Title: Topic models
Diff between topicmodels versions 0.1-6 dated 2012-06-15 and 0.1-7 dated 2012-08-23
Description: Provides an interface to the C code for Latent Dirichlet
Allocation (LDA) models and Correlated Topics Models (CTM) by
David M. Blei and co-authors and the C++ code for fitting LDA
models using Gibbs sampling by Xuan-Hieu Phan and co-authors.
Author: Bettina Grün and Kurt Hornik
Maintainer: Bettina Grün
DESCRIPTION | 8 ++++----
MD5 | 14 +++++++-------
NEWS | 5 +++++
inst/NEWS | 5 +++++
inst/doc/topicmodels.pdf |binary
src/lda-model.c | 16 ++++++++++++++++
src/lda-model.h | 1 +
src/rlda.c | 16 ++++++++++------
8 files changed, 48 insertions(+), 17 deletions(-)
Title: Ridge Regression with automatic selection of the penalty
parameter
Diff between ridge versions 2.0 dated 2012-08-15 and 2.1-1 dated 2012-08-23
Description: Linear and logistic ridge regression for small data sets
and genome-wide SNP data
Author: Erika Cule
Maintainer: Erika Cule
ChangeLog | 12 ++++
DESCRIPTION | 6 +-
MD5 | 102 +++++++++++++++++++----------------
R/linearRidgeGenotypes.R | 2
R/linearRidgeGenotypes.R.in |only
R/linearRidgeGenotypesPredict.R | 2
R/linearRidgeGenotypesPredict.R.in |only
R/logisticRidge.R | 12 ++++
R/logisticRidgeGenotypes.R | 2
R/logisticRidgeGenotypes.R.in |only
R/logisticRidgeGenotypesPredict.R | 2
R/logisticRidgeGenotypesPredict.R.in |only
R/plot.ridgeLinear.R | 2
R/plot.ridgeLogistic.R | 2
R/summary.ridgeLinear.R | 2
cleanup |only
configure |only
configure.ac |only
man/Gorman.Rd | 17 ++---
man/Hald.Rd | 9 ---
man/linearRidgeGenotypes.Rd | 47 +++++++++-------
man/linearRidgeGenotypesPredict.Rd | 38 +++++++------
man/logisticRidge.Rd | 2
man/logisticRidgeGenotypes.Rd | 55 ++++++++++--------
man/logisticRidgeGenotypesPredict.Rd | 47 ++++++++--------
man/pvals.Rd | 2
man/ridge-internal.Rd | 2
man/ridge-package.Rd | 2
src/Makevars | 11 ++-
src/Makevars.in |only
src/Makevars.win | 3 +
src/ReadInData.c | 6 --
src/ReadInData.h | 2
src/commonFunctions.c | 8 ++
src/commonFunctions.h | 3 +
src/computeLinearRidge.c | 2
src/computeLinearRidge.h | 17 +----
src/computePvals.c | 25 +++++++-
src/computePvals.h | 15 +----
src/config.h |only
src/config.h.in |only
src/coordinateDescent.c | 2
src/coordinateDescent.h | 6 +-
src/depends.h | 21 ++++++-
src/linear.c | 19 +++++-
src/linear.h | 5 +
src/linearFunctions.c | 2
src/linearFunctions.h | 4 +
src/logistic.c | 22 +++++--
src/logistic.h | 8 +-
src/logisticFunctions.c | 3 +
src/logisticFunctions.h | 3 +
src/regression_wrapper_function.c | 5 +
src/ridgeRegressionFunctions.c | 6 +-
src/ridgeRegressionFunctions.h | 8 ++
src/thin.c | 3 +
src/thin.h | 6 +-
57 files changed, 368 insertions(+), 214 deletions(-)
Title: Inference for Phase-type Distributions
Diff between PhaseType versions 0.1.0 dated 2011-10-12 and 0.1.1 dated 2012-08-23
Description: Functions to perform Bayesian inference on absorption time
data for Phase-type distributions. Plans to expand this to
include frequentist inference and simulation tools.
Author: Louis Aslett
Maintainer: Louis Aslett
DESCRIPTION | 6
MD5 | 18 +-
NEWS | 6
R/plot.phtMCMC.R | 10 -
src/LJMA_arms.c | 13 -
src/Simulate_AbsCTMC_eq_AslettHobolth_DCS.c | 1
src/Simulate_AbsCTMC_eq_Aslett_ECS.c | 4
src/Simulate_AbsCTMC_gt_Hobolth_DCS.c | 4
src/utility.c | 209 ++++++++++++++++++++++++++++
src/utility.h | 2
10 files changed, 244 insertions(+), 29 deletions(-)
Title: Tools for analysing OmniLog(R) Phenotype Microarray data
Diff between opm versions 0.5-0 dated 2012-05-20 and 0.6-0 dated 2012-08-23
Description: Tools for analysing OmniLog(R) Phenotype Microarray (PM)
data as produced by the device distributed by BiOLOG Inc.,
including plotting, aggregating (estimating curve parameters),
comparing and discretizing PM data, creating phylogenetic
formats and reports for taxonomic journals, integrating
metadata, using the YAML format for the storage of data and
metadata, and batch conversion of large numbers of files.
Author: Markus Goeker, with contributions by Lea A.I. Vaas, Johannes
Sikorski, Nora Buddruhs and Anne Fiebig
Maintainer: Markus Goeker
opm-0.5-0/opm/R/helpers.R |only
opm-0.5-0/opm/R/list.R |only
opm-0.5-0/opm/R/matrix.R |only
opm-0.5-0/opm/R/numeric.R |only
opm-0.5-0/opm/R/opm.R |only
opm-0.5-0/opm/R/opma.R |only
opm-0.5-0/opm/R/opms.R |only
opm-0.5-0/opm/R/opmx.R |only
opm-0.5-0/opm/R/phylo.R |only
opm-0.5-0/opm/R/wmd.R |only
opm-0.5-0/opm/R/yaml.R |only
opm-0.5-0/opm/man/assert_length.Rd |only
opm-0.5-0/opm/man/pe_and_ci.boot.Rd |only
opm-0.6-0/opm/ChangeLog |only
opm-0.6-0/opm/DESCRIPTION | 18 -
opm-0.6-0/opm/MD5 | 245 ++++++++++++-----------
opm-0.6-0/opm/NAMESPACE | 7
opm-0.6-0/opm/NEWS | 33 +++
opm-0.6-0/opm/R/aggregation.R |only
opm-0.6-0/opm/R/auxiliary.R |only
opm-0.6-0/opm/R/classes.R |only
opm-0.6-0/opm/R/combination.R |only
opm-0.6-0/opm/R/constants.R | 121 ++++-------
opm-0.6-0/opm/R/conversion.R |only
opm-0.6-0/opm/R/data.R | 3
opm-0.6-0/opm/R/getter.R |only
opm-0.6-0/opm/R/io.R | 104 ++++++----
opm-0.6-0/opm/R/kmeans.R |only
opm-0.6-0/opm/R/metadata.R |only
opm-0.6-0/opm/R/naming.R |only
opm-0.6-0/opm/R/phylogeny.R |only
opm-0.6-0/opm/R/plotting.R |only
opm-0.6-0/opm/R/substrate-info.R |only
opm-0.6-0/opm/R/testing.R | 4
opm-0.6-0/opm/R/well-map.R | 299 ++++++++++++++---------------
opm-0.6-0/opm/inst/scripts/run_opm.R | 2
opm-0.6-0/opm/man/L.Rd |only
opm-0.6-0/opm/man/LL.Rd |only
opm-0.6-0/opm/man/MOA.Rd | 34 +--
opm-0.6-0/opm/man/OPM.Rd | 104 +++++-----
opm-0.6-0/opm/man/OPMA.Rd | 30 +-
opm-0.6-0/opm/man/OPMS.Rd | 164 ++++++++-------
opm-0.6-0/opm/man/OPMX.Rd | 24 +-
opm-0.6-0/opm/man/WMD.Rd | 62 +++---
opm-0.6-0/opm/man/YAML_VIA_LIST.Rd | 18 -
opm-0.6-0/opm/man/aggr_settings.Rd | 14 -
opm-0.6-0/opm/man/aggregated.Rd | 12 -
opm-0.6-0/opm/man/anyDuplicated.Rd | 20 +
opm-0.6-0/opm/man/assert_class.Rd |only
opm-0.6-0/opm/man/batch_collect.Rd | 11 -
opm-0.6-0/opm/man/batch_opm_to_yaml.Rd | 11 -
opm-0.6-0/opm/man/batch_process.Rd | 16 -
opm-0.6-0/opm/man/best_cutoff.Rd |only
opm-0.6-0/opm/man/ci_plot.Rd | 13 -
opm-0.6-0/opm/man/clean_filenames.Rd | 6
opm-0.6-0/opm/man/collect_template.Rd | 21 --
opm-0.6-0/opm/man/contains.Rd | 6
opm-0.6-0/opm/man/csv_data.Rd | 8
opm-0.6-0/opm/man/default_color_regions.Rd | 9
opm-0.6-0/opm/man/dim.Rd | 8
opm-0.6-0/opm/man/discrete.Rd | 4
opm-0.6-0/opm/man/do_aggr.Rd | 10
opm-0.6-0/opm/man/duplicated.Rd | 20 +
opm-0.6-0/opm/man/explode_dir.Rd | 5
opm-0.6-0/opm/man/extract.Rd | 7
opm-0.6-0/opm/man/extract_columns.Rd | 24 --
opm-0.6-0/opm/man/fast_estimate.Rd | 3
opm-0.6-0/opm/man/file_pattern.Rd | 11 -
opm-0.6-0/opm/man/filename.Rd | 8
opm-0.6-0/opm/man/find_positions.Rd | 1
opm-0.6-0/opm/man/find_substrate.Rd | 19 +
opm-0.6-0/opm/man/flatten.Rd | 32 ++-
opm-0.6-0/opm/man/gen_iii.Rd | 8
opm-0.6-0/opm/man/glob_to_regex.Rd | 14 -
opm-0.6-0/opm/man/group_by_sep.Rd | 4
opm-0.6-0/opm/man/has_aggr.Rd | 8
opm-0.6-0/opm/man/heat_map.Rd | 1
opm-0.6-0/opm/man/hours.Rd | 8
opm-0.6-0/opm/man/include_metadata.Rd | 12 -
opm-0.6-0/opm/man/indexes.Rd |only
opm-0.6-0/opm/man/infix.k.Rd | 24 +-
opm-0.6-0/opm/man/infix.largek.Rd | 24 +-
opm-0.6-0/opm/man/infix.largeq.Rd | 24 +-
opm-0.6-0/opm/man/infix.q.Rd | 24 +-
opm-0.6-0/opm/man/insert.Rd | 9
opm-0.6-0/opm/man/is_constant.Rd | 2
opm-0.6-0/opm/man/join_discrete.Rd | 2
opm-0.6-0/opm/man/kubrick.Rd | 6
opm-0.6-0/opm/man/length.Rd | 8
opm-0.6-0/opm/man/level_plot.Rd | 28 ++
opm-0.6-0/opm/man/listing.Rd | 7
opm-0.6-0/opm/man/map_metadata.Rd | 13 -
opm-0.6-0/opm/man/map_names.Rd | 6
opm-0.6-0/opm/man/map_values.Rd | 6
opm-0.6-0/opm/man/max.Rd | 8
opm-0.6-0/opm/man/max_rgb_contrast.Rd | 1
opm-0.6-0/opm/man/measurements.Rd | 8
opm-0.6-0/opm/man/merge.Rd | 22 +-
opm-0.6-0/opm/man/metadata.Rd | 26 --
opm-0.6-0/opm/man/metadata.set.Rd | 55 ++---
opm-0.6-0/opm/man/metadata_chars.Rd | 15 -
opm-0.6-0/opm/man/minmax.Rd | 8
opm-0.6-0/opm/man/mypdf.Rd |only
opm-0.6-0/opm/man/oapply.Rd | 6
opm-0.6-0/opm/man/opm.package.Rd | 8
opm-0.6-0/opm/man/opm_files.Rd | 9
opm-0.6-0/opm/man/opm_opt.Rd |only
opm-0.6-0/opm/man/paper_size.Rd |only
opm-0.6-0/opm/man/param_names.Rd | 3
opm-0.6-0/opm/man/parse_time.Rd |only
opm-0.6-0/opm/man/pe_and_ci.Rd |only
opm-0.6-0/opm/man/phylo_data.Rd | 22 --
opm-0.6-0/opm/man/plate_type.Rd | 13 +
opm-0.6-0/opm/man/plates.Rd | 6
opm-0.6-0/opm/man/position.Rd | 8
opm-0.6-0/opm/man/radial_plot.Rd | 5
opm-0.6-0/opm/man/read_opm.Rd | 8
opm-0.6-0/opm/man/read_single_opm.Rd | 5
opm-0.6-0/opm/man/rep.Rd |only
opm-0.6-0/opm/man/rev.Rd |only
opm-0.6-0/opm/man/safe_labels.Rd | 4
opm-0.6-0/opm/man/select.Rd | 12 -
opm-0.6-0/opm/man/select_colors.Rd | 7
opm-0.6-0/opm/man/separate.Rd | 11 -
opm-0.6-0/opm/man/seq.Rd | 8
opm-0.6-0/opm/man/setup_time.Rd | 12 -
opm-0.6-0/opm/man/show.Rd | 8
opm-0.6-0/opm/man/sort.Rd | 71 +++++-
opm-0.6-0/opm/man/source_location.Rd | 3
opm-0.6-0/opm/man/split_files.Rd | 5
opm-0.6-0/opm/man/substrate_info.Rd |only
opm-0.6-0/opm/man/summary.Rd | 10
opm-0.6-0/opm/man/test_file_dir.Rd | 3
opm-0.6-0/opm/man/thin_out.Rd | 18 -
opm-0.6-0/opm/man/to_metadata.Rd | 19 -
opm-0.6-0/opm/man/to_yaml.Rd | 6
opm-0.6-0/opm/man/vaas_1.Rd | 3
opm-0.6-0/opm/man/vaas_4.Rd | 3
opm-0.6-0/opm/man/vaas_et_al.Rd | 3
opm-0.6-0/opm/man/well.Rd | 8
opm-0.6-0/opm/man/well_to_substrate.Rd | 3
opm-0.6-0/opm/man/wells.Rd | 8
opm-0.6-0/opm/man/xy_plot.Rd | 9
143 files changed, 1224 insertions(+), 1055 deletions(-)
More information about FinancialInstrument at CRAN
Permanent link
Title: Solving and Optimizing Large-Scale Nonlinear Systems
Diff between BB versions 2012.3-1 dated 2012-03-28 and 2012.8-1 dated 2012-08-23
Description: Barzilai-Borwein spectral methods for solving nonlinear
system of equations, and for optimizing nonlinear objective
functions subject to simple constraints. A tutorial style
introduction to this package is available in a vignette on the
CRAN download page or, when the package is loaded in an R
session, with vignette("BB").
Author: Ravi Varadhan
Maintainer: Paul Gilbert
DESCRIPTION | 10 +++++-----
MD5 | 16 ++++++++--------
NEWS | 8 ++++++++
R/BBoptim.R | 5 +++--
R/spg.R | 5 +++--
inst/doc/BB.pdf |binary
inst/doc/BBvignetteJSS.pdf |binary
man/BBoptim.Rd | 10 ++++++++--
man/spg.Rd | 3 +++
9 files changed, 38 insertions(+), 19 deletions(-)
Title: Principal Tensor Analysis on k modes
Diff between PTAk versions 1.2-5 dated 2012-03-08 and 1.2-6 dated 2012-08-23
Description: A multiway method to decompose a tensor (array) of any
order, as a generalisation of SVD also supporting non-identity
metrics and penalisations. 2-way SVD with these extensions is
also available. The package includes also some other multiway
methods: PCAn (Tucker-n) and PARAFAC/CANDECOMP with these
extensions.
Author: Didier Leibovici
Maintainer: Didier Leibovici
PTAk-1.2-5/PTAk/CONTENTS |only
PTAk-1.2-6/PTAk/DESCRIPTION | 8 -
PTAk-1.2-6/PTAk/MD5 | 15 +-
PTAk-1.2-6/PTAk/NAMESPACE | 2
PTAk-1.2-6/PTAk/R/PTAk.R | 266 +++++++++++++++++++++++++++---------
PTAk-1.2-6/PTAk/inst/CITATION | 3
PTAk-1.2-6/PTAk/man/COS2CTR.PTAk.Rd |only
PTAk-1.2-6/PTAk/man/FCA2.Rd |only
PTAk-1.2-6/PTAk/man/SVDgen.Rd | 13 -
PTAk-1.2-6/PTAk/man/plot.PTAk.Rd | 15 +-
10 files changed, 232 insertions(+), 90 deletions(-)
Title: Simulating Data to Study Performance of Clustering Algorithms
Diff between MixSim versions 1.0-5 dated 2012-08-16 and 1.0-7 dated 2012-08-23
Description: MixSim allows simulating mixtures of Gaussian
distributions with different levels of overlap between mixture
components. Pairwise overlap, defined as a sum of two
misclassification probabilities, measures the degree of
interaction between components and can be readily employed to
control the clustering complexity of datasets simulated from
mixtures. These datasets can then be used for systematic
performance investigation of clustering and finite mixture
modeling algorithms. Among other capabilities of MixSim, there
are computing the exact overlap for Gaussian mixtures,
simulating Gaussian and non-Gaussian data, simulating outliers
and noise variables, calculating various measures of agreement
between two partitionings, and constructing parallel
distribution plots for the graphical display of finite mixture
models.
Author: Volodymyr Melnykov, Wei-Chen Chen, and Ranjan Maitra
Maintainer: Volodymyr Melnykov
ChangeLog | 3 +++
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
R/main.R | 14 +++++++-------
src/libOverlap.c | 18 +++++-------------
5 files changed, 23 insertions(+), 28 deletions(-)
Title: Spatial Point Pattern analysis, model-fitting, simulation, tests
Diff between spatstat versions 1.28-1 dated 2012-06-29 and 1.28-2 dated 2012-08-23
Description: A package for analysing spatial data, mainly Spatial Point
Patterns, including multitype/marked points and spatial
covariates, in any two-dimensional spatial region. Also
supports three-dimensional point patterns, and space-time point
patterns in any number of dimensions. Contains over 1000
functions for plotting spatial data, exploratory data analysis,
model-fitting, simulation, spatial sampling, model diagnostics,
and formal inference. Data types include point patterns, line
segment patterns, spatial windows, pixel images and
tessellations. Exploratory methods include K-functions,
nearest neighbour distance and empty space statistics, Fry
plots, pair correlation function, kernel smoothed intensity,
relative risk estimation with cross-validated bandwidth
selection, mark correlation functions, segregation indices,
mark dependence diagnostics etc. Point process models can be
fitted to point pattern data using functions ppm, kppm, slrm
similar to glm. Models may include dependence on covariates,
interpoint interaction, cluster formation and dependence on
marks. Fitted models can be simulated automatically. Also
provides facilities for formal inference (such as chi-squared
tests) and model diagnostics (including simulation envelopes,
residuals, residual plots and Q-Q plots).
Author: Adrian Baddeley
Maintainer: Adrian Baddeley
spatstat-1.28-1/spatstat/man/clf.test.Rd |only
spatstat-1.28-2/spatstat/DESCRIPTION | 18
spatstat-1.28-2/spatstat/MD5 | 406 +++++++++---------
spatstat-1.28-2/spatstat/NEWS | 192 ++++++++
spatstat-1.28-2/spatstat/R/Kcom.R | 2
spatstat-1.28-2/spatstat/R/Kest.R | 12
spatstat-1.28-2/spatstat/R/Kinhom.R | 4
spatstat-1.28-2/spatstat/R/Kmulti.R | 6
spatstat-1.28-2/spatstat/R/Kmulti.inhom.R | 4
spatstat-1.28-2/spatstat/R/Kscaled.R | 4
spatstat-1.28-2/spatstat/R/Tstat.R | 4
spatstat-1.28-2/spatstat/R/addvar.R |only
spatstat-1.28-2/spatstat/R/affine.R | 13
spatstat-1.28-2/spatstat/R/allstats.R | 2
spatstat-1.28-2/spatstat/R/alltypes.R | 2
spatstat-1.28-2/spatstat/R/bermantest.R | 12
spatstat-1.28-2/spatstat/R/bw.optim.R | 2
spatstat-1.28-2/spatstat/R/clarkevans.R | 2
spatstat-1.28-2/spatstat/R/clftest.R | 10
spatstat-1.28-2/spatstat/R/colourtables.R | 2
spatstat-1.28-2/spatstat/R/dclftest.R |only
spatstat-1.28-2/spatstat/R/dg.R | 11
spatstat-1.28-2/spatstat/R/dgs.R | 5
spatstat-1.28-2/spatstat/R/distfun.R | 2
spatstat-1.28-2/spatstat/R/dummy.R | 2
spatstat-1.28-2/spatstat/R/edgeRipley.R | 291 ++++++------
spatstat-1.28-2/spatstat/R/effectfun.R | 4
spatstat-1.28-2/spatstat/R/envelope.R | 96 ++--
spatstat-1.28-2/spatstat/R/envelope3.R | 9
spatstat-1.28-2/spatstat/R/envelopelpp.R | 14
spatstat-1.28-2/spatstat/R/exactMPLEstrauss.R | 9
spatstat-1.28-2/spatstat/R/fasp.R | 2
spatstat-1.28-2/spatstat/R/fgk3.R | 10
spatstat-1.28-2/spatstat/R/fiksel.R | 19
spatstat-1.28-2/spatstat/R/formulae.R | 9
spatstat-1.28-2/spatstat/R/fryplot.R | 2
spatstat-1.28-2/spatstat/R/fv.R | 120 +++--
spatstat-1.28-2/spatstat/R/hyperframe.R | 4
spatstat-1.28-2/spatstat/R/images.R | 2
spatstat-1.28-2/spatstat/R/intensity.R | 11
spatstat-1.28-2/spatstat/R/iplot.R | 2
spatstat-1.28-2/spatstat/R/is.subset.owin.R | 9
spatstat-1.28-2/spatstat/R/istat.R | 2
spatstat-1.28-2/spatstat/R/kppm.R | 4
spatstat-1.28-2/spatstat/R/kstest.R | 16
spatstat-1.28-2/spatstat/R/layered.R | 2
spatstat-1.28-2/spatstat/R/leverage.R | 6
spatstat-1.28-2/spatstat/R/linim.R | 9
spatstat-1.28-2/spatstat/R/linnet.R | 2
spatstat-1.28-2/spatstat/R/listof.R | 4
spatstat-1.28-2/spatstat/R/localK.R | 4
spatstat-1.28-2/spatstat/R/localpcf.R | 15
spatstat-1.28-2/spatstat/R/lohboot.R | 4
spatstat-1.28-2/spatstat/R/lppm.R | 2
spatstat-1.28-2/spatstat/R/markcorr.R | 4
spatstat-1.28-2/spatstat/R/marks.R | 4
spatstat-1.28-2/spatstat/R/measures.R | 2
spatstat-1.28-2/spatstat/R/mincontrast.R | 22
spatstat-1.28-2/spatstat/R/morishita.R | 2
spatstat-1.28-2/spatstat/R/morphology.R | 2
spatstat-1.28-2/spatstat/R/mpl.R | 14
spatstat-1.28-2/spatstat/R/multipair.util.R | 2
spatstat-1.28-2/spatstat/R/multistrhard.R | 4
spatstat-1.28-2/spatstat/R/options.R | 2
spatstat-1.28-2/spatstat/R/pairpiece.R | 8
spatstat-1.28-2/spatstat/R/pairwise.family.R | 2
spatstat-1.28-2/spatstat/R/parres.R |only
spatstat-1.28-2/spatstat/R/pcf.R | 131 +++--
spatstat-1.28-2/spatstat/R/pcfinhom.R | 4
spatstat-1.28-2/spatstat/R/pcfmulti.inhom.R | 4
spatstat-1.28-2/spatstat/R/pickoption.R | 2
spatstat-1.28-2/spatstat/R/plot.fv.R | 234 ++++++----
spatstat-1.28-2/spatstat/R/plot.im.R | 2
spatstat-1.28-2/spatstat/R/plot.owin.R | 2
spatstat-1.28-2/spatstat/R/plot.ppp.R | 2
spatstat-1.28-2/spatstat/R/plot.splitppp.R | 4
spatstat-1.28-2/spatstat/R/pp3.R | 2
spatstat-1.28-2/spatstat/R/ppm.R | 15
spatstat-1.28-2/spatstat/R/ppp.R | 20
spatstat-1.28-2/spatstat/R/pppmatch.R | 2
spatstat-1.28-2/spatstat/R/ppx.R | 11
spatstat-1.28-2/spatstat/R/profilepl.R | 25 -
spatstat-1.28-2/spatstat/R/psp.R | 19
spatstat-1.28-2/spatstat/R/psst.R | 7
spatstat-1.28-2/spatstat/R/quadclass.R | 10
spatstat-1.28-2/spatstat/R/quadratcount.R | 2
spatstat-1.28-2/spatstat/R/quadrattest.R | 366 ++++++++++------
spatstat-1.28-2/spatstat/R/random.R | 14
spatstat-1.28-2/spatstat/R/randommk.R | 10
spatstat-1.28-2/spatstat/R/rescale.R | 14
spatstat-1.28-2/spatstat/R/resolve.defaults.R | 18
spatstat-1.28-2/spatstat/R/rho2hat.R | 8
spatstat-1.28-2/spatstat/R/rhohat.R | 6
spatstat-1.28-2/spatstat/R/ripras.R | 17
spatstat-1.28-2/spatstat/R/rmh.default.R | 220 +++++++--
spatstat-1.28-2/spatstat/R/rmh.ppm.R | 90 +++
spatstat-1.28-2/spatstat/R/rmhcontrol.R | 27 -
spatstat-1.28-2/spatstat/R/rmhstart.R | 7
spatstat-1.28-2/spatstat/R/scanstat.R | 4
spatstat-1.28-2/spatstat/R/slrm.R | 6
spatstat-1.28-2/spatstat/R/softcore.R | 125 +++--
spatstat-1.28-2/spatstat/R/suffstat.R | 2
spatstat-1.28-2/spatstat/R/tess.R | 2
spatstat-1.28-2/spatstat/R/transect.R | 4
spatstat-1.28-2/spatstat/R/triplets.R | 18
spatstat-1.28-2/spatstat/R/update.ppm.R | 2
spatstat-1.28-2/spatstat/R/util.R | 8
spatstat-1.28-2/spatstat/R/vcov.ppm.R | 2
spatstat-1.28-2/spatstat/R/window.R | 6
spatstat-1.28-2/spatstat/data/amacrine.rda |binary
spatstat-1.28-2/spatstat/data/anemones.rda |binary
spatstat-1.28-2/spatstat/data/ants.rda |binary
spatstat-1.28-2/spatstat/data/bei.rda |binary
spatstat-1.28-2/spatstat/data/betacells.rda |binary
spatstat-1.28-2/spatstat/data/bramblecanes.rda |binary
spatstat-1.28-2/spatstat/data/bronzefilter.rda |binary
spatstat-1.28-2/spatstat/data/cells.rda |binary
spatstat-1.28-2/spatstat/data/chicago.rda |binary
spatstat-1.28-2/spatstat/data/chorley.rda |binary
spatstat-1.28-2/spatstat/data/copper.rda |binary
spatstat-1.28-2/spatstat/data/datalist | 5
spatstat-1.28-2/spatstat/data/demopat.rda |binary
spatstat-1.28-2/spatstat/data/finpines.rda |binary
spatstat-1.28-2/spatstat/data/flu.rda |binary
spatstat-1.28-2/spatstat/data/ganglia.rda |binary
spatstat-1.28-2/spatstat/data/gorillas.rda |binary
spatstat-1.28-2/spatstat/data/hamster.rda |binary
spatstat-1.28-2/spatstat/data/heather.rda |binary
spatstat-1.28-2/spatstat/data/humberside.rda |binary
spatstat-1.28-2/spatstat/data/japanesepines.rda |binary
spatstat-1.28-2/spatstat/data/lansing.rda |binary
spatstat-1.28-2/spatstat/data/letterR.rda |binary
spatstat-1.28-2/spatstat/data/longleaf.rda |binary
spatstat-1.28-2/spatstat/data/mucosa.rda |only
spatstat-1.28-2/spatstat/data/murchison.rda |binary
spatstat-1.28-2/spatstat/data/nbfires.rda |binary
spatstat-1.28-2/spatstat/data/nztrees.rda |binary
spatstat-1.28-2/spatstat/data/osteo.rda |binary
spatstat-1.28-2/spatstat/data/ponderosa.rda |binary
spatstat-1.28-2/spatstat/data/redwood.rda |binary
spatstat-1.28-2/spatstat/data/redwoodfull.rda |binary
spatstat-1.28-2/spatstat/data/residualspaper.rda |binary
spatstat-1.28-2/spatstat/data/shapley.rda |binary
spatstat-1.28-2/spatstat/data/simdat.rda |binary
spatstat-1.28-2/spatstat/data/simplenet.rda |binary
spatstat-1.28-2/spatstat/data/spruces.rda |binary
spatstat-1.28-2/spatstat/data/swedishpines.rda |binary
spatstat-1.28-2/spatstat/data/urkiola.rda |binary
spatstat-1.28-2/spatstat/demo/data.R | 7
spatstat-1.28-2/spatstat/inst/doc/getstart.pdf |binary
spatstat-1.28-2/spatstat/inst/doc/shapefiles.pdf |binary
spatstat-1.28-2/spatstat/man/Gcross.Rd | 9
spatstat-1.28-2/spatstat/man/Gdot.Rd | 5
spatstat-1.28-2/spatstat/man/Kcross.Rd | 9
spatstat-1.28-2/spatstat/man/MultiHard.Rd | 12
spatstat-1.28-2/spatstat/man/MultiStrauss.Rd | 11
spatstat-1.28-2/spatstat/man/MultiStraussHard.Rd | 9
spatstat-1.28-2/spatstat/man/Poisson.Rd | 5
spatstat-1.28-2/spatstat/man/Softcore.Rd | 16
spatstat-1.28-2/spatstat/man/addvar.Rd |only
spatstat-1.28-2/spatstat/man/ants.Rd | 8
spatstat-1.28-2/spatstat/man/betacells.Rd | 38 -
spatstat-1.28-2/spatstat/man/dclf.test.Rd |only
spatstat-1.28-2/spatstat/man/dilation.Rd | 2
spatstat-1.28-2/spatstat/man/envelope.Rd | 14
spatstat-1.28-2/spatstat/man/envelope.envelope.Rd | 4
spatstat-1.28-2/spatstat/man/envelope.lpp.Rd | 11
spatstat-1.28-2/spatstat/man/envelope.pp3.Rd | 10
spatstat-1.28-2/spatstat/man/exactMPLEstrauss.Rd | 26 +
spatstat-1.28-2/spatstat/man/fitin.Rd | 13
spatstat-1.28-2/spatstat/man/formula.fv.Rd |only
spatstat-1.28-2/spatstat/man/intensity.ppm.Rd | 9
spatstat-1.28-2/spatstat/man/is.marked.ppm.Rd | 11
spatstat-1.28-2/spatstat/man/is.multitype.ppm.Rd | 11
spatstat-1.28-2/spatstat/man/lohboot.Rd | 4
spatstat-1.28-2/spatstat/man/markcorr.Rd | 4
spatstat-1.28-2/spatstat/man/mucosa.Rd |only
spatstat-1.28-2/spatstat/man/nbfires.Rd | 9
spatstat-1.28-2/spatstat/man/parres.Rd |only
spatstat-1.28-2/spatstat/man/pcf.Rd | 12
spatstat-1.28-2/spatstat/man/pcf.fasp.Rd | 9
spatstat-1.28-2/spatstat/man/plot.fv.Rd | 7
spatstat-1.28-2/spatstat/man/plot.quad.Rd | 2
spatstat-1.28-2/spatstat/man/ppm.Rd | 17
spatstat-1.28-2/spatstat/man/ppp.object.Rd | 1
spatstat-1.28-2/spatstat/man/pppdist.Rd | 2
spatstat-1.28-2/spatstat/man/profilepl.Rd | 6
spatstat-1.28-2/spatstat/man/psst.Rd | 8
spatstat-1.28-2/spatstat/man/qqplot.ppm.Rd | 2
spatstat-1.28-2/spatstat/man/quadrat.test.Rd | 111 ++++
spatstat-1.28-2/spatstat/man/quadrat.test.splitppp.Rd | 10
spatstat-1.28-2/spatstat/man/redwoodfull.Rd | 14
spatstat-1.28-2/spatstat/man/rescale.im.Rd | 10
spatstat-1.28-2/spatstat/man/rescale.owin.Rd | 8
spatstat-1.28-2/spatstat/man/rescale.ppp.Rd | 6
spatstat-1.28-2/spatstat/man/rescale.psp.Rd | 8
spatstat-1.28-2/spatstat/man/ripras.Rd | 2
spatstat-1.28-2/spatstat/man/rmh.default.Rd | 32 +
spatstat-1.28-2/spatstat/man/rmhcontrol.Rd | 24 +
spatstat-1.28-2/spatstat/man/runifpoint.Rd | 11
spatstat-1.28-2/spatstat/man/simulate.ppm.Rd | 25 +
spatstat-1.28-2/spatstat/man/spatstat-deprecated.Rd | 4
spatstat-1.28-2/spatstat/man/spatstat-internal.Rd | 34 +
spatstat-1.28-2/spatstat/man/spatstat-package.Rd | 27 -
spatstat-1.28-2/spatstat/man/vcov.ppm.Rd | 2
spatstat-1.28-2/spatstat/src/methas.c | 9
spatstat-1.28-2/spatstat/src/methas.h | 4
spatstat-1.28-2/spatstat/src/mhloop.h | 10
spatstat-1.28-2/spatstat/tests/alltests.R | 53 ++
209 files changed, 2402 insertions(+), 1272 deletions(-)
Title: Extra Graphical Utilities Based on Lattice
Diff between latticeExtra versions 0.6-19 dated 2011-10-20 and 0.6-24 dated 2012-08-23
Description: Extra graphical utilities based on lattice
Author: Deepayan Sarkar
Maintainer: Deepayan Sarkar
DESCRIPTION | 8 +++---
MD5 | 42 +++++++++++++++----------------
NAMESPACE | 2 +
R/combineLimits.R | 37 ++++++++++++++++++++++++---
R/doubleYScale.R | 16 ++++++------
R/layer.R | 2 -
R/scale.components.R | 64 +++++++++++++++++++++++++++++++++---------------
R/segplot.R | 3 ++
R/tileplot.R | 4 +--
data/SeatacWeather.rda |binary
data/USAge.df.rda |binary
data/USAge.table.rda |binary
data/USCancerRates.rda |binary
data/ancestry.rda |binary
data/biocAccess.rda |binary
data/gvhd10.rda |binary
data/postdoc.rda |binary
inst/NEWS | 11 +++++++-
man/dendrogramGrob.Rd | 10 +++++++
man/panel.segplot.Rd | 16 ++++++++----
man/scale.components.Rd | 26 +++++++++++++++++--
man/segplot.Rd | 1
22 files changed, 173 insertions(+), 69 deletions(-)
Title: Flexible regression models for survival data.
Diff between timereg versions 1.6-7 dated 2012-07-05 and 1.6-8 dated 2012-08-23
Description: Programs for Martinussen and Scheike (2006), `Dynamic
Regression Models for Survival Data', Springer Verlag. Plus
more recent developments. Additive survival model,
semiparametric proportional odds model, cumulative residuals,
excess risk models and more. Flexible competing risks
regression including GOF-tests. Two-stage frailty modelling.
PLS for the additive risk model. Lasso in ahaz package.
Author: Thomas Scheike with contributions from Torben Martinussen and
Jeremy Silver
Maintainer: Thomas Scheike
DESCRIPTION | 11 +++++------
MD5 | 10 +++++-----
R/base.r | 5 ++---
R/new.aalen.r | 7 ++++---
R/new.cox-aalen.r | 7 ++++---
R/two-stage-reg.r | 28 ++++++++++++++--------------
6 files changed, 34 insertions(+), 34 deletions(-)
Title: Space-Time Point Pattern simulation, visualisation and analysis
Diff between stpp versions 1.0 dated 2012-08-20 and 1.0-1 dated 2012-08-23
Description: A package for analysing, simulating and displaying
space-time point patterns
Author: Edith Gabriel, Peter J Diggle, stan function by Barry
Rowlingson
Maintainer: Edith Gabriel
DESCRIPTION | 6
MD5 | 12
R/rinfec.r | 18
R/rlgcp.r | 10
R/rpp.r | 1074 ++++++++++++++++++++++++++--------------------------
man/rinfec.Rd | 2
man/stpp-package.Rd | 2
7 files changed, 571 insertions(+), 553 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-08-23 1.0.1
Title: Smoothed M-estimators for 1-dimensional location
Diff between smoothmest versions 0.1-1 dated 2010-09-15 and 0.1-2 dated 2012-08-23
Description: Some M-estimators for 1-dimensional location (Bisquare, ML
for the Cauchy distribution, and the estimators from
application of the smoothing principle introduced in Hampel,
Hennig and Ronchetti (2011) to the above, the Huber
M-estimator, and the median, main function is smoothm), and
Pitman estimator.
Author: Christian Hennig
Maintainer: Christian Hennig
DESCRIPTION | 8 ++++----
MD5 |only
NAMESPACE |only
man/smpsi.Rd | 10 +++++-----
4 files changed, 9 insertions(+), 9 deletions(-)
Title: Univariate GARCH models
Diff between rugarch versions 1.0-10 dated 2012-07-08 and 1.0-11 dated 2012-08-23
Description: ARFIMA, in-mean, external regressors and various GARCH
flavours, with methods for fit, forecast, simulation, inference
and plotting.
Author: Alexios Ghalanos
Maintainer: Alexios Ghalanos
COPYRIGHTS | 2
ChangeLog | 8
DESCRIPTION | 23
MD5 | 61 -
R/rugarch-bootstrap.R | 52
R/rugarch-csgarch.R |only
R/rugarch-graphs.R | 25
R/rugarch-helperfn.R | 10
R/rugarch-methods.R | 159 ++
R/rugarch-plots.R | 22
R/rugarch-rolling.R | 225 +--
R/rugarch-solvers.R | 19
R/rugarch-startpars.R | 149 ++
R/rugarch-tests.R | 5
cleanup |only
inst/doc/Introduction_to_the_rugarch_package.Rnw | 2
inst/doc/Introduction_to_the_rugarch_package.pdf |binary
inst/rugarch.tests/rugarch.test11.R |only
man/GMMTest.Rd | 2
man/rugarch-package.Rd | 6
man/ugarchboot-methods.Rd | 19
man/ugarchroll-methods.Rd | 9
man/ugarchspec-methods.Rd | 13
src/filters.c | 24
src/filters.h | 4
src/garchmodels.c | 44
src/garchsim.cpp | 61 -
src/garchsim.h | 1
src/rugarch.h | 6
vignettes/Introduction_to_the_rugarch_package.Rnw | 2
vignettes/Introduction_to_the_rugarch_package.tex |only
vignettes/Sweave.sty |only
vignettes/rugarch.tex | 277 ++--
vignettes/rugarchbib.bib | 1262 +++++++++++-----------
34 files changed, 1462 insertions(+), 1030 deletions(-)
Title: Functions for clustering of presence-absence, abundance and
multilocus genetic data
Diff between prabclus versions 2.2-2 dated 2010-09-16 and 2.2-3 dated 2012-08-23
Description: Distance-based parametric bootstrap tests for clustering
with spatial neighborhood information. Some distance measures,
Clustering of presence-absence, abundance and multilocus
genetical data for species delimitation, nearest neighbor based
noise detection. Try package?prabclus for on overview.
Author: Christian Hennig
Maintainer: Christian Hennig
prabclus-2.2-2/prabclus/data/Franck04koord.dat |only
prabclus-2.2-2/prabclus/data/Heterotrigona_indoFO.dat |only
prabclus-2.2-2/prabclus/data/LeiMik1.dat |only
prabclus-2.2-2/prabclus/data/LeiMik1G.dat |only
prabclus-2.2-2/prabclus/data/LeiMik1NB.dat |only
prabclus-2.2-2/prabclus/data/MartinezKoord.dat |only
prabclus-2.2-2/prabclus/data/MartinezOrtega04AFLP.dat |only
prabclus-2.2-2/prabclus/data/Waterdist.dat |only
prabclus-2.2-2/prabclus/data/kykladspecreg.R |only
prabclus-2.2-2/prabclus/data/kykladspecreg.dat |only
prabclus-2.2-2/prabclus/data/nb.R |only
prabclus-2.2-2/prabclus/data/nb.dat |only
prabclus-2.2-2/prabclus/data/siskiyou.R |only
prabclus-2.2-2/prabclus/data/tetragonula.R |only
prabclus-2.2-2/prabclus/data/veronica.R |only
prabclus-2.2-2/prabclus/data/waterdist.R |only
prabclus-2.2-3/prabclus/DESCRIPTION | 14 +++++---------
prabclus-2.2-3/prabclus/MD5 |only
prabclus-2.2-3/prabclus/NAMESPACE |only
prabclus-2.2-3/prabclus/R/newprabmatrix.R |only
prabclus-2.2-3/prabclus/data/kykladspecreg.rda |only
prabclus-2.2-3/prabclus/data/kykladspecreg.txt.gz |only
prabclus-2.2-3/prabclus/data/nb.rda |only
prabclus-2.2-3/prabclus/data/siskiyou.rda |only
prabclus-2.2-3/prabclus/data/tetragonula.rda |only
prabclus-2.2-3/prabclus/data/veronica.rda |only
prabclus-2.2-3/prabclus/data/waterdist.rda |only
prabclus-2.2-3/prabclus/data/waterdist.txt.gz |only
prabclus-2.2-3/prabclus/inst |only
prabclus-2.2-3/prabclus/man/NNclean.Rd | 4 ++--
prabclus-2.2-3/prabclus/man/crmatrix.Rd |only
prabclus-2.2-3/prabclus/man/prabclus-package.Rd | 4 +---
prabclus-2.2-3/prabclus/man/prabclust.Rd | 6 ++----
prabclus-2.2-3/prabclus/man/prabinit.Rd | 4 +---
34 files changed, 11 insertions(+), 21 deletions(-)
Title: Multidimensional Item Response Theory
Diff between mirt versions 0.2.6 dated 2012-07-15 and 0.3.0 dated 2012-08-23
Description: Analysis of dichotomous and polytomous response data using
latent trait models under the Item Response Theory paradigm.
Includes univariate and multivariate one-, two-, three-, and
four-parameter logistic models, graded response models,
generalized partial credit models, nominal models, multiple
choice models, and multivariate partially-compensatory models.
These can be used in an exploratory or confirmatory manner with
optional user defined linear constraints. Exploratory models
can be estimated via quadrature or stochastic methods, a
generalized confirmatory bi-factor analysis is included, and
confirmatory models can be fit with a Metropolis-Hastings
Robbins-Monro algorithm which can include polynomial or product
constructed latent traits.
Author: Phil Chalmers
Maintainer: Phil Chalmers
mirt-0.2.6/mirt/R/logLik.R |only
mirt-0.2.6/mirt/R/misc.R |only
mirt-0.2.6/mirt/R/read.mirt.R |only
mirt-0.2.6/mirt/man/logLik-methods.Rd |only
mirt-0.2.6/mirt/man/polymirtClass-class.Rd |only
mirt-0.2.6/mirt/man/read.mirt.Rd |only
mirt-0.2.6/mirt/src/drawThetas.cpp |only
mirt-0.2.6/mirt/src/loglik.cpp |only
mirt-0.3.0/mirt/DESCRIPTION | 39 -
mirt-0.3.0/mirt/MD5 | 82 +-
mirt-0.3.0/mirt/NAMESPACE | 4
mirt-0.3.0/mirt/NEWS | 69 ++
mirt-0.3.0/mirt/R/00-classes.R |only
mirt-0.3.0/mirt/R/01-itemtypes.R |only
mirt-0.3.0/mirt/R/02-item_methods.R |only
mirt-0.3.0/mirt/R/EMstep.R |only
mirt-0.3.0/mirt/R/LoadPars.R |only
mirt-0.3.0/mirt/R/MHRM.R |only
mirt-0.3.0/mirt/R/bfactor-methods.R |only
mirt-0.3.0/mirt/R/bfactor.R | 581 ++++++-----------
mirt-0.3.0/mirt/R/calcLogLik.R |only
mirt-0.3.0/mirt/R/confmirt-methods.R |only
mirt-0.3.0/mirt/R/confmirt.R | 983 +++++------------------------
mirt-0.3.0/mirt/R/confmirt.model.R | 52 -
mirt-0.3.0/mirt/R/fscores.R | 347 +++-------
mirt-0.3.0/mirt/R/itemplot.R | 107 +--
mirt-0.3.0/mirt/R/mirt-methods.R |only
mirt-0.3.0/mirt/R/mirt-package.R | 5
mirt-0.3.0/mirt/R/mirt.R | 795 ++++++-----------------
mirt-0.3.0/mirt/R/polymirt.R | 547 ----------------
mirt-0.3.0/mirt/R/simdata.R | 122 +--
mirt-0.3.0/mirt/R/utils.R |only
mirt-0.3.0/mirt/README.md | 21
mirt-0.3.0/mirt/ToDo | 8
mirt-0.3.0/mirt/inst/tests |only
mirt-0.3.0/mirt/man/bfactor.Rd | 560 ++++++++--------
mirt-0.3.0/mirt/man/bfactorClass-class.Rd | 12
mirt-0.3.0/mirt/man/calcLogLik-methods.Rd |only
mirt-0.3.0/mirt/man/confmirt.Rd | 637 ++++++++++--------
mirt-0.3.0/mirt/man/confmirt.model.Rd | 160 +---
mirt-0.3.0/mirt/man/confmirtClass-class.Rd | 25
mirt-0.3.0/mirt/man/fscores-methods.Rd | 21
mirt-0.3.0/mirt/man/itemplot-methods.Rd | 30
mirt-0.3.0/mirt/man/mirt-package.Rd | 48 -
mirt-0.3.0/mirt/man/mirt.Rd | 178 +++--
mirt-0.3.0/mirt/man/mirtClass-class.Rd | 10
mirt-0.3.0/mirt/man/polymirt.Rd | 224 ------
mirt-0.3.0/mirt/man/simdata.Rd | 343 ++++------
mirt-0.3.0/mirt/src/Misc.h | 2
mirt-0.3.0/mirt/src/dichOuter.cpp | 1
50 files changed, 2066 insertions(+), 3947 deletions(-)
Title: Kolmogorov-Zurbenko Adaptive Filters
Diff between kza versions 2.01 dated 2011-09-07 and 2.03 dated 2012-08-23
Description: Time Series Analysis including break detection, spectral
analysis, KZ Fourier Transforms.
Author: Brian Close
Maintainer: Brian Close
DESCRIPTION | 8 +-
MD5 | 43 +++++++--------
NAMESPACE | 4 -
R/decompose.R | 44 ++++++---------
R/kza.R | 10 +--
R/kzft.R | 87 +++++++++++++++++++++++++-----
README | 28 ++-------
cleanup | 8 +-
configure.ac | 86 +++++++++++++++---------------
data/fars.rda |binary
man/kz.Rd | 46 +++++++---------
man/kz_decompose.Rd | 3 -
man/kzft.Rd | 12 +++-
man/kzp.Rd | 7 +-
src/Makevars.win | 9 +--
src/kz.c | 48 +++++++++-------
src/kz_ma.c | 147 +++++++++++++++++++++++++++++++++++++++++++++++++++-
src/kza.c | 88 ++++++++++++++++---------------
test/ckzft.R | 14 +++-
test/kz.R |only
test/kzft.R | 32 ++++++++---
test/kzm.R | 23 +++++++-
test/kzp.R | 14 ++--
23 files changed, 502 insertions(+), 259 deletions(-)
Title: Difference measures for multivariate Gaussian probability
density functions
Diff between gaussDiff versions 1.0 dated 2010-07-30 and 1.1 dated 2012-08-23
Description: A collection difference measures for multivariate Gaussian
probability density functions, such as the Euclidea mean, the
Mahalanobis distance, the Kullback-Leibler divergence, the
J-Coefficient, the Minkowski L2-distance, the Chi-square
divergence and the Hellinger Coefficient.
Author: Henning Rust
Maintainer: Henning Rust
DESCRIPTION | 18 ++++++++----------
MD5 |only
NAMESPACE |only
R/gaussDiff.R | 6 +++---
man/normdiv.Rd | 10 +++++-----
5 files changed, 16 insertions(+), 18 deletions(-)
Title: Rmetrics - Markets and Basic Statistics
Diff between fBasics versions 2160.81 dated 2012-03-20 and 2160.83 dated 2012-08-23
Description: Environment for teaching "Financial Engineering and
Computational Finance" NOTE: SEVERAL PARTS ARE STILL
PRELIMINARY AND MAY BE CHANGED IN THE FUTURE. THIS TYPICALLY
INCLUDES FUNCTION AND ARGUMENT NAMES, AS WELL AS DEFAULTS FOR
ARGUMENTS AND RETURN VALUES. Please donate, www.rmetrics.org,
to support future activities of the Rmetrics association.
Author: Diethelm Wuertz and Rmetrics core team members, uses code
builtin from the following R contributed packages: gmm from
Pierre Chauss, gld from Robert King, gss from Chong Gu, nortest
from Juergen Gross, HyperbolicDist from David Scott, sandwich
from Thomas Lumley and Achim Zeileis, fortran/C code from
Kersti Aas and akima (0.5-1: R code under GPL) from Albrecht
Gebhardt
Maintainer: Yohan Chalabi
ChangeLog | 53 +++
DESCRIPTION | 20 -
MD5 | 16 -
NAMESPACE | 5
R/stats-interpAkima.R | 293 ---------------------
R/stats-interpLinear.R | 5
R/test-normalityTest.R | 663 ++++++++++++++++++++++---------------------------
R/utils-getS4.R | 13
man/utils-getS4.Rd | 8
9 files changed, 405 insertions(+), 671 deletions(-)
Title: Ensemble BMA Forecasting
Diff between EBMAforecast versions 0.4 dated 2012-08-21 and 0.41 dated 2012-08-23
Description: Ensemble BMA for social science data
Author: Jacob M. Montgomery, Florian Hollenbach, and Michael D. Ward
Maintainer: Jacob Montgomery
DESCRIPTION | 8 +--
MD5 | 34 ++++++++--------
R/calibrateEnsemble.R | 36 +++++++++--------
R/compareModels.R | 2
R/document-data.R | 7 +--
R/fitEnsembleLogit.R | 18 +++++---
R/forecastData.R | 4 -
R/plot.R | 15 +++----
R/summary.R | 8 +--
demo/presForecast.R | 1
man/EBMAforecast.Rd | 6 --
man/calibrateEnsemble.Rd | 89 +++++++++++++++++++++-----------------------
man/calibrationSample.Rd | 2
man/compareModels.Rd | 3 -
man/plot.Rd | 39 +++++++++----------
man/presidentialForecast.Rd | 2
man/summary.Rd | 12 ++---
man/testSample.Rd | 2
18 files changed, 144 insertions(+), 144 deletions(-)