.1.5/irtoys/man/npp.Rd | 117 +++++++-----
irtoys-0.1.5/irtoys/man/plot.iif.Rd | 74 ++++----
irtoys-0.1.5/irtoys/man/plot.irf.Rd | 74 ++++----
irtoys-0.1.5/irtoys/man/plot.tif.Rd | 62 ++++--
irtoys-0.1.5/irtoys/man/plot.trf.Rd | 62 ++++--
irtoys-0.1.5/irtoys/man/qrs.Rd | 60 +++---
irtoys-0.1.5/irtoys/man/read.ip.bilog.Rd | 53 +++--
irtoys-0.1.5/irtoys/man/read.ip.icl.Rd | 53 +++--
irtoys-0.1.5/irtoys/man/read.qu.icl.Rd | 55 +++---
irtoys-0.1.5/irtoys/man/read.resp.Rd | 97 +++++-----
irtoys-0.1.5/irtoys/man/sca.Rd | 134 ++++++++------
irtoys-0.1.5/irtoys/man/sco.Rd | 55 +++---
irtoys-0.1.5/irtoys/man/scp.Rd | 69 ++++---
irtoys-0.1.5/irtoys/man/sim.Rd | 53 +++--
irtoys-0.1.5/irtoys/man/tgp.Rd | 81 +++++---
irtoys-0.1.5/irtoys/man/tia.Rd |only
irtoys-0.1.5/irtoys/man/tif.Rd | 81 ++++----
irtoys-0.1.5/irtoys/man/trf.Rd | 78 ++++----
irtoys-0.1.5/irtoys/man/tsc.Rd | 65 ++++---
irtoys-0.1.5/irtoys/man/wle.Rd | 69 ++++---
49 files changed, 1529 insertions(+), 1105 deletions(-)
Title: Weighted rank aggregation
Diff between RankAggreg versions 0.4-2 dated 2011-01-25 and 0.4-3 dated 2012-07-01
Description: This package performs aggregation of ordered lists based
on the ranks using several different algorithms: Borda count,
Cross-Entropy Monte Carlo algorithm, Genetic algorithm, and a
brute force algorithm (for small problems)
Author: Vasyl Pihur
Maintainer: Vasyl Pihur
RankAggreg-0.4-2/RankAggreg/inst/doc/Sweave.sty |only
RankAggreg-0.4-2/RankAggreg/inst/doc/fancyvrb.sty |only
RankAggreg-0.4-3/RankAggreg/ChangeLog | 4 ++++
RankAggreg-0.4-3/RankAggreg/DESCRIPTION | 12 ++++++------
RankAggreg-0.4-3/RankAggreg/MD5 |only
RankAggreg-0.4-3/RankAggreg/inst/doc/RankAggreg.Rnw | 2 +-
RankAggreg-0.4-3/RankAggreg/inst/doc/RankAggreg.pdf |binary
RankAggreg-0.4-3/RankAggreg/man/plot.raggr.Rd | 2 +-
8 files changed, 12 insertions(+), 8 deletions(-)
Title: Import articles from Factiva using the tm text mining framework
Diff between tm.plugin.factiva versions 1.0 dated 2012-05-14 and 1.1 dated 2012-07-01
More information about tm.plugin.factiva at CRAN
Description: This package provides a tm Source to create corpora from
articles exported from the Dow Jones Factiva content provider
as XML or HTML files. It is able to read both text content and
meta-data information.
Author: Milan Bouchet-Valat [aut, cre]
Maintainer: Milan Bouchet-Valat
tm.plugin.factiva-1.0/tm.plugin.factiva/R/readFactiva.R |only
tm.plugin.factiva-1.1/tm.plugin.factiva/DESCRIPTION | 22 ++--
tm.plugin.factiva-1.1/tm.plugin.factiva/MD5 | 15 +--
tm.plugin.factiva-1.1/tm.plugin.factiva/NAMESPACE | 8 +
tm.plugin.factiva-1.1/tm.plugin.factiva/NEWS |only
tm.plugin.factiva-1.1/tm.plugin.factiva/R/FactivaSource.R | 36 ++++++-
tm.plugin.factiva-1.1/tm.plugin.factiva/R/readFactivaHTML.R |only
tm.plugin.factiva-1.1/tm.plugin.factiva/R/readFactivaXML.R |only
tm.plugin.factiva-1.1/tm.plugin.factiva/inst/factiva_test.html |only
tm.plugin.factiva-1.1/tm.plugin.factiva/man/FactivaSource.Rd | 47 ++++++++--
tm.plugin.factiva-1.1/tm.plugin.factiva/man/readFactiva.Rd | 10 +-
11 files changed, 101 insertions(+), 37 deletions(-)
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2009-04-01 0.5.0
2008-03-28 0.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-05-09 1.0-2
2011-02-03 1.0-1
2011-01-30 1.0-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2005-06-24 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-05-03 1.0.7
2011-04-29 1.0.6
2011-04-23 1.0.5
2011-04-10 1.0.3
2011-04-05 1.0.2
2011-04-04 1.0.1
2011-04-01 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2009-04-01 0.5.0
2008-03-28 0.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-10-14 0.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-02-20 0.8-4
2012-02-17 0.8-3
2012-01-27 0.8-2
Title: Phylogenetic analysis in R
Diff between phangorn versions 1.6-0 dated 2012-04-05 and 1.6-3 dated 2012-07-01
Description: Phylogenetic analysis in R (Estimation of phylogenetic
trees and networks using Maximum Likelihood, Maximum Parsimony,
Distance methods & Hadamard conjugation)
Author: Klaus Schliep, Emmanuel Paradis
Maintainer: Klaus Schliep
phangorn-1.6-0/phangorn/inst/doc/Ancestral.Rnw |only
phangorn-1.6-3/phangorn/DESCRIPTION | 10
phangorn-1.6-3/phangorn/MD5 | 25
phangorn-1.6-3/phangorn/NAMESPACE | 6
phangorn-1.6-3/phangorn/NEWS | 16
phangorn-1.6-3/phangorn/R/phylo.R | 625 +++++------------
phangorn-1.6-3/phangorn/inst/doc/Ancestral.pdf |binary
phangorn-1.6-3/phangorn/inst/doc/Trees.Rnw | 6
phangorn-1.6-3/phangorn/inst/doc/Trees.pdf |binary
phangorn-1.6-3/phangorn/inst/doc/phangorn-specials.pdf |binary
phangorn-1.6-3/phangorn/man/parsimony.Rd | 29
phangorn-1.6-3/phangorn/man/pml.Rd | 4
phangorn-1.6-3/phangorn/src/Makevars | 5
phangorn-1.6-3/phangorn/src/phangorn.c | 306 ++++----
14 files changed, 435 insertions(+), 597 deletions(-)
Title: Estimation for multivariate normal and Student-t data with
monotone missingness
Diff between monomvn versions 1.9-1 dated 2012-06-25 and 1.9-2 dated 2012-07-01
Description: Estimation of multivariate normal and student-t data of
arbitrary dimension where the pattern of missing data is
monotone. Through the use of parsimonious/shrinkage
regressions (plsr, pcr, lasso, ridge, etc.), where standard
regressions fail, the package can handle a nearly arbitrary
amount of missing data. The current version supports maximum
likelihood inference and a full Bayesian approach employing
scale-mixtures for Gibbs sampling. Monotone data augmentation
extends this Bayesian approach to arbitrary missingness
patterns. A fully functional standalone interface to the
Bayesian lasso (from Park & Casella), Normal-Gamma (from
Griffin & Brown), Horseshoe (from Carvalho, Polson, & Scott),
and ridge regression with model selection via Reversible Jump,
and student-t errors (from Geweke) is also provided
Author: Robert B. Gramacy
Maintainer: Robert B. Gramacy
monomvn-1.9-1/monomvn/R/posdef.approx.R |only
monomvn-1.9-1/monomvn/man/posdef.approx.Rd |only
monomvn-1.9-2/monomvn/ChangeLog | 8 +++++++-
monomvn-1.9-2/monomvn/DESCRIPTION | 10 +++++-----
monomvn-1.9-2/monomvn/MD5 | 12 +++++-------
monomvn-1.9-2/monomvn/NAMESPACE | 4 ++--
monomvn-1.9-2/monomvn/R/kl.norm.R | 24 +++++-------------------
monomvn-1.9-2/monomvn/man/metrics.Rd | 1 -
8 files changed, 24 insertions(+), 35 deletions(-)
Title: Read and write of MAT files together with R-to-Matlab
connectivity
Diff between R.matlab versions 1.5.2 dated 2011-11-03 and 1.6.1 dated 2012-07-01
Description: This package provides methods to read and write MAT files.
It also makes it possible to communicate (evaluate code, send
and retrieve objects etc.) with Matlab v6 or higher running
locally or on a remote host.
Author: Henrik Bengtsson
Maintainer: Henrik Bengtsson
DESCRIPTION | 21 +--
MD5 | 27 ++-
NAMESPACE | 4
R/006.fixVarArgs.R | 16 ++
R/Matlab.R | 11 +
R/readMat.R | 207 +++++++++++++++++++++++++-----
incl/readMat.Rex | 125 ------------------
incl/writeMat.Rex | 4
inst/NEWS | 62 ++++++++
inst/mat-files/ABC.mat |only
inst/mat-files/SparseLogicalDouble-v4.mat |only
inst/mat-files/SparseLogicalDouble-v5.mat |only
man/Matlab.Rd | 6
man/readMat.Rd | 126 ------------------
man/writeMat.Rd | 4
tests |only
16 files changed, 309 insertions(+), 304 deletions(-)