Title: Variance Dispersion and Fraction of Design Space Plots
Diff between VdgRsm versions 1.01 dated 2014-03-06 and 1.02 dated 2014-10-11
Description: This package creates variance dispersion graphs (VDGs), fraction of design space (FDS) plots for second-order model designs in spherical or cuboidal regions, and also generates the central composite designs, factorial designs.
Author: Patchanok Srisuradetchai, John J. Borkowski
Maintainer: Patchanok Srisuradetchai
DESCRIPTION | 14 -
MD5 | 20 +-
NAMESPACE | 11 -
R/VdgRsm.R | 356 +++++++++++++++++++++++++++++++++++++-------------
man/VdgRsm-package.Rd | 6
man/cpv.Rd | 6
man/fds.cube.Rd | 14 -
man/fds.sphere.Rd | 15 --
man/gen.CCD.Rd |only
man/gen.Factr.Rd |only
man/hyperarcs.vdg.Rd | 7
man/spv.Rd | 18 --
12 files changed, 311 insertions(+), 156 deletions(-)
Title: Routines for fitting kinetic models with one or more state
variables to chemical degradation data
Diff between mkin versions 0.9-32 dated 2014-07-24 and 0.9-33 dated 2014-10-11
Description: Calculation routines based on the FOCUS Kinetics Report (2006).
Includes a function for conveniently defining differential equation models,
model solution based on eigenvalues if possible or using numerical solvers
and a choice of the optimisation methods made available by the FME package
(default is a Levenberg-Marquardt variant). Please note that no warranty is
implied for correctness of results or fitness for a particular purpose.
Author: Johannes Ranke [aut, cre, cph],
Katrin Lindenberger [ctb],
René Lehmann [ctb],
Eurofins Regulatory AG [cph]
Maintainer: Johannes Ranke
DESCRIPTION | 12 -
MD5 | 41 +++---
NEWS | 41 ++++++
R/mkinerrmin.R | 9 -
R/mkinfit.R | 32 +++--
R/plot.mkinfit.R | 2
R/transform_odeparms.R | 15 ++
README.md | 3
TODO | 4
inst/doc/FOCUS_L.R | 20 ---
inst/doc/FOCUS_L.html | 242 ++++++++++++++++++++------------------
inst/doc/FOCUS_Z.R | 56 ++------
inst/doc/FOCUS_Z.Rnw | 1
inst/doc/FOCUS_Z.pdf |binary
inst/doc/mkin.R | 2
inst/doc/mkin.pdf |binary
inst/unitTests/runit.mkinerrmin.R |only
inst/unitTests/runit.mkinfit.R | 38 -----
man/mkinerrmin.Rd | 10 +
man/mkinfit.Rd | 3
tests/doRUnit.R | 1
vignettes/FOCUS_Z.Rnw | 1
22 files changed, 278 insertions(+), 255 deletions(-)
Title: Analysis of Factorial Experiments
Diff between afex versions 0.10-113 dated 2014-08-04 and 0.11-131 dated 2014-10-11
Description: Provides convenience functions for analyzing factorial experiments
using ANOVA or mixed models. ez.glm(), aov.car(), or aov4() allow
convenient specification of between, within (i.e., repeated-measures), or
mixed between-within (i.e., split-plot) ANOVAs for data in long format
(i.e., one observation per row) aggregating more then one observation per
individual and cell of the design. mixed() fits a mixed model using
lme4::lmer() and computes p-values for all effects in the model using
either Kenward-Roger approximation of degrees of freedom (LMM only),
parametric bootstrap (LMMs and GLMMs) or likelihood ratio tests (LMMs and
GLMMs). afex uses type 3 sums of squares as default (imitating commercial
statistical software). compare.2.vectors() compares two vectors using a
variety of tests (t, wilcoxon, and permutation).
Author: Henrik Singmann [aut, cre],
Ben Bolker [aut],
Søren Højsgaard [ctb],
John Fox [ctb],
Michael A. Lawrence [ctb],
Ulf Mertens [ctb]
Maintainer: Henrik Singmann
DESCRIPTION | 40 +++++-----
MD5 | 45 ++++++------
NAMESPACE | 14 +++
NEWS | 39 ++++++++++
R/afex-package.R | 10 +-
R/allFit.R |only
R/aov.car.R | 35 +++++++--
R/mixed.R | 114 ++++++++++++++++++++++++++-----
man/afex-package.Rd | 12 +--
man/allFit.Rd |only
man/aov.car.Rd | 32 ++++----
man/compare.2.vectors.Rd | 6 -
man/md_12.1.Rd | 2
man/md_15.1.Rd | 2
man/md_16.1.Rd | 2
man/md_16.4.Rd | 2
man/mixed.Rd | 44 ++++++++++-
man/nice.anova.Rd | 6 -
man/obk.long.Rd | 2
man/round_ps.Rd | 2
man/set_sum_contrasts.Rd | 2
tests/testthat/test-all.R | 10 +-
tests/testthat/test-aov.car-bugs.R |only
tests/testthat/test-aov.car-structural.R | 18 ++++
tests/testthat/test-mixed-structure.R | 29 +++++++
25 files changed, 354 insertions(+), 114 deletions(-)
Title: VAR modelling: estimation, testing, and prediction
Diff between VAR.etp versions 0.4 dated 2014-06-07 and 0.5 dated 2014-10-11
Description: Estimation, Hypothesis Testing, Prediction for Stationary Vector Autoregressive Models
Author: Jae. H. Kim
Maintainer: Jae H. Kim
DESCRIPTION | 8 ++++----
MD5 | 16 ++++++++--------
R/PR2.R | 2 +-
R/PR3.R | 2 +-
man/PR.IARM.Rd | 10 ++++------
man/VAR.LR.Rd | 9 +++++++--
man/VAR.Pope.Rd | 6 +++---
man/VAR.Wald.Rd | 10 ++++++++--
man/VAR.etp-package.Rd | 4 ++--
9 files changed, 38 insertions(+), 29 deletions(-)
Title: provides objects and tools to manipulate irregular heterogeneous
time data and subtime data.
Diff between timetools versions 1.6.0 dated 2014-05-13 and 1.6.1 dated 2014-10-11
Description: This package is intended to manipulate irregular time series such as subtime series, series based on time intervals, etc. This package uses only POSIX* format. Main things defined in this package are the classes POSIXcti, POSIXctp, TimeIntervalDataFrame, TimeInstantDataFrame, SubtimeDataFrame, methods to switch from one class to another and the changeSupport method for TimeIntervalDataFrame.
Author: Vladislav Navel
Maintainer: Vladislav Navel
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/TimeIntervalDataFrame.R | 2 +-
man/timetools-package.Rd | 4 ++--
4 files changed, 10 insertions(+), 10 deletions(-)
Title: Parse command-line arguments and variable interpolation
Diff between GetoptLong versions 0.0.6 dated 2014-08-18 and 0.0.7 dated 2014-10-11
Description: Parsing command-line arguments by Perl module Getopt::Long.
It also provides a simple way for variable interpolation in R.
Author: Zuguang Gu
Maintainer: Zuguang Gu
DESCRIPTION | 13 +-
MD5 | 39 +++---
NAMESPACE | 6 -
NEWS | 9 +
R/GetoptLong.R | 57 +++++++--
R/global.R |only
R/qq.R | 52 +++++---
inst/doc/GetoptLong.R | 153 +++++--------------------
inst/doc/GetoptLong.Rnw | 66 +++++------
inst/doc/GetoptLong.pdf |binary
inst/doc/variable_interpolation.R | 206 +++++++++++------------------------
inst/doc/variable_interpolation.Rnw | 33 +++--
inst/doc/variable_interpolation.pdf |binary
inst/tests/test_GetoptLong.R | 20 +--
inst/tests/test_qq.R | 28 ++--
man/GetoptLong.options.rd |only
man/GetoptLong.rd | 3
man/qq.options.rd |only
man/qq.rd | 1
man/qqcat.rd | 8 -
vignettes/GetoptLong.Rnw | 66 +++++------
vignettes/variable_interpolation.Rnw | 33 +++--
22 files changed, 353 insertions(+), 440 deletions(-)
Title: A Grammar of Data Manipulation
Diff between dplyr versions 0.3.0.1 dated 2014-10-08 and 0.3.0.2 dated 2014-10-11
Description: A fast, consistent tool for working with data frame like objects,
both in memory and out of memory.
Author: Hadley Wickham [aut, cre],
Romain Francois [aut],
RStudio [cph]
Maintainer: Hadley Wickham
DESCRIPTION | 8 +++---
MD5 | 22 +++++++++---------
R/src-mysql.r | 2 -
R/src-postgres.r | 2 -
inst/doc/databases.html | 26 +++++++---------------
inst/doc/introduction.Rmd | 2 -
inst/doc/introduction.html | 18 +++++++--------
inst/doc/memory.html | 48 ++++++++++++++++++++---------------------
inst/doc/nse.html | 4 +--
inst/doc/window-functions.html | 22 ++++--------------
tests/testthat/helper-data.r | 8 +++---
vignettes/introduction.Rmd | 2 -
12 files changed, 72 insertions(+), 92 deletions(-)