Title: Functions for Systems Factorial Technology Analysis of Data
Diff between sft versions 0.1-0 dated 2013-02-01 and 0.2-1 dated 2013-05-27
Description: This package contains a series of tools for analyzing
Systems Factorial Technology data. This includes functions for
plotting and statistically testing capacity coefficient
functions and survivor interaction contrast functions.
Author: Joe Houpt
Maintainer: Joe Houpt
sft-0.1-0/sft/man/ucipTest.Rd |only
sft-0.2-1/sft/DESCRIPTION | 7 +
sft-0.2-1/sft/MD5 | 32 ++++----
sft-0.2-1/sft/NAMESPACE | 2
sft-0.2-1/sft/R/CapacityNA.R | 140 +++++++++++++++++++++++++----------
sft-0.2-1/sft/R/sic.R | 76 ++++++++++---------
sft-0.2-1/sft/R/ucipTest.R | 17 +++-
sft-0.2-1/sft/man/capacity.and.Rd | 11 +-
sft-0.2-1/sft/man/capacity.or.Rd | 9 +-
sft-0.2-1/sft/man/capacityGroup.Rd | 16 ++--
sft-0.2-1/sft/man/estimateNAH.Rd | 2
sft-0.2-1/sft/man/estimateNAK.Rd | 2
sft-0.2-1/sft/man/estimateUCIPand.Rd | 4 -
sft-0.2-1/sft/man/estimateUCIPor.Rd | 4 -
sft-0.2-1/sft/man/mic_test.Rd | 4 -
sft-0.2-1/sft/man/sic.Rd | 6 -
sft-0.2-1/sft/man/sic_test.Rd | 4 -
sft-0.2-1/sft/man/ucip_test.Rd |only
18 files changed, 218 insertions(+), 118 deletions(-)
Title: High dimensional multiclass classification using sparse group
lasso
Diff between msgl versions 0.1.2 dated 2013-05-25 and 0.1.3 dated 2013-05-27
Description: Sparse group lasso multiclass classification, suitable for
high dimensional problems with many classes. Fast algorithm for
solving the multinomial sparse group lasso convex optimization
problem. This package apply template metaprogramming
techniques, therefore -- when compiling the package from source
-- a high level of optimization is needed to gain full speed
(e.g. for the GCC compiler use -O3). Use of multiple processors
for cross validation and subsampling is supported through
OpenMP. The Armadillo C++ library is used as the primary linear
algebra engine. Armadillo is licensed under the MPL 2.0. The
Armadillo C++ library is primarily developed at NICTA
(Australia) by Conrad Sanderson, with contributions from around
the world. Furthermore the package utilize various Boost
libraries, in particular the Tuple library by Jaakko Jarvi and
the Random library by Jens Maurer. The Boost libraries are
licensed under the Boost Software License.
Author: Martin Vincent
Maintainer: Martin Vincent
msgl-0.1.2/msgl/src/include/armadillo.hpp |only
msgl-0.1.2/msgl/src/include/armadillo_bits |only
msgl-0.1.2/msgl/src/include/boost |only
msgl-0.1.2/msgl/src/include/interrupt_handling.h |only
msgl-0.1.2/msgl/src/include/rtools/rStream.h |only
msgl-0.1.2/msgl/src/include/sgl/Backtrace.h |only
msgl-0.1.3/msgl/DESCRIPTION | 33
msgl-0.1.3/msgl/MD5 | 3820 ----------
msgl-0.1.3/msgl/R/msgl_multinomial.R | 24
msgl-0.1.3/msgl/man/msgl.Rd | 2
msgl-0.1.3/msgl/man/msgl.cv.Rd | 2
msgl-0.1.3/msgl/src/Makevars | 4
msgl-0.1.3/msgl/src/include/Indices/Indices.h | 5
msgl-0.1.3/msgl/src/include/Indices/IntegerSet.h | 6
msgl-0.1.3/msgl/src/include/Indices/SubMatrix.h | 2
msgl-0.1.3/msgl/src/include/msgl/msgl_mg.h | 104
msgl-0.1.3/msgl/src/include/msgl/msgl_mg_loss.h | 8
msgl-0.1.3/msgl/src/include/msgl/msgl_multinomial_weighted_sparse.h | 103
msgl-0.1.3/msgl/src/include/msgl_R_interface.h | 49
msgl-0.1.3/msgl/src/include/rtools.h | 7
msgl-0.1.3/msgl/src/include/rtools/get_value.h | 74
msgl-0.1.3/msgl/src/include/rtools/rList.h | 30
msgl-0.1.3/msgl/src/include/rtools/rObject.h | 96
msgl-0.1.3/msgl/src/include/sgl.h | 21
msgl-0.1.3/msgl/src/include/sgl/SglOptimizer.h | 61
msgl-0.1.3/msgl/src/include/sgl/config.h | 12
msgl-0.1.3/msgl/src/include/sgl/interface_basic.h | 1002 +-
msgl-0.1.3/msgl/src/include/sgl/simple_timer.h | 21
msgl-0.1.3/msgl/src/rmsgl.cpp | 15
msgl-0.1.3/msgl/tests/msgl_cv_test_1.R | 4
msgl-0.1.3/msgl/tests/msgl_cv_test_2.R | 4
msgl-0.1.3/msgl/tests/msgl_cv_test_3.R | 4
msgl-0.1.3/msgl/tests/msgl_cv_test_4.R | 4
msgl-0.1.3/msgl/tests/msgl_grouping_test_1.R | 12
msgl-0.1.3/msgl/tests/msgl_grouping_test_2.R | 13
msgl-0.1.3/msgl/tests/msgl_grouping_test_3.R | 10
msgl-0.1.3/msgl/tests/msgl_grouping_test_4.R | 16
msgl-0.1.3/msgl/tests/msgl_sub_test_1.R | 4
msgl-0.1.3/msgl/tests/msgl_test_2.R | 4
msgl-0.1.3/msgl/tests/msgl_test_3.R | 4
msgl-0.1.3/msgl/tests/msgl_test_4.R | 4
msgl-0.1.3/msgl/tests/msgl_verbose_test_1.R | 2
msgl-0.1.3/msgl/tests/msgl_verbose_test_2.R | 2
msgl-0.1.3/msgl/tests/msgl_verbose_test_3.R | 2
44 files changed, 891 insertions(+), 4699 deletions(-)
Title: Hierarchical Exponential-Family Random Graph Models with Local
Dependence
Diff between hergm versions 1.3-6 dated 2013-04-22 and 1.3-7 dated 2013-05-27
Description: The R package 'hergm' implements Hierarchical
Exponential-Family Random Graph Models (HERGMs), which can be
used to model a wide range of relational data (networks).
'hergm' implements both simulation and Bayesian inference.
Author: Michael Schweinberger
Maintainer: Michael Schweinberger
hergm-1.3-6/hergm/src/h_ergm_initialize.c |only
hergm-1.3-7/hergm/DESCRIPTION | 12
hergm-1.3-7/hergm/MD5 | 61 +-
hergm-1.3-7/hergm/R/hergm.R | 24
hergm-1.3-7/hergm/R/hergm.mcmc.R | 25
hergm-1.3-7/hergm/R/hergm.preprocess.R | 13
hergm-1.3-7/hergm/R/hergm.set.mcmc.R | 6
hergm-1.3-7/hergm/R/hergm.wrapper.R | 22
hergm-1.3-7/hergm/R/zzz.R | 2
hergm-1.3-7/hergm/man/hergm.Rd | 3
hergm-1.3-7/hergm/src/MCMC.c | 45 +
hergm-1.3-7/hergm/src/MCMC.h | 11
hergm-1.3-7/hergm/src/MHproposal.c | 22
hergm-1.3-7/hergm/src/MHproposal.h | 30 -
hergm-1.3-7/hergm/src/MHproposals.c | 573 ++-----------------
hergm-1.3-7/hergm/src/MHproposals.h | 17
hergm-1.3-7/hergm/src/changestat.c | 11
hergm-1.3-7/hergm/src/changestat.h | 46 +
hergm-1.3-7/hergm/src/changestats.c | 891 +++++++++++++++++++-----------
hergm-1.3-7/hergm/src/changestats.h | 19
hergm-1.3-7/hergm/src/edgelist.c | 11
hergm-1.3-7/hergm/src/edgelist.h | 11
hergm-1.3-7/hergm/src/edgetree.c | 137 +++-
hergm-1.3-7/hergm/src/edgetree.h | 34 -
hergm-1.3-7/hergm/src/h_ergm.c | 40 -
hergm-1.3-7/hergm/src/h_ergm.h | 5
hergm-1.3-7/hergm/src/h_ergm_interface.c | 12
hergm-1.3-7/hergm/src/h_ergm_mcmc.c | 25
hergm-1.3-7/hergm/src/model.c | 42 -
hergm-1.3-7/hergm/src/model.h | 12
hergm-1.3-7/hergm/src/netstats.c | 19
hergm-1.3-7/hergm/src/netstats.h | 13
32 files changed, 1119 insertions(+), 1075 deletions(-)
Title: Estimation and simulation of first-order Beta-t-EGARCH models
Diff between betategarch versions 1.3 dated 2012-09-06 and 2.0 dated 2013-05-27
Description: Estimation and simulation of first-order Beta-t-EGARCH
models (one-component, two-component, skewed versions).
Author: Genaro Sucarrat
Maintainer: Genaro Sucarrat
DESCRIPTION | 21 ++-----
MD5 | 44 ++++++++++-----
NAMESPACE | 3 -
R/betategarch-internal.R | 28 +++++++--
R/dst.R |only
R/rst.R |only
R/st.mean.R |only
R/tegarch.est.R | 129 +++++++++++++++++++++++++++++++++++++++------
R/tegarch.fit.R | 29 ++++++++--
R/tegarch.logl.R | 62 ++++++++++-----------
R/tegarch.logl2.R |only
R/tegarch.recursion.R | 63 ++++++++++++++-------
R/tegarch.recursion2.R |only
R/tegarch.sim.R | 60 +++++++++++---------
R/tegarch.sim2.R |only
data |only
man/apple.Rd |only
man/betategarch-package.Rd | 29 ++++++----
man/dst.Rd |only
man/rst.Rd |only
man/st.mean.Rd |only
man/tegarch.est.Rd | 108 ++++++++++++++++++++-----------------
man/tegarch.fit.Rd | 49 +++++++++--------
man/tegarch.logl.Rd | 59 +++++++-------------
man/tegarch.logl2.Rd |only
man/tegarch.recursion.Rd | 68 +++++++++--------------
man/tegarch.recursion2.Rd |only
man/tegarch.sim.Rd | 52 +++++++-----------
man/tegarch.sim2.Rd |only
src/betategarch.cpp | 34 ++++++++++-
30 files changed, 506 insertions(+), 332 deletions(-)
Title: Time-dependent ROC curve and AUC for censored survival data
Diff between timeROC versions 0.1 dated 2012-11-03 and 0.2 dated 2013-05-27
Description: Estimation of time-dependent ROC curve and area under time
dependent ROC curve (AUC) in the presence of censored data,
with or without competing risks. Confidence intervals of AUCs
and tests for comparing AUCs of two rival markers measured on
the same subjects can be computed, using the iid-representation
of the AUC estimator. Plot functions for time-dependent ROC
curves and AUC curves are provided. Time-dependent Positive
Predictive Values (PPV) and Negative Predictive Values (NPV)
can also be computed.
Author: Paul Blanche
Maintainer: Paul Blanche
timeROC-0.1/timeROC/man/plot.ipcwcompetingrisksROC.Rd |only
timeROC-0.1/timeROC/man/plot.ipcwsurvivalROC.Rd |only
timeROC-0.2/timeROC/DESCRIPTION | 14
timeROC-0.2/timeROC/MD5 | 49 +
timeROC-0.2/timeROC/NAMESPACE | 5
timeROC-0.2/timeROC/NEWS |only
timeROC-0.2/timeROC/R/ComputeIIDKM.R |only
timeROC-0.2/timeROC/R/SeSpPPVNPV.R |only
timeROC-0.2/timeROC/R/compare_ipcwROC.R | 65 --
timeROC-0.2/timeROC/R/compute_iid_ac_competing_risks.R | 239 --------
timeROC-0.2/timeROC/R/compute_iid_rep_2.R | 28 -
timeROC-0.2/timeROC/R/compute_iid_ss_competing_risks_2.R | 206 -------
timeROC-0.2/timeROC/R/confint_ipcwROC.R | 118 +++-
timeROC-0.2/timeROC/R/plot.ipcwcompetingrisksROC.R | 21
timeROC-0.2/timeROC/R/plot.ipcwsurvivalROC.R | 12
timeROC-0.2/timeROC/R/plotAUCcurve.R |only
timeROC-0.2/timeROC/R/plotAUCcurveDiff.R |only
timeROC-0.2/timeROC/R/print.ipcwcompetingrisksROC.R | 26
timeROC-0.2/timeROC/R/print.ipcwcompetingrisksSeSpPPVNPV.R |only
timeROC-0.2/timeROC/R/print.ipcwsurvivalROC.R | 23
timeROC-0.2/timeROC/R/print.ipcwsurvivalSeSpPPVNPV.R |only
timeROC-0.2/timeROC/R/timeROC_3.R | 356 ++++---------
timeROC-0.2/timeROC/THANKS | 2
timeROC-0.2/timeROC/man/Paquid.Rd | 2
timeROC-0.2/timeROC/man/SeSpPPVNPV.Rd |only
timeROC-0.2/timeROC/man/compare.Rd | 10
timeROC-0.2/timeROC/man/confint.Rd | 71 ++
timeROC-0.2/timeROC/man/plot.Rd |only
timeROC-0.2/timeROC/man/plotAUCcurve.Rd |only
timeROC-0.2/timeROC/man/plotAUCcurveDiff.Rd |only
timeROC-0.2/timeROC/man/print.Rd | 44 +
timeROC-0.2/timeROC/man/timeROC.Rd | 32 -
32 files changed, 480 insertions(+), 843 deletions(-)
Title: Categorical Data Analysis and Visualization
Diff between extracat versions 1.6-2 dated 2013-05-03 and 1.6-3 dated 2013-05-27
Description: Categorical Data Analysis and Visualization
Author: Alexander Pilhoefer
Maintainer: Alexander Pilhoefer
extracat-1.6-2/extracat/R/tfluctile.R |only
extracat-1.6-3/extracat/DESCRIPTION | 10 +-
extracat-1.6-3/extracat/MD5 | 50 +++++-----
extracat-1.6-3/extracat/NAMESPACE | 2
extracat-1.6-3/extracat/R/chidist.R |only
extracat-1.6-3/extracat/R/fluctuations.R | 62 ++++++++----
extracat-1.6-3/extracat/R/getcolors.R |only
extracat-1.6-3/extracat/R/heattile.R | 134 ++-------------------------
extracat-1.6-3/extracat/R/hexpie.R | 95 -------------------
extracat-1.6-3/extracat/R/newrmb5.R | 142 +++++++++++++++++++++++------
extracat-1.6-3/extracat/R/tfluctile.r |only
extracat-1.6-3/extracat/inst |only
extracat-1.6-3/extracat/man/approx.dcor.Rd | 15 ++-
extracat-1.6-3/extracat/man/arsim.Rd | 4
extracat-1.6-3/extracat/man/barysort.Rd | 10 +-
extracat-1.6-3/extracat/man/cpcp.Rd | 5 -
extracat-1.6-3/extracat/man/dcor.Rd | 5 -
extracat-1.6-3/extracat/man/dendro.Rd | 3
extracat-1.6-3/extracat/man/extracat.Rd | 14 +-
extracat-1.6-3/extracat/man/fluctile.Rd | 7 +
extracat-1.6-3/extracat/man/getcolors.Rd |only
extracat-1.6-3/extracat/man/heattile.Rd | 15 ++-
extracat-1.6-3/extracat/man/listen.Rd | 5 -
extracat-1.6-3/extracat/man/resort.Rd | 5 -
extracat-1.6-3/extracat/man/rmb.Rd | 26 ++---
extracat-1.6-3/extracat/man/rmbmat.Rd | 19 ++-
extracat-1.6-3/extracat/man/spread.Rd | 6 -
extracat-1.6-3/extracat/man/tfluctile.Rd | 2
extracat-1.6-3/extracat/src/optile.c | 17 ++-
29 files changed, 293 insertions(+), 360 deletions(-)
Title: comparison of medical forms in CDISC ODM format
Diff between compareODM versions 1.1 dated 2012-06-12 and 1.2 dated 2013-05-27
Description: Input: 2 ODM files (ODM version 1.3) Output: list of
identical, matching, similar and differing data items
Author: Martin Dugas
Maintainer: Martin Dugas
DESCRIPTION | 9 +-
MD5 | 4 -
R/compareODM.R | 184 ++++++++++++++++++++++++++++++++++++++-------------------
3 files changed, 132 insertions(+), 65 deletions(-)
Title: An R pandoc writer
Diff between pander versions 0.3.1 dated 2013-03-10 and 0.3.7 dated 2013-05-27
Description: Contains some functions catching all messages, stdout and
other useful information while evaluating R code and other
helpers to return user specified text elements (like: header,
paragraph, table, image, lists etc.) in Pandoc's markdown or
several type of R objects similarly automatically transformed
to markdown format. Also capable of exporting/converting (the
resulting) complex Pandoc documents to e.g. HTML, pdf, docx or
odt. This latter reporting feature is supported in brew syntax
or with a custom reference class with a smarty caching backend.
Author: Gergely Daróczi
Maintainer: Gergely Daróczi
DESCRIPTION | 12
MD5 | 64 +-
NAMESPACE | 7
NEWS | 41 +
R/R5.R | 1
R/S3.R | 129 ++---
R/brew.R | 26 -
R/convert.R | 10
R/evals.R | 123 +++--
R/helpers.R | 847 +++++-------------------------------
R/options.R | 74 +--
R/pandoc.R |only
README.md | 462 ++++++++++++++-----
TODO.md | 7
inst/README.brew | 206 ++++++++
inst/includes/javascripts/custom.js | 4
inst/tests/test-S3.R | 144 +++++-
inst/tests/test-brew.R | 2
inst/tests/test-evals.R | 15
inst/tests/test-helpers.R |only
man/Pandoc.Rd | 7
man/Pandoc.brew.Rd | 22
man/Pandoc.convert.Rd | 5
man/emphasize.rows.Rd |only
man/evals.Rd | 54 +-
man/get.alignment.Rd |only
man/get.caption.Rd |only
man/get.emphasize.Rd |only
man/get.storage.Rd |only
man/has.rownames.Rd |only
man/p.Rd | 6
man/pander.Rd | 18
man/panderOptions.Rd | 80 ++-
man/pandoc.list.return.Rd | 10
man/pandoc.table.return.Rd | 110 +++-
man/redraw.recordedplot.Rd | 6
man/set.alignment.Rd | 18
37 files changed, 1330 insertions(+), 1180 deletions(-)
Title: C5.0 Decision Trees and Rule-Based Models
Diff between C50 versions 0.1.0-14 dated 2013-02-21 and 0.1.0-15 dated 2013-05-27
Description: C5.0 decision trees and rule-based models for pattern
recognition
Author: Max Kuhn, Steve Weston, Nathan Coulter. C code for C5.0 by R.
Quinlan
Maintainer: Max Kuhn
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/QuinlanAttributes.R | 2 +-
R/makeNamesFile.R | 2 +-
4 files changed, 9 insertions(+), 9 deletions(-)
More information about SesIndexCreatoR at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-03-06 1.8
2011-04-13 1.5
Title: Spatial Point Pattern analysis, model-fitting, simulation, tests
Diff between spatstat versions 1.31-2 dated 2013-04-26 and 1.31-3 dated 2013-05-27
Description: A package for analysing spatial data, mainly Spatial Point
Patterns, including multitype/marked points and spatial
covariates, in any two-dimensional spatial region. Also
supports three-dimensional point patterns, and space-time point
patterns in any number of dimensions. Contains over 1000
functions for plotting spatial data, exploratory data analysis,
model-fitting, simulation, spatial sampling, model diagnostics,
and formal inference. Data types include point patterns, line
segment patterns, spatial windows, pixel images and
tessellations. Exploratory methods include K-functions,
nearest neighbour distance and empty space statistics, Fry
plots, pair correlation function, kernel smoothed intensity,
relative risk estimation with cross-validated bandwidth
selection, mark correlation functions, segregation indices,
mark dependence diagnostics etc. Point process models can be
fitted to point pattern data using functions ppm, kppm, slrm
similar to glm. Models may include dependence on covariates,
interpoint interaction, cluster formation and dependence on
marks. Fitted models can be simulated automatically. Also
provides facilities for formal inference (such as chi-squared
tests) and model diagnostics (including simulation envelopes,
residuals, residual plots and Q-Q plots).
Author: Adrian Baddeley
Maintainer: Adrian Baddeley
DESCRIPTION | 18 -
MD5 | 307 +++++++++++++------------
NEWS | 64 +++++
R/Fest.R | 2
R/GJfox.R | 2
R/Gest.R | 2
R/Gmulti.R | 2
R/Hest.R | 2
R/Jinhom.R | 4
R/Kcom.R | 10
R/Kinhom.R | 2
R/Kmeasure.R | 2
R/Kmulti.inhom.R | 4
R/Kscaled.R | 2
R/Tstat.R | 2
R/addvar.R | 8
R/areadiff.R | 17 -
R/areainter.R | 166 +++++++++++++
R/as.im.R | 4
R/badgey.R | 2
R/centroid.R | 6
R/clip.psp.R | 15 -
R/closepairs.R | 57 ++++
R/deltametric.R | 4
R/density.ppp.R | 2
R/dg.R | 2
R/disc.R | 4
R/distances.R | 8
R/distances.psp.R | 8
R/distbdry.R | 10
R/distfun.R | 4
R/edgeRipley.R | 10
R/edgeTrans.R | 2
R/edges2triangles.R | 34 ++
R/envelope.R | 559 +++++++++++++++++++++++++++++++++--------------
R/fgk3.R | 6
R/fii.R | 10
R/fiksel.R | 2
R/fryplot.R | 2
R/geyer.R | 142 ++++++++---
R/hardcore.R | 2
R/images.R | 16 -
R/infline.R | 19 -
R/kmrs.R | 10
R/levelset.R | 6
R/lineardisc.R | 16 -
R/linnet.R | 7
R/lurking.R | 4
R/mincontrast.R | 6
R/mpl.R | 92 ++++++-
R/multihard.R | 5
R/multistrhard.R | 7
R/nearestsegment.R | 4
R/nnclean.R | 4
R/nnfun.R | 2
R/nnmap.R |only
R/pairsat.family.R | 16 -
R/pairwise.family.R | 52 ++++
R/pcfcross.R | 2
R/plot.fv.R | 88 ++++---
R/plot.im.R | 11
R/pp3.R | 6
R/ppmclass.R | 21 +
R/ppx.R | 2
R/predict.ppm.R | 12 -
R/primefactors.R | 4
R/psstG.R | 4
R/quadclass.R | 4
R/quadscheme.R | 71 +++--
R/rLGCP.R | 2
R/rPerfect.R | 4
R/rat.R | 2
R/relrisk.R | 10
R/rshift.R | 6
R/slrm.R | 4
R/smooth.ppp.R | 10
R/strauss.R | 15 +
R/strausshard.R | 4
R/tess.R | 7
R/unnormdensity.R | 4
R/util.R | 83 ++++++
R/vcov.ppm.R | 532 ++++++++++++++++++++++++--------------------
R/versions.R | 16 -
R/weights.R | 20 -
R/window.R | 4
R/wingeom.R | 4
R/xypolygon.R | 6
R/xysegment.R | 6
inst/doc/getstart.pdf |binary
inst/doc/shapefiles.pdf |binary
man/edges2triangles.Rd | 3
man/edges2vees.Rd |only
man/fitin.Rd | 14 +
man/kppm.Rd | 2
man/lgcp.estK.Rd | 4
man/lgcp.estpcf.Rd | 2
man/methods.fii.Rd |only
man/nncross.Rd | 10
man/nnmap.Rd |only
man/pool.envelope.Rd | 48 +++-
man/ppm.Rd | 2
man/predict.ppm.Rd | 10
man/rLGCP.Rd | 2
man/reach.Rd | 13 +
man/spatstat-internal.Rd | 45 ++-
man/spatstat-package.Rd | 2
src/Kborder.c | 2
src/Knone.c | 2
src/Perfect.cc | 2
src/areaint.c | 2
src/areapair.c |only
src/badgey.c | 2
src/chunkloop.h | 2
src/closefuns.h | 225 ++++++++++++++----
src/closepair.c | 34 ++
src/connect.c | 13 -
src/corrections.c | 5
src/dgs.c | 2
src/diggra.c | 2
src/dist2.c | 3
src/dist2dpath.h | 2
src/fiksel.c | 2
src/geyer.c | 14 -
src/hardcore.c | 2
src/idw.c | 2
src/knnXdist.h | 10
src/knndist.h | 10
src/knndistance.c | 7
src/knngrid.c |only
src/knngrid.h |only
src/lennard.c | 2
src/lineardisc.c | 15 -
src/localpcf.c | 2
src/loccum.c | 2
src/lookup.c | 2
src/methas.c | 26 +-
src/methas.h | 14 -
src/mhloop.h | 10
src/mhsnoop.c | 6
src/mhsnoop.h | 2
src/mhsnoopdef.h | 2
src/mhv1.h | 4
src/mhv2.h | 4
src/mhv3.h | 4
src/mhv4.h | 4
src/multihard.c | 2
src/nn3Ddist.c | 23 -
src/nnMDdist.c | 23 -
src/nndistance.c | 7
src/pairloop.h | 2
src/sftcr.c | 2
src/sphevol.c | 5
src/straush.c | 2
src/straushm.c | 2
src/strauss.c | 2
src/straussm.c | 2
src/triplets.c | 2
src/veegraf.c |only
src/yesno.h |only
159 files changed, 2269 insertions(+), 1147 deletions(-)
Title: Kernel Factory: An ensemble of kernel Machines
Diff between kernelFactory versions 0.1.1 dated 2013-02-01 and 0.1.2 dated 2013-05-27
Description: Classification based on an ensemble of kernel machines
Author: Michel Ballings, Dirk Van den Poel
Maintainer: Michel Ballings
kernelFactory-0.1.1/kernelFactory/R/kernelFactory-internal.R |only
kernelFactory-0.1.2/kernelFactory/DESCRIPTION | 13 +++++------
kernelFactory-0.1.2/kernelFactory/MD5 | 7 ++---
kernelFactory-0.1.2/kernelFactory/R/kernelFactory.R | 10 +-------
kernelFactory-0.1.2/kernelFactory/inst/NEWS | 7 +++++
5 files changed, 18 insertions(+), 19 deletions(-)
Title: geotopbricks: Analyzes raster maps as input/output files from
the Hydrological Distributed Model GEOtop
Diff between geotopbricks versions 1.2 dated 2012-12-26 and 1.3.3 dated 2013-05-27
Description: geotopbricks: Analyzes raster maps and other information
as input/output files from the Hydrological Distributed Model
GEOtop. It contains functions and methods to import maps and
other keywords from geotop.inpts file. Any information about
the GEOtop Distributed Hydrological Model is available on
www.geotop.org. The examples are tested on two simulation cases
run with GEOtop built 1.225-9 mostly developed by Stefano
Endrizzi. Bugs/comments/questions/collaboration of any kind are
warmly welcomed.
Author: Emanuele Cordano, Daniele Andreis, Fabio Zottele
Maintainer: Emanuele Cordano
geotopbricks-1.2/geotopbricks/LICENSE |only
geotopbricks-1.3.3/geotopbricks/DESCRIPTION | 29 -
geotopbricks-1.3.3/geotopbricks/MD5 | 171 ++++++++--
geotopbricks-1.3.3/geotopbricks/NAMESPACE | 8
geotopbricks-1.3.3/geotopbricks/R/KML.GeotopRasterBrick.R | 8
geotopbricks-1.3.3/geotopbricks/R/aggregate.brick.at.depth.R | 6
geotopbricks-1.3.3/geotopbricks/R/brick.decimal.formatter.R | 23 -
geotopbricks-1.3.3/geotopbricks/R/create.geotop.inpts.keywords.R | 29 +
geotopbricks-1.3.3/geotopbricks/R/declared.geotop.inpts.keywords.R | 10
geotopbricks-1.3.3/geotopbricks/R/geotopbrick_S3.R | 135 +++++++
geotopbricks-1.3.3/geotopbricks/R/geotopbricks-package.R | 4
geotopbricks-1.3.3/geotopbricks/R/get.keyword.value.R | 45 ++
geotopbricks-1.3.3/geotopbricks/R/get.recovery.state.R |only
geotopbricks-1.3.3/geotopbricks/R/read.ascii.vectorizrerd.brick.R | 2
geotopbricks-1.3.3/geotopbricks/R/read.raster.from.asc.url.R | 2
geotopbricks-1.3.3/geotopbricks/R/read.vectorized.geotop.recovery.R |only
geotopbricks-1.3.3/geotopbricks/R/set.recovery.state.R |only
geotopbricks-1.3.3/geotopbricks/R/write.ascii.vectorizrerd.brick.R | 30 -
geotopbricks-1.3.3/geotopbricks/R/write.vectorized.geotop.recovery.R |only
geotopbricks-1.3.3/geotopbricks/R/write.vectorized.variable.in.string.R |only
geotopbricks-1.3.3/geotopbricks/R/writeRasterxgeotop.R | 12
geotopbricks-1.3.3/geotopbricks/data/bondone.rda |binary
geotopbricks-1.3.3/geotopbricks/inst/doc/examples/snowthickness_textfile/template_matlab.txt | 4
geotopbricks-1.3.3/geotopbricks/inst/doc/examples/zz_wtc_33cm_ton_toss.kmz |binary
geotopbricks-1.3.3/geotopbricks/inst/doc/examples/zz_wtc_33cm_ton_toss_legend.pdf |binary
geotopbricks-1.3.3/geotopbricks/inst/template |only
geotopbricks-1.3.3/geotopbricks/man/KML-methods.Rd | 7
geotopbricks-1.3.3/geotopbricks/man/brick.decimal.formatter.Rd | 6
geotopbricks-1.3.3/geotopbricks/man/create.geotop.inpts.keyword.Rd | 20 -
geotopbricks-1.3.3/geotopbricks/man/geotopbrick.Rd | 27 +
geotopbricks-1.3.3/geotopbricks/man/geotopbricks-package.Rd | 4
geotopbricks-1.3.3/geotopbricks/man/get.geotop.inpts.keyword.value.Rd | 18 -
geotopbricks-1.3.3/geotopbricks/man/get.geotop.recovery.state.Rd |only
geotopbricks-1.3.3/geotopbricks/man/read.raster.from.url.Rd | 3
geotopbricks-1.3.3/geotopbricks/man/read.vectorized.geotop.recovery.Rd |only
geotopbricks-1.3.3/geotopbricks/man/set.geotop.recovery.state.Rd |only
geotopbricks-1.3.3/geotopbricks/man/vertical.aggregate.brick.within.depth.Rd | 6
geotopbricks-1.3.3/geotopbricks/man/write.ascii.vectorized.brick.Rd | 30 -
geotopbricks-1.3.3/geotopbricks/man/write.vectorized.geotop.recovery.Rd |only
geotopbricks-1.3.3/geotopbricks/man/write.vectorized.variable.in.string.Rd |only
geotopbricks-1.3.3/geotopbricks/man/writeRasterxGEOtop.Rd | 7
41 files changed, 511 insertions(+), 135 deletions(-)
Title: Elimination-by-Aspects (EBA) Models
Diff between eba versions 1.7-0 dated 2011-09-01 and 1.7-1 dated 2013-05-27
Description: Fitting and testing multi-attribute probabilistic choice
models, especially the Bradley-Terry-Luce (BTL) model (Bradley
& Terry, 1952; Luce, 1959), elimination-by-aspects (EBA) models
(Tversky, 1972), and preference tree (Pretree) models (Tversky
& Sattath, 1979).
Author: Florian Wickelmaier
Maintainer: Florian Wickelmaier
ChangeLog | 11 ++++++++++
DESCRIPTION | 14 ++++++------
MD5 | 51 ++++++++++++++++++++++++-----------------------
NAMESPACE | 7 +++++-
R/EBA_fast.R | 31 +++++++++++-----------------
R/mallows.R | 44 ++++++++++++++++++++++++++--------------
R/strans.R | 32 +++++++++++++++--------------
R/trineq.R |only
data/celebrities.rda |binary
data/drugrisk.rda |binary
data/heaviness.rda |binary
data/pork.rda |binary
data/tartness.rda |binary
man/OptiPt.Rd | 10 +++++----
man/balanced.pcdesign.Rd | 2 -
man/boot.Rd | 2 -
man/circular.Rd | 4 +--
man/drugrisk.Rd | 8 +++----
man/group.test.Rd | 2 -
man/inclusion.rule.Rd |only
man/linear2btl.Rd | 10 ++++-----
man/logLik.eba.Rd | 2 +
man/mbt.Rd | 14 ++++++++----
man/pcX.Rd | 18 ++++++++--------
man/plot.eba.Rd | 4 +--
man/simulate.eba.Rd | 12 +++++------
man/strans.Rd | 13 ++++++-----
man/trineq.Rd |only
28 files changed, 165 insertions(+), 126 deletions(-)