Sun, 30 Sep 2012

Package gnm updated to version 1.0-5 with previous version 1.0-4 dated 2012-09-07

Title: Generalized Nonlinear Models
Description: Functions to specify and fit generalized nonlinear models, including models with multiplicative interaction terms such as the UNIDIFF model from sociology and the AMMI model from crop science, and many others. Over-parameterized representations of models are used throughout; functions are provided for inference on estimable parameter combinations, as well as standard methods for diagnostics etc.
Author: Heather Turner and David Firth
Maintainer: Heather Turner

Diff between gnm versions 1.0-4 dated 2012-09-07 and 1.0-5 dated 2012-09-30

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 inst/NEWS                 |   23 +
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 inst/doc/gnmOverview.pdf  |binary
 man/gnm.Rd                |    2 
 tests/RChomog.Rout.save   |    6 
 tests/gammi.Rout.save     |    8 
 tests/unidiff.Rout.save   |   14 -
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 12 files changed, 376 insertions(+), 360 deletions(-)

More information about gnm at CRAN
Permanent link

Package XML updated to version 3.95-0 with previous version 3.9-4 dated 2012-01-31

Title: Tools for parsing and generating XML within R and S-Plus.
Description: This package provides many approaches for both reading and creating XML (and HTML) documents (including DTDs), both local and accessible via HTTP or FTP. It also offers access to an XPath "interpreter".
Author: Duncan Temple Lang
Maintainer: Duncan Temple Lang

Diff between XML versions 3.9-4 dated 2012-01-31 and 3.95-0 dated 2012-09-30

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 139 files changed, 1356 insertions(+), 331 deletions(-)

More information about XML at CRAN
Permanent link

Package RCurl updated to version 1.95-0 with previous version 1.91-1 dated 2012-02-08

Title: General network (HTTP/FTP/...) client interface for R
Description: The package allows one to compose general HTTP requests and provides convenient functions to fetch URIs, get & post forms, etc. and process the results returned by the Web server. This provides a great deal of control over the HTTP/FTP/... connection and the form of the request while providing a higher-level interface than is available just using R socket connections. Additionally, the underlying implementation is robust and extensive, supporting FTP/FTPS/TFTP (uploads and downloads), SSL/HTTPS, telnet, dict, ldap, and also supports cookies, redirects, authentication, etc.
Author: Duncan Temple Lang
Maintainer: Duncan Temple Lang

Diff between RCurl versions 1.91-1 dated 2012-02-08 and 1.95-0 dated 2012-09-30

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 67 files changed, 5363 insertions(+), 4980 deletions(-)

More information about RCurl at CRAN
Permanent link

Package sp updated to version 1.0-0 with previous version 0.9-99 dated 2012-05-02

Title: classes and methods for spatial data
Description: A package that provides classes and methods for spatial data. The classes document where the spatial location information resides, for 2D or 3D data. Utility functions are provided, e.g. for plotting data as maps, spatial selection, as well as methods for retrieving coordinates, for subsetting, print, summary, etc.
Author: Edzer Pebesma [aut, cre], Roger Bivand [aut]
Maintainer: Edzer Pebesma

Diff between sp versions 0.9-99 dated 2012-05-02 and 1.0-0 dated 2012-09-30

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 25 files changed, 3762 insertions(+), 2284 deletions(-)

More information about sp at CRAN
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Package HFWutils (with last version 0.9.5.2011.03.21) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-03-21 0.9.5.2011.03.21
2010-08-20 0.9.4.2010.08.20
2009-12-09 0.9.3.2009.12.07
2008-07-06 0.9.1.2008.05.28
2008-05-19 0.9.2008.05.17
2007-09-21 0.8.2007.09.16
2007-09-13 0.8.2007.09.02
2007-09-02 0.7.2007.09.02

Permanent link
Package SQLiteMap (with last version 0.6.2) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-02-06 0.6.2
2011-04-24 0.6.1
2011-04-05 0.5
2008-07-29 0.3

Permanent link
Package epitools updated to version 0.5-7 with previous version 0.5-6 dated 2010-07-09

Title: Epidemiology Tools
Description: EpiTools: R Package for Epidemiologic Data and Graphics
Author: Tomas J. Aragon Developer [aut, cre], Michael P. Fay User [ctb], Daniel Wollschlaeger User [ctb]
Maintainer: Tomas J. Aragon Developer

Diff between epitools versions 0.5-6 dated 2010-07-09 and 0.5-7 dated 2012-09-30

 DESCRIPTION               |   20 +++++++++++++-------
 MD5                       |only
 R/colorbrewer.display.R   |    8 ++++----
 R/colorbrewer.pallette.R  |    2 +-
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 R/expand.table.R          |   25 ++++++++++++++++---------
 R/or.midp.R               |    7 ++++---
 R/ormidp.test.R           |    4 ++--
 R/table.margins.R         |    4 ++--
 man/ageadjust.direct.Rd   |    2 +-
 man/ageadjust.indirect.Rd |   24 +++++++++++-------------
 man/as.hour.Rd            |    2 +-
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 man/rateratio.Rd          |    2 +-
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Package RJSONIO updated to version 1.0-0 with previous version 0.98-1 dated 2012-02-06

Title: Serialize R objects to JSON, JavaScript Object Notation
Description: This is a package that allows conversion to and from data in Javascript object notation (JSON) format. This allows R objects to be inserted into Javascript/ECMAScript/ActionScript code and allows R programmers to read and convert JSON content to R objects. This is an alternative to rjson package. That version was too slow for converting large R objects to JSON and is not extensible, but a very useful prototype. It is fast for parsing. This package uses methods, vectorized operations and C code and callbacks to R functions for deserializing JSON objects to R. Verison 0.4 of this package uses a new native parser, implements the transformation code in C and allocates memory efficiently (rather than concatenating because of event driven parsing). The result is a significantly faster parsing of large JSON documents.
Author: Duncan Temple Lang
Maintainer: Duncan Temple Lang

Diff between RJSONIO versions 0.98-1 dated 2012-02-06 and 1.0-0 dated 2012-09-30

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 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONAllocator.h      |    2 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONChildren.cpp     |    6 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONChildren.h       |   60 -
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONDebug.cpp        |    5 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONDebug.h          |    2 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONDefs.h           |   32 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONGlobals.h        |    4 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONMemory.cpp       |    4 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONMemory.h         |   32 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONMemoryPool.h     |    4 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONNode.h           |   33 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONNode_Mutex.cpp   |    8 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONPreparse.cpp     |   22 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONSharedString.h   |only
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONStream.cpp       |   96 +-
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONStream.h         |    8 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONValidator.cpp    |   16 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONWorker.cpp       |  446 ++++------
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONWorker.h         |   31 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSONWriter.cpp       |  198 ++--
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/JSON_Base64.h        |   26 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/NumberToString.h     |  270 ++++--
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/internalJSONNode.cpp |   12 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/internalJSONNode.h   |   18 
 RJSONIO-1.0-0/RJSONIO/src/libjson/Source/libjson.cpp          |   18 
 RJSONIO-1.0-0/RJSONIO/src/libjson/copy                        |only
 RJSONIO-1.0-0/RJSONIO/src/libjson/libjson.h                   |   17 
 RJSONIO-1.0-0/RJSONIO/src/libjson/makefile                    |    8 
 RJSONIO-1.0-0/RJSONIO/src/rlibjson.c                          |  175 +++
 RJSONIO-1.0-0/RJSONIO/src/rparser.c                           |only
 RJSONIO-1.0-0/RJSONIO/stream.R                                |only
 RJSONIO-1.0-0/RJSONIO/streaming.R                             |only
 RJSONIO-1.0-0/RJSONIO/tests/flat.json                         |only
 RJSONIO-1.0-0/RJSONIO/tests/nested.json                       |only
 RJSONIO-1.0-0/RJSONIO/tests/s4.R                              |only
 RJSONIO-1.0-0/RJSONIO/tests/scalarCollapse.R                  |only
 RJSONIO-1.0-0/RJSONIO/tests/serialize.R                       |    1 
 RJSONIO-1.0-0/RJSONIO/tests/stringFun.R                       |only
 RJSONIO-1.0-0/RJSONIO/tests/toJSON.R                          |    6 
 60 files changed, 1284 insertions(+), 697 deletions(-)

More information about RJSONIO at CRAN
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Package networksis (with last version 1.4) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2010-06-16 1.4
2008-04-16 1.0

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Package growcurves updated to version 0.2.1 with previous version 0.2 dated 2012-08-10

Title: Bayesian semi and nonparametric growth curve models that additionally include multiple membership random effects.
Description: Employs a non-parametric formulation for by-subject random effect parameters to borrow strength over a constrained number of repeated measurement waves in a fashion that permits multiple effects per subject. One class of models employs a Dirichlet process (DP) prior for the subject random effects and includes an additional set of random effects that utilize a different grouping factor and are mapped back to clients through a multiple membership weight matrix; e.g. treatment(s) exposure or dosage. A second class of models employs a dependent DP (DDP) prior for the subject random effects that directly incorporates the multiple membership pattern.
Author: Terrance Savitsky
Maintainer: "Savitsky, Terrance"

Diff between growcurves versions 0.2 dated 2012-08-10 and 0.2.1 dated 2012-09-30

 DESCRIPTION               |   12 +++++------
 MD5                       |   28 ++++++++++++-------------
 NAMESPACE                 |   50 +++++++++++++++++++++++-----------------------
 NEWS                      |    4 ++-
 R/datbrghtmodterms.R      |    6 ++---
 R/ddpMCMCplots.R          |   22 ++++++++++----------
 R/ddpeffectsplot.R        |   12 +++++------
 R/dpgrowmm.R              |    6 ++---
 R/growplot.R              |    4 +--
 R/help.R                  |    6 ++---
 R/mcmcPlots.R             |   30 +++++++++++++--------------
 R/trtplot.R               |    1 
 man/datbrghtmodterms.Rd   |   10 ++++-----
 man/dpgrowmm.Rd           |    2 -
 man/growcurves-package.Rd |    8 ++++---
 15 files changed, 102 insertions(+), 99 deletions(-)

More information about growcurves at CRAN
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New package ChangeAnomalyDetection with initial version 0.0.4
Package: ChangeAnomalyDetection
Type: Package
Title: Change Anomaly Detection
Version: 0.0.4
Date: 2012-09-29
Author: Yohei Sato
Maintainer: Yohei Sato
Description: It is a R package for the detection of the point of a sharp turn of the behavior of the time series.
License: BSD
Depends: TTR
Packaged: 2012-09-30 01:22:24 UTC; sato.yohei
Repository: CRAN
Date/Publication: 2012-09-30 06:29:38

More information about ChangeAnomalyDetection at CRAN
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