Title: Produces summary tables and exports them to multi-tab
spreadsheet format (.xls or .xlsx)
Diff between table1xls versions 0.3 dated 2014-04-05 and 0.3.1 dated 2014-06-13
Description: A collection of convenience wrappers for producing and exporting various commonly-used numerical table types to .xls/.xlsx multi-tab spreadsheets while controlling spreadsheet position and layout, via XLConnect functionality.
Author: Assaf P. Oron
Maintainer: Assaf P. Oron
DESCRIPTION | 17 +++-----
MD5 | 39 +++++++++---------
NAMESPACE | 1
NEWS | 18 ++++++++
R/XLgeneric.r | 35 ++++++++++++----
R/XLoneWay.r | 24 +++++++----
R/exploratoryUtils.r | 89 +++++++++++++++++++++++++------------------
R/regressionSummaries.r | 51 +++++++++++++++---------
R/utilities.r | 48 +++++++++++++++++++++--
inst/examples/Ex1way.r | 4 +
inst/examples/Ex2way.r | 6 +-
inst/examples/ExGeneric.r | 21 +++++++++-
inst/examples/ExRegress.r | 28 +++++++++----
man/XLaddText.Rd |only
man/XLgeneric.Rd | 54 ++++++++++++++++++--------
man/XLoneWay.Rd | 32 ++++++++-------
man/XLregresSummary.Rd | 95 ++++++++++++++++++++++++++++++----------------
man/XLtwoWay.Rd | 75 +++++++++++++++++++-----------------
man/XLuniVariate.Rd | 38 ++++++++----------
man/XLwriteOpen.Rd | 18 ++++----
man/table1xls-package.Rd | 22 +++++++---
21 files changed, 463 insertions(+), 252 deletions(-)
Title: File System Utility Functions for NeuroAnatomy Toolbox
Diff between nat.utils versions 0.4 dated 2014-03-20 and 0.4.1 dated 2014-06-13
Description: Utility functions to support the NeuroAnatomy Toolbox (nat).
Includes functions to provide a basic make style system to update files
based on timestamp information, file locking and other convenience functions
for working with the filesystem.
Author: Gregory Jefferis
Maintainer: Gregory Jefferis
DESCRIPTION | 8 +++----
MD5 | 37 ++++++++++++++++++-----------------
NAMESPACE | 2 +
NEWS | 7 ++++++
R/gziputils.r | 22 +++++++++++++++++++++
R/make.r | 7 +++++-
inst/tests/test-gziputils.r | 16 +++++++++++++++
inst/tests/test-make.r | 9 +++++++-
man/RunCmdForNewerInput.Rd | 46 +++++++++++++++++++-------------------------
man/abs2rel.Rd | 8 +++----
man/file.hardlink.Rd | 10 ++++-----
man/file.swap.Rd | 6 ++---
man/gzip.crc.Rd | 7 +++---
man/is.gzip.Rd |only
man/makelock.Rd | 25 ++++++++++-------------
man/nat.utils.Rd | 10 ++++-----
man/ncpus.Rd | 4 +--
man/touch.Rd | 18 +++++++----------
man/zipinfo.Rd | 6 ++---
man/zipok.Rd | 5 ++--
20 files changed, 152 insertions(+), 101 deletions(-)
Title: Ribosome profiling data analysis
Diff between babel versions 0.2-5 dated 2014-01-13 and 0.2-6 dated 2014-06-13
Description: Implements babel routines for identifying unusual ribosome protected fragment counts given mRNA counts
Author: Adam B. Olshen, Richard A. Olshen, Barry S. Taylor
Maintainer: Adam B. Olshen
DESCRIPTION | 13 +++++--------
MD5 | 18 +++++++++---------
NEWS | 5 +++++
R/babel.R | 46 +++++++++++++++++++++++-----------------------
build/vignette.rds |binary
data/ribo.prof.rda |binary
inst/doc/babel.R | 20 ++++++++++----------
inst/doc/babel.pdf |binary
inst/doc/babel.tex.rsp | 20 ++++++++++----------
vignettes/babel.tex.rsp | 20 ++++++++++----------
10 files changed, 72 insertions(+), 70 deletions(-)
Title: Patient Rule Induction Method (PRIM)
Diff between prim versions 1.0.13 dated 2013-12-10 and 1.0.14 dated 2014-06-13
Description: PRIM for bump hunting in high-dimensional data
Author: Tarn Duong
Maintainer: Tarn Duong
DESCRIPTION | 8 ++++----
MD5 | 19 ++++++++++---------
build |only
inst/doc/prim-2d.R | 18 +++++++++---------
inst/doc/prim-2d.Rnw | 3 +--
inst/doc/prim-2d.pdf |binary
inst/doc/prim-3d.R | 18 +++++++++---------
inst/doc/prim-3d.Rnw | 5 ++---
inst/doc/prim-3d.pdf |binary
vignettes/prim-2d.Rnw | 3 +--
vignettes/prim-3d.Rnw | 5 ++---
11 files changed, 38 insertions(+), 41 deletions(-)
Title: Set of common tools for model diagnostics.
Diff between s2dverification versions 2.1 dated 2014-05-19 and 2.1.1 dated 2014-06-13
More information about s2dverification at CRAN
Description: Set of tools to assess the performance of a model through the computation of typical prediction scores against one or more observational datasets or reanalyses (a reanalysis being a physical extrapolation of observations that relies on the equations from a model, not a pure observational dataset).
Author: Nicolau Manubens Gil
Maintainer: Nicolau Manubens
DESCRIPTION | 8 ++++----
MD5 | 10 +++++-----
R/Clim.R | 32 +++++++++++++++-----------------
R/Season.R | 2 +-
man/Filter.Rd | 23 +++++++++++------------
man/Spectrum.Rd | 23 +++++++++++------------
6 files changed, 47 insertions(+), 51 deletions(-)
Permanent link
Title: Response Probability Functions
Diff between rpf versions 0.28 dated 2014-04-03 and 0.30 dated 2014-06-13
Description: The purpose of this package is to factor out logic and math common
to Item Factor Analysis fitting, diagnostics, and analysis. It is
envisioned as core support code suitable for more specialized IRT packages
to build upon. Complete access to optimized C functions are made available
with R_RegisterCCallable.
Author: Joshua Pritikin [cre, aut],
Jonathan Weeks [ctb],
Li Cai [ctb],
Carrie Houts [ctb],
Phil Chalmers [ctb]
Maintainer: Joshua Pritikin
rpf-0.28/rpf/README |only
rpf-0.28/rpf/configure |only
rpf-0.28/rpf/inst/doc/flexmirt-plots.Rnw |only
rpf-0.28/rpf/inst/doc/flexmirt-plots.pdf |only
rpf-0.28/rpf/man/chen.thissen.1997.Rd |only
rpf-0.28/rpf/man/rpf.ot2000.chisq.Rd |only
rpf-0.28/rpf/man/rpf.ot2000.chisq1.Rd |only
rpf-0.28/rpf/man/unpack.2tier.Rd |only
rpf-0.28/rpf/src/Makevars.in |only
rpf-0.28/rpf/src/diagnose.c |only
rpf-0.28/rpf/src/glue.c |only
rpf-0.28/rpf/src/libifa-rpf.c |only
rpf-0.28/rpf/vignettes/Makefile |only
rpf-0.28/rpf/vignettes/flexmirt-plots.Rnw |only
rpf-0.30/rpf/DESCRIPTION | 8
rpf-0.30/rpf/MD5 | 392 +++++++++++++++++++++----
rpf-0.30/rpf/NAMESPACE | 16 -
rpf-0.30/rpf/R/classes.R | 3
rpf-0.30/rpf/R/diagnose.R | 459 +++++++++++++++++++++---------
rpf-0.30/rpf/R/sample.R | 73 ++--
rpf-0.30/rpf/R/util.R | 185 ++++++++++--
rpf-0.30/rpf/README.md |only
rpf-0.30/rpf/build/vignette.rds |binary
rpf-0.30/rpf/inst/doc/diagnostics.R |only
rpf-0.30/rpf/inst/doc/diagnostics.Rmd |only
rpf-0.30/rpf/inst/doc/diagnostics.html |only
rpf-0.30/rpf/inst/doc/flexmirt-plots.R | 10
rpf-0.30/rpf/inst/doc/flexmirt-plots.Rmd |only
rpf-0.30/rpf/inst/doc/flexmirt-plots.html |only
rpf-0.30/rpf/inst/tests/test-fit.R | 102 ++++++
rpf-0.30/rpf/inst/tests/test-ld.R | 87 +++++
rpf-0.30/rpf/inst/tests/test-ptw2011.R | 67 ++--
rpf-0.30/rpf/inst/tests/test-sample.R | 52 ---
rpf-0.30/rpf/inst/tests/test-sumscore.R |only
rpf-0.30/rpf/man/ChenThissen1997.Rd |only
rpf-0.30/rpf/man/SitemFit.Rd |only
rpf-0.30/rpf/man/SitemFit1.Rd |only
rpf-0.30/rpf/man/crosstabTest.Rd |only
rpf-0.30/rpf/man/itemOutcomeBySumScore.Rd |only
rpf-0.30/rpf/man/kct.Rd | 5
rpf-0.30/rpf/man/logit.Rd | 7
rpf-0.30/rpf/man/observedSumScore.Rd |only
rpf-0.30/rpf/man/ordinal.gamma.Rd | 6
rpf-0.30/rpf/man/ptw2011.gof.test.Rd | 35 +-
rpf-0.30/rpf/man/read.flexmirt.Rd | 6
rpf-0.30/rpf/man/rpf.1dim-class.Rd | 4
rpf-0.30/rpf/man/rpf.1dim.drm-class.Rd | 1
rpf-0.30/rpf/man/rpf.1dim.fit.Rd | 50 +--
rpf-0.30/rpf/man/rpf.1dim.graded-class.Rd | 5
rpf-0.30/rpf/man/rpf.1dim.grm-class.Rd | 1
rpf-0.30/rpf/man/rpf.1dim.moment.Rd | 12
rpf-0.30/rpf/man/rpf.1dim.residual.Rd | 9
rpf-0.30/rpf/man/rpf.1dim.stdresidual.Rd | 9
rpf-0.30/rpf/man/rpf.base-class.Rd | 1
rpf-0.30/rpf/man/rpf.dLL.Rd | 20 -
rpf-0.30/rpf/man/rpf.dTheta.Rd | 13
rpf-0.30/rpf/man/rpf.drm.Rd | 34 +-
rpf-0.30/rpf/man/rpf.grm.Rd | 46 +--
rpf-0.30/rpf/man/rpf.id_of.Rd | 3
rpf-0.30/rpf/man/rpf.info.Rd | 18 -
rpf-0.30/rpf/man/rpf.introduction.Rd | 68 ++--
rpf-0.30/rpf/man/rpf.logprob.Rd | 19 -
rpf-0.30/rpf/man/rpf.mcm.Rd | 7
rpf-0.30/rpf/man/rpf.mdim-class.Rd | 4
rpf-0.30/rpf/man/rpf.mdim.drm-class.Rd | 4
rpf-0.30/rpf/man/rpf.mdim.graded-class.Rd | 5
rpf-0.30/rpf/man/rpf.mdim.grm-class.Rd | 1
rpf-0.30/rpf/man/rpf.mdim.mcm-class.Rd | 6
rpf-0.30/rpf/man/rpf.mdim.nrm-class.Rd | 1
rpf-0.30/rpf/man/rpf.mean.info.Rd | 16 -
rpf-0.30/rpf/man/rpf.mean.info1.Rd | 8
rpf-0.30/rpf/man/rpf.modify.Rd | 8
rpf-0.30/rpf/man/rpf.nrm.Rd | 44 +-
rpf-0.30/rpf/man/rpf.numParam.Rd | 3
rpf-0.30/rpf/man/rpf.numSpec.Rd | 3
rpf-0.30/rpf/man/rpf.ogive.Rd | 37 +-
rpf-0.30/rpf/man/rpf.paramInfo.Rd | 5
rpf-0.30/rpf/man/rpf.prob.Rd | 17 -
rpf-0.30/rpf/man/rpf.rescale.Rd | 13
rpf-0.30/rpf/man/rpf.rparam.Rd | 3
rpf-0.30/rpf/man/rpf.sample.Rd | 74 +---
rpf-0.30/rpf/man/science.Rd | 5
rpf-0.30/rpf/man/ssEAP.Rd |only
rpf-0.30/rpf/man/sumScoreEAP.Rd |only
rpf-0.30/rpf/man/write.flexmirt.Rd | 18 -
rpf-0.30/rpf/src/Eigen |only
rpf-0.30/rpf/src/Makevars |only
rpf-0.30/rpf/src/ba81quad.cpp |only
rpf-0.30/rpf/src/ba81quad.h |only
rpf-0.30/rpf/src/diagnose.cpp |only
rpf-0.30/rpf/src/dmvnorm.cpp |only
rpf-0.30/rpf/src/dmvnorm.h |only
rpf-0.30/rpf/src/glue.cpp |only
rpf-0.30/rpf/src/libifa-rpf.cpp |only
rpf-0.30/rpf/src/rpf.h | 85 +++++
rpf-0.30/rpf/vignettes/diagnostics.Rmd |only
rpf-0.30/rpf/vignettes/flexmirt-plots.Rmd |only
97 files changed, 1492 insertions(+), 701 deletions(-)
Title: Robust Linear Mixed Effects Models
Diff between robustlmm versions 1.4-3 dated 2014-03-13 and 1.5 dated 2014-06-13
Description: Robust mixed effects modeling by robustification
of scoring equations using the Design Adaptive Scale approach.
Author: Manuel Koller
Maintainer: Manuel Koller
DESCRIPTION | 8
MD5 | 50 ++--
R/DAS-scale.R | 9
R/accessors.R | 27 +-
R/mutators.R | 4
R/rlmer.R | 117 ++++++++---
build/vignette.rds |binary
inst/doc/rlmer.pdf |binary
tests/compare-methods.Rout.save | 22 +-
tests/rlmerMod.R | 2
tests/tau.R | 1
vignettes/cache/6b459128b6f80b01986ff6c4115e7dfb52f962fb |binary
vignettes/cache/e514dc7b17af4b19dcabad5cf474029c569fca86 |binary
vignettes/figs/fig-ex-penicillin-qq-ranef.pdf |binary
vignettes/figs/fig-ex-penicillin-qq-resid.pdf |binary
vignettes/figs/fig-ex-penicillin-raw.pdf |binary
vignettes/figs/fig-ex-penicillin-robustness-weights.pdf |binary
vignettes/figs/fig-ex-penicillin-ta.pdf |binary
vignettes/figs/fig-ex-sleepstudy-ex-comparsion-subsample.pdf |binary
vignettes/figs/fig-ex-sleepstudy-ex-comparsion.pdf |binary
vignettes/figs/fig-ex-sleepstudy-qq-ranef.pdf |binary
vignettes/figs/fig-ex-sleepstudy-qq-resid.pdf |binary
vignettes/figs/fig-ex-sleepstudy-ranef-scatterplot.pdf |binary
vignettes/figs/fig-ex-sleepstudy-raw.pdf |binary
vignettes/figs/fig-ex-sleepstudy-ta.pdf |binary
vignettes/figs/fig-ex-smoothedHuber.pdf |binary
26 files changed, 154 insertions(+), 86 deletions(-)
Title: The Guardian API Wrapper
Diff between GuardianR versions 0.3 dated 2014-02-20 and 0.4 dated 2014-06-13
Description: Provides an interface to the Open Platform's Content API of the Guardian Media Group. It retrieves content from news outlets The Observer, The Guardian, and guardian.co.uk from 1999 to current day
Author: Marco Toledo Bastos & Cornelius Puschmann
Maintainer: Marco Toledo Bastos
ChangeLog | 6 +++++-
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
NAMESPACE | 5 +++++
4 files changed, 17 insertions(+), 8 deletions(-)
Title: An R package for changepoint analysis
Diff between changepoint versions 1.1.2 dated 2014-03-27 and 1.1.3 dated 2014-06-13
Description: Implements various mainstream and specialised changepoint methods for finding single and multiple changepoints within data. Many popular non-parametric and frequentist methods are included. The cpt.mean, cpt.var, cpt.meanvar functions should be your first point of call.
Author: Rebecca Killick [aut, cre],
Kaylea Haynes [aut],
Idris Eckley [ctb],
Paul Fearnhead [ctb]
Maintainer: Rebecca Killick
DESCRIPTION | 9 ++++-----
MD5 | 17 +++++++++--------
NAMESPACE | 5 ++---
NEWS | 9 +++++++++
R/multiple.norm.R | 23 ++++++++++++++++-------
inst |only
man/changepoint-package.Rd | 4 ++--
man/cpt.mean.Rd | 13 +++++++------
man/cpt.meanvar.Rd | 11 ++++++-----
man/cpt.var.Rd | 12 +++++++-----
10 files changed, 62 insertions(+), 41 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-04-29 0.16.0
2014-04-14 0.15.0
2014-04-01 0.14.0
2014-03-14 0.13.0
2014-03-10 0.12.0
2013-11-04 0.10.3
2012-08-03 0.10.2
2012-07-11 0.10.1
2011-11-21 0.9.9
2011-10-24 0.9.8
2011-10-23 0.9.7
2011-04-04 0.6.4
2011-02-10 0.6.0
2010-12-22 0.0.16
2010-12-03 0.0.15
2010-11-22 0.0.14
2010-07-07 0.0.12
2010-02-09 0.0.10
2010-02-08 0.0.9
2009-12-28 0.0.8
2009-12-02 0.0.6
2009-01-26 0.0.2
Title: Estimation of conditional quantiles using optimal quantization
Diff between QuantifQuantile versions 0.1 dated 2014-04-18 and 0.2 dated 2014-06-13
More information about QuantifQuantile at CRAN
Description: Estimation of conditional quantiles using optimal quantization.
Construction of an optimal grid of N quantizers, estimation of conditional
quantiles and data driven selection of the size N of the grid. Graphical
illustrations for the selection of N and of resulting estimated curves or
surfaces when the dimension of the covariate is one or two.
Author: Isabelle Charlier and Davy Paindaveine and Jerome Saracco
Maintainer: Isabelle Charlier
DESCRIPTION | 10 +-
MD5 | 36 ++++-----
NAMESPACE | 2
R/QuantifQuantile.R | 90 ++++++++++++++--------
R/QuantifQuantile.d.R | 88 ++++++++++++++--------
R/QuantifQuantile.d2.R | 95 +++++++++++++++--------
R/choice.grid.R | 25 +++---
R/plot.QuantifQuantile.R | 14 +--
R/plot.select.N.QuantifQuantile.R | 34 +++++++-
R/print.QuantifQuantile.R | 10 +-
R/summary.QuantifQuantile.R | 22 +++--
man/QuantifQuantile.Rd | 134 ++++++++++++++++-----------------
man/QuantifQuantile.d.Rd | 140 ++++++++++++++++-------------------
man/QuantifQuantile.d2.Rd | 139 +++++++++++++++++-----------------
man/choice.grid.Rd | 39 ++++-----
man/plot.QuantifQuantile.Rd | 40 ++++------
man/plot.select.N.QuantifQuantile.Rd | 38 ++++-----
man/print.QuantifQuantile.Rd | 26 +++---
man/summary.QuantifQuantile.Rd | 30 +++----
19 files changed, 549 insertions(+), 463 deletions(-)
Permanent link
Title: display and analyze ROC curves
Diff between pROC versions 1.7.2 dated 2014-04-06 and 1.7.3 dated 2014-06-13
Description: Tools for visualizing, smoothing and comparing receiver operating characteristic (ROC curves). (Partial) area under the curve (AUC) can be compared with statistical tests based on U-statistics or bootstrap. Confidence intervals can be computed for (p)AUC or ROC curves.
Author: Xavier Robin, Natacha Turck, Alexandre Hainard, Natalia Tiberti, Frédérique Lisacek, Jean-Charles Sanchez and Markus Müller.
Maintainer: Xavier Robin
DESCRIPTION | 10 +++++-----
MD5 | 8 ++++----
NEWS | 4 ++++
R/auc.R | 2 +-
R/print.R | 6 +++---
5 files changed, 17 insertions(+), 13 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-12-11 0.4.1
2012-02-12 0.4.0
2011-08-08 0.3
2010-10-19 0.2.1
2010-10-18 0.2
2010-09-15 0.1.4
2010-07-24 0.1.3
2010-06-21 0.1.2
2010-02-18 0.1.1
2010-02-13 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-02-01 1.1
2013-03-09 1.0
Title: Optimal pricing of assets with fixed expiry date.
Diff between AssetPricing versions 0.1-3 dated 2014-03-05 and 1.0-0 dated 2014-06-13
Description: Calculates the optimal price of assets (such as
airline flight seats, hotel room bookings) whose value
becomes zero after a fixed ``expiry date''. Assumes
potential customers arrive (possibly in groups) according
to a known inhomogeneous Poisson process. Also assumes a
known time-varying elasticity of demand (price sensitivity)
function. Uses elementary techniques based on ordinary
differential equations. Uses the package deSolve to effect
the solution of these differential equations.
Author: Rolf Turner
Maintainer: Rolf Turner
Changelog | 15 +++++++++++++++
DESCRIPTION | 8 ++++----
MD5 | 15 ++++++++-------
R/plot.flap.R | 5 ++++-
inst/CITATION |only
man/buildS.Rd | 8 ++++++--
man/plot.AssetPricing.Rd | 31 +++++++++++++++++++++----------
man/vsolve.Rd | 10 ++++++++--
man/xsolve.Rd | 8 ++++++--
9 files changed, 72 insertions(+), 28 deletions(-)