Title: Forecast verification utilities.
Diff between verification versions 1.33 dated 2012-06-22 and 1.34 dated 2012-07-11
Description: This package contains utilities for verification of
discrete,continuous, probabilistic forecasts and forecast
expressed as parametric distributions.
Author: NCAR - Research Application Program
Maintainer: Eric Gilleland
DESCRIPTION | 6 +++---
MD5 | 10 +++++-----
R/summary.bin.bin.R | 10 +++++++++-
R/table.stats.R | 28 +++++++++++++++++++++++-----
inst/doc/verification.pdf |binary
man/table.stats.Rd | 15 +++++++++++++++
6 files changed, 55 insertions(+), 14 deletions(-)
Title: Probabilistic latent variable models for metabolomic data.
Diff between MetabolAnalyze versions 1.2 dated 2010-09-06 and 1.3 dated 2012-07-11
More information about MetabolAnalyze at CRAN
Description: Fits probabilistic principal components analysis,
probabilistic principal components and covariates analysis and
mixtures of probabilistic principal components models to
metabolomic spectral data.
Author: Nyamundanda Gift, Isobel Claire Gormley and Lorraine Brennan.
Maintainer: Claire Gormley
DESCRIPTION | 6 +++---
MD5 |only
NAMESPACE |only
R/mppca.metabol.R | 2 +-
man/mppca.metabol.Rd | 2 ++
man/ppca.metabol.Rd | 2 ++
man/ppcca.metabol.Rd | 2 ++
7 files changed, 10 insertions(+), 4 deletions(-)
Permanent link
Title: Joint meta-analysis of diagnostic test sensitivity and
specificity with or without a gold standard reference test
Diff between HSROC versions 2.1.1 dated 2012-07-10 and 2.1.3 dated 2012-07-11
Description: This package implements a model for joint meta-analysis of
sensitivity and specificity of the diagnostic test under
evaluation, while taking into account the possibly imperfect
sensitivity and specificity of the reference test. This
hierarchical model accounts for both within and between study
variability. Estimation is carried out using a Bayesian
approach, implemented via a Gibbs sampler. The model can be
applied in situations where more than one reference test is
used in the selected studies.
Author: Ian Schiller and Nandini Dendukuri
Maintainer: Ian Schiller
HSROC-2.1.1/HSROC/src/Makevars |only
HSROC-2.1.1/HSROC/src/Makevars.win |only
HSROC-2.1.3/HSROC/.Rinstignore |only
HSROC-2.1.3/HSROC/DESCRIPTION | 12 -
HSROC-2.1.3/HSROC/MD5 | 26 +++-
HSROC-2.1.3/HSROC/NEWS | 17 ++
HSROC-2.1.3/HSROC/R/HSROC-internal.R | 126 ++++++++++++++++++++
HSROC-2.1.3/HSROC/inst/doc/Density_2.PNG |only
HSROC-2.1.3/HSROC/inst/doc/Density_refstd.PNG |only
HSROC-2.1.3/HSROC/inst/doc/Ref.bib |only
HSROC-2.1.3/HSROC/inst/doc/SROC_1.png |only
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HSROC-2.1.3/HSROC/inst/doc/Trace_plot_refstd.PNG |only
HSROC-2.1.3/HSROC/inst/doc/Tutorial.Rtex |only
HSROC-2.1.3/HSROC/inst/doc/Tutorial.pdf |binary
HSROC-2.1.3/HSROC/src/HSROC.cpp | 37 +++--
23 files changed, 186 insertions(+), 32 deletions(-)
Title: Features and Strings for Nonparametric Regression
Diff between ftnonpar versions 0.1-84 dated 2010-08-13 and 0.1-86 dated 2012-07-11
Description: The package contains R-functions to perform the methods in
nonparametric regression and density estimation, described in
Davies, P. L. and Kovac, A. (2001) Local Extremes, Runs,
Strings and Multiresolution (with discussion) Annals of
Statistics. 29. p1-65 Davies, P. L. and Kovac, A. (2004)
Densities, Spectral Densities and Modality Annals of
Statistics. Annals of Statistics. 32. p1093-1136 Kovac, A.
(2006) Smooth functions and local extreme values. Computational
Statistics and Data Analysis (to appear) D\"umbgen, L. and
Kovac, A. (2006) Extensions of smoothing via taut strings
Davies, P. L. (1995) Data features. Statistica Neerlandica
49,185-245.
Author: Laurie Davies
Maintainer: Arne Kovac
ftnonpar-0.1-84/ftnonpar/INDEX |only
ftnonpar-0.1-84/ftnonpar/data/balloon.R |only
ftnonpar-0.1-84/ftnonpar/data/djdata.R |only
ftnonpar-0.1-86/ftnonpar/COPYRIGHT | 2 +-
ftnonpar-0.1-86/ftnonpar/DESCRIPTION | 8 ++++----
ftnonpar-0.1-86/ftnonpar/MD5 |only
ftnonpar-0.1-86/ftnonpar/NAMESPACE |only
ftnonpar-0.1-86/ftnonpar/R/mintvmon.R | 2 +-
ftnonpar-0.1-86/ftnonpar/R/pmden.R | 4 ++--
ftnonpar-0.1-86/ftnonpar/data/balloon.rda |only
ftnonpar-0.1-86/ftnonpar/data/djdata.rda |only
ftnonpar-0.1-86/ftnonpar/man/frun.Rd | 2 --
ftnonpar-0.1-86/ftnonpar/man/l1pmreg.Rd | 2 --
ftnonpar-0.1-86/ftnonpar/man/pmspec.Rd | 3 ---
ftnonpar-0.1-86/ftnonpar/man/smdenreg.Rd | 4 ++--
ftnonpar-0.1-86/ftnonpar/src/NPSPCDN.f | 2 +-
ftnonpar-0.1-86/ftnonpar/src/kkuip.c | 2 +-
ftnonpar-0.1-86/ftnonpar/src/mintvmon.c | 4 ----
ftnonpar-0.1-86/ftnonpar/src/smqreg.c | 22 ++++++++++++++++------
19 files changed, 28 insertions(+), 29 deletions(-)
Title: Estimation of transitions probabilities in multistate models
Diff between TPmsm versions 1.0 dated 2012-07-05 and 1.0.1 dated 2012-07-11
Description: Estimation of transition probabilities for the
illness-death model and or the three-state progressive model
Author: Artur Agostinho Araujo, Javier Roca-Pardinas
Maintainer: Artur Agostinho Araujo
DESCRIPTION | 8 ++++----
MD5 | 28 ++++++++++++++--------------
inst/NEWS.Rd | 6 ++++++
src/transAJ.c | 4 ++++
src/transIPCW1.c | 4 ++++
src/transIPCW2.c | 4 ++++
src/transKMPW1.c | 4 ++++
src/transKMPW2.c | 4 ++++
src/transKMW1.c | 4 ++++
src/transKMW2.c | 4 ++++
src/transLIN1.c | 4 ++++
src/transLIN2.c | 4 ++++
src/transLS.c | 8 ++++++++
src/transPAJ.c | 4 ++++
src/uniqueTP.c | 4 ++--
15 files changed, 74 insertions(+), 20 deletions(-)
Title: Methods for SDC (statistical disclosure control) in tabular data
Diff between sdcTable versions 0.9.9 dated 2011-11-21 and 0.10.1 dated 2012-07-11
Description: Implementation of methods for SDC (statistical disclosure
control) in tabular data
Author: Bernhard Meindl
Maintainer: Bernhard Meindl
sdcTable-0.10.1/sdcTable/.project |only
sdcTable-0.10.1/sdcTable/DESCRIPTION | 14 -
sdcTable-0.10.1/sdcTable/MD5 | 33 +-
sdcTable-0.10.1/sdcTable/NAMESPACE | 100 ++++----
sdcTable-0.10.1/sdcTable/R/classes.r | 4
sdcTable-0.10.1/sdcTable/R/export_functions.r | 11
sdcTable-0.10.1/sdcTable/R/helper_functions.r | 161 ++++++++++++-
sdcTable-0.10.1/sdcTable/R/methods_class_dimVar.r | 7
sdcTable-0.10.1/sdcTable/R/methods_class_problemInstance.r | 9
sdcTable-0.10.1/sdcTable/R/methods_class_sdcProblem.r | 27 +-
sdcTable-0.10.1/sdcTable/R/methods_multiple_classes.r | 5
sdcTable-0.10.1/sdcTable/R/zzz.r | 3
sdcTable-0.10.1/sdcTable/inst/doc/sdcTable.pdf |binary
sdcTable-0.10.1/sdcTable/inst/doc/workDat.RData |binary
sdcTable-0.10.1/sdcTable/man/protectTable.Rd | 4
sdcTable-0.10.1/sdcTable/src/Makevars | 2
sdcTable-0.10.1/sdcTable/src/Makevars.win | 2
sdcTable-0.9.9/sdcTable/inst/doc/Sweave.sty |only
sdcTable-0.9.9/sdcTable/inst/doc/sdcTable.tex |only
sdcTable-0.9.9/sdcTable/inst/doc/sdcTable.toc |only
20 files changed, 280 insertions(+), 102 deletions(-)
Title: Latin Hypercube Samples
Diff between lhs versions 0.7 dated 2012-03-27 and 0.8 dated 2012-07-11
Description: This package provides a number of methods for creating and
augmenting Latin Hypercube Samples
Author: Rob Carnell [aut, cre]
Maintainer: Rob Carnell
lhs-0.7/lhs/src/improvedLHS_R.c |only
lhs-0.7/lhs/src/maximinLHS_R.c |only
lhs-0.7/lhs/src/optSeededLHS_R.c |only
lhs-0.7/lhs/src/optimumLHS_R.c |only
lhs-0.8/lhs/ChangeLog | 6 -
lhs-0.8/lhs/DESCRIPTION | 12 +-
lhs-0.8/lhs/MD5 | 42 ++++---
lhs-0.8/lhs/R/geneticLHS.R | 19 +--
lhs-0.8/lhs/R/improvedLHS.r | 13 +-
lhs-0.8/lhs/R/maximinLHS.R | 13 +-
lhs-0.8/lhs/R/optAugmentLHS.R | 8 -
lhs-0.8/lhs/R/optSeededLHS.R | 12 --
lhs-0.8/lhs/R/optimumLHS.R | 14 +-
lhs-0.8/lhs/R/runifint.r |only
lhs-0.8/lhs/inst/doc/augmentLHS_Example.pdf |binary
lhs-0.8/lhs/man/geneticLHS.Rd | 3
lhs-0.8/lhs/man/lhs-internal.Rd |only
lhs-0.8/lhs/man/lhs-package.rd | 7 +
lhs-0.8/lhs/man/optSeededLHS.Rd | 3
lhs-0.8/lhs/man/optimumLHS.Rd | 3
lhs-0.8/lhs/src/defines.h | 57 ++++++++--
lhs-0.8/lhs/src/improvedLHS_R.cpp |only
lhs-0.8/lhs/src/maximinLHS_R.cpp |only
lhs-0.8/lhs/src/optSeededLHS_R.cpp |only
lhs-0.8/lhs/src/optimumLHS_R.cpp |only
lhs-0.8/lhs/src/simpleMatrix.h |only
lhs-0.8/lhs/src/utilityLHS_R.cpp | 150 +++++++++++-----------------
lhs-0.8/lhs/src/utilityLHS_R.h |only
28 files changed, 187 insertions(+), 175 deletions(-)
More information about hypothesestest at CRAN
Permanent link
Title: descriptives by groups
Diff between compareGroups versions 1.1 dated 2012-05-13 and 1.2 dated 2012-07-11
Description: This package is meant to facilitate the construction of
bivariate table (descriptives of several variables between
groups) and generate reports in LaTeX, HTML or (CSV) plain
text. Also, it includes a graphical interface (GUI) to build
these tables more easily.
Author: Isaac Subirana, Héctor Sanz, Joan Vila
Maintainer: Isaac Subirana
DESCRIPTION | 8 +-
MD5 | 11 ++-
R/export2html.R | 126 +++++++++++++-----------------------------
R/simplify.formula.R |only
R/update.formula2.R | 42 ++++++++++----
inst/doc/changelog.txt | 6 ++
man/compareGroups-internal.Rd | 4 +
7 files changed, 90 insertions(+), 107 deletions(-)
Title: Selecting variable subsets
Diff between subselect versions 0.11-3 dated 2011-12-22 and 0.12-0 dated 2012-07-11
Description: A collection of functions which (i) assess the quality of
variable subsets as surrogates for a full data set, in either
an exploratory data analysis or in the context of a
multivariate linear model, and (ii) search for subsets which
are optimal under various criteria.
Author: Jorge Orestes Cerdeira
Maintainer: Jorge Cadima
DESCRIPTION | 21 -
MD5 | 105 +++---
NAMESPACE | 2
R/anneal.R | 67 +--
R/ccr12.R | 2
R/createHmat.R | 31 -
R/eleaps.R | 71 +---
R/genetic.R | 79 ++--
R/improve.R | 60 +--
R/prepRetOtp.R |only
R/tau2.R | 4
R/validation.R | 13
R/validmat.R | 17
R/xi2.R | 2
R/zeta2.R | 2
inst/CHANGELOG | 69 +++
inst/doc/subselect.Rnw | 19 -
inst/doc/subselect.pdf |binary
man/anneal.Rd | 23 -
man/eleaps.Rd | 26 -
man/genetic.Rd | 96 +++--
man/improve.Rd | 27 -
man/ldaHmat.Rd | 5
man/subselect-internal.Rd | 7
src/CCRcrt.cpp | 20 -
src/CCRcrt.h | 24 -
src/ErrMReals.h | 73 +++-
src/GCDcrt.cpp | 24 +
src/GCDcrt.h | 6
src/Gstatma.cpp | 2
src/ItIndices.h | 4
src/MStcrt.cpp | 20 -
src/Qforms.cpp | 4
src/Qforms.h | 19 -
src/RMcrt.cpp | 7
src/RVcrt.cpp | 19 -
src/Rnk3CCRcrt.h | 6
src/SRI_sscma.cpp | 28 +
src/SRI_sscma.h | 2
src/SR_datatrnsf.cpp | 127 +++----
src/SR_intf.cpp | 9
src/SpecialArrays.h | 9
src/Sscma.cpp | 242 ++++++-------
src/Sscma.h | 19 -
src/Subsets.cpp | 24 -
src/Subsets.h | 3
src/VSQforms.cpp | 3
src/Varsmbo.cpp | 204 ++++++-----
src/Vsmabo.h | 111 +++---
src/Wrkf1.cpp | 118 +++++-
src/anneal.f | 162 +++++----
src/auxiliar.f | 800 +++++++++++++++++++++++++++++++---------------
src/genetic.f | 169 ++++++---
src/improve.f | 99 +++--
54 files changed, 1889 insertions(+), 1216 deletions(-)
Title: Morse-Smale approximation, regression and visualization
Diff between msr versions 0.4 dated 2012-04-05 and 0.4.1 dated 2012-07-11
Description: Package for discrete Morse-Smale complex approximation
based on kNN graph. The Morse-Smale complex provides a
decomposition of the domain. This package provides methods to
compute a hierarchical sequence of Morse-Smale complicies and
tools that exploit this domain decomposition for regression and
visualization of scalar functions.
Author: Samuel Gerber
Maintainer: Samuel Gerber
msr-0.4.1/msr/ChangeLog | 2
msr-0.4.1/msr/DESCRIPTION | 6 +-
msr-0.4.1/msr/MD5 | 40 +++++++++---------
msr-0.4.1/msr/data/diagonal.rda |binary
msr-0.4.1/msr/data/fourpeaks.rda |binary
msr-0.4.1/msr/inst |only
msr-0.4.1/msr/man/msc.level.ind.Rd | 13 ++++++
msr-0.4.1/msr/man/msc.lm.Rd | 12 +++++
msr-0.4.1/msr/man/msc.nn.Rd | 10 +++-
msr-0.4.1/msr/man/msc.slm.Rd | 13 +++++-
msr-0.4.1/msr/man/msc.sublevels.Rd | 13 ++++++
msr-0.4.1/msr/man/msr-package.Rd | 5 +-
msr-0.4.1/msr/man/plot.msc.Rd | 11 ++++-
msr-0.4.1/msr/man/predict.msc.Rd | 18 ++++++++
msr-0.4.1/msr/src/DenseMatrix.h | 4 +
msr-0.4.1/msr/src/DenseVector.h | 3 -
msr-0.4.1/msr/src/GaussianKernel.h | 2
msr-0.4.1/msr/src/Kernel.h | 1
msr-0.4.1/msr/src/KernelDensity.h | 12 +++++
msr-0.4.1/msr/src/Linalg.h | 80 +++++++++++++++++++++++++++++++------
msr-0.4.1/msr/src/NNMSComplex.h | 21 +++++----
msr-0.4/msr/src/NNMSComplex2.h |only
22 files changed, 211 insertions(+), 55 deletions(-)
Title: Variable selection for generalized linear mixed models by
L1-penalized estimation
Diff between glmmLasso versions 1.0.3 dated 2012-07-09 and 1.0.4 dated 2012-07-11
Description: Variable selection for generalized linear mixed models by
L1-penalized estimation
Author: Andreas Groll
Maintainer: Andreas Groll
DESCRIPTION | 10 +++++-----
MD5 | 4 ++--
man/glmmLasso.rd | 4 ++--
3 files changed, 9 insertions(+), 9 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-09-03 0.3
2007-06-28 0.2.2
Title: R Commander Plug-in for MPA Statistics
Diff between RcmdrPlugin.MPAStats versions 1.0 dated 2012-06-15 and 1.0.1 dated 2012-07-11
More information about RcmdrPlugin.MPAStats at CRAN
Description: This package provides an R Commander plugin that offers a
unified menu of new and pre-existing statistical functions
related to public management and policy analysis statistics.
Functions and menus have been renamed according to the usage in
PMGT 630 in the Master of Public Administration program at
Brigham Young University.
Author: Andrew Heiss
Maintainer: Andrew Heiss
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/RcmdrPlugin.MPAStats.R | 10 +++++++++-
man/RcmdrPlugin.MPAStats-package.Rd | 4 ++--
4 files changed, 18 insertions(+), 10 deletions(-)
Permanent link
Title: Fractional Factorial designs with 2-level factors
Diff between FrF2 versions 1.5 dated 2012-06-29 and 1.6 dated 2012-07-11
Description: This package creates regular and non-regular Fractional
Factorial designs. Furthermore, analysis tools for Fractional
Factorial designs with 2-level factors are offered (main
effects and interaction plots for all factors simultaneously,
cube plot for looking at the simultaneous effects of three
factors, full or half normal plot, alias structure in a more
readable format than with the built-in function alias). The
package is still under development. While much of the intended
functionality is already available, some changes and
improvements are still to be expected. Suggestions are welcome.
Author: Ulrike Groemping
Maintainer: Ulrike Groemping
DESCRIPTION | 8 -
FrF2-Ex.R | 8 +
MD5 | 22 ++--
R/CIG.R | 15 ++-
R/estimable2fis.R | 8 +
R/sysdata.rda |binary
inst/NEWS | 13 ++
man/CIG.Rd | 43 +++++++--
tests/FrF2test.R | 39 +++++---
tests/FrF2test.Rout.save | 146 ++++++++------------------------
tests/generators.summary.test.R | 8 -
tests/generators.summary.test.Rout.save | 22 +---
12 files changed, 158 insertions(+), 174 deletions(-)