Title: A package for graphical modelling in R
Diff between gRbase versions 1.6-0 dated 2012-07-31 and 1.6-1 dated 2012-08-04
Description: The gRbase package provides certain general constructs
which are used by other graphical modelling packages. This
includes 1) the concept of gmData (graphical meta data), 2)
several graph algorithms 3) facilities for table operations, 4)
functions for testing for conditional independence. gRbase also
illustrates how hierarchical log-linear models (hllm) may be
implemented.
Author: Søren Højsgaard
Maintainer: Søren Højsgaard
ChangeLog | 15 +++++++--
DESCRIPTION | 12 +++----
MD5 | 62 ++++++++++++++++++++---------------------
NAMESPACE | 1
inst/doc/gRbase-arrayops1.pdf |binary
inst/doc/gRbase-arrayops2.pdf |binary
inst/doc/gRbase-graphs.pdf |binary
inst/doc/gRbase-zzz.pdf |binary
man/DATA-mathmark.Rd | 2 -
man/GraphAlgo-edgeList.Rd | 2 -
man/GraphAlgo-glist2adjMAT.Rd | 2 -
man/GraphAlgo-mcs.Rd | 2 -
man/GraphAlgo-minimalTriang.Rd | 3 +
man/GraphAlgo-moralize.Rd | 2 -
man/GraphAlgo-mpd.Rd | 4 +-
man/GraphAlgo-querygraph.Rd | 2 -
man/GraphAlgo-rip.Rd | 2 -
man/GraphAlgo-triangulate.Rd | 2 -
man/ZOLD-gModel.Rd | 2 -
man/ZOLD-gRfit.Rd | 2 -
man/ZOLD-gmData.Rd | 2 -
man/ZOLD-hllm.Rd | 2 -
man/ZOLD-validVarTypes.Rd | 2 -
man/arrayCombine.Rd | 2 -
man/compareModels.Rd | 2 -
man/compile-propagate.Rd | 2 -
man/cov2pcor.Rd | 2 -
man/gRbase-utilities.Rd | 2 -
man/iplot.Rd | 4 --
man/parray.Rd | 2 -
man/removeRedundant.Rd | 2 -
man/ugdag.Rd | 2 -
32 files changed, 74 insertions(+), 69 deletions(-)
Title: Discrete Goodness-of-Fit Tests
Diff between dgof versions 1.0 dated 2011-09-01 and 1.1 dated 2012-08-04
Description: This package contains a proposed revision to the
stats::ks.test() function and the associated ks.test.Rd help
page. With one minor exception, it does not change the
existing behavior of ks.test(), and it adds features necessary
for doing one-sample tests with hypothesized discrete
distributions. The package also contains cvm.test(), for doing
one-sample Cramer-von Mises goodness-of-fit tests.
Author: Taylor B. Arnold, John W. Emerson, R Core Team and contributors
worldwide
Maintainer: Taylor B. Arnold
DESCRIPTION | 11 ++++++-----
MD5 | 10 ++++++----
NAMESPACE | 1 +
R/ks.test.R | 6 +++---
man/ks.test.Rd | 6 +++---
src |only
6 files changed, 19 insertions(+), 15 deletions(-)
Title: Analysis of habitat selection by animals
Diff between adehabitat versions 1.8.10 dated 2012-04-10 and 1.8.11 dated 2012-08-04
Description: A collection of tools for the analysis of habitat
selection by animals
Author: Clement Calenge, contributions from Mathieu Basille, Stephane
Dray and Scott Fortmann-Roe
Maintainer: Clement Calenge
DESCRIPTION | 8 ++++----
MD5 | 20 ++++++++++----------
demo/analysisltraj.r | 2 +-
man/biv.test.Rd | 2 +-
man/enfa.Rd | 2 +-
man/hist.kasc.Rd | 2 +-
man/histniche.Rd | 2 +-
man/niche.test.Rd | 2 +-
man/predict.enfa.Rd | 2 +-
man/scatter.enfa.Rd | 2 +-
man/scatterniche.Rd | 2 +-
11 files changed, 23 insertions(+), 23 deletions(-)
Title: Collection of utility and convenience functions.
Diff between taRifx versions 1.0.3 dated 2012-05-31 and 1.0.4 dated 2012-08-04
Description: A collection of various utility and convenience functions.
Author: Ari B. Friedman
Maintainer: Ari B. Friedman
taRifx-1.0.3/taRifx/R/R-GIS.R |only
taRifx-1.0.3/taRifx/man/SLDFtoLine.Rd |only
taRifx-1.0.3/taRifx/man/SPDFareas.Rd |only
taRifx-1.0.3/taRifx/man/SPDFtoPointsDF.Rd |only
taRifx-1.0.3/taRifx/man/as.data.table.by.Rd |only
taRifx-1.0.3/taRifx/man/cleanLatLon.Rd |only
taRifx-1.0.3/taRifx/man/countPointsInPolys.Rd |only
taRifx-1.0.3/taRifx/man/cumDist.Rd |only
taRifx-1.0.3/taRifx/man/interpolatePathpoints.Rd |only
taRifx-1.0.3/taRifx/man/lineDist.Rd |only
taRifx-1.0.3/taRifx/man/panel.ecdf.Rd |only
taRifx-1.0.3/taRifx/man/pointDistPairwise.Rd |only
taRifx-1.0.3/taRifx/man/pointgrid2SpatialPolygons.Rd |only
taRifx-1.0.3/taRifx/man/reshapeSLDF.Rd |only
taRifx-1.0.3/taRifx/man/roundnear.Rd |only
taRifx-1.0.3/taRifx/man/simpledist.Rd |only
taRifx-1.0.3/taRifx/man/smoothLines.Rd |only
taRifx-1.0.3/taRifx/man/subsetSPDF.Rd |only
taRifx-1.0.3/taRifx/man/taRifx-package.Rd |only
taRifx-1.0.4/taRifx/ChangeLog | 7
taRifx-1.0.4/taRifx/DESCRIPTION | 21
taRifx-1.0.4/taRifx/MD5 | 95 +-
taRifx-1.0.4/taRifx/NAMESPACE | 64 +
taRifx-1.0.4/taRifx/R/Contributed.R | 439 ++++++----
taRifx-1.0.4/taRifx/R/Rfunctions.R | 770 ++++++++++++++++---
taRifx-1.0.4/taRifx/man/as.data.frame.by.Rd |only
taRifx-1.0.4/taRifx/man/as.matrix.by.Rd |only
taRifx-1.0.4/taRifx/man/autoplot.microbenchmark.Rd | 23
taRifx-1.0.4/taRifx/man/between.Rd | 50 -
taRifx-1.0.4/taRifx/man/bytable.Rd | 59 -
taRifx-1.0.4/taRifx/man/categorize.Rd | 77 -
taRifx-1.0.4/taRifx/man/cleanTurked.Rd | 39
taRifx-1.0.4/taRifx/man/compareplot.Rd | 156 +--
taRifx-1.0.4/taRifx/man/daysofweek.Rd | 35
taRifx-1.0.4/taRifx/man/destring.Rd | 28
taRifx-1.0.4/taRifx/man/distinct.Rd | 46 -
taRifx-1.0.4/taRifx/man/evens.Rd | 23
taRifx-1.0.4/taRifx/man/expandDF.Rd | 59 -
taRifx-1.0.4/taRifx/man/fpart.Rd | 22
taRifx-1.0.4/taRifx/man/hist_horiz.Rd | 36
taRifx-1.0.4/taRifx/man/homogenous.Rd | 26
taRifx-1.0.4/taRifx/man/japply.Rd | 21
taRifx-1.0.4/taRifx/man/last.Rd | 23
taRifx-1.0.4/taRifx/man/latex.table.by.Rd | 42 -
taRifx-1.0.4/taRifx/man/middle.group.Rd | 39
taRifx-1.0.4/taRifx/man/panelfxns.Rd |only
taRifx-1.0.4/taRifx/man/readdir.Rd |only
taRifx-1.0.4/taRifx/man/remove.factors.Rd | 19
taRifx-1.0.4/taRifx/man/rep_along.Rd | 47 -
taRifx-1.0.4/taRifx/man/reshapeasy.Rd | 54 -
taRifx-1.0.4/taRifx/man/rounding.Rd |only
taRifx-1.0.4/taRifx/man/searchPattern.Rd | 28
taRifx-1.0.4/taRifx/man/shift.Rd | 52 -
taRifx-1.0.4/taRifx/man/sort.data.frame.Rd | 79 -
taRifx-1.0.4/taRifx/man/splitc.Rd | 131 +--
taRifx-1.0.4/taRifx/man/stack.list.Rd | 22
taRifx-1.0.4/taRifx/man/title.page.new.Rd | 32
taRifx-1.0.4/taRifx/man/trues.Rd | 28
taRifx-1.0.4/taRifx/man/write.sanitized.csv.Rd |only
taRifx-1.0.4/taRifx/man/xtable.lme.Rd | 72 -
taRifx-1.0.4/taRifx/man/xtablelm.Rd | 35
61 files changed, 1674 insertions(+), 1125 deletions(-)
Title: Interface between R and the Google Visualisation API
Diff between googleVis versions 0.2.16 dated 2012-06-02 and 0.2.17 dated 2012-08-04
Description: The googleVis package provides an interface between R and
the Google Visualisation API. With the googleVis package users
can easily create web pages with interactive charts based on R
data frames and display them either via the local R HTTP help
server or within their own sites, without uploading the data to
Google. A browser with Flash and Internet connection is
required. Please visit the project web site for more
information and examples.
Author: Markus Gesmann, Diego de Castillo
Maintainer: Markus Gesmann
googleVis-0.2.16/googleVis/inst/gadgets/.Rhistory |only
googleVis-0.2.17/googleVis/DESCRIPTION | 11
googleVis-0.2.17/googleVis/MD5 | 26 +-
googleVis-0.2.17/googleVis/NEWS | 18 +
googleVis-0.2.17/googleVis/R/gvis.R | 7
googleVis-0.2.17/googleVis/THANKS | 2
googleVis-0.2.17/googleVis/inst/doc/googleVis.Rnw | 119 +++++++++-
googleVis-0.2.17/googleVis/inst/doc/googleVis.pdf |binary
googleVis-0.2.17/googleVis/man/googleVis-package.Rd | 5
googleVis-0.2.17/googleVis/man/gvisGeoChart.Rd | 14 +
googleVis-0.2.17/googleVis/man/gvisGeoMap.Rd | 3
googleVis-0.2.17/googleVis/man/gvisMerge.Rd | 6
googleVis-0.2.17/googleVis/vignettes/CambR_googleVis_29_May_2012.png |only
googleVis-0.2.17/googleVis/vignettes/Rook.png |only
googleVis-0.2.17/googleVis/vignettes/googleVis.Rnw | 119 +++++++++-
googleVis-0.2.17/googleVis/vignettes/googleVis.bib | 28 ++
16 files changed, 317 insertions(+), 41 deletions(-)
Title: Lasso and elastic-net penalized Cox's regression in high
dimensions models using the cocktail algorithm
Diff between fastcox versions 1.0.0 dated 2012-03-26 and 1.0.1 dated 2012-08-04
Description: We implement a cocktail algorithm, a good mixture of
coordinate decent, the majorization-minimization principle and
the strong rule, for computing the solution paths of the
elastic net penalized Cox's proportional hazards model.
Author: Yi Yang
Maintainer: Yi Yang
ChangeLog | 5 +++--
DESCRIPTION | 6 +++---
MD5 | 18 +++++++++---------
R/auxiliary.R | 4 ++--
man/FHT.Rd | 12 ++++++------
man/cocktail-package.Rd | 8 +++++---
man/cocktail.Rd | 9 ++++-----
man/plot.cocktail.Rd | 16 ++++++++--------
man/predict.cocktail.Rd | 17 ++++++++---------
man/print.cocktail.Rd | 17 ++++++++---------
10 files changed, 56 insertions(+), 56 deletions(-)