Title: Community Ecology Package
Diff between vegan versions 2.0-10 dated 2013-12-12 and 2.2-0 dated 2014-11-17
Description: Ordination methods, diversity analysis and other
functions for community and vegetation ecologists.
Author: Jari Oksanen, F. Guillaume Blanchet, Roeland Kindt, Pierre Legendre,
Peter R. Minchin, R. B. O'Hara, Gavin L. Simpson, Peter Solymos,
M. Henry H. Stevens, Helene Wagner
Maintainer: Jari Oksanen
vegan-2.0-10/vegan/R/anova.ccabyaxis.R |only
vegan-2.0-10/vegan/R/anova.ccabymargin.R |only
vegan-2.0-10/vegan/R/commsimulator.R |only
vegan-2.0-10/vegan/R/density.anosim.R |only
vegan-2.0-10/vegan/R/density.oecosimu.R |only
vegan-2.0-10/vegan/R/densityplot.oecosimu.R |only
vegan-2.0-10/vegan/R/ordiplot3d.R |only
vegan-2.0-10/vegan/R/ordirgl.R |only
vegan-2.0-10/vegan/R/orglpoints.R |only
vegan-2.0-10/vegan/R/orglsegments.R |only
vegan-2.0-10/vegan/R/orglspider.R |only
vegan-2.0-10/vegan/R/orgltext.R |only
vegan-2.0-10/vegan/R/rgl.isomap.R |only
vegan-2.0-10/vegan/R/rgl.renyiaccum.R |only
vegan-2.0-10/vegan/man/density.adonis.Rd |only
vegan-2.0-10/vegan/man/ordiplot3d.Rd |only
vegan-2.2-0/vegan/DESCRIPTION | 16
vegan-2.2-0/vegan/MD5 | 458 ++---
vegan-2.2-0/vegan/NAMESPACE | 151 +
vegan-2.2-0/vegan/R/CCorA.R | 39
vegan-2.2-0/vegan/R/MDSrotate.R | 56
vegan-2.2-0/vegan/R/RsquareAdj.R | 13
vegan-2.2-0/vegan/R/SSarrhenius.R | 2
vegan-2.2-0/vegan/R/add1.cca.R | 15
vegan-2.2-0/vegan/R/ade2vegancca.R | 7
vegan-2.2-0/vegan/R/adipart.default.R | 2
vegan-2.2-0/vegan/R/adonis.R | 70
vegan-2.2-0/vegan/R/anosim.R | 53
vegan-2.2-0/vegan/R/anova.cca.R | 109 -
vegan-2.2-0/vegan/R/anova.ccabyterm.R | 233 +-
vegan-2.2-0/vegan/R/anova.ccalist.R |only
vegan-2.2-0/vegan/R/as.hclust.spantree.R |only
vegan-2.2-0/vegan/R/as.ts.oecosimu.R | 6
vegan-2.2-0/vegan/R/as.ts.permat.R | 4
vegan-2.2-0/vegan/R/betadisper.R | 4
vegan-2.2-0/vegan/R/bioenv.default.R | 97 -
vegan-2.2-0/vegan/R/bioenv.formula.R | 7
vegan-2.2-0/vegan/R/biplot.CCorA.R | 8
vegan-2.2-0/vegan/R/biplot.rda.R | 4
vegan-2.2-0/vegan/R/bstick.cca.R | 2
vegan-2.2-0/vegan/R/cIndexKM.R | 6
vegan-2.2-0/vegan/R/capscale.R | 12
vegan-2.2-0/vegan/R/cca.default.R | 20
vegan-2.2-0/vegan/R/clamtest.R | 254 +-
vegan-2.2-0/vegan/R/commsim.R |only
vegan-2.2-0/vegan/R/confint.MOStest.R | 1
vegan-2.2-0/vegan/R/contribdiv.R | 104 -
vegan-2.2-0/vegan/R/decorana.R | 4
vegan-2.2-0/vegan/R/dispweight.R |only
vegan-2.2-0/vegan/R/drop1.cca.R | 8
vegan-2.2-0/vegan/R/envfit.default.R | 26
vegan-2.2-0/vegan/R/envfit.formula.R | 2
vegan-2.2-0/vegan/R/estimateR.default.R | 26
vegan-2.2-0/vegan/R/eventstar.R | 36
vegan-2.2-0/vegan/R/factorfit.R | 34
vegan-2.2-0/vegan/R/fitspecaccum.R | 22
vegan-2.2-0/vegan/R/fitted.radfit.R | 8
vegan-2.2-0/vegan/R/gdispweight.R |only
vegan-2.2-0/vegan/R/getPermuteMatrix.R |only
vegan-2.2-0/vegan/R/goodness.metaMDS.R | 1
vegan-2.2-0/vegan/R/hiersimu.default.R | 2
vegan-2.2-0/vegan/R/howHead.R |only
vegan-2.2-0/vegan/R/indpower.R | 50
vegan-2.2-0/vegan/R/make.commsim.R |only
vegan-2.2-0/vegan/R/mantel.R | 54
vegan-2.2-0/vegan/R/mantel.partial.R | 40
vegan-2.2-0/vegan/R/metaMDSiter.R | 121 +
vegan-2.2-0/vegan/R/mrpp.R | 64
vegan-2.2-0/vegan/R/mso.R | 31
vegan-2.2-0/vegan/R/multipart.default.R | 2
vegan-2.2-0/vegan/R/nestedchecker.R | 1
vegan-2.2-0/vegan/R/nesteddisc.R | 6
vegan-2.2-0/vegan/R/nestedn0.R | 1
vegan-2.2-0/vegan/R/nestednodf.R | 18
vegan-2.2-0/vegan/R/nestedtemp.R | 1
vegan-2.2-0/vegan/R/nullmodel.R |only
vegan-2.2-0/vegan/R/oecosimu.R | 226 +-
vegan-2.2-0/vegan/R/ordiR2step.R | 6
vegan-2.2-0/vegan/R/ordiareatest.R |only
vegan-2.2-0/vegan/R/ordiellipse.R | 4
vegan-2.2-0/vegan/R/ordihull.R | 2
vegan-2.2-0/vegan/R/ordilabel.R | 10
vegan-2.2-0/vegan/R/ordipointlabel.R | 2
vegan-2.2-0/vegan/R/ordispider.R | 24
vegan-2.2-0/vegan/R/ordistep.R | 20
vegan-2.2-0/vegan/R/ordisurf.R | 15
vegan-2.2-0/vegan/R/permatfull.R | 95 -
vegan-2.2-0/vegan/R/permatswap.R | 168 -
vegan-2.2-0/vegan/R/permustats.R |only
vegan-2.2-0/vegan/R/permuted.index.R | 1
vegan-2.2-0/vegan/R/permutest.betadisper.R | 158 +
vegan-2.2-0/vegan/R/permutest.cca.R | 138 +
vegan-2.2-0/vegan/R/persp.tsallisaccum.R | 10
vegan-2.2-0/vegan/R/plot.cca.R | 58
vegan-2.2-0/vegan/R/plot.clamtest.R | 78
vegan-2.2-0/vegan/R/plot.contribdiv.R | 44
vegan-2.2-0/vegan/R/plot.envfit.R | 14
vegan-2.2-0/vegan/R/plot.spantree.R | 2
vegan-2.2-0/vegan/R/points.cca.R | 2
vegan-2.2-0/vegan/R/poolaccum.R | 6
vegan-2.2-0/vegan/R/print.CCorA.R | 6
vegan-2.2-0/vegan/R/print.anosim.R | 8
vegan-2.2-0/vegan/R/print.bioenv.R | 7
vegan-2.2-0/vegan/R/print.cca.R | 6
vegan-2.2-0/vegan/R/print.commsim.R |only
vegan-2.2-0/vegan/R/print.factorfit.R | 7
vegan-2.2-0/vegan/R/print.mantel.R | 6
vegan-2.2-0/vegan/R/print.mantel.correlog.R | 16
vegan-2.2-0/vegan/R/print.mrpp.R | 11
vegan-2.2-0/vegan/R/print.mso.R | 4
vegan-2.2-0/vegan/R/print.nullmodel.R |only
vegan-2.2-0/vegan/R/print.oecosimu.R | 16
vegan-2.2-0/vegan/R/print.permat.R | 10
vegan-2.2-0/vegan/R/print.permutest.betadisper.R | 4
vegan-2.2-0/vegan/R/print.permutest.cca.R | 9
vegan-2.2-0/vegan/R/print.protest.R | 10
vegan-2.2-0/vegan/R/print.simmat.R |only
vegan-2.2-0/vegan/R/print.specaccum.R | 9
vegan-2.2-0/vegan/R/print.summary.clamtest.R | 26
vegan-2.2-0/vegan/R/print.summary.permat.R | 8
vegan-2.2-0/vegan/R/print.vectorfit.R | 5
vegan-2.2-0/vegan/R/protest.R | 46
vegan-2.2-0/vegan/R/radfit.data.frame.R | 6
vegan-2.2-0/vegan/R/rankindex.R | 12
vegan-2.2-0/vegan/R/rarecurve.R | 14
vegan-2.2-0/vegan/R/raupcrick.R | 5
vegan-2.2-0/vegan/R/rda.default.R | 28
vegan-2.2-0/vegan/R/read.cep.R | 6
vegan-2.2-0/vegan/R/scores.default.R | 16
vegan-2.2-0/vegan/R/scores.lda.R | 1
vegan-2.2-0/vegan/R/simper.R | 95 -
vegan-2.2-0/vegan/R/simulate.nullmodel.R |only
vegan-2.2-0/vegan/R/simulate.rda.R | 155 +
vegan-2.2-0/vegan/R/specpool.R | 19
vegan-2.2-0/vegan/R/str.nullmodel.R |only
vegan-2.2-0/vegan/R/stressplot.R | 12
vegan-2.2-0/vegan/R/stressplot.wcmdscale.R |only
vegan-2.2-0/vegan/R/summary.clamtest.R | 14
vegan-2.2-0/vegan/R/summary.dispweight.R |only
vegan-2.2-0/vegan/R/summary.permat.R | 6
vegan-2.2-0/vegan/R/tabasco.R | 62
vegan-2.2-0/vegan/R/text.cca.R | 9
vegan-2.2-0/vegan/R/tolerance.cca.R | 2
vegan-2.2-0/vegan/R/treedist.R | 2
vegan-2.2-0/vegan/R/treedive.R | 8
vegan-2.2-0/vegan/R/tsallis.R | 88 -
vegan-2.2-0/vegan/R/tsallisaccum.R | 96 -
vegan-2.2-0/vegan/R/update.nullmodel.R |only
vegan-2.2-0/vegan/R/vectorfit.R | 32
vegan-2.2-0/vegan/R/vegan-defunct.R | 10
vegan-2.2-0/vegan/R/vegan-deprecated.R | 206 ++
vegan-2.2-0/vegan/R/veganCovEllipse.R | 5
vegan-2.2-0/vegan/R/veganMahatrans.R |only
vegan-2.2-0/vegan/R/vegdist.R | 5
vegan-2.2-0/vegan/R/vegemite.R | 1
vegan-2.2-0/vegan/README.md |only
vegan-2.2-0/vegan/build/vignette.rds |binary
vegan-2.2-0/vegan/data/BCI.rda |binary
vegan-2.2-0/vegan/data/dune.env.rda |binary
vegan-2.2-0/vegan/data/dune.phylodis.rda |only
vegan-2.2-0/vegan/data/dune.rda |binary
vegan-2.2-0/vegan/data/dune.taxon.rda |binary
vegan-2.2-0/vegan/data/varespec.rda |binary
vegan-2.2-0/vegan/inst/ChangeLog | 1976 +++++++++++++++++++----
vegan-2.2-0/vegan/inst/NEWS.Rd | 284 +++
vegan-2.2-0/vegan/inst/doc/FAQ-vegan.pdf |binary
vegan-2.2-0/vegan/inst/doc/NEWS.html | 391 ++++
vegan-2.2-0/vegan/inst/doc/decision-vegan.R | 56
vegan-2.2-0/vegan/inst/doc/decision-vegan.Rnw | 197 ++
vegan-2.2-0/vegan/inst/doc/decision-vegan.pdf |binary
vegan-2.2-0/vegan/inst/doc/diversity-vegan.R | 12
vegan-2.2-0/vegan/inst/doc/diversity-vegan.Rnw | 55
vegan-2.2-0/vegan/inst/doc/diversity-vegan.pdf |binary
vegan-2.2-0/vegan/inst/doc/intro-vegan.R | 25
vegan-2.2-0/vegan/inst/doc/intro-vegan.Rnw | 34
vegan-2.2-0/vegan/inst/doc/intro-vegan.pdf |binary
vegan-2.2-0/vegan/man/BCI.Rd | 31
vegan-2.2-0/vegan/man/CCorA.Rd | 14
vegan-2.2-0/vegan/man/MDSrotate.Rd | 30
vegan-2.2-0/vegan/man/add1.cca.Rd | 13
vegan-2.2-0/vegan/man/adipart.Rd | 14
vegan-2.2-0/vegan/man/adonis.Rd | 23
vegan-2.2-0/vegan/man/anosim.Rd | 19
vegan-2.2-0/vegan/man/anova.cca.Rd | 218 +-
vegan-2.2-0/vegan/man/betadisper.Rd | 13
vegan-2.2-0/vegan/man/bioenv.Rd | 67
vegan-2.2-0/vegan/man/cca.object.Rd | 29
vegan-2.2-0/vegan/man/clamtest.Rd | 301 +--
vegan-2.2-0/vegan/man/commsim.Rd |only
vegan-2.2-0/vegan/man/decostand.Rd | 5
vegan-2.2-0/vegan/man/dispweight.Rd |only
vegan-2.2-0/vegan/man/diversity.Rd | 8
vegan-2.2-0/vegan/man/dune.Rd | 15
vegan-2.2-0/vegan/man/dune.taxon.Rd | 48
vegan-2.2-0/vegan/man/envfit.Rd | 17
vegan-2.2-0/vegan/man/eventstar.Rd | 248 +-
vegan-2.2-0/vegan/man/goodness.cca.Rd | 6
vegan-2.2-0/vegan/man/goodness.metaMDS.Rd | 8
vegan-2.2-0/vegan/man/humpfit.Rd | 2
vegan-2.2-0/vegan/man/isomap.Rd | 17
vegan-2.2-0/vegan/man/mantel.Rd | 20
vegan-2.2-0/vegan/man/mantel.correlog.Rd | 344 ++--
vegan-2.2-0/vegan/man/metaMDS.Rd | 11
vegan-2.2-0/vegan/man/monoMDS.Rd | 4
vegan-2.2-0/vegan/man/mrpp.Rd | 21
vegan-2.2-0/vegan/man/mso.Rd | 13
vegan-2.2-0/vegan/man/multipart.Rd | 8
vegan-2.2-0/vegan/man/nestedtemp.Rd | 23
vegan-2.2-0/vegan/man/nullmodel.Rd |only
vegan-2.2-0/vegan/man/oecosimu.Rd | 366 ++--
vegan-2.2-0/vegan/man/ordihull.Rd | 33
vegan-2.2-0/vegan/man/ordistep.Rd | 16
vegan-2.2-0/vegan/man/ordisurf.Rd | 30
vegan-2.2-0/vegan/man/orditkplot.Rd | 2
vegan-2.2-0/vegan/man/pcnm.Rd | 228 +-
vegan-2.2-0/vegan/man/permatfull.Rd | 574 +++---
vegan-2.2-0/vegan/man/permustats.Rd |only
vegan-2.2-0/vegan/man/permutations.Rd | 257 ++
vegan-2.2-0/vegan/man/permutest.betadisper.Rd | 20
vegan-2.2-0/vegan/man/prc.Rd | 13
vegan-2.2-0/vegan/man/procrustes.Rd | 23
vegan-2.2-0/vegan/man/rankindex.Rd | 35
vegan-2.2-0/vegan/man/raupcrick.Rd | 4
vegan-2.2-0/vegan/man/renyi.Rd | 19
vegan-2.2-0/vegan/man/reorder.hclust.Rd |only
vegan-2.2-0/vegan/man/simper.Rd | 24
vegan-2.2-0/vegan/man/simulate.rda.Rd | 88 -
vegan-2.2-0/vegan/man/spantree.Rd | 13
vegan-2.2-0/vegan/man/specaccum.Rd | 42
vegan-2.2-0/vegan/man/specpool.Rd | 88 -
vegan-2.2-0/vegan/man/stressplot.wcmdscale.Rd |only
vegan-2.2-0/vegan/man/treedive.Rd | 62
vegan-2.2-0/vegan/man/tsallis.Rd | 268 +--
vegan-2.2-0/vegan/man/vegan-defunct.Rd | 36
vegan-2.2-0/vegan/man/vegan-deprecated.Rd | 189 ++
vegan-2.2-0/vegan/man/vegan-internal.Rd | 32
vegan-2.2-0/vegan/man/vegandocs.Rd | 10
vegan-2.2-0/vegan/man/vegdist.Rd | 20
vegan-2.2-0/vegan/man/vegemite.Rd | 12
vegan-2.2-0/vegan/man/wcmdscale.Rd | 4
vegan-2.2-0/vegan/src/nestedness.c | 214 +-
vegan-2.2-0/vegan/src/vegdist.c | 6
vegan-2.2-0/vegan/vignettes/FAQ-vegan.pdf |binary
vegan-2.2-0/vegan/vignettes/FAQ-vegan.texi | 252 +-
vegan-2.2-0/vegan/vignettes/NEWS.html | 391 ++++
vegan-2.2-0/vegan/vignettes/decision-vegan.Rnw | 197 ++
vegan-2.2-0/vegan/vignettes/decision-vegan.tex | 249 ++
vegan-2.2-0/vegan/vignettes/diversity-vegan.Rnw | 55
vegan-2.2-0/vegan/vignettes/diversity-vegan.tex | 135 -
vegan-2.2-0/vegan/vignettes/intro-vegan.Rnw | 34
vegan-2.2-0/vegan/vignettes/intro-vegan.tex | 174 +-
vegan-2.2-0/vegan/vignettes/vegan.bib | 10
252 files changed, 8985 insertions(+), 4383 deletions(-)
Title: Sparklines and graphical tables for tex and html
Diff between sparkTable versions 0.11.0 dated 2014-07-01 and 0.12.0 dated 2014-11-17
Description: Create Sparklines and graphical tables for documents and websites
Author: Alexander Kowarik, Bernhard Meindl, Matthias Templ
Maintainer: Alexander Kowarik
sparkTable-0.11.0/sparkTable/R/runShinyApp.R |only
sparkTable-0.11.0/sparkTable/R/shiny_sparkTable.R |only
sparkTable-0.11.0/sparkTable/man/plotGeoTable.Rd |only
sparkTable-0.11.0/sparkTable/man/plotSparkTable.Rd |only
sparkTable-0.11.0/sparkTable/man/plotSparks.Rd |only
sparkTable-0.11.0/sparkTable/man/runShinyApp-methods.Rd |only
sparkTable-0.11.0/sparkTable/man/shiny_sparkTable-methods.Rd |only
sparkTable-0.12.0/sparkTable/DESCRIPTION | 16
sparkTable-0.12.0/sparkTable/MD5 | 59
sparkTable-0.12.0/sparkTable/NAMESPACE | 11
sparkTable-0.12.0/sparkTable/R/classes.r | 365 +-
sparkTable-0.12.0/sparkTable/R/customizeSparkTable.R |only
sparkTable-0.12.0/sparkTable/R/exports.r | 298 --
sparkTable-0.12.0/sparkTable/R/methods.r | 1435 +++++-----
sparkTable-0.12.0/sparkTable/R/optimal_grid_allocation.R | 27
sparkTable-0.12.0/sparkTable/R/showSparkTable.R |only
sparkTable-0.12.0/sparkTable/R/zzz.R |only
sparkTable-0.12.0/sparkTable/README | 4
sparkTable-0.12.0/sparkTable/data/AT_Soccer.RData |only
sparkTable-0.12.0/sparkTable/inst/shinystuff/shinypara_server.R | 25
sparkTable-0.12.0/sparkTable/inst/shinystuff/shinypara_ui.R | 2
sparkTable-0.12.0/sparkTable/man/brp.Rd | 3
sparkTable-0.12.0/sparkTable/man/checkerplot.Rd | 38
sparkTable-0.12.0/sparkTable/man/customizeSparkTable.Rd |only
sparkTable-0.12.0/sparkTable/man/export.Rd |only
sparkTable-0.12.0/sparkTable/man/geoTable-class.Rd | 5
sparkTable-0.12.0/sparkTable/man/newGeoTable.Rd | 48
sparkTable-0.12.0/sparkTable/man/newSparkBar.Rd | 50
sparkTable-0.12.0/sparkTable/man/newSparkTable.Rd | 55
sparkTable-0.12.0/sparkTable/man/optimal_grid_allocation.Rd | 10
sparkTable-0.12.0/sparkTable/man/plot.Rd |only
sparkTable-0.12.0/sparkTable/man/reshapeExt.Rd | 28
sparkTable-0.12.0/sparkTable/man/showSparkTable.Rd |only
sparkTable-0.12.0/sparkTable/man/sparkTable-class.Rd | 2
sparkTable-0.12.0/sparkTable/man/sparkbar-class.Rd | 2
sparkTable-0.12.0/sparkTable/man/sparkbox-class.Rd | 2
sparkTable-0.12.0/sparkTable/man/sparkline-class.Rd | 2
sparkTable-0.12.0/sparkTable/man/summaryST.Rd | 19
38 files changed, 1293 insertions(+), 1213 deletions(-)
Title: Reverse correlation image classification toolbox
Diff between rcicr versions 0.2.4 dated 2014-09-30 and 0.2.5 dated 2014-11-17
Description: Functions to generate stimuli and analyze data of reverse correlation image classification experiments.
Author: Ron Dotsch
Maintainer: Ron Dotsch
ChangeLog | 6 ++++++
DESCRIPTION | 12 ++++++------
MD5 | 10 +++++-----
R/rcicr_2IFC.R | 11 ++++++-----
man/batchGenerateCI2IFC.Rd | 6 ++----
man/rcicr-package.Rd | 4 ++--
6 files changed, 27 insertions(+), 22 deletions(-)
Title: Graph estimation based on birth-death MCMC approach
Diff between BDgraph versions 2.12 dated 2014-09-24 and 2.13 dated 2014-11-17
Description: This package provides a Bayesian methodology for structure learning in undirected graphical models. Our Bayesian methodology is based on birth-death Markov chain Monte Carlo (BDMCMC) algorithm which is the main function with the name 'bdgraph'. The main target of this package is high-dimensional data analysis wherein usually p >> n. The computation is memory-optimized using the sparse matrix output.
Author: Abdolreza Mohammadi and Ernst Wit
Maintainer: Abdolreza Mohammadi
DESCRIPTION | 6
MD5 | 8
R/BDgraph.R | 796 +----------------------------------------------------
R/bdgraph_select.R |only
R/bdgraph_sim.R |only
R/rgwish.R |only
R/roc.R |only
7 files changed, 27 insertions(+), 783 deletions(-)
Title: Cross-Validated Area Under the ROC Curve Confidence Intervals
Diff between cvAUC versions 1.0.1 dated 2014-11-04 and 1.0.2 dated 2014-11-17
Description: This package contains various tools for working with and evaluating cross-validated area under the ROC curve (AUC) estimators. The primary functions of the package are ci.cvAUC and ci.pooled.cvAUC, which report cross-validated AUC and compute confidence intervals for cross-validated AUC estimates based on influence curves for i.i.d. and pooled repeated measures data, respectively. One benefit to using influence curve based confidence intervals is that they require much less computation time than bootstrapping methods. The utility functions, AUC and cvAUC, are simple wrappers for functions from the ROCR package.
Author: Erin LeDell, Maya Petersen, Mark van der Laan
Maintainer: Erin LeDell
DESCRIPTION | 10 +++++-----
MD5 | 20 ++++++++++----------
NEWS | 9 ++++++++-
R/AUC.R | 27 ++++++---------------------
R/ci.cvAUC.R | 6 ++++--
R/ci.pooled.cvAUC.R | 28 +++++++++++++++-------------
R/cvAUC.R | 6 ++++--
R/internals.R | 11 ++++++++++-
man/AUC.Rd | 7 +++++--
man/ci.pooled.cvAUC.Rd | 4 ++--
man/cvAUC-package.Rd | 13 ++++++++-----
11 files changed, 77 insertions(+), 64 deletions(-)
Title: Random Effects Latent Class Analysis
Diff between randomLCA versions 1.0-0 dated 2014-10-14 and 1.0-1 dated 2014-11-17
Description: Fits random effects latent class models, as well as standard latent class models.
Author: Ken Beath
Maintainer: Ken Beath
DESCRIPTION | 8
MD5 | 39 -
R/outcome.probs.randomLCA.R | 1
R/randomLCA.R | 26
build/vignette.rds |binary
inst/NEWS | 10
inst/doc/randomLCA-example.Rnw | 38 -
inst/doc/randomLCA-example.pdf |binary
man/AIC.Rd | 3
man/BIC.Rd | 3
man/class.probs.Rd | 46 -
man/hivtests.Rd | 7
man/logLik.Rd | 3
man/post.class.probs.Rd | 48 -
man/randomLCA.Rd | 152 ++--
man/refit.Rd | 3
man/summary.Rd | 3
man/uterinecarcinoma.Rd | 85 +-
vignettes/randomLCA-example.Rnw | 38 -
vignettes/randomLCA-example.tex |only
vignettes/randomLCA-exampleTex.tex | 1129 +++++++++++++++++++------------------
21 files changed, 858 insertions(+), 784 deletions(-)