New package qdapRegex with initial version 0.1.1
Package: qdapRegex
Type: Package
Title: Regular Expression Removal, Extraction, & Replacement Tools
Version: 0.1.1
Date: 2014-04-19
Authors@R: c(person("Jason", "Gray", "", role = "ctb"), person("Tyler", "Rinker", email = "tyler.rinker@gmail.com", role = c("aut", "cre")))
Maintainer: Tyler Rinker
Depends: R (>= 3.0.0)
Imports: stringi
Suggests: testthat
LazyData: TRUE
Description: A collection of regex tools associated with the qdap package that may be useful outside of the context of discourse analysis. Tools include removal/extraction/replacement of abbreviations, dates, dollar amounts, email addresses, hash tags, numbers, percentages, person tags, phone numbers, times, and zip codes.
License: GPL-2
URL: http://trinker.github.com/qdapRegex/
BugReports: http://github.com/trinker/qdapRegex/issues
Collate: 'S.R' 'utils.R' 'rm_default.R' 'escape.R' 'grab.R' 'pastex.R' 'qdapRegex-package.R' 'rm_.R' 'rm_abbreviation.R' 'rm_between.R' 'rm_bracket.R' 'rm_caps.R' 'rm_citation.R' 'rm_city_state.R' 'rm_city_state_zip.R' 'rm_date.R' 'rm_dollar.R' 'rm_email.R' 'rm_emoticon.R' 'rm_endmark.R' 'rm_hash.R' 'rm_nchar_words.R' 'rm_non_ascii.R' 'rm_number.R' 'rm_percent.R' 'rm_phone.R' 'rm_tag.R' 'rm_time.R' 'rm_title_name.R' 'rm_url.R' 'rm_white.R' 'rm_zip.R' 'validate.R'
Packaged: 2014-09-20 20:12:24 UTC; trinker
Author: Jason Gray [ctb], Tyler Rinker [aut, cre]
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-20 23:38:47

More information about qdapRegex at CRAN
Permanent link

Package DescTools updated to version 0.99.8 with previous version 0.99.7 dated 2014-05-04

Title: Tools for descriptive statistics
Description: DescTools contains a bunch of basic statistic functions and convenience wrappers for efficiently describing data, creating specific plots, doing reports using MS Word, Excel or PowerPoint. The package's intention is to offer a toolbox, which facilitates the (notoriously time consuming) first descriptive tasks in data analysis, consisting of calculating descriptive statistics, drawing graphical summaries and reporting the results. Many of the included functions can be found scattered in other packages and other sources written partly by Titans of R. The reason for collecting them here, was primarily to have them consolidated in ONE instead of dozens of packages (which themselves might depend on other packages which are not needed at all), and to provide a common and consistent interface as far as function and arguments naming, NA handling, recycling rules etc. are concerned. Google style guides were used as naming rules (in absence of convincing alternatives). The 'camel style' was consequently applied to functions borrowed from contributed R packages as well.
Author: Andri Signorell. Includes R source code and/or documentation previously published by (in alphabetical order): Nanina Anderegg, Tomas Aragon, Antti Arppe, Adrian Baddeley, Ben Bolker, Frederico Caeiro, Stephane Champely, Daniel Chessel, Leanne Chhay, Michael Dewey, Harold C. Doran, Stephane Dray, Charles Dupont, Jeff Enos, Claus Ekstrom, Martin Elff, John Fox, Tal Galili, Matthias Gamer, Joseph L. Gastwirth, Yulia R. Gel, Juergen Gross, Gabor Grothendieck, Frank E. Harrell Jr, Michael Hoehle, Christian W. Hoffmann, Markus Huerzeler, Wallace W. Hui, Rob J. Hyndman, Pablo J. Villacorta Iglesias, Matthias Kohl, Mikko Korpela, Detlew Labes, Friederich Leisch, Jim Lemon, Martin Maechler, Arni Magnusson, Daniel Malter, George Marsaglia, John Marsaglia, Alina Matei, David Meyer, Weiwen Miao, Yongyi Min, Markus Naepflin, Daniel Navarro, Klaus Nordhausen, Derek Ogle, Nick Parsons, Sandrine Pavoine, Roland Rapold, William Revelle, Tyler Rinker, Caroline Rodriguez, Venkatraman E. Seshan, Greg Snow, Michael Smithson, Werner A. Stahel, Yves Tille, Adrian Trapletti, Kevin Ushey, Jeremy VanDerWal, Bill Venables, John Verzani, Gregory R. Warnes, Stefan Wellek, Peter Wolf, Daniel Wollschlaeger, Achim Zeileis
Maintainer: Andri Signorell

Diff between DescTools versions 0.99.7 dated 2014-05-04 and 0.99.8 dated 2014-09-20

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Package shapes updated to version 1.1-10 with previous version 1.1-9 dated 2013-12-21

Title: Statistical shape analysis
Description: Routines for the statistical analysis of shapes. In particular, the package provides routines for Procrustes analysis, displaying shapes and principal components, testing for mean shape difference, thin-plate spline transformation grids and comparing covariance matrices.
Author: Ian L. Dryden
Maintainer: Ian Dryden

Diff between shapes versions 1.1-9 dated 2013-12-21 and 1.1-10 dated 2014-09-20

 DESCRIPTION            |   10 
 MD5                    |   28 
 R/shapes.R             |14554 ++++++++++++++++++++++++-------------------------
 data/brains.rda        |binary
 data/gorf.dat.rda      |binary
 data/gorm.dat.rda      |binary
 data/macf.dat.rda      |binary
 data/macm.dat.rda      |binary
 data/nsa.rda           |binary
 data/protein.rda       |binary
 data/qcet2.dat.rda     |binary
 data/qlet2.dat.rda     |binary
 data/qset2.dat.rda     |binary
 data/sooty.dat.rda     |binary
 man/transformations.Rd |   94 
 15 files changed, 7354 insertions(+), 7332 deletions(-)

More information about shapes at CRAN
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Package randomizationInference updated to version 1.0.2 with previous version 1.0.1 dated 2013-12-03

Title: Flexible Randomization-Based Inference
Description: The 'randomizationInference' package allows the user to conduct randomization-based inference for a wide variety of experimental scenarios. The package leverages a potential outcomes framework to output randomization-based p-values and null intervals for test statistics geared toward any estimands of interest, according to the specified null and alternative hypotheses. Users can define custom randomization schemes so that the randomization distributions are accurate for their experimental settings. The package also creates visualizations of randomization distributions and can test multiple test statistics simultaneously.
Author: Joseph J. Lee and Tirthankar Dasgupta
Maintainer: Joseph J. Lee

Diff between randomizationInference versions 1.0.1 dated 2013-12-03 and 1.0.2 dated 2014-09-20

 DESCRIPTION                           |   10 +++---
 MD5                                   |   30 ++++++++++----------
 R/blockRand.R                         |   14 ++++-----
 R/completeRand.R                      |   12 ++++----
 R/latinRand.R                         |   18 ++++++------
 R/randInterval.R                      |    2 -
 R/randTest.R                          |   48 ++++++++++++++++++---------------
 man/blockRand.Rd                      |   18 ++++++------
 man/completeRand.Rd                   |   16 +++++------
 man/diffMeans.Rd                      |    4 +-
 man/diffMeansVector.Rd                |    4 +-
 man/latinRand.Rd                      |   16 +++++------
 man/randInterval.Rd                   |    8 ++---
 man/randPlot.Rd                       |    4 +-
 man/randTest.Rd                       |   41 +++++++++++++++++-----------
 man/randomizationInference-package.Rd |   49 +++++++++++++++++++++++-----------
 16 files changed, 164 insertions(+), 130 deletions(-)

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New package audited with initial version 1.9
Package: audited
Type: Package
Title: Automatic Tracing and Display of Changes to Row Count
Version: 1.9
Date: 2014-09-18
Author: Tim Bergsma
Maintainer: Tim Bergsma
Imports: igraph, metrumrg, methods
Suggests: xlsx, rJava
Description: Classifies a data.frame such that row deletions and additions are tracked. A mechanism exists to give formal names to the row subsets that are coming or going. These names are used to populate a directed graph giving an account of all the transactions contributing to the state of the data.frame. The generic as.audited() has a method for keyed data.frames that creates an audited data.frame. Methods exist that track row count changes for the generics: Ops, !, ^, |, [, subset, head, tail, unique, cast, melt, aggregate, and merge. audit() extracts the transaction table from the audited object, while write.audit() and read.audit() control exchange with the file system. An audit method for as.igraph() creates a graph object that can be displayed with the corresponding plot method. Use options(audit= ) to provide an extra level of classification. Use options(artifact=TRUE) and as.xlsx() to save dropped records to file.
License: GPL
Packaged: 2014-09-20 16:05:24 UTC; timb
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-20 22:03:15

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Package RcppOctave updated to version 0.14.5 with previous version 0.14.1 dated 2014-03-10

Title: Seamless Interface to Octave -- and Matlab
Description: Direct interface to Octave. The primary goal is to facilitate the port of Matlab/Octave scripts to R. The package enables to call any Octave functions from R and as well as browsing their documentation, passing variables between R and Octave, using R core RNGs in Octave, which ensures that stochastic computations are also reproducible.
Author: Renaud Gaujoux
Maintainer: Renaud Gaujoux

Diff between RcppOctave versions 0.14.1 dated 2014-03-10 and 0.14.5 dated 2014-09-20

 DESCRIPTION                               |    8 
 MD5                                       |  110 +++++------
 NEWS                                      |   30 +++
 R/config.R                                |    2 
 R/interface.R                             |    4 
 R/package.R                               |    9 
 R/utils.R                                 |    6 
 build/RcppOctave.pdf                      |binary
 build/vignette.rds                        |binary
 configure                                 |  280 ++++++++++++++++++++++++++----
 configure.ac                              |   42 +++-
 configure.win                             |    6 
 inst/doc/RcppOctave-unitTests.Rnw         |   36 +--
 inst/doc/RcppOctave-unitTests.pdf         |binary
 inst/doc/RcppOctave.Rnw                   |   11 -
 inst/doc/RcppOctave.pdf                   |binary
 man/Octave-class.Rd                       |   44 ++--
 man/Octave.config.Rd                      |    9 
 man/Octave.home.Rd                        |   26 +-
 man/OctaveFunction-class.Rd               |   22 +-
 man/OctaveInterface.Rd                    |  100 +++++-----
 man/RcppOctave-package.Rd                 |   25 ++
 man/check.equal.Rd                        |   17 -
 man/dot-CallOctave.Rd                     |   81 ++++----
 man/dot-DollarNames-commaOctave-method.Rd |   10 -
 man/mfiles.Rd                             |   17 -
 man/o_addpath.Rd                          |   18 -
 man/o_assign.Rd                           |   49 ++---
 man/o_clear.Rd                            |   20 --
 man/o_config_info.Rd                      |    7 
 man/o_eval.Rd                             |   21 --
 man/o_exist.Rd                            |   10 -
 man/o_help.Rd                             |   72 +++----
 man/o_identity.Rd                         |    4 
 man/o_load.Rd                             |   15 -
 man/o_ls.Rd                               |   19 --
 man/o_rexp.Rd                             |   11 -
 man/o_rgamma.Rd                           |   11 -
 man/o_rnorm.Rd                            |   11 -
 man/o_runif.Rd                            |   42 ++--
 man/o_source.Rd                           |   34 +--
 man/o_version.Rd                          |    8 
 man/o_who.Rd                              |   28 +--
 man/o_whos.Rd                             |   22 --
 man/octave-ll.Rd                          |   18 -
 man/octave_config.Rd                      |   29 +--
 man/sourceExamples.Rd                     |    5 
 man/system.mfile.Rd                       |    8 
 src/Makevars.in                           |   20 +-
 src/Makevars.win.in                       |   22 +-
 src/Redirect.hpp                          |   17 +
 src/modules/Makefile.in                   |   11 -
 src/rcpp_octave.cpp                       |   47 +++--
 src/rcpp_octave.h                         |    2 
 vignettes/RcppOctave-unitTests.Rnw        |   36 +--
 vignettes/RcppOctave.Rnw                  |   11 -
 56 files changed, 886 insertions(+), 637 deletions(-)

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Package mitools updated to version 2.3 with previous version 2.2 dated 2012-05-30

Title: Tools for multiple imputation of missing data
Description: Tools to perform analyses and combine results from multiple-imputation datasets.
Author: Thomas Lumley
Maintainer: Thomas Lumley

Diff between mitools versions 2.2 dated 2012-05-30 and 2.3 dated 2014-09-20

 DESCRIPTION      |   13 +++++++------
 MD5              |   15 +++++++++------
 NEWS             |    2 ++
 R/MI.R           |   15 +++++++--------
 R/update.R       |    6 +++---
 build            |only
 data/smi.rda     |binary
 inst/doc/smi.R   |only
 inst/doc/smi.pdf |binary
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 10 files changed, 28 insertions(+), 23 deletions(-)

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Package mco updated to version 1.0.13 with previous version 1.0.12 dated 2013-03-21

Title: Multiple criteria optimization algorithms and related functions
Description: Functions for multiple criteria optimization using genetic algorithms and related test problems
Author: Olaf Mersmann [aut, cre], Heike Trautmann [ctb], Detlef Steuer [ctb], Bernd Bischl [ctb], Kalyanmoy Deb [cph]
Maintainer: Olaf Mersmann

Diff between mco versions 1.0.12 dated 2013-03-21 and 1.0.13 dated 2014-09-20

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 mco-1.0.13/mco/DESCRIPTION  |   32 +++---
 mco-1.0.13/mco/MD5          |   13 +-
 mco-1.0.13/mco/NAMESPACE    |    2 
 mco-1.0.13/mco/R/nsga2.R    |   28 +++--
 mco-1.0.13/mco/R/qs.R       |    4 
 mco-1.0.13/mco/man/nsga2.Rd |   18 ++-
 mco-1.0.13/mco/src/nsga2.c  |  229 +++++++++++++++++++++++---------------------
 8 files changed, 183 insertions(+), 143 deletions(-)

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Package llama updated to version 0.7.2 with previous version 0.7.1 dated 2014-08-13

Title: Leveraging Learning to Automatically Manage Algorithms
Description: Provides functionality to train and evaluate algorithm selection models for portfolios.
Author: Lars Kotthoff [aut,cre], Bernd Bischl [aut], Barry Hurley [ctb], Talal Rahwan [ctb]
Maintainer: Lars Kotthoff

Diff between llama versions 0.7.1 dated 2014-08-13 and 0.7.2 dated 2014-09-20

 DESCRIPTION                                      |    8 ++--
 MD5                                              |   42 +++++++++++------------
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 R/input.R                                        |   32 ++++++++++++-----
 R/misc.R                                         |    8 +++-
 R/misclassificationPenalties.R                   |    9 +++-
 R/parscores.R                                    |   17 ++++++---
 R/successes.R                                    |   19 ++++++----
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 man/misc.Rd                                      |   17 +++++----
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 man/parscores.Rd                                 |   25 ++++++++++---
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 tests/testthat/test.input.R                      |   35 ++++++++++++++++++-
 tests/testthat/test.misc.R                       |    8 ++++
 tests/testthat/test.misclassificationPenalties.R |   11 ++++++
 tests/testthat/test.parscores.R                  |   29 ++++++++++++---
 tests/testthat/test.successes.R                  |   27 +++++++++++---
 22 files changed, 266 insertions(+), 88 deletions(-)

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Package rdyncall (with last version 0.7.5) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-09-12 0.7.5
2011-12-13 0.7.4
2011-07-23 0.7.3
2011-04-27 0.7.2
2011-04-26 0.7.0

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Package plink (with last version 1.3-1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2011-07-25 1.3-1
2011-02-12 1.3-0
2010-10-19 1.2-7
2010-09-15 1.2-6
2010-08-13 1.2-5
2010-07-26 1.2-4
2010-04-19 1.2-3
2009-10-23 1.2-2
2009-09-29 1.2-1
2009-08-19 1.2-0
2009-08-07 1.1-6
2009-07-26 1.1-5
2009-06-19 1.1-4
2009-06-14 1.1-3
2009-06-02 1.1-2
2009-05-28 1.1-1
2009-05-15 1.1-0
2009-04-19 1.0.0
2009-01-26 0.1-1
2008-09-28 0.1-0
2008-09-10 0.0-6
2008-09-08 0.0-5
2007-12-24 0.0-4
2007-12-02 0.0-3
2007-09-21 0.0-2
2007-09-13 0.0-1
2007-09-04 0.0-0

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Package csound (with last version 0.1-1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-04-30 0.1-1
2011-12-19 0.1-0

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Package playitbyr (with last version 0.2-1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2012-05-03 0.2-1
2012-05-02 0.2-0
2011-07-23 0.1-1

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New package vdmR with initial version 0.1.0
Package: vdmR
Type: Package
Title: Visual Data Mining Tools for R
Version: 0.1.0
Date: 2014-08-14
Author: Tomokazu Fujino
Maintainer: Tomokazu Fujino
Description: This provides web based visual data mining tools by adding interactive functions to ggplot2 graphics. Brushing and linking between the multiple plots is one of the main feature of this package. Currently scatter plot, histogram, parallel coordinate plot and choropleth map are supported.
VignetteBuilder: knitr
Depends: R (>= 3.0.0)
Imports: ggplot2, plyr, maptools, gridSVG, grid, rjson, GGally, Rook, dplyr
Suggests: testthat, rgeos, knitr
License: GPL-2
Packaged: 2014-09-20 07:26:23 UTC; fujino
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-20 12:14:16

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New package RRreg with initial version 0.1.3
Package: RRreg
Type: Package
Title: Correlation and Regression Analyses of Randomized Response Designs
Authors@R: c(person( given="Daniel W.",family="Heck",email="dheck@mail.uni-mannheim.de", role=c("aut","cre")), person(given="Morten",family="Moshagen",email="moshagen@uni-mannheim.de", rol=c("aut")))
Author: Daniel W. Heck [aut, cre], Morten Moshagen [aut]
Maintainer: Daniel W. Heck
Depends: R (>= 3.0.0)
Imports: parallel, doParallel, foreach
Suggests: knitr
Description: RRreg provides univariate and multivariate methods to analyze randomized response (RR) survey designs (e.g., Warner, S. L. (1965). Randomized response: A survey technique for eliminating evasive answer bias. Journal of the American Statistical Association, 60, 63–69). Besides univariate estimates of true proportions, RR variables can be used for correlations, as dependent variable in a logistic regression and as predictors in a linear regression. For simulation and bootstrap purposes, RR data can be generated according to several models.
License: GPL-2
Encoding: UTF-8
LazyLoad: yes
URL: https://dl.dropboxusercontent.com/u/21456540/RRreg/index.html
VignetteBuilder: knitr
Version: 0.1.3
Date: 2014-09-20
Collate: 'RRcheck.R' 'RRcor.models.R' 'RRcor.R' 'RRgen.R' 'RRlin.getPW.R' 'RRlin.ll.R' 'RRlin.R' 'RRlog.CDM.R' 'RRlog.FR.R' 'RRlog.Kuk.R' 'RRlog.Mangat.R' 'RRlog.R' 'RRlog.SLD.R' 'RRlog.UQTknown.R' 'RRlog.UQTunknown.R' 'RRlog.Warner.R' 'RRreg-package.R' 'RRsimu.R' 'RRuni.models.R' 'RRuni.R'
Packaged: 2014-09-20 09:53:03 UTC; Daniel
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-20 12:14:12

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New package REDCapR with initial version 0.4-28
Package: REDCapR
Title: Interaction between R and REDCap
Description: Encapsulates functions to streamline calls from R
Version: 0.4-28
Date: 2014-09-19
Authors@R: c(person("Will", "Beasley", role = c("aut", "cre"), email = "wibeasley@hotmail.com"), person("David", "Bard", role = "ctb"), person("Thomas", "Wilson", role = "ctb"), person(given="John J", family="Aponte", role = "ctb"), person("Rollie", "Parrish", role = "ctb"))
Author: Will Beasley [aut, cre], David Bard [ctb], Thomas Wilson [ctb], John J Aponte [ctb], Rollie Parrish [ctb]
Maintainer: Will Beasley
URL: http://ouhsc.edu/bbmc/
Depends: R(>= 3.0.0), stats
Imports: httr, plyr, stringr
Suggests: devtools, knitr, methods, RODBC, testit, testthat
License: GPL-3
LazyData: TRUE
VignetteBuilder: knitr
Repository: CRAN
Repository/R-Forge/Project: redcapr
Repository/R-Forge/Revision: 23
Repository/R-Forge/DateTimeStamp: 2014-09-19 15:03:52
Date/Publication: 2014-09-20 07:19:22
Packaged: 2014-09-19 15:50:29 UTC; rforge
NeedsCompilation: no

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New package OrdLogReg with initial version 1.1
Package: OrdLogReg
Type: Package
Title: Ordinal Logic Regression
Version: 1.1
Date: 2014-09-05
Author: Bethany Wolf
Maintainer: Bethany Wolf
Depends: LogicReg
Description: Method for develops a classification model for ordinal responses based on logic regression.
License: GPL-2
Packaged: 2014-09-19 16:02:04 UTC; wolfb
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-20 07:18:07

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New package MST with initial version 1.0
Package: MST
Type: Package
Title: Multivariate Survival Trees
Version: 1.0
Date: 2014-09-19
Author: Xiaogang Su, Peter Calhoun, and Juanjuan Fan
Maintainer: Peter Calhoun
Description: Constructs trees for multivariate survival data using marginal and frailty models
License: GPL-2
Imports: survival, MASS
Packaged: 2014-09-19 22:28:18 UTC; pcalhoun
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-09-20 07:14:13

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Package mp updated to version 0.1.2 with previous version 0.1 dated 2014-08-03

Title: Multidimensional Projection Techniques
Description: Implementation of multidimensional projection techniques
Author: Francisco M. Fatore, Samuel G. Fadel
Maintainer: Francisco M. Fatore

Diff between mp versions 0.1 dated 2014-08-03 and 0.1.2 dated 2014-09-20

 DESCRIPTION        |   14 ++++---
 MD5                |   11 +++--
 NAMESPACE          |    1 
 R/forceScheme.R    |  101 ++++++++++++++++-------------------------------------
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 8 files changed, 63 insertions(+), 85 deletions(-)

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Package Density.T.HoldOut updated to version 2.00 with previous version 1.02 dated 2014-04-18

Title: Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation
Description: Implementation in the density framework of the non-combinatorial algorithm and its greedy version, introduced by Magalhães and Rozenholc (2014), for T-estimation Hold-Out proposed in Birgé (2006, Section 9). The package provide an implementation which uses several families of estimators (regular and irregular histograms, kernel estimators) which may be used alone or combined. As a complement, provides also a comparison with other Held-Out derived from least-squares and maximum-likelihood. This package implements also the T-estimation Hold-Out derived from the test introduced in Baraud (2011).
Author: Nelo Magalhães (Univ. Paris Sud 11 - INRIA team Select) and Yves Rozenholc (Univ. Paris Descartes - INRIA team Select)
Maintainer: Nelo Magalhães

Diff between Density.T.HoldOut versions 1.02 dated 2014-04-18 and 2.00 dated 2014-09-20

 DESCRIPTION          |   10 
 MD5                  |    6 
 R/DensityTestim.R    | 1415 +++++++++++++++++++++++++--------------------------
 man/DensityTestim.Rd |   37 -
 4 files changed, 742 insertions(+), 726 deletions(-)

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