Title: VAR modelling: estimation, testing, and prediction
Diff between VAR.etp versions 0.1 dated 2014-04-14 and 0.2 dated 2014-04-16
Description: Estimation, Hypothesis Testing, Prediction for Stationary Vector Autoregressive Models
Author: Jae. H. Kim
Maintainer: Jae H. Kim
DESCRIPTION | 8 ++++----
MD5 | 24 +++++++++++++-----------
R/VAR.LRtest.R | 6 +++---
R/VAR.Rest.R | 2 +-
R/VAR1.sim.R |only
R/coverage.R |only
man/VAR.BPR.Rd | 5 ++++-
man/VAR.BaBPR.Rd | 5 ++++-
man/VAR.LRtest.Rd | 4 ++--
man/VAR.Rest.Rd | 4 ++--
man/VAR.Waldtest.Rd | 2 +-
man/VAR.est.Rd | 4 ++--
man/VAR.etp-package.Rd | 4 ++--
man/dat.Rd | 2 +-
14 files changed, 39 insertions(+), 31 deletions(-)
Title: R and C++11
Diff between Rcpp11 versions 3.1.0 dated 2014-04-11 and 3.1.0.1 dated 2014-04-16
Description: Rcpp11 includes a header only C++11 library that facilitates
integration between R and modern C++.
Author: Romain Francois [aut, cre],
Kevin Ushey [aut],
John Chambers [ctb]
Maintainer: Romain Francois
DESCRIPTION | 11 +-
MD5 | 87 +++++++++++------------
inst/include/Rcpp.h | 28 +++----
inst/include/Rcpp/Array.h | 23 ++----
inst/include/Rcpp/Context.h | 86 +++++++++++++++++++++-
inst/include/Rcpp/DataFrame.h | 15 ++-
inst/include/Rcpp/Language.h | 6 -
inst/include/Rcpp/NA_Proxy.h | 2
inst/include/Rcpp/Pairlist.h | 8 +-
inst/include/Rcpp/R.h | 56 --------------
inst/include/Rcpp/Reference.h | 4 -
inst/include/Rcpp/Timer.h | 8 +-
inst/include/Rcpp/exceptions.h | 34 ++++++--
inst/include/Rcpp/macros/interface.h | 2
inst/include/Rcpp/macros/macros.h | 3
inst/include/Rcpp/platform.h |only
inst/include/Rcpp/stats/dpq/dpq.h | 24 +++---
inst/include/Rcpp/sugar/functions/complex.h | 2
inst/include/Rcpp/sugar/functions/duplicated.h | 2
inst/include/Rcpp/sugar/functions/is_nan.h | 2
inst/include/Rcpp/sugar/functions/match.h | 2
inst/include/Rcpp/sugar/functions/sapply.h | 2
inst/include/Rcpp/sugar/functions/unique.h | 4 -
inst/include/Rcpp/sugar/matrix/outer.h | 2
inst/include/Rcpp/sugar/tools/iterator.h | 18 ++--
inst/include/Rcpp/traits/is_materialized.h | 2
inst/include/Rcpp/traits/is_matrix_expression.h | 13 +--
inst/include/Rcpp/traits/is_vector_expression.h | 4 -
inst/include/Rcpp/traits/named_object.h | 4 -
inst/include/Rcpp/transient_vector.h | 4 -
inst/include/Rcpp/vector/Matrix.h | 19 ++---
inst/include/Rcpp/vector/MatrixBase.h | 2
inst/include/Rcpp/vector/MatrixColumn.h | 8 +-
inst/include/Rcpp/vector/MatrixRow.h | 8 +-
inst/include/Rcpp/vector/StrideIterator.h | 12 +--
inst/include/Rcpp/vector/VectorBase.h | 4 -
inst/include/Rcpp/vector/impl/CharacterVector.h | 45 +++++++----
inst/include/Rcpp/vector/impl/ExpressionVector.h | 51 +++++++------
inst/include/Rcpp/vector/impl/List.h | 32 +++++---
inst/include/Rcpp/vector/impl/SimpleVector.h | 40 ++++++----
inst/include/Rcpp/vector/is_materialized.h | 4 -
inst/include/Rcpp/vector/name_proxy.h | 2
inst/include/Rcpp/wrap/EnumWrapper.h | 14 +--
inst/include/Rcpp/wrap/range_wrap.h | 8 +-
inst/include/Rcpp/wrap/wrap_type.h | 4 -
45 files changed, 395 insertions(+), 316 deletions(-)
Title: A swiss army knife for population genetic & genomic analysis
Diff between PopGenome versions 2.0.5 dated 2014-03-12 and 2.0.6 dated 2014-04-16
Description: PopGenome is an R-package for Population Genetic & Genomic Analysis
Author: Bastian Pfeifer, Ulrich Wittelsbuerger
Maintainer: Bastian Pfeifer
PopGenome-2.0.5/PopGenome/src/zlib.h |only
PopGenome-2.0.6/PopGenome/DESCRIPTION | 6 +-
PopGenome-2.0.6/PopGenome/MD5 | 27 ++++------
PopGenome-2.0.6/PopGenome/NEWS | 12 ++++
PopGenome-2.0.6/PopGenome/R/GENOME.R | 7 +-
PopGenome-2.0.6/PopGenome/R/parse_gff.R | 8 ++
PopGenome-2.0.6/PopGenome/R/readData.R | 5 +
PopGenome-2.0.6/PopGenome/inst/doc/An_introduction_to_the_PopGenome_package.Rnw | 3 -
PopGenome-2.0.6/PopGenome/inst/doc/An_introduction_to_the_PopGenome_package.pdf |binary
PopGenome-2.0.6/PopGenome/inst/doc/Integration_of_new_Methods.pdf |binary
PopGenome-2.0.6/PopGenome/man/Whop_readVCF.Rd | 2
PopGenome-2.0.6/PopGenome/man/readData.Rd | 11 ++--
PopGenome-2.0.6/PopGenome/man/readSNP.Rd | 2
PopGenome-2.0.6/PopGenome/man/readVCF.Rd | 2
PopGenome-2.0.6/PopGenome/vignettes/An_introduction_to_the_PopGenome_package.Rnw | 3 -
15 files changed, 62 insertions(+), 26 deletions(-)
Title: Creates Random Forest and Stochastic Gradient Boosting Models,
and applies them to GIS .img files to build detailed prediction
maps.
Diff between ModelMap versions 3.0.14 dated 2014-03-01 and 3.0.15 dated 2014-04-16
Description: This package will create sophisticated models of training data and validate the models with an independent test set, cross validation, or in the case of Random Forest Models, with Out Of Bag (OOB) predictions on the training data. It will create graphs and tables of the model validation results. It will apply these models to GIS .img files of predictors to create detailed prediction surfaces. It will handle large predictor files for map making, by reading in the .img files in chunks, and output to the .txt file the prediction for each data chunk, before reading the next chunk of data.
Author: Elizabeth Freeman, Tracey Frescino
Maintainer: Elizabeth Freeman
DESCRIPTION | 8 +-
MD5 | 28 ++++-----
R/internal.R | 135 +++++++++++++++++++++++++++++++++++++----------
R/model.build.R | 66 ++++++++++++++++------
R/model.diagnostics.R | 70 ++++++++++++++++--------
R/model.mapmake.R | 28 ++++++++-
build/vignette.rds |binary
inst/CHANGELOG | 30 ++++++++++
inst/README | 66 ++++++++++++++++++----
inst/doc/VModelMap.pdf |binary
man/ModelMap-package.Rd | 4 -
man/internal.Rd | 1
man/model.build.Rd | 2
man/model.diagnostics.Rd | 2
man/model.mapmake.Rd | 4 +
15 files changed, 333 insertions(+), 111 deletions(-)
Title: Visualisation of sequential probability distributions using fan
charts.
Diff between fanplot versions 3.1 dated 2014-03-21 and 3.2 dated 2014-04-16
Description: Visualise sequential distributions using a range of plotting styles. Sequential distribution data can be input as either simulations or values corresponding to percentiles over time (columns). Plots are added to existing graphic devices using the fan function. Users can choose from four different styles, including fan chart type plots, where a set of coloured polygon, with shadings corresponding to the percentile values are layered to represent different uncertainty levels.
Author: Guy J. Abel
Maintainer: "Guy J. Abel"
DESCRIPTION | 6 -
MD5 | 21 ++--
R/fan.R | 264 ++++++++++++++++++++++++++++++---------------------
R/fanplot-internal.R | 251 ++++++++++++++++++++++++------------------------
data/boe.rda |binary
data/cpi.rda |binary
data/ips.rda |binary
data/th.mcmc.rda |binary
demo |only
inst/netelicit |only
man/fan.Rd | 122 +++++++++++------------
11 files changed, 355 insertions(+), 309 deletions(-)
Title: Constrained Generalized Additive Model
Diff between cgam versions 1.0 dated 2014-03-05 and 1.1 dated 2014-04-16
Description: In this package, a constrained generalized additive model is fitted by the cgam routine. Given a set of predictors with or without shape or order restrictions, the maximum likelihood estimator for the constrained generalized additive model is found using an iteratively re-weighted cone projection algorithm. The cone information criterion (CIC) is used to select the best combination of variables and shapes. This package depends on the R package coneproj, in which the hinge algorithm for one cone projection is effected.
Author: Mary C. Meyer and Xiyue Liao
Maintainer: Xiyue Liao
DESCRIPTION | 10
MD5 | 6
R/cgam.R | 694 +++++++++++++++++++++++++++++++-----------------------------
man/cgam.Rd | 21 +
4 files changed, 387 insertions(+), 344 deletions(-)
Title: An R interface to SciDB
Diff between scidb versions 1.1-1 dated 2014-01-25 and 1.1-2 dated 2014-04-16
Description: SciDB is an open-source array database (http://scidb.org). The scidb package provides an R interface to SciDB.
Author: Paradigm4, B. W. Lewis
Maintainer: B. W. Lewis
scidb-1.1-1/scidb/man/misc-methods.Rd |only
scidb-1.1-2/scidb/.Rinstignore | 1
scidb-1.1-2/scidb/DESCRIPTION | 13
scidb-1.1-2/scidb/MD5 | 127 ++--
scidb-1.1-2/scidb/NAMESPACE | 33 +
scidb-1.1-2/scidb/NEWS | 42 +
scidb-1.1-2/scidb/R/aggregate.R | 153 +++--
scidb-1.1-2/scidb/R/classes.R | 85 +-
scidb-1.1-2/scidb/R/dbops.R | 453 +++++++++------
scidb-1.1-2/scidb/R/distributions.R |only
scidb-1.1-2/scidb/R/glm.R | 358 +++++++++++-
scidb-1.1-2/scidb/R/merge.R |only
scidb-1.1-2/scidb/R/misc.R |only
scidb-1.1-2/scidb/R/pkg.R | 115 +++
scidb-1.1-2/scidb/R/schema-utils.R |only
scidb-1.1-2/scidb/R/scidb-arithmetic.R | 457 +++++++++------
scidb-1.1-2/scidb/R/scidb-functions.R | 190 +++---
scidb-1.1-2/scidb/R/scidb-indexing-functions.R | 321 +++++++----
scidb-1.1-2/scidb/R/scidb-methods.R | 355 ++++++++----
scidb-1.1-2/scidb/R/scidbdf-functions.R | 145 ++---
scidb-1.1-2/scidb/R/scidbdf-methods.R | 176 ++++--
scidb-1.1-2/scidb/R/utility.R | 696 ++++++++++++------------
scidb-1.1-2/scidb/README | 6
scidb-1.1-2/scidb/README.md | 43 +
scidb-1.1-2/scidb/inst/doc/scidb.Rnw | 296 ++++++----
scidb-1.1-2/scidb/inst/doc/scidb.pdf |binary
scidb-1.1-2/scidb/inst/misc-documentation |only
scidb-1.1-2/scidb/inst/misc/log |only
scidb-1.1-2/scidb/man/Ops.scidb.Rd | 8
scidb-1.1-2/scidb/man/aggregate-methods.Rd | 27
scidb-1.1-2/scidb/man/all.equal.Rd |only
scidb-1.1-2/scidb/man/antijoin.Rd |only
scidb-1.1-2/scidb/man/attribute_rename.Rd | 6
scidb-1.1-2/scidb/man/build.Rd | 2
scidb-1.1-2/scidb/man/c-methods.Rd |only
scidb-1.1-2/scidb/man/cast.Rd | 6
scidb-1.1-2/scidb/man/comparison-methods.Rd |only
scidb-1.1-2/scidb/man/diff.scidb.Rd | 2
scidb-1.1-2/scidb/man/dimension_rename.Rd |only
scidb-1.1-2/scidb/man/dimensions.Rd |only
scidb-1.1-2/scidb/man/glm.fit.Rd | 83 ++
scidb-1.1-2/scidb/man/grand-methods.Rd |only
scidb-1.1-2/scidb/man/hist-method.Rd |only
scidb-1.1-2/scidb/man/hypergeometric-methods.Rd |only
scidb-1.1-2/scidb/man/index_lookup.Rd | 4
scidb-1.1-2/scidb/man/iquery.Rd | 2
scidb-1.1-2/scidb/man/lag.Rd | 2
scidb-1.1-2/scidb/man/merge-methods.Rd | 44 -
scidb-1.1-2/scidb/man/na.locf-method.Rd |only
scidb-1.1-2/scidb/man/persist.Rd |only
scidb-1.1-2/scidb/man/predict.glm_scidb.Rd |only
scidb-1.1-2/scidb/man/quantile.Rd |only
scidb-1.1-2/scidb/man/redimension.Rd | 48 +
scidb-1.1-2/scidb/man/repart.Rd | 5
scidb-1.1-2/scidb/man/reshape-method.Rd | 19
scidb-1.1-2/scidb/man/schema.Rd |only
scidb-1.1-2/scidb/man/scidb-class.Rd | 21
scidb-1.1-2/scidb/man/scidb.Rd | 10
scidb-1.1-2/scidb/man/scidb_attributes.Rd |only
scidb-1.1-2/scidb/man/scidb_fisher.test.Rd |only
scidb-1.1-2/scidb/man/scidbconnect.Rd | 4
scidb-1.1-2/scidb/man/scidbdf-class.Rd | 15
scidb-1.1-2/scidb/man/scidbremove.Rd | 56 +
scidb-1.1-2/scidb/man/show_commit_log.Rd |only
scidb-1.1-2/scidb/man/slice.Rd | 6
scidb-1.1-2/scidb/man/sort-methods.Rd | 3
scidb-1.1-2/scidb/man/subarray.Rd |only
scidb-1.1-2/scidb/man/subset-methods.Rd | 3
scidb-1.1-2/scidb/man/substitute.Rd |only
scidb-1.1-2/scidb/man/summary.scidb.Rd | 4
scidb-1.1-2/scidb/man/sweep-methods.Rd |only
scidb-1.1-2/scidb/src/scidb.c | 197 ++++++
scidb-1.1-2/scidb/tests/scidb.R | 100 +++
scidb-1.1-2/scidb/tests/scidbdf.R | 15
scidb-1.1-2/scidb/vignettes/scidb.Rnw | 296 ++++++----
75 files changed, 3396 insertions(+), 1657 deletions(-)
Title: Adaptive, sine-multitaper power spectral density estimation
Diff between psd versions 0.4-0 dated 2013-09-20 and 0.4-1 dated 2014-04-16
Description: Power spectral density estimates
are produced through iterative refinement of the
optimal number of sine-tapers at each frequency.
The optimization procedure is based on the
method of Riedel and Sidorenko (1995), which applies
smoothing that varies with frequency to minimize the sum
of variance and bias at each point.
Author: Robert L. Parker and Andrew J. Barbour
Maintainer: Andrew J. Barbour
DESCRIPTION | 15 +--
MD5 | 72 +++++++-------
build/vignette.rds |binary
data/Tohoku.rda |binary
data/hfsnm.rda |binary
data/magnet.rda |binary
inst/CITATION | 18 ++-
inst/Examples/rdex_pspectrum.R | 2
inst/NEWS.Rd | 14 ++
inst/doc/fftw.R | 18 +--
inst/doc/fftw.pdf |binary
inst/doc/normalization.R | 40 ++++----
inst/doc/normalization.Rnw | 24 ++--
inst/doc/normalization.pdf |binary
inst/doc/psd_overview.R | 74 +++++++--------
inst/doc/psd_overview.pdf |binary
man/Tohoku.Rd | 58 ++++++------
man/as.tapers.Rd | 78 +++++++---------
man/hfsnm.Rd | 30 +++---
man/magnet.Rd | 41 ++++----
man/parabolic_weights.Rd | 43 ++++----
man/pilot_spec.Rd | 58 +++++-------
man/prewhiten.Rd | 189 ++++++++++++++++++---------------------
man/psd-environment.Rd | 97 +++++++++-----------
man/psd-normalization.Rd | 61 +++++-------
man/psd-package.Rd | 154 ++++++++++++++++----------------
man/psd-utilities.Rd | 197 ++++++++++++++++++++---------------------
man/psdcore.Rd | 95 +++++++++----------
man/pspectrum.Rd | 56 +++++------
man/riedsid.Rd | 94 +++++++++----------
man/spec-methods.Rd | 24 ++--
man/spec_confint.Rd | 70 ++++++--------
man/spectral_properties.Rd | 49 ++++------
man/splineGrad.Rd | 32 +++---
man/tapers-constraints.Rd | 102 ++++++++++-----------
man/tapers-methods.Rd | 31 +++---
vignettes/normalization.Rnw | 24 ++--
37 files changed, 917 insertions(+), 943 deletions(-)
Title: Multi-species sIZE spectrum modelling in R
Diff between mizer versions 0.1 dated 2013-10-08 and 0.2 dated 2014-04-16
Description: A set of classes and methods to set up and run multispecies, trait
based and community size spectrum ecological models, focussed on the marine
environment.
Author: Finlay Scott (JRC, IT) and Julia Blanchard (Sheffield University, UK)
and Ken Andersen (DTU Aqua, Copenhagen, DK)
Maintainer: Finlay Scott
mizer-0.1/mizer/vignettes/Growth_curve-eps-converted-to.pdf |only
mizer-0.1/mizer/vignettes/Growth_curve.eps |only
mizer-0.1/mizer/vignettes/Spectrum-eps-converted-to.pdf |only
mizer-0.1/mizer/vignettes/mizer_vignette-plotSpectra_community_model.pdf |only
mizer-0.1/mizer/vignettes/recruitment-eps-converted-to.pdf |only
mizer-0.1/mizer/vignettes/recruitment.eps |only
mizer-0.2/mizer/DESCRIPTION | 6
mizer-0.2/mizer/MD5 | 37 +--
mizer-0.2/mizer/NEWS | 8
mizer-0.2/mizer/R/project.r | 6
mizer-0.2/mizer/R/wrapper_functions.R | 41 ++-
mizer-0.2/mizer/data/NS_species_params.RData |binary
mizer-0.2/mizer/data/NS_species_params_gears.RData |binary
mizer-0.2/mizer/inst/doc/NS_species_params.csv | 6
mizer-0.2/mizer/inst/doc/mizer_vignette.R | 67 ++---
mizer-0.2/mizer/inst/doc/mizer_vignette.Rnw | 116 +++++-----
mizer-0.2/mizer/inst/doc/mizer_vignette.pdf |binary
mizer-0.2/mizer/inst/examples |only
mizer-0.2/mizer/man/set_community_model.Rd | 32 +-
mizer-0.2/mizer/man/set_trait_model.Rd | 18 -
mizer-0.2/mizer/vignettes/Growth_curve.pdf |only
mizer-0.2/mizer/vignettes/NS_species_params.csv | 6
mizer-0.2/mizer/vignettes/mizer_vignette.Rnw | 116 +++++-----
mizer-0.2/mizer/vignettes/recruitment.pdf |only
24 files changed, 249 insertions(+), 210 deletions(-)
Title: Hybrid simulation and genome scan for dominant markers
Diff between AFLPsim versions 0.2-2 dated 2013-10-29 and 0.3-3 dated 2014-04-16
Description: This package is developed in the Plant Reproductive Biology Lab (RNM-214) - University of Seville. It contains hybrid simulation functions for dominant genetic data. It also provides several genome scan methods.
Author: Francisco Balao [aut, cre],
Juan Luis García-Castaño [aut]
Maintainer: Francisco Balao
DESCRIPTION | 8 +++----
MD5 | 19 +++++++++--------
R/gscan.R | 6 ++---
R/hybridsim.R | 49 +++++++++-------------------------------------
R/plot.hybridsim.R | 9 ++++----
README.md |only
inst/NEWS.Rd | 7 ++++++
man/AFLPsim-package.Rd | 8 +++----
man/hybridize.Rd | 2 -
man/hybridsim.Rd | 4 +--
man/plot.demosimhybrid.Rd | 2 -
11 files changed, 47 insertions(+), 67 deletions(-)
Title: Graphical Reporting for Clinical Trials
Diff between greport versions 0.5-0 dated 2014-03-02 and 0.5-1 dated 2014-04-16
Description: The greport package contains many functions useful for
monitoring and reporting the results of clinical trials and other
experiments in which treatments are compared. LaTeX is
used to typeset the resulting reports, recommended to be in the
context of knitr. The Hmisc and lattice packages are used by greport
for high-level graphics.
Author: Frank E Harrell Jr
Maintainer: Frank E Harrell Jr
DESCRIPTION | 12 +--
INDEX | 4 -
MD5 | 43 ++++++-----
NAMESPACE | 19 +++--
NEWS | 18 ++++
R/Misc.r | 50 +++++++++----
R/accrualReport.r | 53 ++++++++++++--
R/dReport.r | 29 ++++++--
R/eReport.r | 4 -
R/exReport.r | 173 ++++++++++++++++++++++++++++--------------------
R/greport-package.r |only
R/nriskReport.r |only
R/survReport.r | 40 ++---------
README.md | 21 +++++
inst/feh.bib |only
man/Merge.Rd | 48 ++++++++-----
man/accrualReport.Rd | 11 ++-
man/exReport.Rd | 24 +++++-
man/greport.Rd |only
man/nriskReport.Rd |only
man/setgreportOption.Rd | 6 +
man/startPlot.Rd | 2
man/survReport.Rd | 4 -
tests/report.Rnw | 26 +++----
tests/test.Rnw | 35 +++++----
25 files changed, 399 insertions(+), 223 deletions(-)
Title: Update and manipulate Rd documentation objects
Diff between Rdpack versions 0.4-4 dated 2013-04-13 and 0.4-14 dated 2014-04-16
Description: Functions for manipulation of Rd objects, including function
reprompt for updating existing Rd documentation for
functions, methods and classes, and function rebib for
import of references from Bibtex files.
Author: Georgi N. Boshnakov
Maintainer: Georgi N. Boshnakov
Rdpack-0.4-14/Rdpack/DESCRIPTION | 19 +-
Rdpack-0.4-14/Rdpack/MD5 | 84 ++++++-----
Rdpack-0.4-14/Rdpack/NAMESPACE | 110 ++++++++++++++-
Rdpack-0.4-14/Rdpack/NEWS | 33 ++++
Rdpack-0.4-14/Rdpack/R/Rdo2Rdf.R | 9 -
Rdpack-0.4-14/Rdpack/R/alias.R | 2
Rdpack-0.4-14/Rdpack/R/bib.R | 11 -
Rdpack-0.4-14/Rdpack/R/inspect.R | 10 -
Rdpack-0.4-14/Rdpack/R/manip.R | 45 ++++--
Rdpack-0.4-14/Rdpack/R/parse.R | 2
Rdpack-0.4-14/Rdpack/R/repromptAny.R | 5
Rdpack-0.4-14/Rdpack/R/sections.R | 6
Rdpack-0.4-14/Rdpack/R/threedots.R |only
Rdpack-0.4-14/Rdpack/R/usage.R | 10 +
Rdpack-0.4-14/Rdpack/R/utils.R | 9 -
Rdpack-0.4-14/Rdpack/R/yytransient.R |only
Rdpack-0.4-14/Rdpack/R/zzobsolete.R | 71 +++++++++
Rdpack-0.4-14/Rdpack/build/partial.rdb |binary
Rdpack-0.4-14/Rdpack/man/Rd_combo.Rd | 10 -
Rdpack-0.4-14/Rdpack/man/Rdo_collect_metadata.Rd |only
Rdpack-0.4-14/Rdpack/man/Rdo_empty_sections.Rd | 2
Rdpack-0.4-14/Rdpack/man/Rdo_get_argument_names.Rd |only
Rdpack-0.4-14/Rdpack/man/Rdo_get_item_labels.Rd |only
Rdpack-0.4-14/Rdpack/man/Rdo_locate.Rd | 48 ++++--
Rdpack-0.4-14/Rdpack/man/Rdo_locate_leaves.Rd | 9 -
Rdpack-0.4-14/Rdpack/man/Rdo_sections.Rd | 47 +++++-
Rdpack-0.4-14/Rdpack/man/Rdo_tags.Rd |only
Rdpack-0.4-14/Rdpack/man/Rdo_which.Rd |only
Rdpack-0.4-14/Rdpack/man/Rdpack-package.Rd | 66 ++++-----
Rdpack-0.4-14/Rdpack/man/Rdreplace_section.Rd |only
Rdpack-0.4-14/Rdpack/man/c_Rd.Rd | 20 +-
Rdpack-0.4-14/Rdpack/man/compare_usage1.Rd | 4
Rdpack-0.4-14/Rdpack/man/deparse_usage.Rd | 2
Rdpack-0.4-14/Rdpack/man/format_funusage.Rd | 2
Rdpack-0.4-14/Rdpack/man/get_sig_text.Rd | 2
Rdpack-0.4-14/Rdpack/man/get_usage_text.Rd | 2
Rdpack-0.4-14/Rdpack/man/inspect_args.Rd | 2
Rdpack-0.4-14/Rdpack/man/inspect_signatures.Rd | 3
Rdpack-0.4-14/Rdpack/man/inspect_slots.Rd | 3
Rdpack-0.4-14/Rdpack/man/inspect_usage.Rd | 2
Rdpack-0.4-14/Rdpack/man/parse_usage_text.Rd | 2
Rdpack-0.4-14/Rdpack/man/predefined.Rd | 38 ++++-
Rdpack-0.4-14/Rdpack/man/promptPackageSexpr.Rd | 1
Rdpack-0.4-14/Rdpack/man/rebib.Rd | 19 +-
Rdpack-0.4-14/Rdpack/man/reprompt.Rd | 1
Rdpack-0.4-14/Rdpack/man/update_aliases_tmp.Rd | 2
Rdpack-0.4-4/Rdpack/man/Rdo_collect_aliases.Rd |only
Rdpack-0.4-4/Rdpack/man/Rdo_locate_predefined_section.Rd |only
48 files changed, 526 insertions(+), 187 deletions(-)