Title: Local Approximate Gaussian Process Regression
Diff between laGP versions 1.1-1 dated 2014-09-03 and 1.1-2 dated 2014-10-17
Description: Performs approximate GP regression for large computer experiments and spatial datasets. The approximation is based on finding small local designs for prediction (independently) at particular inputs. OpenMP and SNOW parallelization are supported for prediction over a vast out-of-sample testing set; GPU acceleration is also supported for an important subroutine. OpenMP and GPU features may require special compilation. An interface to lower-level (full) GP inference and prediction is also provided, as are associated wrapper routines for blackbox optimization under constraints via an augmented Lagrangian scheme, and large scale computer model calibration
Author: Robert B. Gramacy
Maintainer: Robert B. Gramacy
ChangeLog | 14 +++
DESCRIPTION | 10 +-
INSTALL | 10 +-
MD5 | 44 ++++++++----
NAMESPACE | 4 -
R/auglag.R | 2
R/calib.R |only
R/gp.R | 12 +--
R/gp_sep.R |only
build |only
demo |only
inst |only
man/aGP.Rd | 39 +++++++++-
man/deleteGP.Rd | 15 +++-
man/discrep.est.Rd |only
man/fcalib.Rd |only
man/llikGP.Rd | 9 +-
man/mleGP.Rd | 115 +++++++++++++++++++++++++------
man/newGP.Rd | 31 +++++---
man/optim.auglag.Rd | 4 -
src/covar_sep.c |only
src/covar_sep.h |only
src/gp.c | 190 ++++++++++------------------------------------------
src/gp_sep.c |only
src/gp_sep.h |only
src/util.c |only
src/util.h |only
vignettes |only
28 files changed, 272 insertions(+), 227 deletions(-)
Title: Selection of k in k-means clustering
Diff between kselection versions 0.1.0 dated 2014-09-15 and 0.1.1 dated 2014-10-17
Description: Selection of k in k-means clustering based on Pham et al. paper
``Selection of k in k-means clustering''
Author: Daniel Rodriguez Perez
Maintainer: Daniel Rodriguez Perez
DESCRIPTION | 8 ++++----
MD5 | 12 +++++++-----
NEWS |only
R/kselection.R | 2 +-
R/pham.R | 17 ++++++++++++-----
inst/tests/testPhamFix.R |only
man/kselection-package.Rd | 2 +-
man/kselection.Rd | 6 ++++--
8 files changed, 29 insertions(+), 18 deletions(-)
Title: Model Selection and Multimodel Inference Based on (Q)AIC(c)
Diff between AICcmodavg versions 2.00 dated 2014-07-15 and 2.0-1 dated 2014-10-17
Description: This package includes functions to create model selection tables based on Akaike's information criterion (AIC) and the second-order AIC (AICc), as well as their quasi-likelihood counterparts (QAIC, QAICc). The package also features functions to conduct classic model averaging (multimodel inference) for a given parameter of interest or predicted values, as well as a shrinkage version of model averaging parameter estimates. Other handy functions enable the computation of relative variable importance, evidence ratios, and confidence sets for the best model. The present version works with Cox proportional hazards models and conditional logistic regression ('coxph' and 'coxme' classes), linear models ('lm' class), generalized linear models ('glm', 'vglm', 'hurdle', and 'zeroinfl' classes), linear models fit by generalized least squares ('gls' class), linear mixed models ('lme' class), generalized linear mixed models ('mer' and 'merMod' classes), multinomial and ordinal logistic regressions ('multinom'}, 'polr', 'clm', and 'clmm' classes), robust regression models ('rlm' class), beta regression models ('betareg' class), parametric survival models ('survreg' class), nonlinear models ('nls' and 'gnls' classes), and nonlinear mixed models ('nlme' and 'nlmer' classes). The package also supports various models of 'unmarkedFit' and 'maxLikeFit' classes estimating demographic parameters after accounting for imperfect detection probabilities. Some functions also allow the creation of model selection tables for Bayesian models of the 'bugs' and 'rjags' classes.
Author: Marc J. Mazerolle
Maintainer: Marc J. Mazerolle
AICcmodavg-2.0-1/AICcmodavg/DESCRIPTION | 21
AICcmodavg-2.0-1/AICcmodavg/MD5 | 96 +-
AICcmodavg-2.0-1/AICcmodavg/NAMESPACE | 536 ++++++++++++
AICcmodavg-2.0-1/AICcmodavg/R/AICc.R | 62 +
AICcmodavg-2.0-1/AICcmodavg/R/Custom.functions.r |only
AICcmodavg-2.0-1/AICcmodavg/R/Nmix.gof.test.R |only
AICcmodavg-2.0-1/AICcmodavg/R/aictab.R | 232 +++++
AICcmodavg-2.0-1/AICcmodavg/R/boot.wt.r | 223 +++++
AICcmodavg-2.0-1/AICcmodavg/R/dictab.r | 4
AICcmodavg-2.0-1/AICcmodavg/R/extractCN.r |only
AICcmodavg-2.0-1/AICcmodavg/R/extractLL.R | 8
AICcmodavg-2.0-1/AICcmodavg/R/extractSE.R | 5
AICcmodavg-2.0-1/AICcmodavg/R/importance.R | 225 +++++
AICcmodavg-2.0-1/AICcmodavg/R/mb.gof.test.R |only
AICcmodavg-2.0-1/AICcmodavg/R/modavg.R | 768 +++++++++++++++++-
AICcmodavg-2.0-1/AICcmodavg/R/modavg.utility.R |only
AICcmodavg-2.0-1/AICcmodavg/R/modavgEffect.r | 136 +++
AICcmodavg-2.0-1/AICcmodavg/R/modavgPred.R | 128 ++-
AICcmodavg-2.0-1/AICcmodavg/R/modavgShrink.R | 338 +++++++
AICcmodavg-2.0-1/AICcmodavg/R/multComp.R |only
AICcmodavg-2.0-1/AICcmodavg/R/predictSE.R |only
AICcmodavg-2.0-1/AICcmodavg/inst/NEWS | 20
AICcmodavg-2.0-1/AICcmodavg/man/AICc.Rd | 40
AICcmodavg-2.0-1/AICcmodavg/man/AICcCustom.Rd |only
AICcmodavg-2.0-1/AICcmodavg/man/AICcmodavg-package.Rd | 38
AICcmodavg-2.0-1/AICcmodavg/man/DIC.Rd | 8
AICcmodavg-2.0-1/AICcmodavg/man/Nmix.gof.test.Rd | 45 -
AICcmodavg-2.0-1/AICcmodavg/man/aictab.Rd | 91 --
AICcmodavg-2.0-1/AICcmodavg/man/aictabCustom.Rd |only
AICcmodavg-2.0-1/AICcmodavg/man/boot.wt.Rd | 35
AICcmodavg-2.0-1/AICcmodavg/man/bullfrog.Rd | 2
AICcmodavg-2.0-1/AICcmodavg/man/calcium.Rd | 2
AICcmodavg-2.0-1/AICcmodavg/man/confset.Rd | 36
AICcmodavg-2.0-1/AICcmodavg/man/dictab.Rd | 7
AICcmodavg-2.0-1/AICcmodavg/man/evidence.Rd | 6
AICcmodavg-2.0-1/AICcmodavg/man/extractCN.Rd |only
AICcmodavg-2.0-1/AICcmodavg/man/extractLL.Rd | 18
AICcmodavg-2.0-1/AICcmodavg/man/extractSE.Rd | 9
AICcmodavg-2.0-1/AICcmodavg/man/fam.link.mer.Rd | 9
AICcmodavg-2.0-1/AICcmodavg/man/importance.Rd | 25
AICcmodavg-2.0-1/AICcmodavg/man/lizards.Rd | 4
AICcmodavg-2.0-1/AICcmodavg/man/mb.gof.test.Rd | 16
AICcmodavg-2.0-1/AICcmodavg/man/min.trap.Rd | 2
AICcmodavg-2.0-1/AICcmodavg/man/modavg.Rd | 113 +-
AICcmodavg-2.0-1/AICcmodavg/man/modavgCustom.Rd |only
AICcmodavg-2.0-1/AICcmodavg/man/modavgEffect.Rd | 65 -
AICcmodavg-2.0-1/AICcmodavg/man/modavgPred.Rd | 42
AICcmodavg-2.0-1/AICcmodavg/man/modavgShrink.Rd | 49 -
AICcmodavg-2.0-1/AICcmodavg/man/multComp.Rd | 60 -
AICcmodavg-2.0-1/AICcmodavg/man/predictSE.Rd | 35
AICcmodavg-2.0-1/AICcmodavg/man/salamander.Rd | 15
AICcmodavg-2.0-1/AICcmodavg/man/tortoise.Rd | 2
AICcmodavg-2.00/AICcmodavg/R/Nmix.gof.test.r |only
AICcmodavg-2.00/AICcmodavg/R/mb.gof.test.r |only
AICcmodavg-2.00/AICcmodavg/R/modavg.utility.r |only
AICcmodavg-2.00/AICcmodavg/R/multComp.r |only
AICcmodavg-2.00/AICcmodavg/R/predictSE.r |only
57 files changed, 3092 insertions(+), 484 deletions(-)
Title: Wrapper functions for GUESS
Diff between R2GUESS versions 1.4 dated 2014-10-16 and 1.5 dated 2014-10-17
Description: Wrapper functions for GUESS, a GPU-enabled sparse Bayesian variable
selection method for linear regression based analysis of possibly
multivariate/correlated outcomes.
Author: Gianluca Campanella [cre],
Benoit Liquet [aut],
Marc Chadeau-Hyam [aut],
Leonardo Bottolo [ctb],
Sylvia Richardson [ctb]
Maintainer: Gianluca Campanella
DESCRIPTION | 8 ++++----
MD5 | 6 +++---
R/wrapper.R | 2 +-
src/Main/GUESS.cc | 2 +-
4 files changed, 9 insertions(+), 9 deletions(-)
Title: Diagnostics plots for Bicluster Data
Diff between BcDiag versions 1.0.4 dated 2014-08-07 and 1.0.5 dated 2014-10-17
Description: This package provides Diagnostic tools based on two way
anova and median polish residual plots for Bicluster output
obtained from packages; "biclust" by Kaiser et al.(2008),"isa2"
by Csardi et al. (2010) and "fabia" by Hochreiter et al.
(2010). Moreover, It provides visualization tools for bicluster
output and corresponding non bicluster rows or columns
outcomes. It has also extended the idea of Kaiser et al.(2008)
which is, extracting bicluster output in a text format, by
adding by adding two bicluster methods from fabia and isa2 r
packages.
Author: Aregay Mengsteab, Martin Otava, Tatsiana Khamiakova, Ewoud De Troyer
Maintainer: Ewoud De Troyer
DESCRIPTION | 18 +++++++++++-------
MD5 | 8 ++++----
NAMESPACE | 3 +++
R/support.R | 27 ++++++++++++++++++++++++---
R/writeBic.R | 2 +-
5 files changed, 43 insertions(+), 15 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-04-09 1.0
Title: Two-locus Family-based Association Test with Polytomous Outcome
Diff between fat2Lpoly versions 1.0.2 dated 2014-04-02 and 1.1.1 dated 2014-10-17
Description: Performs family-based association tests with a polytomous outcome under 2-locus and 1-locus models defined by some design matrix.
Author: Alexandre BUREAU
Maintainer: Alexandre BUREAU
fat2Lpoly-1.0.2/fat2Lpoly/R/calcule.poids.r |only
fat2Lpoly-1.1.1/fat2Lpoly/DESCRIPTION | 13 -
fat2Lpoly-1.1.1/fat2Lpoly/MD5 | 25 +-
fat2Lpoly-1.1.1/fat2Lpoly/NAMESPACE | 2
fat2Lpoly-1.1.1/fat2Lpoly/R/calcule.poids.Chen.R |only
fat2Lpoly-1.1.1/fat2Lpoly/R/calcule.poids.alphafixe.r |only
fat2Lpoly-1.1.1/fat2Lpoly/R/fat2Lpoly.R | 6
fat2Lpoly-1.1.1/fat2Lpoly/R/fat2Lpoly.withinR.R | 4
fat2Lpoly-1.1.1/fat2Lpoly/R/scores.covs.R | 4
fat2Lpoly-1.1.1/fat2Lpoly/man/design.endo2disease.Rd | 5
fat2Lpoly-1.1.1/fat2Lpoly/man/design.full.Rd | 2
fat2Lpoly-1.1.1/fat2Lpoly/man/fat2Lpoly-internal.Rd | 3
fat2Lpoly-1.1.1/fat2Lpoly/man/fat2Lpoly.Rd | 15 -
fat2Lpoly-1.1.1/fat2Lpoly/man/fat2Lpoly.withinR.Rd | 10
fat2Lpoly-1.1.1/fat2Lpoly/man/read.merlin.files.Rd | 182 +++++++++---------
15 files changed, 141 insertions(+), 130 deletions(-)
Title: Extended Probability Distribution Functions
Diff between ExtDist versions 0.3.3 dated 2014-07-11 and 0.3.7 dated 2014-10-17
Description: The package provides a consistent, unified and extensible
framework for parameter estimation of probability distributions; it extends
parameter estimation procedures to allow for weighted samples; moreover, it
extends the gallery of available distributions.
Author: Haizhen Wu
Maintainer: Haizhen Wu
ExtDist-0.3.3/ExtDist/R/Beta.ab.R |only
ExtDist-0.3.3/ExtDist/man/Beta.ab.Rd |only
ExtDist-0.3.7/ExtDist/DESCRIPTION | 10
ExtDist-0.3.7/ExtDist/MD5 | 86
ExtDist-0.3.7/ExtDist/NAMESPACE | 121 +
ExtDist-0.3.7/ExtDist/R/Beta.R | 2
ExtDist-0.3.7/ExtDist/R/Beta_ab.R |only
ExtDist-0.3.7/ExtDist/R/Burr.R |only
ExtDist-0.3.7/ExtDist/R/DistSelCriteriaValues.R |only
ExtDist-0.3.7/ExtDist/R/Gamma.R |only
ExtDist-0.3.7/ExtDist/R/Gumbel.R |only
ExtDist-0.3.7/ExtDist/R/JohnsonSB.R |only
ExtDist-0.3.7/ExtDist/R/JohnsonSU.R |only
ExtDist-0.3.7/ExtDist/R/Logistic.R |only
ExtDist-0.3.7/ExtDist/R/Normal_sym_trunc_ab.R |only
ExtDist-0.3.7/ExtDist/R/Normal_trunc_ab.R |only
ExtDist-0.3.7/ExtDist/R/SRTB_ab.R |only
ExtDist-0.3.7/ExtDist/R/SSRTB.R |only
ExtDist-0.3.7/ExtDist/R/Triangular.R |only
ExtDist-0.3.7/ExtDist/R/Uniform.R |only
ExtDist-0.3.7/ExtDist/R/Weibull.R |only
ExtDist-0.3.7/ExtDist/R/bestDist.R |only
ExtDist-0.3.7/ExtDist/R/eDist.R | 47
ExtDist-0.3.7/ExtDist/R/wmle.R | 917 ++++------
ExtDist-0.3.7/ExtDist/build/vignette.rds |binary
ExtDist-0.3.7/ExtDist/inst/doc/Distributions-Beta.Rmd | 164 -
ExtDist-0.3.7/ExtDist/inst/doc/Distributions-Beta.html | 391 +---
ExtDist-0.3.7/ExtDist/inst/doc/Distributions-Normal.Rmd | 167 -
ExtDist-0.3.7/ExtDist/inst/doc/Distributions-Normal.html | 396 +---
ExtDist-0.3.7/ExtDist/inst/doc/Distributions.Rmd | 23
ExtDist-0.3.7/ExtDist/inst/doc/Distributions.html | 258 +-
ExtDist-0.3.7/ExtDist/inst/doc/ParaEst-and-DistSel-by-ExtDist.R |only
ExtDist-0.3.7/ExtDist/inst/doc/ParaEst-and-DistSel-by-ExtDist.Rmd |only
ExtDist-0.3.7/ExtDist/inst/doc/ParaEst-and-DistSel-by-ExtDist.pdf |only
ExtDist-0.3.7/ExtDist/man/Beta.Rd | 10
ExtDist-0.3.7/ExtDist/man/Beta_ab.Rd |only
ExtDist-0.3.7/ExtDist/man/Burr.Rd |only
ExtDist-0.3.7/ExtDist/man/DistSelCriteriaValues.Rd |only
ExtDist-0.3.7/ExtDist/man/ExtDist-package.Rd | 39
ExtDist-0.3.7/ExtDist/man/Gamma.Rd |only
ExtDist-0.3.7/ExtDist/man/Gumbel.Rd |only
ExtDist-0.3.7/ExtDist/man/JohnsonSB.Rd |only
ExtDist-0.3.7/ExtDist/man/JohnsonSU.Rd |only
ExtDist-0.3.7/ExtDist/man/Laplace.Rd | 14
ExtDist-0.3.7/ExtDist/man/Logistic.Rd |only
ExtDist-0.3.7/ExtDist/man/Normal.Rd | 14
ExtDist-0.3.7/ExtDist/man/Normal_sym_trunc_ab.Rd |only
ExtDist-0.3.7/ExtDist/man/Normal_trunc_ab.Rd |only
ExtDist-0.3.7/ExtDist/man/SRTB_ab.Rd |only
ExtDist-0.3.7/ExtDist/man/SSRTB.Rd |only
ExtDist-0.3.7/ExtDist/man/Triangular.Rd |only
ExtDist-0.3.7/ExtDist/man/Uniform.Rd |only
ExtDist-0.3.7/ExtDist/man/Weibull.Rd |only
ExtDist-0.3.7/ExtDist/man/bestDist.Rd |only
ExtDist-0.3.7/ExtDist/man/compareDist.Rd | 2
ExtDist-0.3.7/ExtDist/man/eDist.Rd | 20
ExtDist-0.3.7/ExtDist/man/eval.estimation.Rd | 2
ExtDist-0.3.7/ExtDist/man/wmle.Rd | 2
ExtDist-0.3.7/ExtDist/vignettes/Distributions-Beta.Rmd | 164 -
ExtDist-0.3.7/ExtDist/vignettes/Distributions-Normal.Rmd | 167 -
ExtDist-0.3.7/ExtDist/vignettes/Distributions.Rmd | 23
ExtDist-0.3.7/ExtDist/vignettes/ParaEst-and-DistSel-by-ExtDist.Rmd |only
ExtDist-0.3.7/ExtDist/vignettes/bibliography.bib |only
ExtDist-0.3.7/ExtDist/vignettes/header.tex |only
64 files changed, 1499 insertions(+), 1540 deletions(-)
Title: Semiparametric Bivariate Probit Modelling
Diff between SemiParBIVProbit versions 3.2-11 dated 2014-07-02 and 3.2-12 dated 2014-10-17
More information about SemiParBIVProbit at CRAN
Description: Routine for fitting bivariate probit models with semiparametric predictors (including linear and nonlinear effects) in the presence of correlated error equations, endogeneity, sample selection or partial observability. Bivariate copula models are also supported.
Author: Giampiero Marra
Maintainer: Giampiero Marra
SemiParBIVProbit-3.2-11/SemiParBIVProbit/R/bprobgHsBB.r |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/R/bprobgHsSSBB.r |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/R/bprobgHsSSPL.r |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/R/copgHsBB.r |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/R/residuals.SemiParBIVProbit.r |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/man/bprobgHsBB.Rd |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/man/bprobgHsSSBB.Rd |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/man/bprobgHsSSPL.Rd |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/man/copgHsBB.Rd |only
SemiParBIVProbit-3.2-11/SemiParBIVProbit/man/residuals.SemiParBIVProbit.Rd |only
SemiParBIVProbit-3.2-12/SemiParBIVProbit/ChangeLog | 5
SemiParBIVProbit-3.2-12/SemiParBIVProbit/DESCRIPTION | 14
SemiParBIVProbit-3.2-12/SemiParBIVProbit/MD5 | 102 --
SemiParBIVProbit-3.2-12/SemiParBIVProbit/NAMESPACE | 21
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/AT.r | 276 +----
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/LM.bpm.r | 428 ++------
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/SemiParBIVProbit.fit.R | 74 -
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/SemiParBIVProbit.fit.post.r | 193 +---
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/SemiParBIVProbit.r | 347 ++++---
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/VuongClarke.bcm.r | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/adjCov.r | 4
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/adjCovSD.r | 5
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/bprobgHs.r | 206 +++-
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/bprobgHsPL.r | 482 +++++++++-
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/bprobgHsPO.r |only
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/bprobgHsSS.r | 127 +-
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/copgHs.r | 29
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/est.prev.r | 20
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/gt.bpm.R | 28
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/plot.SemiParBIVProbit.r | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/predict.SemiParBIVProbit.r | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/print.AT.r | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/print.SemiParBIVProbit.r | 35
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/print.est.prev.r | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/print.summary.SemiParBIVProbit.r | 39
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/sem.checks.r | 12
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/summary.SemiParBIVProbit.r | 114 +-
SemiParBIVProbit-3.2-12/SemiParBIVProbit/R/working.comp.r | 79 +
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/AT.Rd | 3
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/LM.bpm.Rd | 38
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/S.m.Rd | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/S.mPL.Rd | 3
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/SemiParBIVProbit-package.Rd | 35
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/SemiParBIVProbit.Rd | 247 +++--
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/SemiParBIVProbitObject.Rd | 18
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/VuongClarke.bcm.Rd | 19
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/bprobgHs.Rd | 5
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/bprobgHsPL.Rd | 14
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/bprobgHsPO.Rd |only
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/bprobgHsSS.Rd | 8
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/copgHs.Rd | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/est.prev.Rd | 6
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/gt.bpm.Rd | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/plot.SemiParBIVProbit.Rd | 4
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/predict.SemiParBIVProbit.Rd | 10
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/print.summary.SemiParBIVProbit.Rd | 2
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/summary.SemiParBIVProbit.Rd | 16
SemiParBIVProbit-3.2-12/SemiParBIVProbit/man/working.comp.Rd | 2
58 files changed, 1694 insertions(+), 1392 deletions(-)
Permanent link
Title: Unified handling of graphics devices
Diff between R.devices versions 2.11.0 dated 2014-09-02 and 2.12.0 dated 2014-10-17
Description: This package provides functions for creating plots and image files in a unified way regardless of output format (EPS, PDF, PNG, SVG, TIFF, WMF, etc.). Default device options as well as scales and aspect ratios are controlled in a uniform way across all device types. Switching output format requires minimal changes in code. This package is ideal for large-scale batch processing, because it will never leave open graphics devices or incomplete image files behind, even on errors or user interrupts.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson
DESCRIPTION | 14 -
MD5 | 56 ++++---
NAMESPACE | 10 +
NEWS | 72 +++++++++
R/DevEvalProduct.R | 79 +++++++---
R/devEval.R | 25 ++-
R/devNew.R | 7
R/devOptions.R | 158 ++++++++++++++++-----
R/deviceUtils.R | 254 +++++++++++++++++++++++++++++++++--
R/favicon.R |only
R/toNNN.R | 2
R/withPar.R | 21 ++
R/zzz.R | 3
build/vignette.rds |binary
inst/doc/R.devices-overview.R | 4
inst/doc/R.devices-overview.pdf |binary
inst/doc/R.devices-overview.tex.rsp | 14 +
man/DevEvalFileProduct.Rd | 1
man/R.devices-package.Rd | 2
man/devEval.Rd | 9 -
man/devOptions.Rd | 9 -
man/favicon.Rd |only
man/getDataURI.DevEvalFileProduct.Rd | 9 -
man/toNNN.Rd | 33 ++--
man/withPar.Rd | 7
tests/DevEvalFileProduct.R | 3
tests/dataURI.R | 4
tests/devAll.R |only
tests/devOptions.R |only
tests/withPar.R | 10 +
vignettes/R.devices-overview.tex.rsp | 14 +
31 files changed, 660 insertions(+), 160 deletions(-)
Title: Co-Information based N-Order Epistasis Detector and Visualizer
Diff between CINOEDV versions 1.0 dated 2014-07-05 and 1.1 dated 2014-10-17
Description: A package for detecting and visualizing high-order epistatic interactions
Author: Junliang Shang
Maintainer: Junliang Shang
DESCRIPTION | 8 ++++----
MD5 | 4 ++--
R/TestSNPNameFile.R | 4 ++--
3 files changed, 8 insertions(+), 8 deletions(-)