Sat, 21 Jul 2012

Package ROracle updated to version 1.1-3 with previous version 1.1-2 dated 2012-03-31

Title: OCI based Oracle database interface for R
Description: Oracle database interface (DBI) driver for R. This is a DBI-compliant Oracle driver based on the OCI.
Author: Denis Mukhin, David A. James and Jake Luciani
Maintainer: Denis Mukhin

Diff between ROracle versions 1.1-2 dated 2012-03-31 and 1.1-3 dated 2012-07-21

 ROracle-1.1-2/ROracle/src/roci.c                       |only
 ROracle-1.1-3/ROracle/DESCRIPTION                      |    8 
 ROracle-1.1-3/ROracle/INSTALL                          |   52 ++
 ROracle-1.1-3/ROracle/MD5                              |  205 ++++++++-
 ROracle-1.1-3/ROracle/NEWS                             |   28 +
 ROracle-1.1-3/ROracle/R/dbi.R                          |   10 
 ROracle-1.1-3/ROracle/R/oci.R                          |  370 +++++++++++++----
 ROracle-1.1-3/ROracle/configure.win                    |   19 
 ROracle-1.1-3/ROracle/inst/doc                         |only
 ROracle-1.1-3/ROracle/man/OraConnection-class.Rd       |    4 
 ROracle-1.1-3/ROracle/man/Oracle.Rd                    |  244 ++++++-----
 ROracle-1.1-3/ROracle/man/dbCommit-methods.Rd          |   60 +-
 ROracle-1.1-3/ROracle/man/dbConnect-methods.Rd         |  212 ++++++---
 ROracle-1.1-3/ROracle/man/dbDriver-methods.Rd          |   84 +++
 ROracle-1.1-3/ROracle/man/dbGetInfo-methods.Rd         |   52 +-
 ROracle-1.1-3/ROracle/man/dbListConnections-methods.Rd |   50 +-
 ROracle-1.1-3/ROracle/man/dbReadTable-methods.Rd       |  166 +++----
 ROracle-1.1-3/ROracle/man/dbSendQuery-methods.Rd       |  116 ++++-
 ROracle-1.1-3/ROracle/man/fetch-methods.Rd             |   44 +-
 ROracle-1.1-3/ROracle/man/summary-methods.Rd           |   43 +
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 27 files changed, 1291 insertions(+), 478 deletions(-)

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Package sideChannelAttack updated to version 1.0-3 with previous version 1.0-2 dated 2012-04-08

Title: Side Channel Attack
Description: This package has many purposes: first, it gives to the community an R implementation of each known side channel attack and countermeasures as well as data to test it, second it allows to implement a side channel attack quickly and easily.
Author: Liran Lerman , Gianluca Bontempi , Olivier Markowitch
Maintainer: Liran Lerman

Diff between sideChannelAttack versions 1.0-2 dated 2012-04-08 and 1.0-3 dated 2012-07-21

 sideChannelAttack-1.0-2/sideChannelAttack/data/.Rapp.history |only
 sideChannelAttack-1.0-3/sideChannelAttack/DESCRIPTION        |    8 ++++----
 sideChannelAttack-1.0-3/sideChannelAttack/MD5                |    4 ++--
 sideChannelAttack-1.0-3/sideChannelAttack/R/filter.default.R |    6 +++---
 4 files changed, 9 insertions(+), 9 deletions(-)

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Package grpreg updated to version 2.0-0 with previous version 1.2-2 dated 2012-07-12

Title: Regularization paths for regression models with grouped covariates
Description: Efficient algorithms for fitting the regularization path of linear or logistic regression models with grouped penalties, such as group lasso, group MCP, and group SCAD. The algorithms are based on the idea of either locally approximated coordinate descent or group descent, depending on the penalty.
Author: Patrick Breheny
Maintainer: Patrick Breheny

Diff between grpreg versions 1.2-2 dated 2012-07-12 and 2.0-0 dated 2012-07-21

 grpreg-1.2-2/grpreg/R/calcL.R              |only
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 grpreg-2.0-0/grpreg/DESCRIPTION            |   16 
 grpreg-2.0-0/grpreg/MD5                    |   48 -
 grpreg-2.0-0/grpreg/NAMESPACE              |   13 
 grpreg-2.0-0/grpreg/NEWS                   |   14 
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 grpreg-2.0-0/grpreg/R/grpreg.R             |  120 ++-
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 grpreg-2.0-0/grpreg/R/orthogonalize.R      |only
 grpreg-2.0-0/grpreg/R/plot.R               |   91 +-
 grpreg-2.0-0/grpreg/R/plot.cv.R            |only
 grpreg-2.0-0/grpreg/R/predict.R            |only
 grpreg-2.0-0/grpreg/R/select.R             |   53 +
 grpreg-2.0-0/grpreg/R/setupLambda.R        |   82 +-
 grpreg-2.0-0/grpreg/R/standardize.R        |only
 grpreg-2.0-0/grpreg/inst/tests             |only
 grpreg-2.0-0/grpreg/man/birthwt.grpreg.Rd  |   62 +
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 grpreg-2.0-0/grpreg/man/grpreg-internal.Rd |   20 
 grpreg-2.0-0/grpreg/man/grpreg-package.Rd  |   94 +-
 grpreg-2.0-0/grpreg/man/grpreg.Rd          |  226 +++---
 grpreg-2.0-0/grpreg/man/logLik.grpreg.Rd   |   14 
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 grpreg-2.0-0/grpreg/man/plot.grpreg.Rd     |   20 
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 grpreg-2.0-0/grpreg/man/select.grpreg.Rd   |   24 
 grpreg-2.0-0/grpreg/src/grpreg.c           |  946 +++++++++++++----------------
 grpreg-2.0-0/grpreg/tests/test-all.R       |only
 34 files changed, 990 insertions(+), 853 deletions(-)

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Package gMCP updated to version 0.7-11 with previous version 0.7-10 dated 2012-06-15

Title: Graph Based Multiple Comparison Procedures
Description: This package provides functions and a graphical user interface for graphical described multiple test procedures.
Author: Kornelius Rohmeyer, Florian Klinglmueller (parametric tests, adaptive designs), Bjoern Bornkamp (power simulations)
Maintainer: Kornelius Rohmeyer

Diff between gMCP versions 0.7-10 dated 2012-06-15 and 0.7-11 dated 2012-07-21

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 gMCP-0.7-10/gMCP/inst/unitTests/tests.R                                                     |only
 gMCP-0.7-10/gMCP/inst/unitTests/unirootbug.Rd                                               |only
 gMCP-0.7-11/gMCP/DESCRIPTION                                                                |    6 
 gMCP-0.7-11/gMCP/INSTALL                                                                    |    6 
 gMCP-0.7-11/gMCP/MD5                                                                        |  169 +++--
 gMCP-0.7-11/gMCP/NAMESPACE                                                                  |    5 
 gMCP-0.7-11/gMCP/NEWS                                                                       |  181 ++++--
 gMCP-0.7-11/gMCP/R/analysis.R                                                               |   43 -
 gMCP-0.7-11/gMCP/R/calcPower.R                                                              |   68 +-
 gMCP-0.7-11/gMCP/R/doRUnitTests.R                                                           |   41 +
 gMCP-0.7-11/gMCP/R/exampleGraphs.R                                                          |   53 +
 gMCP-0.7-11/gMCP/R/gACT-internal.R                                                          |   36 -
 gMCP-0.7-11/gMCP/R/gMCP.R                                                                   |  119 +++-
 gMCP-0.7-11/gMCP/R/generateBounds.R                                                         |    4 
 gMCP-0.7-11/gMCP/R/generatePvals.R                                                          |    4 
 gMCP-0.7-11/gMCP/R/generateTest.R                                                           |    4 
 gMCP-0.7-11/gMCP/R/graph2latex.R                                                            |   24 
 gMCP-0.7-11/gMCP/R/graphMCP.R                                                               |    2 
 gMCP-0.7-11/gMCP/R/graphTest.R                                                              |    2 
 gMCP-0.7-11/gMCP/R/misc.R                                                                   |   18 
 gMCP-0.7-11/gMCP/R/startGUIs.R                                                              |   11 
 gMCP-0.7-11/gMCP/R/subVariables.R                                                           |   34 -
 gMCP-0.7-11/gMCP/TODO                                                                       |   68 +-
 gMCP-0.7-11/gMCP/inst/doc/AQuickStart.Rnw                                                   |   22 
 gMCP-0.7-11/gMCP/inst/doc/AQuickStart.pdf                                                   |binary
 gMCP-0.7-11/gMCP/inst/doc/gMCP.pdf                                                          |binary
 gMCP-0.7-11/gMCP/inst/doc/gMCP/gMCP.Rnw                                                     |  291 ++++++----
 gMCP-0.7-11/gMCP/inst/doc/literatur.bib                                                     |   32 +
 gMCP-0.7-11/gMCP/inst/doc/parametric.Rnw                                                    |   57 +
 gMCP-0.7-11/gMCP/inst/doc/parametric.pdf                                                    |binary
 gMCP-0.7-11/gMCP/inst/doc/pictures/FullFeaturedGUI.png                                      |binary
 gMCP-0.7-11/gMCP/inst/doc/pictures/edge.png                                                 |binary
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 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/config/Configuration.java                        |    2 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/config/GeneralConfig.java                        |   18 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/ErrorDialogGMCP.java                         |    4 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/MenuBarMGraph.java                           |  140 ++--
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/datatable/DataTable.java                     |    5 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/datatable/RDataFrameRef.java                 |    4 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/AdjustedPValueDialog.java            |    2 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/AlternativesDialog.java              |only
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/GraphSendToArchiveDialog.java        |    2 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/GroupDialog.java                     |    6 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/MatrixCreationDialog.java            |   59 +-
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/PowerDialogParameterUncertainty.java |   84 ++
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/dialogs/RejectedDialog.java                  |   25 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/DView.java                             |   11 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/Edge.java                              |   25 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/EdgeWeight.java                        |   20 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/GraphView.java                         |  123 +++-
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/NetList.java                           |  129 +++-
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/NetListPopUpMenu.java                  |only
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/PPanel.java                            |   11 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/PView.java                             |   72 +-
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/UpdateEdge.java                        |   28 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/graph/UpdateNode.java                        |   11 
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 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/options/MiscPanel.java                       |    8 
 gMCP-0.7-11/gMCP/inst/java-src/org/af/gMCP/gui/options/NumericPanel.java                    |   15 
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 gMCP-0.7-11/gMCP/inst/java/gsrmtp.jar                                                       |binary
 gMCP-0.7-11/gMCP/inst/unitTests/runit.LaTeX.R                                               |   18 
 gMCP-0.7-11/gMCP/inst/unitTests/runit.correlation.R                                         |   29 
 gMCP-0.7-11/gMCP/inst/unitTests/runit.fastgMCP.R                                            |    2 
 gMCP-0.7-11/gMCP/inst/unitTests/runit.misc.R                                                |    7 
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 gMCP-0.7-11/gMCP/man/calcPower.Rd                                                           |    8 
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 gMCP-0.7-11/gMCP/man/doUnitTestsForGMCP.Rd                                                  |   36 -
 gMCP-0.7-11/gMCP/man/exampleGraphs.Rd                                                       |    7 
 gMCP-0.7-11/gMCP/man/gMCP-package.Rd                                                        |    4 
 gMCP-0.7-11/gMCP/man/gMCP.Rd                                                                |   73 +-
 gMCP-0.7-11/gMCP/man/generateBounds.Rd                                                      |   63 +-
 gMCP-0.7-11/gMCP/man/generatePvals.Rd                                                       |  166 +++--
 gMCP-0.7-11/gMCP/man/generateTest.Rd                                                        |   64 +-
 gMCP-0.7-11/gMCP/man/graphGUI.Rd                                                            |    4 
 gMCP-0.7-11/gMCP/man/replaceVariables.Rd                                                    |   11 
 97 files changed, 1841 insertions(+), 767 deletions(-)

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Package anametrix updated to version 1.4 with previous version 1.3 dated 2012-07-03

Title: Connects to Anametrix
Description: Bidirectional connector to Anametrix API.
Author: Roman Jugai
Maintainer: Roman Jugai

Diff between anametrix versions 1.3 dated 2012-07-03 and 1.4 dated 2012-07-21

 DESCRIPTION              |   10 +--
 MD5                      |    6 +-
 R/getAxDataset.R         |  119 ++++++++++++++++++++++-------------------------
 man/anametrix-package.Rd |    4 -
 4 files changed, 68 insertions(+), 71 deletions(-)

More information about anametrix at CRAN
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