Title: Sets, Generalized Sets, Customizable Sets and Intervals
Diff between sets versions 1.0-9 dated 2012-03-29 and 1.0-10 dated 2012-08-27
Description: Data structures and basic operations for ordinary sets,
generalizations such as fuzzy sets, multisets, and fuzzy
multisets, customizable sets, and intervals.
Author: David Meyer and Kurt Hornik (with contributions by Christian
Buchta)
Maintainer: David Meyer
DESCRIPTION | 8 ++++----
MD5 | 18 +++++++++---------
R/cardinality.R | 7 ++-----
R/cartesian.R | 2 +-
R/cset.R | 2 +-
R/gset.R | 7 ++++---
R/power.R | 4 ++--
R/similarity.R | 4 ++--
inst/NEWS.Rd | 11 +++++++++++
inst/doc/sets.pdf |binary
10 files changed, 36 insertions(+), 27 deletions(-)
Title: Soil Database Interface
Diff between soilDB versions 0.6-2 dated 2012-06-22 and 0.8-1 dated 2012-08-27
Description: A collection of functions for reading data from USDA-NCSS
soil databases.
Author: D.E. Beaudette and J.M. Skovlin
Maintainer: D.E. Beaudette
DESCRIPTION | 10 ++++----
MD5 | 36 ++++++++++++++++----------------
NEWS | 14 ++++++++++++
R/SDA_query.R | 2 -
R/fetchNASIS.R | 12 ++++++++--
R/fetchPedonPC.R | 8 ++++++-
R/get_colors_from_NASIS_db.R | 2 -
R/get_colors_from_pedon_db.R | 2 -
R/get_extended_data_from_NASIS_db.R | 17 ++++++++++++---
R/get_extended_data_from_pedon_db.R | 24 ++++++++++++++++-----
R/get_hz_data_from_NASIS_db.R | 2 -
R/get_hz_data_from_pedon_db.R | 7 +++---
R/get_site_data_from_NASIS_db.R | 24 ++++++++-------------
R/get_site_data_from_pedon_db.R | 37 ++++++++++++++++-----------------
R/nasis_component_data.R | 10 ++++----
R/utils.R | 31 +++++++++++++++++++++++++--
TODO | 2 +
man/fetchPedonPC.Rd | 10 ++++----
man/get_extended_data_from_pedon_db.Rd | 1
19 files changed, 165 insertions(+), 86 deletions(-)
Title: Product Limit Estimation for event history and survival analysis
Diff between prodlim versions 1.3.1 dated 2012-02-14 and 1.3.2 dated 2012-08-27
Description: Fast and user friendly nonparametric estimation in
censored survival (event history) analysis.
Author: Thomas A. Gerds
Maintainer: Thomas A. Gerds
DESCRIPTION | 7 ++++---
Examples/testProdlim.R | 1 +
MD5 | 25 +++++++++++++------------
R/SimCompRisk.R | 25 ++++++++++++++++++++++---
R/SimSurv.R | 21 ++++++++++++++++-----
R/SmartControl.R | 1 -
R/confInt.R | 3 ++-
R/resolveLinPred.R | 2 +-
man/SimSurv.Rd | 11 +----------
man/prodlim.Rd | 1 -
test/testClusterSurv.R | 3 ++-
test/testProdlim.R | 1 +
test/testSimCompRisk.R |only
test/testSummaryProdlim.R | 1 +
14 files changed, 64 insertions(+), 38 deletions(-)
Title: Prediction Error Curves for Survival Models
Diff between pec versions 2.1.7 dated 2012-01-30 and 2.1.8 dated 2012-08-27
Description: Validation of predicted survival probabilities using
inverse weighting and resampling.
Author: Thomas A. Gerds
Maintainer: Thomas A. Gerds
DESCRIPTION | 8 ++--
MD5 | 41 +++++++++++----------
NAMESPACE | 2 +
R/CindexBootstrapCrossValidation.R | 4 +-
R/bootstrapCrossValidation.R | 25 ++++++++++---
R/calPlot.R | 18 ++++-----
R/crps.R | 7 ++-
R/ipcw.R | 40 ++++++++++++++++-----
R/kFoldCrossValidation.R | 4 +-
R/pecMethods.R | 58 +++++++++++++++++++++---------
R/predictEventProb.R | 41 ++++++++++++++-------
R/predictSurvProb.R | 70 ++++++++++++++++++++-----------------
R/print.multiSplitTest.R | 3 +
R/pseudoPecMethods.R | 8 ++--
R/testResiduals.R | 2 -
data/cost.rda |only
man/cost.Rd |only
man/ipcw.Rd | 3 +
man/pec.Rd | 33 +++++++++++++----
man/predictSurvProb.Rd | 15 +++++++
src/pec.c | 31 +++++++---------
src/pecResiduals.c | 13 +-----
test/test-CompRisk-pec.R |only
23 files changed, 273 insertions(+), 153 deletions(-)
Title: Algorithms for Quantitative Pedology
Diff between aqp versions 1.2-5 dated 2012-06-21 and 1.2-7 dated 2012-08-27
Description: A collection of algorithms related to modeling of soil
resources, soil classification, soil profile aggregation, and
visualization.
Author: Dylan Beaudette
Maintainer: Dylan Beaudette
DESCRIPTION | 10 -
MD5 | 13 -
NEWS | 7
R/panel.depth_function.R | 251 ++++++++++++++--------------
R/profile_plot.R | 348 +++++++++++++++++++--------------------
demo/00Index | 3
demo/slope_effect_hz_thickness.R |only
man/aqp-package.Rd | 4
8 files changed, 323 insertions(+), 313 deletions(-)
Title: Least-squares means
Diff between lsmeans versions 0.9 dated 2012-08-15 and 0.99 dated 2012-08-27
Description: This package provides the function 'lsmeans' for
outputting so-called least-squares means for factor
combinations in an 'lm', 'lme', or 'lmer' object. It can also
compute contrasts or linear combinations of these least-squares
means, and several standard contrast families are provided.
Author: Russell V. Lenth
Maintainer: Russ Lenth
DESCRIPTION | 14 +--
MD5 | 18 +++-
R/empty.cells.R |only
R/lsmeans.R | 190 +++++++++++++++++++++++++++++++++++++++++--------
inst/NEWS |only
inst/doc/lsmeans.Rnw |only
inst/doc/lsmeans.pdf |binary
man/empty.cells.Rd |only
man/lsmeans-package.Rd | 12 +--
man/lsmeans.Rd | 82 ++++++++++++---------
vignettes |only
11 files changed, 233 insertions(+), 83 deletions(-)
Title: Time-ordered and time-aggregated network analyses
Diff between timeordered versions 0.9.1 dated 2012-06-07 and 0.9.2 dated 2012-08-27
Description: Methods for incorporating time into network analysis.
Construction of time-ordered networks (temporal graphs).
Shortest-time and shortest-path-length analyses. Resource
spread calculations. Data resampling and rarefaction for null
model construction. Reduction to time-aggregated networks with
variable window sizes; application of common descriptive
statistics to these networks. Vector clock latencies. Plotting
functionalities & full compatibility with all network methods
in the igraph0 library.
Author: Benjamin Blonder
Maintainer: Benjamin Blonder
DESCRIPTION | 11 ++++++-----
MD5 | 10 +++++-----
R/generatetimeaggregatednetwork.R | 6 ++++--
R/plottonet.R | 2 +-
man/generatetimeaggregatednetwork.Rd | 21 ++-------------------
man/plottonet.Rd | 12 ------------
6 files changed, 18 insertions(+), 44 deletions(-)
Title: Spatial areal unit modelling
Diff between CARBayes versions 1.0 dated 2012-03-27 and 1.1 dated 2012-08-27
Description: This package implements Bayesian hierarchical spatial
areal unit models. In such models the spatial correlation is
modelled by a set of random effects, which are assigned a
conditional autoregressive (CAR) prior distribution. Examples
of the models included are the BYM model as well as recently
developed localised spatial smoothing models. In addition,
Moran's I and Geary's C permutation tests for spatial
correlation can be implemented.
Author: Duncan Lee
Maintainer: Duncan Lee
CARBayes-1.0/CARBayes/R/binomial.localisedbinaryCAR.R |only
CARBayes-1.0/CARBayes/R/binomial.localisedcontinuousCAR.R |only
CARBayes-1.0/CARBayes/R/gaussian.localisedbinaryCAR.R |only
CARBayes-1.0/CARBayes/R/gaussian.localisedcontinuousCAR.R |only
CARBayes-1.0/CARBayes/R/poisson.localisedbinaryCAR.R |only
CARBayes-1.0/CARBayes/R/poisson.localisedcontinuousCAR.R |only
CARBayes-1.0/CARBayes/man/binomial.localisedbinaryCAR.Rd |only
CARBayes-1.0/CARBayes/man/binomial.localisedcontinuousCAR.Rd |only
CARBayes-1.0/CARBayes/man/gaussian.localisedbinaryCAR.Rd |only
CARBayes-1.0/CARBayes/man/gaussian.localisedcontinuousCAR.Rd |only
CARBayes-1.0/CARBayes/man/poisson.localisedbinaryCAR.Rd |only
CARBayes-1.0/CARBayes/man/poisson.localisedcontinuousCAR.Rd |only
CARBayes-1.1/CARBayes/DESCRIPTION | 13 -
CARBayes-1.1/CARBayes/MD5 | 78 +++++-----
CARBayes-1.1/CARBayes/NAMESPACE | 19 +-
CARBayes-1.1/CARBayes/R/W.prior.elicit.R |only
CARBayes-1.1/CARBayes/R/binomial.bymCAR.R | 1
CARBayes-1.1/CARBayes/R/binomial.dissimilarityCARbinary.R |only
CARBayes-1.1/CARBayes/R/binomial.dissimilarityCARcontinuous.R |only
CARBayes-1.1/CARBayes/R/binomial.iarCAR.R | 1
CARBayes-1.1/CARBayes/R/binomial.independent.R | 1
CARBayes-1.1/CARBayes/R/binomial.lerouxCAR.R | 1
CARBayes-1.1/CARBayes/R/binomial.priorWCAR.R |only
CARBayes-1.1/CARBayes/R/binomial.properCAR.R | 1
CARBayes-1.1/CARBayes/R/gaussian.bymCAR.R | 1
CARBayes-1.1/CARBayes/R/gaussian.dissimilarityCARbinary.R |only
CARBayes-1.1/CARBayes/R/gaussian.dissimilarityCARcontinuous.R |only
CARBayes-1.1/CARBayes/R/gaussian.iarCAR.R | 1
CARBayes-1.1/CARBayes/R/gaussian.independent.R | 1
CARBayes-1.1/CARBayes/R/gaussian.lerouxCAR.R | 1
CARBayes-1.1/CARBayes/R/gaussian.priorWCAR.R |only
CARBayes-1.1/CARBayes/R/gaussian.properCAR.R | 1
CARBayes-1.1/CARBayes/R/geary.permutation.R |only
CARBayes-1.1/CARBayes/R/moran.permutation.R | 1
CARBayes-1.1/CARBayes/R/poisson.bymCAR.R | 1
CARBayes-1.1/CARBayes/R/poisson.dissimilarityCARbinary.R |only
CARBayes-1.1/CARBayes/R/poisson.dissimilarityCARcontinuous.R |only
CARBayes-1.1/CARBayes/R/poisson.iarCAR.R | 1
CARBayes-1.1/CARBayes/R/poisson.independent.R | 1
CARBayes-1.1/CARBayes/R/poisson.lerouxCAR.R | 1
CARBayes-1.1/CARBayes/R/poisson.priorWCAR.R |only
CARBayes-1.1/CARBayes/R/poisson.properCAR.R | 1
CARBayes-1.1/CARBayes/inst/doc/CARBayes-Vignette.pdf |binary
CARBayes-1.1/CARBayes/man/CARBayes-package.Rd | 40 +++--
CARBayes-1.1/CARBayes/man/W.prior.elicit.Rd |only
CARBayes-1.1/CARBayes/man/binomial.bymCAR.Rd | 9 -
CARBayes-1.1/CARBayes/man/binomial.dissimilarityCARbinary.Rd |only
CARBayes-1.1/CARBayes/man/binomial.dissimilarityCARcontinuous.Rd |only
CARBayes-1.1/CARBayes/man/binomial.priorWCAR.Rd |only
CARBayes-1.1/CARBayes/man/gaussian.dissimilarityCARbinary.Rd |only
CARBayes-1.1/CARBayes/man/gaussian.dissimilarityCARcontinuous.Rd |only
CARBayes-1.1/CARBayes/man/gaussian.priorWCAR.Rd |only
CARBayes-1.1/CARBayes/man/geary.permutation.Rd |only
CARBayes-1.1/CARBayes/man/moran.permutation.Rd | 42 +++++
CARBayes-1.1/CARBayes/man/poisson.dissimilarityCARbinary.Rd |only
CARBayes-1.1/CARBayes/man/poisson.dissimilarityCARcontinuous.Rd |only
CARBayes-1.1/CARBayes/man/poisson.priorWCAR.Rd |only
57 files changed, 129 insertions(+), 88 deletions(-)
Title: Text Analysis Utilities
Diff between tau versions 0.0-13 dated 2012-04-04 and 0.0-14 dated 2012-08-27
Description: Utilities for text analysis
Author: Christian Buchta [aut], Kurt Hornik [aut, cre], Ingo Feinerer
[aut], David Meyer [aut]
Maintainer: Kurt Hornik
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
R/sysdata.rda |binary
3 files changed, 6 insertions(+), 6 deletions(-)
Title: Selected ISO codes
Diff between ISOcodes versions 2012.01.18 dated 2012-01-18 and 2012.08.27 dated 2012-08-27
Description: ISO language, territory, currency, script and character
codes. Provides ISO 639 language codes, ISO 3166 territory
codes, ISO 4217 currency codes, ISO 15924 script codes, and the
ISO 8859 character codes as well as the UN M.49 area codes.
Author: Christian Buchta and Kurt Hornik
Maintainer: Kurt Hornik
DESCRIPTION | 6 +++---
MD5 | 28 ++++++++++++++--------------
data/ISO_15924.rda |binary
data/ISO_3166_1.rda |binary
data/ISO_3166_2.rda |binary
data/ISO_3166_3.rda |binary
data/ISO_4217.rda |binary
data/ISO_4217_Historic.rda |binary
data/ISO_639_2.rda |binary
data/ISO_639_3.rda |binary
data/ISO_639_3_Retirements.rda |binary
data/ISO_639_5.rda |binary
data/ISO_8859.rda |binary
data/UN_M.49_Countries.rda |binary
data/UN_M.49_Regions.rda |binary
15 files changed, 17 insertions(+), 17 deletions(-)