Title: Graphical user interface for data mining in R
Diff between rattle versions 2.6.18 dated 2012-04-23 and 2.6.19 dated 2012-07-04
Description: Rattle (the R Analytic Tool To Learn Easily) provides a
Gnome (RGtk2) based interface to R functionality for data
mining. The aim is to provide a simple and intuitive interface
that allows a user to quickly load data from a CSV file (or via
ODBC), transform and explore the data, build and evaluate
models, and export models as PMML (predictive modelling markup
language) or as scores. All of this with knowing little about
R. All R commands are logged and commented through the log tab.
Thus they are available to the user as a script file or as an
aide for the user to learn R or to copy-and-paste directly into
R itself. Rattle also exports a number of utility functions
and the graphical user interface, invoked as rattle(), does not
need to be run to deploy these.
Author: Graham Williams
Maintainer: Graham Williams
DESCRIPTION | 22 ++++-----
MD5 | 45 +++++++++----------
NAMESPACE | 1
R/evaluate.R | 86 ++++++++++++++++++++++++++-----------
R/explore.R | 19 ++++++--
R/projects.R | 23 ++++++---
R/random_forest.R | 20 ++++----
R/rattle.R | 40 ++++++++++++++---
R/rpart.R | 6 +-
R/zzz.R | 4 -
data/audit.RData |binary
data/locationsAUS.RData |binary
data/weather.RData |binary
data/weatherAUS.RData |binary
data/wine.RData |binary
inst/ChangeLog | 29 ++++++++++++
inst/doc/rattle.pdf |binary
inst/po/de/LC_MESSAGES/R-rattle.mo |binary
inst/po/es/LC_MESSAGES/R-rattle.mo |binary
inst/po/fr/LC_MESSAGES/R-rattle.mo |binary
inst/po/ja/LC_MESSAGES/R-rattle.mo |binary
man/fancyRpartPlot.Rd | 6 +-
man/plotRisk.Rd | 4 -
man/riskchart.Rd |only
24 files changed, 211 insertions(+), 94 deletions(-)
More information about beadarrayFilter at CRAN
Permanent link
Title: Batch computing with R.
Diff between BatchJobs versions 1.0-527 dated 2012-06-01 and 1.0-606 dated 2012-07-04
Description: Provides Map, Reduce and Filter variants to generate jobs
on batch computing systems like PBS/Torque, LSF and Sun Grid
Engine. Multicore and SSH systems are also supported. For
further details see the project web page.
Author: Bernd Bischl
Maintainer: Bernd Bischl
BatchJobs-1.0-527/BatchJobs/inst/tests/unittests-files/functions/d02c5358689bb0a9eddc0f38fc0541ae.RData |only
BatchJobs-1.0-606/BatchJobs/DESCRIPTION | 37 ++-
BatchJobs-1.0-606/BatchJobs/MD5 | 99 +++++-----
BatchJobs-1.0-606/BatchJobs/NAMESPACE | 14 +
BatchJobs-1.0-606/BatchJobs/NEWS | 12 +
BatchJobs-1.0-606/BatchJobs/R/Registry.R | 35 +++
BatchJobs-1.0-606/BatchJobs/R/Resources.R |only
BatchJobs-1.0-606/BatchJobs/R/Worker.R | 11 -
BatchJobs-1.0-606/BatchJobs/R/WorkerLinux.R | 32 +--
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsHelpers.R |only
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsInteractive.R | 26 ++
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsLSF.R | 66 ++----
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsMulticore.R | 10 -
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsSGE.R | 56 +----
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsSSH.R | 10 -
BatchJobs-1.0-606/BatchJobs/R/clusterFunctionsTorque.R | 51 +----
BatchJobs-1.0-606/BatchJobs/R/conf.R | 9
BatchJobs-1.0-606/BatchJobs/R/database.R | 12 -
BatchJobs-1.0-606/BatchJobs/R/debugMulticore.R | 10 -
BatchJobs-1.0-606/BatchJobs/R/debugSSH.R | 49 ++--
BatchJobs-1.0-606/BatchJobs/R/doJob.R | 2
BatchJobs-1.0-606/BatchJobs/R/filenames.R | 8
BatchJobs-1.0-606/BatchJobs/R/getLogFiles.R | 2
BatchJobs-1.0-606/BatchJobs/R/grepLogs.R |only
BatchJobs-1.0-606/BatchJobs/R/helpers.R | 44 ++--
BatchJobs-1.0-606/BatchJobs/R/resetJobs.R | 19 +
BatchJobs-1.0-606/BatchJobs/R/submitJobs.R | 52 ++---
BatchJobs-1.0-606/BatchJobs/R/testJob.R | 13 +
BatchJobs-1.0-606/BatchJobs/R/writeRscripts.R | 9
BatchJobs-1.0-606/BatchJobs/R/zzz.R | 7
BatchJobs-1.0-606/BatchJobs/inst/bin/linux-helper | 7
BatchJobs-1.0-606/BatchJobs/inst/tests/test_doJob.R | 2
BatchJobs-1.0-606/BatchJobs/inst/tests/test_grepLogs.R |only
BatchJobs-1.0-606/BatchJobs/inst/tests/test_makeRegistry.R | 12 +
BatchJobs-1.0-606/BatchJobs/inst/tests/test_resetJobs.R | 3
BatchJobs-1.0-606/BatchJobs/inst/tests/test_resources.R |only
BatchJobs-1.0-606/BatchJobs/inst/tests/test_strextract.R |only
BatchJobs-1.0-606/BatchJobs/inst/tests/unittests-files/BatchJobs.db |binary
BatchJobs-1.0-606/BatchJobs/inst/tests/unittests-files/functions/f7bede4596488af19f26f5db58fcfced.RData |only
BatchJobs-1.0-606/BatchJobs/inst/tests/unittests-files/registry.RData |binary
BatchJobs-1.0-606/BatchJobs/man/cfBrewTemplate.Rd |only
BatchJobs-1.0-606/BatchJobs/man/cfHandleUnkownSubmitError.Rd |only
BatchJobs-1.0-606/BatchJobs/man/cfKillBatchJob.Rd |only
BatchJobs-1.0-606/BatchJobs/man/cfReadBrewTemplate.Rd |only
BatchJobs-1.0-606/BatchJobs/man/debugMulticore.Rd | 8
BatchJobs-1.0-606/BatchJobs/man/debugSSH.Rd | 27 +-
BatchJobs-1.0-606/BatchJobs/man/getJobResources.Rd |only
BatchJobs-1.0-606/BatchJobs/man/getResources.Rd |only
BatchJobs-1.0-606/BatchJobs/man/grepLogs.Rd |only
BatchJobs-1.0-606/BatchJobs/man/makeClusterFunctionsInteractive.Rd | 7
BatchJobs-1.0-606/BatchJobs/man/makeClusterFunctionsLSF.Rd | 13 -
BatchJobs-1.0-606/BatchJobs/man/makeClusterFunctionsMulticore.Rd | 6
BatchJobs-1.0-606/BatchJobs/man/makeClusterFunctionsSGE.Rd | 10 -
BatchJobs-1.0-606/BatchJobs/man/makeClusterFunctionsTorque.Rd | 10 -
BatchJobs-1.0-606/BatchJobs/man/makeSSHWorker.Rd | 9
BatchJobs-1.0-606/BatchJobs/man/resetJobs.Rd | 24 +-
BatchJobs-1.0-606/BatchJobs/man/submitJobs.Rd | 28 +-
BatchJobs-1.0-606/BatchJobs/man/testJob.Rd | 7
58 files changed, 510 insertions(+), 358 deletions(-)
Title: Statistical experiments on batch computing clusters.
Diff between BatchExperiments versions 1.0-528 dated 2012-06-01 and 1.0-607 dated 2012-07-04
More information about BatchExperiments at CRAN
Description: Extends the BatchJobs package to run statistical
experiments on batch computing clusters. For further details
see the project web page.
Author: Bernd Bischl
Maintainer: Michel Lang
DESCRIPTION | 25 +++----
MD5 | 57 ++++++++---------
NAMESPACE | 27 ++++----
NEWS | 5 +
R/ExperimentRegistry.R | 2
R/addExperiments.R | 37 ++++-------
R/database.R | 31 ++++++++-
R/reduceResultsExperiments.R | 1
R/summarizeExperiments.R | 75 ++++++++++++++---------
R/zzz.R | 1
inst/tests/runit_files/BatchJobs.db |binary
inst/tests/runit_files/algorithms/a1.RData |binary
inst/tests/runit_files/algorithms/a2.RData |binary
inst/tests/runit_files/conf.RData |binary
inst/tests/runit_files/jobs/01/1-result.RData |binary
inst/tests/runit_files/jobs/01/1.R | 4 -
inst/tests/runit_files/jobs/02/2-result.RData |binary
inst/tests/runit_files/jobs/02/2.R | 4 -
inst/tests/runit_files/jobs/03/3-result.RData |binary
inst/tests/runit_files/jobs/03/3.R | 4 -
inst/tests/runit_files/problems/p1_dynamic.RData |binary
inst/tests/runit_files/problems/p1_static.RData |binary
inst/tests/runit_files/registry.RData |binary
inst/tests/runit_files/resources |only
inst/tests/test_summarizeExperiments.R | 20 +++++-
man/addAlgorithm.Rd | 2
man/addExperiments.Rd | 4 -
man/addProblem.Rd | 2
man/getResultVars.Rd | 1
man/summarizeExperiments.Rd | 31 +++++++--
30 files changed, 208 insertions(+), 125 deletions(-)
Permanent link
Title: classes and methods for spatio-temporal data
Diff between spacetime versions 0.7-0 dated 2012-05-25 and 0.7-1 dated 2012-07-04
Description: A package with classes and methods for spatio-temporal
data. In particular, space-time regular lattices, sparse
lattices, irregular data, and simple trajectories are
supported. Utility functions are provided for plotting data as
map sequences (lattice or animation) or multiple time series;
for spatial and temporal selection, as well as methods for
retrieving coordinates, for subsetting, print, summary, etc.
Author: Edzer Pebesma [cre, aut], Benedict Graeler [ctb], Tom Gottfried
[ctb]
Maintainer: Edzer Pebesma
DESCRIPTION | 19 +-
MD5 | 55 +++----
NAMESPACE | 13 +
R/Class-STLDF.R |only
R/ST-methods.R | 4
R/STLDF-methods.R |only
R/STTDF-methods.R | 64 +++++---
R/over.R | 2
R/plot.R |only
R/stplot.R | 69 +++++++--
data/air.rda |binary
data/fires.rda |binary
inst/ChangeLog |only
inst/doc/cls.fig | 74 ++++++---
inst/doc/cls.pdf |binary
inst/doc/move.fig | 174 ++++++++++++++--------
inst/doc/move.pdf |binary
inst/doc/spacetime.Rnw | 375 +++++++++++++++++++++++++------------------------
inst/doc/spacetime.bib | 23 ++-
inst/doc/spacetime.pdf |binary
inst/doc/sto.pdf |binary
inst/doc/stpg.pdf |binary
man/STFDF-class.Rd | 1
man/STIDF-class.Rd | 4
man/STLDF-class.Rd |only
man/STSDF-class.Rd | 1
man/STTDF-class.Rd | 4
man/stplot.Rd | 16 +-
tests/traj.R | 4
tests/traj.Rout.save | 21 +-
tests/wind.Rout.save | 8 -
31 files changed, 568 insertions(+), 363 deletions(-)
Title: Convert R Graphics to Flash Animations
Diff between R2SWF versions 0.3-0 dated 2011-12-11 and 0.3-1 dated 2012-07-04
Description: This package uses the Ming library
(http://www.libming.org/) to create Flash animations.
Author: Yixuan Qiu and Yihui Xie
Maintainer: Yixuan Qiu
DESCRIPTION | 10
MD5 | 92 +--
NEWS | 13
R/R2SWF.R | 80 +-
R/svg2swf.R | 366 ++++++-------
man/dev2swf.Rd | 15
man/svg2swf.Rd | 37 -
src/image2swf.c | 127 ++--
src/libpng/png.c | 598 +++++++++++++++++++--
src/libpng/png.h | 148 ++++-
src/libpng/pngconf.h | 85 +--
src/libpng/pngerror.c | 85 +--
src/libpng/pngget.c | 120 +++-
src/libpng/pnglibconf.h | 11
src/libpng/pngmem.c | 16
src/libpng/pngpread.c | 778 ++++------------------------
src/libpng/pngpriv.h | 477 ++++++++++++++---
src/libpng/pngread.c | 415 ++++-----------
src/libpng/pngrtran.c | 833 ++++++++++++++++--------------
src/libpng/pngrutil.c | 1311 +++++++++++++++++++++++++++++++++---------------
src/libpng/pngset.c | 119 +++-
src/libpng/pngstruct.h | 68 +-
src/libpng/pngtrans.c | 107 +++
src/libpng/pngwrite.c | 80 +-
src/libpng/pngwtran.c | 26
src/libpng/pngwutil.c | 248 ++++-----
src/rsvg-bpath-util.c | 23
src/rsvg-path.c | 23
src/svg2swf.c | 326 +++++++----
src/zlib/adler32.c | 68 +-
src/zlib/crc32.c | 83 +--
src/zlib/crc32.h | 2
src/zlib/deflate.c | 265 +++++++--
src/zlib/deflate.h | 10
src/zlib/gzguts.h | 87 ++-
src/zlib/gzlib.c | 165 ++++--
src/zlib/gzread.c | 420 ++++++---------
src/zlib/gzwrite.c | 146 +++--
src/zlib/infback.c | 14
src/zlib/inffixed.h | 6
src/zlib/inflate.c | 90 +--
src/zlib/inftrees.c | 46 -
src/zlib/trees.c | 40 -
src/zlib/zconf.h | 196 +++++--
src/zlib/zlib.h | 309 ++++++++---
src/zlib/zutil.c | 24
src/zlib/zutil.h | 98 +--
47 files changed, 5155 insertions(+), 3551 deletions(-)
Title: Analyzing survival data
Diff between p3state.msm versions 1.2 dated 2010-11-28 and 1.3 dated 2012-07-04
Description: Analyzing survival data from illness-death model
Author: Luis Meira-Machado and Javier Roca-Pardinas
Maintainer: Luis Felipe Meira-Machado
p3state.msm-1.2/p3state.msm/R/ZZZ.r |only
p3state.msm-1.3/p3state.msm/DESCRIPTION | 8
p3state.msm-1.3/p3state.msm/MD5 |only
p3state.msm-1.3/p3state.msm/R/p3state.R | 317 ++++++++++-----------
p3state.msm-1.3/p3state.msm/R/pLIDA.R | 111 +++----
p3state.msm-1.3/p3state.msm/man/plot.p3state.Rd | 94 +++---
p3state.msm-1.3/p3state.msm/man/summary.p3state.Rd | 91 ++----
7 files changed, 316 insertions(+), 305 deletions(-)
Title: Korean NLP Package
Diff between KoNLP versions 0.7 dated 2012-03-16 and 0.73 dated 2012-07-04
Description: Korean language processing package. Morphlogical analyzer,
POS tagger, Keystroke converter, Hangul automata...
Author: Heewon Jeon
Maintainer: Heewon Jeon
DESCRIPTION | 9 +++++----
MD5 | 22 +++++++++++-----------
NAMESPACE | 8 ++++----
NEWS | 9 +++++++++
R/KoAnalyzerRun.R | 20 ++++++++++++++++++++
R/manageDic.R | 18 +++++++++++++-----
R/onLoad.R | 9 ++++++++-
R/sysdata.rda |binary
man/backupUsrDic.Rd | 4 +++-
man/mergeUserDic.Rd | 4 +++-
man/reloadAllDic.Rd | 4 +++-
man/restoreUsrDic.Rd | 4 +++-
12 files changed, 82 insertions(+), 29 deletions(-)
Title: Time series management, analysis and interpolation for
hydrological modelling
Diff between hydroTSM versions 0.3-4 dated 2012-05-03 and 0.3-5 dated 2012-07-04
Description: S3 functions for management, analysis, interpolation and
plotting of time series used in hydrology and related
environmental sciences. In particular, this package is highly
oriented to hydrological modelling tasks. The focus of this
package has been put in providing a collection of tools useful
for the daily work of hydrologists (although an effort was made
to optimise each function as much as possible, functionality
has had priority over speed). Bugs / comments / questions /
collaboration of any kind are very welcomed, and in particular,
datasets that can be included in this package for academic
purposes.
Author: Mauricio Zambrano-Bigiarini [aut, cre]
Maintainer: Mauricio Zambrano-Bigiarini
DESCRIPTION | 8 +--
MD5 | 38 +++++++--------
NEWS | 50 +++++++++++---------
R/daily2annual.R | 45 ++++++++++--------
R/daily2monthly.R | 51 ++++++++++----------
R/dwi.R | 74 ++++++++++++++++++-----------
R/hydrokrige.R | 69 ++++++++++++++++-----------
R/hydroplot.R | 13 ++++-
R/hypsometric.R | 60 +++++++++++++++++-------
R/izoo2rzoo.R | 102 +++++++++++++++++++++++------------------
R/monthlyfunction.R | 24 ++++++---
R/sfreq.R | 20 +++++---
WhatsNew.txt | 21 ++++++++
inst/doc/hydroTSM_Vignette.pdf |binary
man/daily2annual.Rd | 11 ++++
man/daily2monthly.Rd | 9 +++
man/hydroTSM-package.Rd | 10 +---
man/hypsometric.Rd | 19 ++++++-
man/izoo2rzoo.Rd | 6 ++
man/sfreq.Rd | 6 ++
20 files changed, 400 insertions(+), 236 deletions(-)
Title: Multilayer optics
Diff between planar versions 1.2.1 dated 2012-05-15 and 1.2.2 dated 2012-07-04
Description: Solves the electromagnetic problem of reflection and
transmission at a multilayer planar interface. Also computes
the decay rates for a dipolar emitter near a multilayer
structure.
Author: baptiste Auguie
Maintainer: baptiste Auguie
planar-1.2.1/planar/demo/EM_enhancements.r |only
planar-1.2.1/planar/demo/field_enhancement.r |only
planar-1.2.1/planar/demo/fluorescence_pattern.r |only
planar-1.2.1/planar/demo/integrated_fluorescence.r |only
planar-1.2.1/planar/demo/kretschmann_fluo_distance.r |only
planar-1.2.2/planar/DESCRIPTION | 10 -
planar-1.2.2/planar/MD5 | 36 ++--
planar-1.2.2/planar/NAMESPACE | 1
planar-1.2.2/planar/NEWS | 6
planar-1.2.2/planar/R/multilayer.r | 31 ++-
planar-1.2.2/planar/R/planar-package.r | 9 -
planar-1.2.2/planar/demo/00Index | 13 -
planar-1.2.2/planar/demo/LFIEF_angular_pattern_dummy.r |only
planar-1.2.2/planar/demo/LFIEF_angular_pattern_kretschmann.r |only
planar-1.2.2/planar/demo/LFIEF_distance.r | 89 +++++++----
planar-1.2.2/planar/demo/decay_fluo_distance.r |only
planar-1.2.2/planar/demo/decay_rates.r |only
planar-1.2.2/planar/demo/field_profile_multilayer.r |only
planar-1.2.2/planar/demo/integrated_decay_rates.r |only
planar-1.2.2/planar/inst/doc/planar-vignette.Rnw | 65 ++++----
planar-1.2.2/planar/inst/doc/planar-vignette.pdf |binary
planar-1.2.2/planar/man/field.profile.Rd | 12 -
planar-1.2.2/planar/man/invert_incidence.Rd |only
planar-1.2.2/planar/man/multilayer.Rd | 14 -
planar-1.2.2/planar/man/planar-package.Rd | 16 -
25 files changed, 178 insertions(+), 124 deletions(-)
Title: Multivariate Imputation by Chained Equations
Diff between mice versions 2.12 dated 2012-03-25 and 2.13 dated 2012-07-04
Description: Multiple imputation using Fully Conditional Specification
(FCS) implemented by the MICE algorithm. Each variable has its
own imputation model. Built-in imputation models are provided
for continuous data (predictive mean matching, normal), binary
data (logistic regression), unordered categorical data
(polytomous logistic regression) and ordered categorical data
(proportional odds). MICE can also impute continuous two-level
data (normal model, pan, second-level variables). Passive
imputation can be used to maintain consistency between
variables. Various diagnostic plots are available to inspect
the quality of the imputations.
Author: Stef van Buuren and Karin Groothuis-Oudshoorn, with
contributions from Alexander Robitzsch and Gerko Vink
Maintainer: Stef van Buuren
DESCRIPTION | 32 +-
MD5 | 66 ++--
NAMESPACE | 214 +++++++--------
R/auxiliary.r | 552 ----------------------------------------
R/mice.R | 87 ++++--
R/mice.impute.quadratic.R |only
R/mice_multilevel_adds__0-2.1.R |only
data/boys.rda |binary
data/fdd.pred.rda |binary
data/fdd.rda |binary
data/fdgs.rda |binary
data/leiden85.rda |binary
data/mammalsleep.rda |binary
data/nhanes.rda |binary
data/nhanes2.rda |binary
data/pattern1.rda |binary
data/pattern2.rda |binary
data/pattern3.rda |binary
data/pattern4.rda |binary
data/popmis.rda |binary
data/pops.pred.rda |binary
data/pops.rda |binary
data/potthoffroy.rda |binary
data/selfreport.rda |binary
data/tbc.rda |binary
data/tbc.target.rda |binary
data/walking.rda |binary
data/windspeed.rda |binary
inst/NEWS | 375 ++++++++++++++-------------
man/mice-auxiliary.Rd | 19 -
man/mice.Rd | 28 +-
man/mice.impute.2l.norm.rd | 14 -
man/mice.impute.2l.pan.Rd |only
man/mice.impute.2lonly.norm.Rd |only
man/mice.impute.2lonly.pmm.Rd |only
man/mice.impute.pmm.Rd | 8
man/mice.impute.quadratic.Rd |only
37 files changed, 475 insertions(+), 920 deletions(-)
Title: Faisal Conjoint Model: A New Approach to Conjoint Analysis
Diff between faisalconjoint versions 1.0 dated 2012-02-23 and 1.10 dated 2012-07-04
More information about faisalconjoint at CRAN
Description: It is used for systematic analysis of decisions based on
attributes and its levels.
Author: Faisal Afzal Siddiqui, Ghulam Hussain, and Mudassir Uddin
Maintainer: Faisal Afzal Siddiqui
DESCRIPTION | 11 +++----
MD5 | 24 ++++++++---------
R/faisalconjoint.R | 58 +++++++++++++++++++++++++++---------------
data/candies_data.rda |binary
data/candies_levels.rda |binary
data/carpet_data.rda |binary
data/carpet_levels.rda |binary
data/cleanser_data.rda |binary
data/cleanser_levels.rda |binary
data/traditional_data.rda |binary
data/traditional_levels.rda |binary
faisalconjoint-manual.pdf |binary
man/faisalconjoint-package.Rd | 21 ++++++---------
13 files changed, 64 insertions(+), 50 deletions(-)
Permanent link
Title: Miscellaneous helper functions for B. Bischl.
Diff between BBmisc versions 1.1-125 dated 2012-05-10 and 1.1-132 dated 2012-07-04
Description: Miscellaneous helper functions for and from B. Bischl and
some other guys at TU Dortmund, mainly for package development.
Author: Bernd Bischl
Maintainer: Bernd Bischl
DESCRIPTION | 6 +++---
MD5 | 12 ++++++------
NAMESPACE | 4 ++--
NEWS | 3 +++
R/parallel.R | 1 +
R/system3.R | 12 ++++++++----
inst/tests/test_system3.R | 2 ++
7 files changed, 25 insertions(+), 15 deletions(-)