More information about SphericalCubature at CRAN
Permanent link
Title: Analysis of Multivariate Event Times
Diff between mets versions 0.2.1 dated 2013-04-24 and 0.2.2 dated 2013-05-21
Description: Implementation of various statistical models for
multivariate event history data. Including multivariate
cumulative incidence models, and bivariate random effects
probit models (Liability models)
Author: Klaus K. Holst and Thomas Scheike
Maintainer: Klaus K. Holst
mets-0.2.1/mets/inst/misc/workshop-ts.R |only
mets-0.2.1/mets/inst/misc/workshop.R |only
mets-0.2.1/mets/inst/misc/workshop.org |only
mets-0.2.2/mets/DESCRIPTION | 14
mets-0.2.2/mets/MD5 | 113 +
mets-0.2.2/mets/NAMESPACE | 26
mets-0.2.2/mets/NEWS | 8
mets-0.2.2/mets/R/Dbvn.R | 10
mets-0.2.2/mets/R/aalenfrailty.R | 11
mets-0.2.2/mets/R/bicomprisk.R | 4
mets-0.2.2/mets/R/binomial.twostage.R | 79 +
mets-0.2.2/mets/R/biprobit.R | 26
mets-0.2.2/mets/R/bptwin.R | 486 ++++----
mets-0.2.2/mets/R/casewise.R | 32
mets-0.2.2/mets/R/claytonakes.R | 27
mets-0.2.2/mets/R/clusterindex-reshape.R | 4
mets-0.2.2/mets/R/cor.R | 32
mets-0.2.2/mets/R/cumh.R | 152 ++
mets-0.2.2/mets/R/fastreshape.R | 86 -
mets-0.2.2/mets/R/methodstwinlm.R | 160 +-
mets-0.2.2/mets/R/mets-packages.R | 14
mets-0.2.2/mets/R/phreg.R |only
mets-0.2.2/mets/R/prop-odds.R |only
mets-0.2.2/mets/R/summary.bptwin.R | 66 -
mets-0.2.2/mets/R/twinlm.R | 266 +---
mets-0.2.2/mets/R/twinlm2.R |only
mets-0.2.2/mets/R/twostage.R | 297 ++++
mets-0.2.2/mets/data/datalist | 1
mets-0.2.2/mets/data/mena.rda |only
mets-0.2.2/mets/inst/misc/casewisea.png |only
mets-0.2.2/mets/inst/misc/cif2.png |only
mets-0.2.2/mets/inst/misc/cifMZ.png |only
mets-0.2.2/mets/inst/misc/conc2.png |only
mets-0.2.2/mets/inst/misc/concordance.png |only
mets-0.2.2/mets/inst/misc/cumh.png |only
mets-0.2.2/mets/inst/misc/ipw.png |only
mets-0.2.2/mets/inst/misc/mena.html |only
mets-0.2.2/mets/inst/misc/obs |only
mets-0.2.2/mets/inst/misc/orgmode1.css |only
mets-0.2.2/mets/inst/misc/orgmode2.css |only
mets-0.2.2/mets/inst/misc/pcif.png |only
mets-0.2.2/mets/inst/misc/pcif2.png |only
mets-0.2.2/mets/inst/misc/pcifl.png |only
mets-0.2.2/mets/inst/misc/workshop-run.html |only
mets-0.2.2/mets/inst/misc/workshop.html | 1558 +++++++-------------------
mets-0.2.2/mets/man/ClaytonOakes.Rd | 18
mets-0.2.2/mets/man/Dbvn.Rd | 8
mets-0.2.2/mets/man/aalenfrailty.Rd | 9
mets-0.2.2/mets/man/binomial.twostage.Rd | 9
mets-0.2.2/mets/man/bptwin.Rd | 23
mets-0.2.2/mets/man/casewise.test.Rd | 17
mets-0.2.2/mets/man/cor.cif.Rd | 26
mets-0.2.2/mets/man/easy.binomial.twostage.Rd | 14
mets-0.2.2/mets/man/easy.twostage.Rd |only
mets-0.2.2/mets/man/fast.reshape.Rd | 20
mets-0.2.2/mets/man/internal.Rd | 5
mets-0.2.2/mets/man/mena.Rd |only
mets-0.2.2/mets/man/multcif.Rd | 5
mets-0.2.2/mets/man/phreg.Rd |only
mets-0.2.2/mets/man/prt.Rd | 4
mets-0.2.2/mets/man/random.cif.Rd | 6
mets-0.2.2/mets/man/twinstut.Rd | 4
mets-0.2.2/mets/man/twostage.Rd | 37
mets-0.2.2/mets/src/Makevars | 2
mets-0.2.2/mets/src/claytonoakes.cpp | 7
mets-0.2.2/mets/src/clusterindex.cpp | 30
mets-0.2.2/mets/src/fastcox.cpp |only
mets-0.2.2/mets/src/fastcox.h |only
mets-0.2.2/mets/src/prop-odd.cpp |only
mets-0.2.2/mets/src/tools.cpp | 4
70 files changed, 1807 insertions(+), 1913 deletions(-)
Title: R interface to the iPlant Discovery Environment
Diff between rPlant versions 2.3 dated 2013-03-12 and 2.7 dated 2013-05-21
Description: rPlant is an R interface to the the many computational
resources iPlant offers through their RESTful application
programming interface. Currently, rPlant functions interact
with the iPlant foundational API, the Taxonomic Name Resolution
Service API, and the Phylotastic Taxosaurus API. Before using
rPlant, users will have to register with the iPlant
Collaborative.
http://www.iplantcollaborative.org/discover/discovery-environment
Author: Barb Banbury
Maintainer: Barb Banbury
DESCRIPTION | 15 --
MD5 | 52 +++----
R/RunClustal.R | 17 +-
R/RunMafft.R | 17 +-
R/RunMuscle.R | 17 +-
R/RunParsdna.R | 20 +-
R/RunParsprotein.R | 21 +-
R/RunQuicktree.R | 17 +-
R/RunRAxMLdna.R | 22 +--
R/RunRAxMLprotein.R | 13 +
R/TNRS.R | 1
R/rPlant.R | 357 ++++++++++++++++++++++++++++++++-----------------
data/ex.lp.fasta.rda |binary
man/GetAppList.Rd | 5
man/GetToken.Rd | 6
man/ListDir.Rd | 7
man/RunClustal.Rd | 11 -
man/RunMafft.Rd | 9 -
man/RunMuscle.Rd | 10 -
man/RunParsdna.Rd | 7
man/RunParsprotein.Rd | 8 -
man/RunQuicktree.Rd | 8 -
man/RunRAxMLdna.Rd | 19 +-
man/RunRAxMLprotein.Rd | 10 -
man/SubmitJob.Rd | 25 ++-
man/TNRS.Rd | 3
man/UploadFile.Rd | 46 ++++--
27 files changed, 480 insertions(+), 263 deletions(-)
Title: Linear Latent Variable Models
Diff between lava versions 1.2.0 dated 2013-04-24 and 1.2.1 dated 2013-05-21
Description: Estimation and simulation of latent variable models
Author: Klaus K. Holst
Maintainer: Klaus K. Holst
lava-1.2.0/lava/simulate.R |only
lava-1.2.1/lava/DESCRIPTION | 10
lava-1.2.1/lava/MD5 | 81 +--
lava-1.2.1/lava/NAMESPACE | 2
lava-1.2.1/lava/NEWS | 3
lava-1.2.1/lava/R/Objective.R | 33 -
lava-1.2.1/lava/R/addhook.R | 37 -
lava-1.2.1/lava/R/bootstrap.R | 28 -
lava-1.2.1/lava/R/constrain.R | 25 -
lava-1.2.1/lava/R/covariance.R | 4
lava-1.2.1/lava/R/deriv.R | 55 +-
lava-1.2.1/lava/R/estimate.R | 91 ++-
lava-1.2.1/lava/R/estimate.multigroup.R | 50 +-
lava-1.2.1/lava/R/fix.R | 6
lava-1.2.1/lava/R/gof.R | 8
lava-1.2.1/lava/R/index.sem.R | 7
lava-1.2.1/lava/R/information.R | 33 -
lava-1.2.1/lava/R/labels.R | 4
lava-1.2.1/lava/R/lava-package.R | 2
lava-1.2.1/lava/R/logLik.R | 10
lava-1.2.1/lava/R/matrices.R | 638 +++++++++++++++++++--------
lava-1.2.1/lava/R/missingMLE.R | 34 -
lava-1.2.1/lava/R/modelPar.R | 100 ++--
lava-1.2.1/lava/R/moments.R | 1
lava-1.2.1/lava/R/multigroup.R | 36 +
lava-1.2.1/lava/R/plot.R | 17
lava-1.2.1/lava/R/predict.R | 2
lava-1.2.1/lava/R/residuals.R | 17
lava-1.2.1/lava/R/score.R | 118 ----
lava-1.2.1/lava/R/utils.R | 30 -
lava-1.2.1/lava/R/zblockdiag.R | 7
lava-1.2.1/lava/R/ztr.R | 2
lava-1.2.1/lava/demo/model.R | 2
lava-1.2.1/lava/inst/doc/reference.pdf |binary
lava-1.2.1/lava/inst/tests/test-constrain.R | 41 +
lava-1.2.1/lava/inst/tests/test-multigroup.R | 1
lava-1.2.1/lava/man/bootstrap.lvm.Rd | 8
lava-1.2.1/lava/man/constrain-set.Rd | 2
lava-1.2.1/lava/man/estimate.lvm.Rd | 4
lava-1.2.1/lava/man/gof.Rd | 9
lava-1.2.1/lava/man/internal.Rd | 1
lava-1.2.1/lava/man/labels-set.Rd | 3
42 files changed, 946 insertions(+), 616 deletions(-)
Title: Learn from training data then quickly fill in missing data.
Diff between FastImputation versions 1.0 dated 2012-04-10 and 1.1 dated 2013-05-21
More information about FastImputation at CRAN
Description: TrainFastImputation uses training data to describe a
multivariate normal distribution that the data approximates or
can be transformed into approximating and stores this
information as an object of class FastImputationPatterns. The
FastImputation function uses this FastImputationPatterns object
to impute (make a good guess at) missing data in a single line
or a whole dataframe of data. This approximates the process
used by Amelia [http://gking.harvard.edu/amelia/] but is much
faster when filling in values for a single line of data.
Author: Stephen R. Haptonstahl
Maintainer: Stephen R. Haptonstahl
DESCRIPTION | 14 ++++++++------
MD5 | 25 ++++++++++++++-----------
R/BoundNormalizedVariable.R | 22 ++++++++++++++++++----
R/FastImputation.R | 31 ++++++++++++++++++-------------
R/NormalizeBoundedVariable.R | 21 +++++++++++++++++----
data/FItest.RData |binary
data/FItrain.RData |binary
data/FItrue.RData |binary
inst/tests |only
man/FItest.Rd | 18 +++++++++++++++++-
man/FItrain.Rd | 18 +++++++++++++++++-
man/FItrue.Rd | 20 ++++++++++++++++++--
man/NormalizeBoundedVariable.Rd | 21 +++++++++++++++++++--
tests |only
14 files changed, 146 insertions(+), 44 deletions(-)
Permanent link
Title: Nonparametric Multiple Change Point Analysis of Multivariate
Data
Diff between ecp versions 1.5.2 dated 2013-02-08 and 1.5.3 dated 2013-05-21
Description: This package performs hierarchical change point analysis
through the use of U-statistics. Both agglomerative and
divisive procedures return the set of change points estimates,
and other summary information.
Author: Nicholas A. James and David S. Matteson
Maintainer: Nicholas A. James
ecp-1.5.2/ecp/data/acgh.RData |only
ecp-1.5.2/ecp/data/stpp.RData |only
ecp-1.5.2/ecp/man/acgh.RData.Rd |only
ecp-1.5.2/ecp/man/stpp.RData.Rd |only
ecp-1.5.3/ecp/DESCRIPTION | 19 ++++---
ecp-1.5.3/ecp/MD5 | 38 +++++++--------
ecp-1.5.3/ecp/NEWS | 24 +++++++++
ecp-1.5.3/ecp/R/e_agglomerative.R | 9 ++-
ecp-1.5.3/ecp/R/e_divisive.R | 81 ++++++++++++++++++--------------
ecp-1.5.3/ecp/R/energyChangePoint.R | 3 +
ecp-1.5.3/ecp/data/ACGH.RData |only
ecp-1.5.3/ecp/data/DJIA.RData |binary
ecp-1.5.3/ecp/data/STPP.RData |only
ecp-1.5.3/ecp/data/datalist | 4 -
ecp-1.5.3/ecp/inst/CITATION | 6 +-
ecp-1.5.3/ecp/man/ACGH.RData.Rd |only
ecp-1.5.3/ecp/man/DJIA.RData.Rd | 4 -
ecp-1.5.3/ecp/man/STPP.RData.Rd |only
ecp-1.5.3/ecp/man/e.agglo.Rd | 66 +++++++++++++++++---------
ecp-1.5.3/ecp/man/e.divisive.Rd | 70 ++++++++++++++++-----------
ecp-1.5.3/ecp/man/e.split.Rd | 14 ++---
ecp-1.5.3/ecp/man/sig.test.Rd | 17 +++---
ecp-1.5.3/ecp/man/splitPoint.Rd | 12 ++--
ecp-1.5.3/ecp/src/energyChangePoint.cpp | 36 ++++++++++++++
24 files changed, 265 insertions(+), 138 deletions(-)
Title: Helper package to facilitate the generation of distance matrices
used in the package spacom.
Diff between geospacom versions 0.5-4 dated 2013-03-17 and 0.5-6 dated 2013-05-21
Description: Generates distance matrices from shape files and
represents spatially weighted multilevel analysis results (see
spacom)
Author: Davide Morselli [aut], Mathieu Cossuta [aut, cre], Till Junge
[aut], Sandra Penic [aut], Guy Elcheroth [ctb], Stephanie
Glaeser [ctb]
Maintainer: Davide Morselli
DESCRIPTION | 10 +++++-----
MD5 | 20 ++++++++++----------
R/ReadPoly.R | 2 +-
R/fixholes.R | 9 +++------
data/CH1903.rda |binary
data/GPS.rda |binary
data/yu.reg.rda |binary
man/DistanceMatrix.Rd | 15 ++-------------
man/ImagePoly.Rd | 20 ++++++--------------
man/ReadPoly.Rd | 4 ++--
man/geospacom-package.Rd | 10 +++++-----
11 files changed, 34 insertions(+), 56 deletions(-)
Title: Exact Distributions for Rank and Permutation Tests
Diff between exactRankTests versions 0.8-24 dated 2013-01-12 and 0.8-25 dated 2013-05-21
More information about exactRankTests at CRAN
Description: Computes exact conditional p-values and quantiles using an
implementation of the Shift-Algorithm by Streitberg & Roehmel.
Author: Torsten Hothorn and Kurt Hornik
Maintainer: Torsten Hothorn
DESCRIPTION | 9 +++++----
MD5 | 30 +++++++++++++++---------------
R/perm.test.R | 10 +++++-----
data/ASAT.rda |binary
data/bloodp.rda |binary
data/ears.rda |binary
data/glioma.rda |binary
data/globulin.rda |binary
data/lungcancer.rda |binary
data/neuropathy.rda |binary
data/ocarcinoma.rda |binary
data/rotarod.rda |binary
data/sal.rda |binary
inst/NEWS | 6 ++++++
tests/dtest.R | 16 ++++++++++++----
tests/dtest.Rout.save | 25 ++++++++++++++++++-------
16 files changed, 61 insertions(+), 35 deletions(-)
Permanent link
Title: Fire Weather Index System and Fire Behaviour Prediction System
Calculations
Diff between fwi.fbp versions 1.01 dated 2012-10-30 and 1.2 dated 2013-05-21
Description: This package provides three new functions to calculate the
outputs of the two main components of the Canadian Forest Fire
Danger Rating System (CFFDRS): the Fire Weather Index (FWI)
System and the Fire Behaviour Prediction (FBP) System.
Author: Xianli Wang, Alan Cantin, Marc-Andre Parisien, Mike Wotton,
Kerry Anderson, and Mike Flannigan
Maintainer: Alan Cantin
DESCRIPTION | 12 +-
MD5 | 16 +--
R/fwi.r | 235 ++++++++++++++++++++++++-------------------------
data/test_fbp.csv.gz |binary
data/test_fwi.csv.gz |binary
man/fbp.Rd | 9 +
man/fwi.Rd | 9 +
man/fwi.fbp-package.Rd | 4
man/fwiBAT.Rd | 9 +
9 files changed, 156 insertions(+), 138 deletions(-)
Title: Multivariate Dependence with Copulas
Diff between copula versions 0.999-6 dated 2013-05-14 and 0.999-7 dated 2013-05-21
Description: Classes (S4) of commonly used elliptical, Archimedean,
extreme value and some more copula families. Methods for
density, distribution, random number generation, bivariate
dependence measures, perspective and contour plots. Fitting
copula models including variance estimates. Independence and
serial (univariate and multivariate) independence tests, and
other copula related tests. Goodness-of-fit tests for copulas
based on multipliers, the parametric bootstrap with several
transformation options. Merged former package 'nacopula' for
nested Archimedean copulas: Efficient sampling algorithms,
various estimators, goodness-of-fit tests and related tools and
special functions.
Author: Marius Hofert
Maintainer: Martin Maechler
DESCRIPTION | 10 +++----
MD5 | 16 +++++------
NAMESPACE | 2 -
R/empcop.R | 2 -
R/gofTests.R | 54 +++++++++++++-------------------------
inst/doc/Frank-Rmpfr.pdf |binary
inst/doc/nacopula-pkg.pdf |binary
man/empcop.Rd | 46 ++++++++++++++------------------
man/gofCopula.Rd | 65 ++++++++++++++++++++++++++++++++++------------
9 files changed, 104 insertions(+), 91 deletions(-)
Title: Miscellaneous Useful Functions
Diff between miscFuncs versions 1.2 dated 2012-06-14 and 1.2-2 dated 2013-05-21
Description: LaTeX tables, Kalman filter, web scraping, development
tools
Author: Benjamin M. Taylor
Maintainer: Benjamin M. Taylor
miscFuncs-1.2-2/miscFuncs/DESCRIPTION | 11 -
miscFuncs-1.2-2/miscFuncs/MD5 | 47 +++----
miscFuncs-1.2-2/miscFuncs/NAMESPACE | 10 -
miscFuncs-1.2-2/miscFuncs/R/KFtemplates.R | 3
miscFuncs-1.2-2/miscFuncs/R/latextable.R | 61 +++------
miscFuncs-1.2-2/miscFuncs/R/roxbc.R | 4
miscFuncs-1.2-2/miscFuncs/R/roxtext.R | 4
miscFuncs-1.2-2/miscFuncs/inst/doc/miscFuncs.R |only
miscFuncs-1.2-2/miscFuncs/inst/doc/miscFuncs.Rtex | 8 -
miscFuncs-1.2-2/miscFuncs/inst/doc/miscFuncs.pdf |binary
miscFuncs-1.2-2/miscFuncs/man/EKFadvance.Rd | 61 ++++++---
miscFuncs-1.2-2/miscFuncs/man/KFadvance.Rd | 94 +++++++++-----
miscFuncs-1.2-2/miscFuncs/man/KFadvanceAR2.Rd | 107 +++++++++++------
miscFuncs-1.2-2/miscFuncs/man/KFtemplates.Rd | 18 ++
miscFuncs-1.2-2/miscFuncs/man/bin.Rd | 20 ++-
miscFuncs-1.2-2/miscFuncs/man/generic.Rd | 32 +++--
miscFuncs-1.2-2/miscFuncs/man/getstrbetween.Rd | 37 ++++-
miscFuncs-1.2-2/miscFuncs/man/getwikicoords.Rd | 30 +++-
miscFuncs-1.2-2/miscFuncs/man/latextable.Rd | 61 ++++++---
miscFuncs-1.2-2/miscFuncs/man/method.Rd | 29 +++-
miscFuncs-1.2-2/miscFuncs/man/roxbc.Rd | 25 ++-
miscFuncs-1.2-2/miscFuncs/man/roxtext.Rd | 29 +++-
miscFuncs-1.2-2/miscFuncs/man/timeop.Rd | 20 ++-
miscFuncs-1.2-2/miscFuncs/man/vdc.Rd | 21 ++-
miscFuncs-1.2/miscFuncs/inst/doc/miscFuncs.Rtex.backup |only
miscFuncs-1.2/miscFuncs/man/dot-onAttach.Rd |only
26 files changed, 474 insertions(+), 258 deletions(-)
Title: R tools for making it easier to combine and clean data sets.
Diff between DataCombine versions 0.1.3 dated 2013-05-16 and 0.1.5 dated 2013-05-21
Description: R tools for combining and cleaning data sets, including
filling in missing observations with data from another data
frame.
Author: Christopher Gandrud
Maintainer: Christopher Gandrud
DESCRIPTION | 17 +++++++++--------
MD5 | 15 +++++++++------
NAMESPACE | 3 +++
NEWS | 11 +++++++++++
R/MoveFront.R | 44 +++++++++++++++++++++++++++++---------------
R/slide.R |only
README.md | 20 ++++++++++++++------
man/MoveFront.Rd | 22 +++++++++++++++-------
man/shift.Rd |only
man/slide.Rd |only
10 files changed, 90 insertions(+), 42 deletions(-)
Title: FastICA Algorithms to perform ICA and Projection Pursuit
Diff between fastICA versions 1.1-16 dated 2012-05-21 and 1.2-0 dated 2013-05-21
Description: Implementation of FastICA algorithm to perform Independent
Component Analysis (ICA) and Projection Pursuit.
Author: J L Marchini
Maintainer: Brian Ripley
fastICA-1.1-16/fastICA/cleanup |only
fastICA-1.1-16/fastICA/configure |only
fastICA-1.1-16/fastICA/configure.ac |only
fastICA-1.1-16/fastICA/configure.win |only
fastICA-1.1-16/fastICA/src/Makevars.in |only
fastICA-1.1-16/fastICA/src/Makevars.win |only
fastICA-1.1-16/fastICA/src/lsame.unused |only
fastICA-1.1-16/fastICA/src/sblas.unused |only
fastICA-1.1-16/fastICA/src/slamc.unused |only
fastICA-1.1-16/fastICA/src/slapack.unused |only
fastICA-1.2-0/fastICA/DESCRIPTION | 9 -
fastICA-1.2-0/fastICA/MD5 | 21 --
fastICA-1.2-0/fastICA/NAMESPACE | 2
fastICA-1.2-0/fastICA/R/fastICA.R | 35 ++--
fastICA-1.2-0/fastICA/man/fastICA.Rd | 8 -
fastICA-1.2-0/fastICA/src/Makevars |only
fastICA-1.2-0/fastICA/src/ica.c | 231 ++++++++++++++----------------
17 files changed, 145 insertions(+), 161 deletions(-)
Title: Statistical significance of Sharpe ratio
Diff between SharpeR versions 0.1305 dated 2013-05-11 and 0.1306 dated 2013-05-21
Description: a collection of tools for analyzing significance of
trading strategies, based on the Sharpe ratio and overfit of
the same.
Author: Steven E. Pav
Maintainer: Steven E. Pav
SharpeR-0.1305/SharpeR/inst/doc/SharpeR.R |only
SharpeR-0.1305/SharpeR/inst/doc/SharpeR.Rnw |only
SharpeR-0.1305/SharpeR/inst/doc/SharpeR.bib |only
SharpeR-0.1305/SharpeR/inst/tests/test-estimation.r |only
SharpeR-0.1306/SharpeR/DESCRIPTION | 8
SharpeR-0.1306/SharpeR/MD5 | 49 ++---
SharpeR-0.1306/SharpeR/Makefile | 165 +++++++++++++----
SharpeR-0.1306/SharpeR/R/distributions.r | 18 +
SharpeR-0.1306/SharpeR/R/estimation.r | 20 +-
SharpeR-0.1306/SharpeR/R/sr.r | 10 -
SharpeR-0.1306/SharpeR/R/tests.r | 10 -
SharpeR-0.1306/SharpeR/README.md | 2
SharpeR-0.1306/SharpeR/inst/doc/SharpeR.pdf |binary
SharpeR-0.1306/SharpeR/inst/doc/figure |only
SharpeR-0.1306/SharpeR/inst/doc/index.html |only
SharpeR-0.1306/SharpeR/inst/tests/test-distributions.r | 15 -
SharpeR-0.1306/SharpeR/man/as.sr.Rd | 6
SharpeR-0.1306/SharpeR/man/as.sropt.Rd | 2
SharpeR-0.1306/SharpeR/man/confint.Rd | 8
SharpeR-0.1306/SharpeR/man/dsr.Rd | 12 -
SharpeR-0.1306/SharpeR/man/dsropt.Rd | 2
SharpeR-0.1306/SharpeR/man/inference.Rd | 10 -
SharpeR-0.1306/SharpeR/man/power.sr_test.Rd | 2
SharpeR-0.1306/SharpeR/man/se.Rd | 2
SharpeR-0.1306/SharpeR/man/sr.Rd | 2
SharpeR-0.1306/SharpeR/man/sr_equality_test.Rd | 4
SharpeR-0.1306/SharpeR/man/sr_test.Rd | 2
SharpeR-0.1306/SharpeR/man/sropt_test.Rd | 2
28 files changed, 236 insertions(+), 115 deletions(-)
Title: ML and MCMC Methods for Pedigree Reconstruction and Analysis
Diff between MasterBayes versions 2.50 dated 2012-07-15 and 2.50.1 dated 2013-05-21
Description: The primary aim of MasterBayes is to use MCMC techniques
to integrate over uncertainty in pedigree configurations
estimated from molecular markers and phenotypic data. Emphasis
is put on the marginal distribution of parameters that relate
the phenotypic data to the pedigree. All simulation is done in
compiled C++ for efficiency.
Author: Jarrod Hadfield
Maintainer: Jarrod Hadfield
MasterBayes-2.50.1/MasterBayes/DESCRIPTION | 9
MasterBayes-2.50.1/MasterBayes/MD5 | 10
MasterBayes-2.50.1/MasterBayes/src/Makevars | 2
MasterBayes-2.50.1/MasterBayes/src/matrix.h | 350 ++++++++++++------------
MasterBayes-2.50.1/MasterBayes/src/smath.h | 34 +-
MasterBayes-2.50.1/MasterBayes/src/stat.h | 2
MasterBayes-2.50/MasterBayes/inst/doc/.Rhistory |only
7 files changed, 204 insertions(+), 203 deletions(-)