Sat, 13 Oct 2012

Package PwrGSD updated to version 1.171 with previous version 1.16.1 dated 2012-10-12

Title: Power in a Group Sequential Design
Description: Tools the evaluation of interim analysis plans for sequentially monitored trials on a survival endpoint; tools to construct efficacy and futility boundaries, for deriving power of a sequential design at a specified alternative, template for evaluating the performance of candidate plans at a set of time varying alternatives.
Author: Grant Izmirlian
Maintainer: Grant Izmirlian

Diff between PwrGSD versions 1.16.1 dated 2012-10-12 and 1.171 dated 2012-10-13

 PwrGSD-1.16.1/PwrGSD/inst/doc/GrpSeqBnds-vignette-1-incl-ex1-plot.eps |only
 PwrGSD-1.16.1/PwrGSD/inst/doc/GrpSeqBnds-vignette-1-incl-ex1-plot.pdf |only
 PwrGSD-1.16.1/PwrGSD/src/Dnsties.c                                    |only
 PwrGSD-1.16.1/PwrGSD/src/MySurvFit.c                                  |only
 PwrGSD-1.16.1/PwrGSD/src/cmptdnsty.c                                  |only
 PwrGSD-1.171/PwrGSD/DESCRIPTION                                       |    9 
 PwrGSD-1.171/PwrGSD/MD5                                               |   33 
 PwrGSD-1.171/PwrGSD/NAMESPACE                                         |    9 
 PwrGSD-1.171/PwrGSD/R/PwrGSD.R                                        |  356 +++++++---
 PwrGSD-1.171/PwrGSD/R/mysurvfit.R                                     |only
 PwrGSD-1.171/PwrGSD/inst/doc/GrpSeqBnds-vignette-1.pdf                |binary
 PwrGSD-1.171/PwrGSD/inst/doc/PwrGSD-manual.pdf                        |only
 PwrGSD-1.171/PwrGSD/inst/doc/PwrGSD-vignette-1.pdf                    |binary
 PwrGSD-1.171/PwrGSD/inst/doc/cpd-PwrGSD-vignette-1.pdf                |binary
 PwrGSD-1.171/PwrGSD/man/ChA9-agghaz.Rd                                |    4 
 PwrGSD-1.171/PwrGSD/man/ChC3-Dnsty.Rd                                 |only
 PwrGSD-1.171/PwrGSD/man/ChC4-SCtoBdry.Rd                              |only
 PwrGSD-1.171/PwrGSD/src/Dnsty.c                                       |only
 PwrGSD-1.171/PwrGSD/src/WtdLogRank.c                                  |    6 
 PwrGSD-1.171/PwrGSD/src/cpblocked.c                                   |   18 
 PwrGSD-1.171/PwrGSD/src/grpseqbnds.c                                  |    4 
 PwrGSD-1.171/PwrGSD/src/intsurvdiff.c                                 |   10 
 PwrGSD-1.171/PwrGSD/src/mysurvfit.c                                   |only
 23 files changed, 333 insertions(+), 116 deletions(-)

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New package Laterality with initial version 0.9
Package: Laterality
Type: Package
Title: Laterality
Version: 0.9
Date: 2012-10-13
Author: Borel A., Pouydebat E., Reghem E.
Maintainer:
Description: Laterality package calculates Handedness index (HI) and z-score. It gives also absolute HI and mean HI at the individual and group level. The corresponding graphs can also be plotted. Some functions based on the ade4 package perform correspondence analysis (package ade4 is needed).
License: GPL (>= 2.0)
LazyLoad: yes
Depends: ade4
Packaged: 2012-10-13 12:48:48 UTC; antony
Repository: CRAN
Date/Publication: 2012-10-13 16:09:23

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New package blme with initial version 0.01-6
Package: blme
Version: 0.01-6
Date: 2012-10-14
Title: Bayesian Linear Mixed-Effects models
Author: Vincent Dorie
Maintainer: Vincent Dorie
Description: Maximum a posteriori estimation for linear and generalized linear mixed-effects models in a Bayesian setting. Extends lme4 by Douglas Bates and Martin Maechler.
Depends: methods, R(>= 2.9.2), Matrix(>= 0.999375-11), lme4(>= 0.999375-37)
LinkingTo: Matrix, stats
Imports: lme4, Matrix
Suggests: RUnit
LazyLoad: yes
LazyData: yes
License: GPL (>= 2)
Packaged: 2012-10-13 15:44:29 UTC; vdorie
Repository: CRAN
Date/Publication: 2012-10-13 16:11:02

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New package opmdata with initial version 0.1-0
Package: opmdata
Version: 0.1-0
Date: 2012-10-13
Title: Example data for analysing OmniLog(R) Phenotype Microarray data
Author: Markus Goeker, with contributions by Lea A.I. Vaas and Johannes Sikorski
Maintainer: Markus Goeker
Depends: R (>= 2.10), opm
Enhances: opm
Description: The package `opm' provides tools for analysing OmniLog(R) Phenotype Microarray (PM) data as produced by the device distributed by BiOLOG Inc. The package `opmdata' contains the entire example dataset from Vaas et al. (2012), which has been removed from `opm' due to its size.
License: GPL (>= 2)
URL: http://www.dsmz.de/research/microorganisms/projects/analysis-of-omnilog-phenotype-microarray-data.html
Collate: 'data.R'
LazyData: yes
LazyDataCompression: bzip2
Packaged: 2012-10-13 13:08:20 UTC; goeker
Repository: CRAN
Date/Publication: 2012-10-13 15:01:56

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New package pbdSLAP with initial version 0.1-0
Package: pbdSLAP
Version: 0.1-0
Date: 2012-10-08
Title: Programming with Big Data -- Scalable Linear Algebra Packages
Authors@R: c(person("Wei-Chen", "Chen", role = c("aut", "cre"), email = "wccsnow@gmail.com"), person("Drew", "Schmidt", role = "aut"), person("George", "Ostrouchov", role = "aut"), person("Pragneshkumar", "Patel", role = "aut"), person("ScaLAPACK", role = "ctb"))
Depends: R (>= 2.13.0), methods, rlecuyer, pbdMPI (>= 0.1-1)
LazyLoad: yes
LazyData: yes
Description: pbdSLAP utilizes scalable linear algebra packages mainly including BLACS, PBLAS, and ScaLAPACK in double precision via pbdMPI based on ScaLAPACK version 2.0.2.
SystemRequirements: OpenMPI (>= 1.5.4) on Solaris, Linux and Mac, MPICH2 (>= 1.4.1p1) on Windows
License: BSD
URL: http://r-pbd.org/
Packaged: 2012-10-12 23:50:58 UTC; snoweye
Author: Wei-Chen Chen [aut, cre], Drew Schmidt [aut], George Ostrouchov [aut], Pragneshkumar Patel [aut], ScaLAPACK [ctb]
Maintainer: Wei-Chen Chen
Repository: CRAN
Date/Publication: 2012-10-13 12:10:04

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New package REPPlab with initial version 0.1
Package: REPPlab
Type: Package
Title: R interface to EPP-lab, a Java program for exploratory projection pursuit.
Version: 0.1
Date: 2012-10-08
Author: Daniel Fischer, Alain Berro, Klaus Nordhausen, Anne Ruiz-Gazen
Maintainer: Daniel Fischer
Depends: R (>= 2.15.1), rJava, lattice
Suggests: tourr, amap
Description: An R Interface to EPP-Lab (Version 0.1). EPP-Lab is a Java programm for projection pursuit using genetic algorithms written by Alain Berro.
License: GPL (>= 2)
Encoding: latin1
Packaged: 2012-10-13 06:53:45 UTC; medafi
Repository: CRAN
Date/Publication: 2012-10-13 09:04:34

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Package queueing updated to version 0.1.5 with previous version 0.1.4 dated 2011-11-24

Title: Basic Markovian queueing models
Description: Basic Markovian queueing systems.
Author: Pedro Canadilla
Maintainer: Pedro Canadilla

Diff between queueing versions 0.1.4 dated 2011-11-24 and 0.1.5 dated 2012-10-13

 ChangeLog                   |   29 +
 DESCRIPTION                 |    8 
 MD5                         |  143 ++++-----
 NAMESPACE                   |    1 
 R/queueing.R                |  667 ++++++++++++++++++++++++++------------------
 man/C_erlang.Rd             |    6 
 man/CheckInput.i_MCCN.Rd    |    4 
 man/CheckInput.i_MCON.Rd    |    4 
 man/Engset.Rd               |only
 man/Inputs.o_MCCN.Rd        |    4 
 man/Inputs.o_MCON.Rd        |    4 
 man/L.o_MCCN.Rd             |    4 
 man/L.o_MCON.Rd             |    4 
 man/Lc.Rd                   |    4 
 man/Lc.o_MCCN.Rd            |    4 
 man/Lc.o_MCON.Rd            |    4 
 man/Lck.Rd                  |    4 
 man/Lck.o_MCCN.Rd           |    4 
 man/Lck.o_MCON.Rd           |    4 
 man/Lk.Rd                   |    4 
 man/Lk.o_MCCN.Rd            |    4 
 man/Lk.o_MCON.Rd            |    4 
 man/NewInput.CJN.Rd         |    8 
 man/NewInput.MCCN.Rd        |   16 -
 man/NewInput.MCON.Rd        |   14 
 man/NewInput.MM1.Rd         |    2 
 man/NewInput.MM1K.Rd        |    2 
 man/NewInput.MM1KK.Rd       |    2 
 man/NewInput.MMC.Rd         |    2 
 man/NewInput.MMCC.Rd        |    2 
 man/NewInput.MMCK.Rd        |    2 
 man/NewInput.MMCKK.Rd       |    2 
 man/NewInput.MMCKM.Rd       |    2 
 man/NewInput.MMInf.Rd       |    2 
 man/NewInput.MMInfKK.Rd     |    2 
 man/NewInput.OJN.Rd         |    8 
 man/QueueingModel.i_CJN.Rd  |    6 
 man/QueueingModel.i_MCCN.Rd |   10 
 man/QueueingModel.i_MCON.Rd |   10 
 man/QueueingModel.i_OJN.Rd  |    6 
 man/ROck.Rd                 |    4 
 man/ROck.o_MCCN.Rd          |    4 
 man/ROck.o_MCON.Rd          |    4 
 man/ROk.Rd                  |    4 
 man/ROk.o_MCCN.Rd           |    4 
 man/ROk.o_MCON.Rd           |    4 
 man/Throughput.o_MCCN.Rd    |    4 
 man/Throughput.o_MCON.Rd    |    4 
 man/Throughputc.Rd          |    4 
 man/Throughputc.o_MCCN.Rd   |    4 
 man/Throughputc.o_MCON.Rd   |    4 
 man/Throughputck.Rd         |    4 
 man/Throughputck.o_MCCN.Rd  |    4 
 man/Throughputck.o_MCON.Rd  |    4 
 man/Throughputcn.Rd         |    4 
 man/Throughputcn.o_MCCN.Rd  |    4 
 man/Throughputk.Rd          |    4 
 man/Throughputk.o_MCCN.Rd   |    4 
 man/Throughputk.o_MCON.Rd   |    4 
 man/W.Rd                    |    6 
 man/W.o_MCCN.Rd             |    4 
 man/W.o_MCON.Rd             |    4 
 man/Wc.Rd                   |    4 
 man/Wc.o_MCCN.Rd            |    4 
 man/Wc.o_MCON.Rd            |    4 
 man/Wck.Rd                  |    4 
 man/Wck.o_MCCN.Rd           |    4 
 man/Wck.o_MCON.Rd           |    4 
 man/Wk.Rd                   |    4 
 man/Wk.o_MCCN.Rd            |    4 
 man/Wk.o_MCON.Rd            |    4 
 man/summary.o_MCCN.Rd       |    4 
 man/summary.o_MCON.Rd       |    4 
 73 files changed, 649 insertions(+), 497 deletions(-)

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Package colorout (with last version 0.9-9) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-12-08 0.9-9
2011-11-23 0.9-4
2011-11-22 0.9-3
2011-11-20 0.9-0

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Package vimcom (with last version 0.9-2) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-05-02 0.9-2
2012-02-16 0.9-0

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