Title: Meta-Analysis with R
Diff between meta versions 4.0-1 dated 2014-11-19 and 4.0-2 dated 2014-12-06
Description: User-friendly general package providing standard methods for meta-analysis:
- fixed effect and random effects meta-analysis;
- several plots (forest, funnel, Galbraith / radial, L'Abbe, Baujat, bubble);
- statistical tests and trim-and-fill method to evaluate bias in meta-analysis;
- import data from RevMan 5;
- prediction interval, Hartung-Knapp and Paule-Mandel method for random effects model;
- cumulative meta-analysis and leave-one-out meta-analysis;
- meta-regression (if R package metafor is installed).
Author: Guido Schwarzer [cre, aut]
Maintainer: Guido Schwarzer
DESCRIPTION | 8 ++++----
MD5 | 40 ++++++++++++++++++++--------------------
NEWS | 47 +++++++++++++++++++++++++++++++----------------
R/catmeth.R | 4 ++--
R/labbe.default.R | 5 +++--
R/labbe.metabin.R | 6 +++---
R/metabin.R | 23 +++++++++++++++--------
R/metacont.R | 6 +++---
R/metacor.R | 6 +++---
R/metagen.R | 6 +++---
R/metainc.R | 8 +++++---
R/metaprop.R | 6 +++---
R/settings.meta.R | 2 +-
R/subgroup.R | 4 ++--
R/xlab.R | 4 ++--
man/funnel.Rd | 2 +-
man/metabias.Rd | 4 ++--
man/metabin.Rd | 33 +++++++++++++++++++++------------
man/metacr.Rd | 2 +-
man/metagen.Rd | 2 +-
man/trimfill.Rd | 2 +-
21 files changed, 127 insertions(+), 93 deletions(-)
Title: CITation ANalysis Toolpack
Diff between CITAN versions 2011.08-1 dated 2011-08-12 and 2014.12-1 dated 2014-12-06
Description: Supports quantitative
research in scientometrics and bibliometrics. Provides
various tools for preprocessing bibliographic
data retrieved e.g. from Elsevier's SciVerse Scopus,
calculating bibliometric impact of individuals
or modeling many phenomena encountered in the social sciences.
Author: Marek Gagolewski [aut, cre]
Maintainer: Marek Gagolewski
CITAN-2011.08-1/CITAN/LICENSE |only
CITAN-2011.08-1/CITAN/R/biblio.duplicates.R |only
CITAN-2011.08-1/CITAN/R/distrib_hirsch.R |only
CITAN-2011.08-1/CITAN/R/distrib_p2.R |only
CITAN-2011.08-1/CITAN/R/distrib_sstat.R |only
CITAN-2011.08-1/CITAN/R/dp2.estimate.R |only
CITAN-2011.08-1/CITAN/R/dp2.goftest.R |only
CITAN-2011.08-1/CITAN/R/impact_functions.R |only
CITAN-2011.08-1/CITAN/R/impact_visualization.R |only
CITAN-2011.08-1/CITAN/R/p2.confint.h.R |only
CITAN-2011.08-1/CITAN/R/p2.confint.rho.R |only
CITAN-2011.08-1/CITAN/R/p2.confint.rho.approx.R |only
CITAN-2011.08-1/CITAN/R/p2.estimate.R |only
CITAN-2011.08-1/CITAN/R/p2.ftest.R |only
CITAN-2011.08-1/CITAN/R/p2.goftest.R |only
CITAN-2011.08-1/CITAN/R/p2.htest.R |only
CITAN-2011.08-1/CITAN/R/p2.htest.approx.R |only
CITAN-2011.08-1/CITAN/R/rho.R |only
CITAN-2011.08-1/CITAN/inst/LICENSE |only
CITAN-2011.08-1/CITAN/inst/doc |only
CITAN-2011.08-1/CITAN/man/Sstat.Rd |only
CITAN-2011.08-1/CITAN/man/Sstat2.Rd |only
CITAN-2011.08-1/CITAN/man/curve.add.lp.Rd |only
CITAN-2011.08-1/CITAN/man/curve.add.rp.Rd |only
CITAN-2011.08-1/CITAN/man/dhirsch.Rd |only
CITAN-2011.08-1/CITAN/man/discrpareto2.goftest.Rd |only
CITAN-2011.08-1/CITAN/man/discrpareto2.mlekestimate.Rd |only
CITAN-2011.08-1/CITAN/man/discrpareto2.mleksestimate.Rd |only
CITAN-2011.08-1/CITAN/man/dpareto2.Rd |only
CITAN-2011.08-1/CITAN/man/dsstat.Rd |only
CITAN-2011.08-1/CITAN/man/index.g.Rd |only
CITAN-2011.08-1/CITAN/man/index.h.Rd |only
CITAN-2011.08-1/CITAN/man/index.lp.Rd |only
CITAN-2011.08-1/CITAN/man/index.rp.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.h.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.h.lower.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.h.upper.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.rho.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.rho.approx.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.rho.approx.lower.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.rho.approx.upper.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.rho.lower.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.confint.rho.upper.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.dhirsch.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.ftest.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.goftest.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.htest.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.htest.approx.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.mlekestimate.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.mleksestimate.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.phirsch.Rd |only
CITAN-2011.08-1/CITAN/man/pareto2.zsestimate.Rd |only
CITAN-2011.08-1/CITAN/man/phirsch.Rd |only
CITAN-2011.08-1/CITAN/man/plot.citfun.Rd |only
CITAN-2011.08-1/CITAN/man/ppareto2.Rd |only
CITAN-2011.08-1/CITAN/man/psstat.Rd |only
CITAN-2011.08-1/CITAN/man/qpareto2.Rd |only
CITAN-2011.08-1/CITAN/man/rho.get.Rd |only
CITAN-2011.08-1/CITAN/man/rpareto2.Rd |only
CITAN-2011.08-1/CITAN/man/sqlEscape.Rd |only
CITAN-2011.08-1/CITAN/man/sqlEscapeTrim.Rd |only
CITAN-2011.08-1/CITAN/man/sqlNumericOrNULL.Rd |only
CITAN-2011.08-1/CITAN/man/sqlStringOrNULL.Rd |only
CITAN-2011.08-1/CITAN/man/sqlSwitchOrNULL.Rd |only
CITAN-2011.08-1/CITAN/man/sqlTrim.Rd |only
CITAN-2011.08-1/CITAN/src |only
CITAN-2014.12-1/CITAN/CHANGELOG | 23
CITAN-2014.12-1/CITAN/DESCRIPTION | 57
CITAN-2014.12-1/CITAN/MD5 | 176 --
CITAN-2014.12-1/CITAN/NAMESPACE | 115 -
CITAN-2014.12-1/CITAN/R/CITAN-package.R | 252 +--
CITAN-2014.12-1/CITAN/R/biblio.assess.R | 39
CITAN-2014.12-1/CITAN/R/biblio.clear.R | 143 --
CITAN-2014.12-1/CITAN/R/biblio.connect.R | 70 -
CITAN-2014.12-1/CITAN/R/biblio.create.R | 442 +++---
CITAN-2014.12-1/CITAN/R/biblio.duplicates.authors.R |only
CITAN-2014.12-1/CITAN/R/biblio.duplicates.documents.R |only
CITAN-2014.12-1/CITAN/R/biblio.getcitations.R | 79 -
CITAN-2014.12-1/CITAN/R/biblio.import.R | 688 +++++-----
CITAN-2014.12-1/CITAN/R/biblio.info.R | 246 +--
CITAN-2014.12-1/CITAN/R/biblio.internal.R | 119 -
CITAN-2014.12-1/CITAN/R/biblio.search.R | 262 ++-
CITAN-2014.12-1/CITAN/R/biblio.stats.R | 670 ++++-----
CITAN-2014.12-1/CITAN/R/biblio.tidy.R |only
CITAN-2014.12-1/CITAN/R/execquery.R | 52
CITAN-2014.12-1/CITAN/R/rgtk2.R | 452 ++----
CITAN-2014.12-1/CITAN/R/scopus.data.R | 52
CITAN-2014.12-1/CITAN/R/scopus.importsources.R | 383 ++---
CITAN-2014.12-1/CITAN/R/scopus.readcsv.R | 304 +---
CITAN-2014.12-1/CITAN/R/string.R | 155 +-
CITAN-2014.12-1/CITAN/data/Scopus_ASJC.rda |binary
CITAN-2014.12-1/CITAN/data/Scopus_SourceList.rda |binary
CITAN-2014.12-1/CITAN/inst/CITATION | 13
CITAN-2014.12-1/CITAN/man/CITAN-package.Rd | 242 +--
CITAN-2014.12-1/CITAN/man/Scopus_ASJC.Rd | 36
CITAN-2014.12-1/CITAN/man/Scopus_ImportSources.Rd | 48
CITAN-2014.12-1/CITAN/man/Scopus_ReadCSV.Rd | 161 +-
CITAN-2014.12-1/CITAN/man/Scopus_SourceList.Rd | 67
CITAN-2014.12-1/CITAN/man/as.character.authorinfo.Rd | 33
CITAN-2014.12-1/CITAN/man/as.character.docinfo.Rd | 37
CITAN-2014.12-1/CITAN/man/dbExecQuery.Rd | 32
CITAN-2014.12-1/CITAN/man/lbsAssess.Rd | 76 -
CITAN-2014.12-1/CITAN/man/lbsClear.Rd | 43
CITAN-2014.12-1/CITAN/man/lbsConnect.Rd | 46
CITAN-2014.12-1/CITAN/man/lbsCreate.Rd | 249 +--
CITAN-2014.12-1/CITAN/man/lbsDeleteAllAuthorsDocuments.Rd | 39
CITAN-2014.12-1/CITAN/man/lbsDeleteDocuments.Rd | 45
CITAN-2014.12-1/CITAN/man/lbsDescriptiveStats.Rd | 76 -
CITAN-2014.12-1/CITAN/man/lbsDisconnect.Rd |only
CITAN-2014.12-1/CITAN/man/lbsFindDuplicateAuthors.Rd | 76 -
CITAN-2014.12-1/CITAN/man/lbsFindDuplicateTitles.Rd | 67
CITAN-2014.12-1/CITAN/man/lbsGetCitations.Rd | 88 -
CITAN-2014.12-1/CITAN/man/lbsGetInfoAuthors.Rd | 40
CITAN-2014.12-1/CITAN/man/lbsGetInfoDocuments.Rd | 41
CITAN-2014.12-1/CITAN/man/lbsImportDocuments.Rd | 97 -
CITAN-2014.12-1/CITAN/man/lbsMergeAuthors.Rd | 55
CITAN-2014.12-1/CITAN/man/lbsSearchAuthors.Rd | 51
CITAN-2014.12-1/CITAN/man/lbsSearchDocuments.Rd | 80 -
CITAN-2014.12-1/CITAN/man/lbsTidy.Rd | 36
CITAN-2014.12-1/CITAN/man/print.authorinfo.Rd | 25
CITAN-2014.12-1/CITAN/man/print.docinfo.Rd | 25
121 files changed, 3345 insertions(+), 3358 deletions(-)
Title: Calculate Agreement or Consensus in Ordered Rating Scales
Diff between agrmt versions 1.35 dated 2014-09-25 and 1.39 dated 2014-12-06
Description: Calculate agreement or consensus in ordered rating scales. The package implements van der Eijk's (2001) measure of agreement A, which can be used to describe agreement, consensus, or polarization among respondents. It also implements measures of consensus (dispersion) by Leik, Tatsle and Wierman, Blair and Lacy, Kvalseth, and Berry and Mielke. Furthermore, an implementation of Galtungs AJUS-system is provided to classify distributions, as well as a function to identify the position of multiple modes.
Author: Didier Ruedin
Maintainer: Didier Ruedin
DESCRIPTION | 16 ++++++++--------
MD5 | 8 +++++---
R/MRQ.R |only
build/vignette.rds |binary
man/BerryMielke.Rd | 7 +++++--
man/MRQ.Rd |only
6 files changed, 18 insertions(+), 13 deletions(-)
Title: General network (HTTP/FTP/...) client interface for R
Diff between RCurl versions 1.95-4.4 dated 2014-11-29 and 1.95-4.5 dated 2014-12-06
Description: The package allows one to compose general HTTP requests
and provides convenient functions to fetch URIs, get & post
forms, etc. and process the results returned by the Web server.
This provides a great deal of control over the HTTP/FTP/...
connection and the form of the request while providing a
higher-level interface than is available just using R socket
connections. Additionally, the underlying implementation is
robust and extensive, supporting FTP/FTPS/TFTP (uploads and
downloads), SSL/HTTPS, telnet, dict, ldap, and also supports
cookies, redirects, authentication, etc.
Author: Duncan Temple Lang
Maintainer: Duncan Temple Lang
DESCRIPTION | 6 +++---
MD5 | 8 ++++----
configure.win | 18 ------------------
src/Makevars.win | 13 ++++++-------
src/curl_base64.c | 4 +++-
5 files changed, 16 insertions(+), 33 deletions(-)
Title: Interval Regression
Diff between intReg versions 0.1-2 dated 2012-01-12 and 0.2-6 dated 2014-12-06
Description: Estimating interval regression models. Supports both common and observation-specific boundaries.
Author: Ott Toomet
Maintainer: Ott Toomet
DESCRIPTION | 14 +--
MD5 | 27 +++---
NAMESPACE | 7 +
NEWS | 22 +++++
R/coef.intReg.R | 7 +
R/gumbel.R |only
R/intReg.R | 45 ++++++++---
R/nObs.intReg.R |only
R/print.summary.intReg.R | 4 -
R/summary.intReg.R | 3
R/vcov.intReg.R | 4 -
man/coef.intReg.Rd | 17 ++--
man/intReg.Rd | 38 ++++++++-
man/nObs.intReg.Rd |only
tests/intReg.R | 46 +++++++++++
tests/intReg.Rout.save | 182 +++++++++++++++++++++++++++++++++++------------
16 files changed, 315 insertions(+), 101 deletions(-)
Title: Toolkit Implementation of gWidgets2 for tcltk
Diff between gWidgets2tcltk versions 1.0-2 dated 2013-10-29 and 1.0-3 dated 2014-12-06
More information about gWidgets2tcltk at CRAN
Description: Port of the gWidgets2 API for the tcltk
package.
Author: John Verzani
Maintainer: John Verzani
DESCRIPTION | 10 +++----
MD5 | 48 ++++++++++++++++++------------------
NAMESPACE | 1
NEWS | 7 +++++
R/GComponent.R | 70 ++++++++++++++++++++++++++++++++++++++++++++++++-----
R/GContainer.R | 5 +++
R/dialogs.R | 1
R/gbutton.R | 9 +++---
R/gcalendar.R | 19 +++++++++-----
R/gcheckboxgroup.R | 12 ++++++---
R/gedit.R | 3 +-
R/gfile.R | 2 -
R/gformlayout.R | 8 +++++-
R/gmenu.R | 3 ++
R/gradio.R | 2 -
R/gslider.R | 14 ++++++----
R/gtable.R | 28 +++++++++++----------
R/gtext.R | 51 +++++++++++++++++++++-----------------
R/gtimer.R | 5 +++
R/gtoolbar.R | 7 +++--
R/gtree.R | 48 ++++++++++++++++++++++++------------
R/gwindow.R | 2 -
R/tablelist.R | 5 ++-
R/tk2tip.R | 24 ++++++++++--------
R/zzz.R | 2 -
25 files changed, 258 insertions(+), 128 deletions(-)
Permanent link
Title: Copula Density and 2-D Hazard Estimation using Smoothing Splines
Diff between gsscopu versions 0.9-1 dated 2013-12-10 and 0.9-2 dated 2014-12-06
Description: A collection of routines for the estimation of copula density
and 2-D hazard function using smoothing splines.
Author: Chong Gu
Maintainer: Chong Gu
ChangeLog | 6 ++++++
DESCRIPTION | 8 ++++----
MD5 | 8 ++++----
NAMESPACE | 5 +++--
data/DiaRet.rda |binary
5 files changed, 17 insertions(+), 10 deletions(-)
Title: General Smoothing Splines
Diff between gss versions 2.1-3 dated 2014-07-21 and 2.1-4 dated 2014-12-06
Description: A comprehensive package for structural multivariate
function estimation using smoothing splines.
Author: Chong Gu
Maintainer: Chong Gu
ChangeLog | 8 ++++++++
DESCRIPTION | 8 ++++----
MD5 | 30 +++++++++++++++---------------
R/family.R | 36 ++++++++++++++++++++++--------------
R/family.cv.R | 10 ++++++----
R/family.proj.R | 16 ++++++++++------
man/gssanova.Rd | 2 +-
man/gssanova0.Rd | 4 ++--
man/ssanova.Rd | 2 +-
man/ssanova0.Rd | 2 +-
man/ssanova9.Rd | 2 +-
man/sscden.Rd | 2 +-
man/sscox.Rd | 2 +-
man/ssden.Rd | 2 +-
man/sshzd.Rd | 2 +-
man/ssllrm.Rd | 2 +-
16 files changed, 76 insertions(+), 54 deletions(-)
Title: Variable Metric Nonlinear Function Minimization
Diff between Rvmmin versions 2013-11.11 dated 2013-11-14 and 2013-11.12 dated 2014-12-06
Description: Variable metric nonlinear function minimization with bounds constraints.
Author: John C. Nash [aut, cre]
Maintainer: John C. Nash
DESCRIPTION | 13 ++++++-------
MD5 | 6 +++---
NAMESPACE | 3 +++
NEWS | 6 ++++++
4 files changed, 18 insertions(+), 10 deletions(-)
Title: A MediaWiki API wrapper
Diff between WikipediR versions 1.0.1 dated 2014-08-17 and 1.1.0 dated 2014-12-06
Description: A wrapper for the MediaWiki API, aimed particularly at the
Wikimedia 'production' wikis, such as Wikipedia. It can be used to retrieve
page text, information about users or the history of pages, and elements of
the category tree.
Author: Oliver Keyes
Maintainer: Oliver Keyes
WikipediR-1.0.1/WikipediR/R/APIErrorHandler.R |only
WikipediR-1.0.1/WikipediR/R/ConnectionErrorHandler.R |only
WikipediR-1.0.1/WikipediR/R/InvalidRevIDsHandler.R |only
WikipediR-1.0.1/WikipediR/R/LimitHandler.R |only
WikipediR-1.0.1/WikipediR/R/MissingPagesHandler.R |only
WikipediR-1.0.1/WikipediR/R/MissingUsersHandler.R |only
WikipediR-1.0.1/WikipediR/R/UncachedDiffsHandler.R |only
WikipediR-1.0.1/WikipediR/R/wiki_conClass.R |only
WikipediR-1.0.1/WikipediR/man/wiki_conClass-class.Rd |only
WikipediR-1.1.0/WikipediR/DESCRIPTION | 18 ++-
WikipediR-1.1.0/WikipediR/MD5 | 79 +++++++++--------
WikipediR-1.1.0/WikipediR/NAMESPACE | 4
WikipediR-1.1.0/WikipediR/NEWS | 5 +
WikipediR-1.1.0/WikipediR/R/handle_API_errors.R |only
WikipediR-1.1.0/WikipediR/R/handle_connection_errors.R |only
WikipediR-1.1.0/WikipediR/R/handle_invalid_revIDs.R |only
WikipediR-1.1.0/WikipediR/R/handle_limits.R |only
WikipediR-1.1.0/WikipediR/R/handle_missing_pages.R |only
WikipediR-1.1.0/WikipediR/R/handle_missing_users.R |only
WikipediR-1.1.0/WikipediR/R/handle_uncached_diffs.R |only
WikipediR-1.1.0/WikipediR/R/wiki_call.R | 4
WikipediR-1.1.0/WikipediR/R/wiki_catpages.R | 4
WikipediR-1.1.0/WikipediR/R/wiki_con.R | 18 ++-
WikipediR-1.1.0/WikipediR/R/wiki_diff.R | 8 -
WikipediR-1.1.0/WikipediR/R/wiki_page.R | 4
WikipediR-1.1.0/WikipediR/R/wiki_pagecats.R | 6 -
WikipediR-1.1.0/WikipediR/R/wiki_recentchanges.R | 2
WikipediR-1.1.0/WikipediR/R/wiki_revision.R | 6 -
WikipediR-1.1.0/WikipediR/R/wiki_usercontribs.R | 6 -
WikipediR-1.1.0/WikipediR/R/wiki_userinfo.R | 6 -
WikipediR-1.1.0/WikipediR/README.md | 6 -
WikipediR-1.1.0/WikipediR/man/RDataRebuild.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_call.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_catpages.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_con.Rd | 7 +
WikipediR-1.1.0/WikipediR/man/wiki_diff.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_page.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_pagecats.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_parse.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_recentchanges.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_revision.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_timestamp.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_usercontribs.Rd | 2
WikipediR-1.1.0/WikipediR/man/wiki_userinfo.Rd | 2
WikipediR-1.1.0/WikipediR/man/wikis.Rd | 2
WikipediR-1.1.0/WikipediR/tests |only
46 files changed, 115 insertions(+), 94 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-11-30 1.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-12-05 1.0.3
2013-03-18 1.0.2
2013-03-15 1.0.1
2013-02-21 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-12-05 2.2.4
2013-03-15 2.2.3
2013-03-06 2.2.2
Title: Implement semantically rich I/O for the NeXML format
Diff between RNeXML versions 1.1.3 dated 2014-08-06 and 2.0.0 dated 2014-12-06
Description: Provides access to phyloinformatic data in NeXML
format. The package should add new functionality to R such as the
possibility to manipulate NeXML objects in more various and refined way and
compatibility with 'ape' objects. Note that the Sxslt package suggested can
be installed from the Omegahat repository, though it can also be obtained
from https://github.com/cboettig/Sxslt. rrdf is available at https://github.com/egonw/rrdf/
Author: Carl Boettiger [cre, aut],
Scott Chamberlain [aut],
Hilmar Lapp [aut],
Kseniia Shumelchyk [aut],
Rutger Vos [aut]
Maintainer: Carl Boettiger
DESCRIPTION | 17 ++-
MD5 | 111 ++++++++++++------------
NAMESPACE | 2
NEWS | 8 +
R/add_basic_meta.R | 12 +-
R/classes.R | 2
R/get_characters.R | 23 ++++
R/get_rdf.R | 2
R/nexml_publish.R | 14 +--
R/nexml_write.R | 16 +--
README.md | 76 +++++++++-------
build/vignette.rds |binary
inst/doc/tutorial.R | 13 +-
inst/doc/tutorial.Rmd | 23 +++-
inst/doc/tutorial.html | 95 ++++++++++++--------
man/add_basic_meta.Rd | 14 +--
man/add_characters.Rd | 2
man/add_meta.Rd | 2
man/add_namespaces.Rd | 2
man/add_trees.Rd | 2
man/c-ListOfmeta-method.Rd | 2
man/c-meta-method.Rd | 2
man/c-nexml-method.Rd | 2
man/flatten_multiphylo.Rd | 2
man/get_characters.Rd | 8 +
man/get_characters_list.Rd | 8 +
man/get_citation.Rd | 2
man/get_flat_trees.Rd | 2
man/get_license.Rd | 2
man/get_metadata.Rd | 2
man/get_namespaces.Rd | 2
man/get_rdf.Rd | 2
man/get_taxa.Rd | 2
man/get_taxa_list.Rd | 2
man/get_taxa_meta.Rd | 2
man/get_taxa_meta_list.Rd | 2
man/get_trees.Rd | 2
man/get_trees_list.Rd | 2
man/meta.Rd | 2
man/nexml_add.Rd | 2
man/nexml_figshare.Rd | 2
man/nexml_get.Rd | 2
man/nexml_publish.Rd | 2
man/nexml_read.Rd | 2
man/nexml_to_simmap.Rd | 2
man/nexml_validate.Rd | 2
man/nexml_write.Rd | 10 +-
man/reset_id_counter.Rd | 2
man/simmap_ex.Rd | 2
man/simmap_to_nexml.Rd | 2
man/taxize_nexml.Rd | 2
man/toPhylo.Rd | 2
tests/testthat/test_meta.R | 4
vignettes/Makefile | 2
vignettes/figure/tutorial-unnamed-chunk-4-1.png |only
vignettes/tutorial.Rmd | 23 +++-
vignettes/tutorial.md | 76 +++++++++-------
57 files changed, 363 insertions(+), 262 deletions(-)
Title: Classes for Relational Data
Diff between network versions 1.10.2 dated 2014-07-09 and 1.11.3 dated 2014-12-06
Description: Tools to create and modify network objects. The network class can represent a range of relational data types, and supports arbitrary vertex/edge/graph attributes.
Author: Carter T. Butts [aut, cre],
David Hunter [ctb],
Mark Handcock [ctb],
Skye Bender-deMoll [ctb],
Jeffrey Horner [ctb]
Maintainer: Carter T. Butts
ChangeLog | 13 ++
DESCRIPTION | 8 -
MD5 | 52 ++++++-----
NAMESPACE | 129 ++++++++++++++++++++++++++++-
R/access.R | 185 ++++++++++++++++++++++++++----------------
R/coercion.R | 4
R/constructors.R | 29 ++++--
R/layout.R | 4
R/misc.R | 4
R/operators.R | 8 +
R/printsum.R | 56 ++++--------
build/vignette.rds |binary
inst/doc/networkVignette.R | 2
inst/doc/networkVignette.Rnw | 21 ++--
inst/doc/networkVignette.pdf |binary
inst/include |only
man/attribute.methods.Rd | 20 ++--
man/get.inducedSubgraph.Rd | 15 ++-
man/network-package.Rd | 96 +++++++++++----------
src/Rinit.c |only
src/access.c | 97 ++++++++++++++++++++++
src/access.h | 8 +
src/layout.c | 3
tests/general.tests.R | 115 ++++++++++++++++++--------
tests/general.tests2.R |only
tests/list.attribute.tests.R | 11 ++
tests/network.battery.R | 20 ++++
vignettes/networkVignette.Rnw | 21 ++--
28 files changed, 661 insertions(+), 260 deletions(-)
Title: Methods that Apply to Rows and Columns of a Matrix
Diff between matrixStats versions 0.10.3 dated 2014-10-15 and 0.12.0 dated 2014-12-06
Description: Methods operating on rows and columns of matrices, e.g. col/rowMedians(), col/rowRanks() and col/rowSds(). There are also some vector-based methods, e.g. binMeans(), madDiff() and weightedMedians(). All methods have been optimized for speed and memory usage.
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson
matrixStats-0.10.3/matrixStats/inst/benchmarking/colRowSds.md.rsp |only
matrixStats-0.10.3/matrixStats/src/rowRanks.c |only
matrixStats-0.10.3/matrixStats/src/rowRanks_Integer.c |only
matrixStats-0.10.3/matrixStats/src/rowRanks_Real.c |only
matrixStats-0.10.3/matrixStats/src/rowRanks_TYPE_TIES-template.h |only
matrixStats-0.10.3/matrixStats/src/rowRanks_TYPE_TIES.c |only
matrixStats-0.10.3/matrixStats/tests/rowRanks,ties.R |only
matrixStats-0.12.0/matrixStats/DESCRIPTION | 12
matrixStats-0.12.0/matrixStats/MD5 | 312 +++++----
matrixStats-0.12.0/matrixStats/NAMESPACE | 41 -
matrixStats-0.12.0/matrixStats/NEWS | 115 +++
matrixStats-0.12.0/matrixStats/R/999.package.R | 8
matrixStats-0.12.0/matrixStats/R/allocMatrix.R |only
matrixStats-0.12.0/matrixStats/R/benchmark.R | 46 -
matrixStats-0.12.0/matrixStats/R/binCounts.R | 4
matrixStats-0.12.0/matrixStats/R/indexByRow.R | 44 -
matrixStats-0.12.0/matrixStats/R/logSumExp.R | 2
matrixStats-0.12.0/matrixStats/R/madDiff.R | 6
matrixStats-0.12.0/matrixStats/R/meanOver.R |only
matrixStats-0.12.0/matrixStats/R/product.R | 20
matrixStats-0.12.0/matrixStats/R/rowCollapse.R | 42 -
matrixStats-0.12.0/matrixStats/R/rowCounts.R | 139 ++--
matrixStats-0.12.0/matrixStats/R/rowCumsums.R |only
matrixStats-0.12.0/matrixStats/R/rowDiffs.R | 15
matrixStats-0.12.0/matrixStats/R/rowLogSumExps.R | 14
matrixStats-0.12.0/matrixStats/R/rowMads.R | 51 +
matrixStats-0.12.0/matrixStats/R/rowMedians.R | 16
matrixStats-0.12.0/matrixStats/R/rowOrderStats.R | 21
matrixStats-0.12.0/matrixStats/R/rowProds.R | 46 -
matrixStats-0.12.0/matrixStats/R/rowQuantiles.R | 157 ++++
matrixStats-0.12.0/matrixStats/R/rowRanges.R | 331 +---------
matrixStats-0.12.0/matrixStats/R/rowRanks.R | 65 -
matrixStats-0.12.0/matrixStats/R/rowSds.R | 3
matrixStats-0.12.0/matrixStats/R/rowTabulates.R | 60 +
matrixStats-0.12.0/matrixStats/R/rowVars.R | 22
matrixStats-0.12.0/matrixStats/R/rowWeightedMeans.matrix.R | 33
matrixStats-0.12.0/matrixStats/R/rowWeightedMedians.matrix.R | 6
matrixStats-0.12.0/matrixStats/R/sdDiff.R | 6
matrixStats-0.12.0/matrixStats/R/signTabulate.R | 84 +-
matrixStats-0.12.0/matrixStats/R/sumOver.R |only
matrixStats-0.12.0/matrixStats/R/varDiff.R | 15
matrixStats-0.12.0/matrixStats/R/weightedMad.R | 10
matrixStats-0.12.0/matrixStats/R/weightedMedian.R | 2
matrixStats-0.12.0/matrixStats/R/weightedVar.R | 17
matrixStats-0.12.0/matrixStats/R/x_OP_y.R |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/R/random-matrices.R | 69 +-
matrixStats-0.12.0/matrixStats/inst/benchmarking/R/random-vectors.R | 58 -
matrixStats-0.12.0/matrixStats/inst/benchmarking/allocMatrix.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/allocVector.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/anyMissing.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/binCounts.md.rsp | 202 +++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/binMeans.md.rsp | 208 +++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowAlls.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowAnyMissings.md.rsp | 188 ++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowAnys.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowCounts.md.rsp | 169 ++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowCummins.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowCumprods.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowCumsums.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowDiffs.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowLogSumExps.md.rsp | 183 ++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowMads.md.rsp | 157 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowMeans.md.rsp | 152 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowMedians.md.rsp | 147 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowMins.md.rsp | 164 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowOrderStats.md.rsp | 155 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowProds.md.rsp | 154 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowQuantiles.md.rsp | 146 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowRanges.md.rsp | 147 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowRanks.md.rsp | 148 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowSums.md.rsp | 153 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowTabulates.md.rsp | 138 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowVars.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowWeightedMeans.md.rsp | 144 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/colRowWeightedMedians.md.rsp | 144 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/includes/appendix.md.rsp | 30
matrixStats-0.12.0/matrixStats/inst/benchmarking/includes/footer.md.rsp | 38 -
matrixStats-0.12.0/matrixStats/inst/benchmarking/includes/header.md.rsp | 8
matrixStats-0.12.0/matrixStats/inst/benchmarking/includes/references.md.rsp | 18
matrixStats-0.12.0/matrixStats/inst/benchmarking/includes/results.md.rsp | 214 +++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/includes/setup.md.rsp | 118 +--
matrixStats-0.12.0/matrixStats/inst/benchmarking/index.md.rsp | 144 ++--
matrixStats-0.12.0/matrixStats/inst/benchmarking/indexByRow.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/logSumExp.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/madDiff.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/meanOver.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/product.md.rsp | 194 ++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/sumOver.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/t_tx_OP_y.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/varDiff.md.rsp |only
matrixStats-0.12.0/matrixStats/inst/benchmarking/weightedMedian.md.rsp | 178 ++---
matrixStats-0.12.0/matrixStats/inst/benchmarking/x_OP_y.md.rsp |only
matrixStats-0.12.0/matrixStats/man/allocMatrix.Rd |only
matrixStats-0.12.0/matrixStats/man/binCounts.Rd | 4
matrixStats-0.12.0/matrixStats/man/indexByRow.Rd | 31
matrixStats-0.12.0/matrixStats/man/logSumExp.Rd | 2
matrixStats-0.12.0/matrixStats/man/matrixStats-package.Rd | 10
matrixStats-0.12.0/matrixStats/man/meanOver.Rd |only
matrixStats-0.12.0/matrixStats/man/rowCollapse.Rd | 6
matrixStats-0.12.0/matrixStats/man/rowCounts.Rd | 39 -
matrixStats-0.12.0/matrixStats/man/rowCumsums.Rd |only
matrixStats-0.12.0/matrixStats/man/rowDiffs.Rd | 10
matrixStats-0.12.0/matrixStats/man/rowLogSumExps.Rd | 6
matrixStats-0.12.0/matrixStats/man/rowMedians.Rd | 6
matrixStats-0.12.0/matrixStats/man/rowOrderStats.Rd | 7
matrixStats-0.12.0/matrixStats/man/rowProds.Rd | 4
matrixStats-0.12.0/matrixStats/man/rowQuantiles.Rd | 9
matrixStats-0.12.0/matrixStats/man/rowRanges.Rd | 23
matrixStats-0.12.0/matrixStats/man/rowRanks.Rd | 8
matrixStats-0.12.0/matrixStats/man/rowSds.Rd | 7
matrixStats-0.12.0/matrixStats/man/rowVars.Rd | 6
matrixStats-0.12.0/matrixStats/man/signTabulate.Rd | 2
matrixStats-0.12.0/matrixStats/man/sumOver.Rd |only
matrixStats-0.12.0/matrixStats/man/varDiff.Rd | 9
matrixStats-0.12.0/matrixStats/man/weightedMad.Rd | 6
matrixStats-0.12.0/matrixStats/man/weightedMedian.Rd | 2
matrixStats-0.12.0/matrixStats/man/weightedVar.Rd | 7
matrixStats-0.12.0/matrixStats/man/xUNDERSCOREOPUNDERSCOREy.Rd |only
matrixStats-0.12.0/matrixStats/src/allocMatrix2.c |only
matrixStats-0.12.0/matrixStats/src/anyMissing.c | 34 -
matrixStats-0.12.0/matrixStats/src/binCounts-BINBY-template.h | 61 +
matrixStats-0.12.0/matrixStats/src/binCounts.c | 34 -
matrixStats-0.12.0/matrixStats/src/binMeans-BINBY-template.h | 102 +--
matrixStats-0.12.0/matrixStats/src/binMeans.c | 59 +
matrixStats-0.12.0/matrixStats/src/colCounts.c |only
matrixStats-0.12.0/matrixStats/src/colCounts_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/colOrderStats.c |only
matrixStats-0.12.0/matrixStats/src/colOrderStats_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/colRanges.c |only
matrixStats-0.12.0/matrixStats/src/colRanges_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/indexByRow.c |only
matrixStats-0.12.0/matrixStats/src/logSumExp.c | 280 --------
matrixStats-0.12.0/matrixStats/src/logSumExp_internal.c |only
matrixStats-0.12.0/matrixStats/src/logSumExp_internal.h |only
matrixStats-0.12.0/matrixStats/src/meanOver.c |only
matrixStats-0.12.0/matrixStats/src/meanOver_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/productExpSumLog.c | 35 -
matrixStats-0.12.0/matrixStats/src/productExpSumLog_TYPE-template.h | 51 -
matrixStats-0.12.0/matrixStats/src/psortKM.c | 97 +-
matrixStats-0.12.0/matrixStats/src/rowCounts.c | 49 -
matrixStats-0.12.0/matrixStats/src/rowCounts_TYPE-template.h | 61 -
matrixStats-0.12.0/matrixStats/src/rowCumMinMaxs.c |only
matrixStats-0.12.0/matrixStats/src/rowCumMinMaxs_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/rowCumprods.c |only
matrixStats-0.12.0/matrixStats/src/rowCumprods_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/rowCumsums.c |only
matrixStats-0.12.0/matrixStats/src/rowCumsums_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/rowLogSumExp.c |only
matrixStats-0.12.0/matrixStats/src/rowMads.c |only
matrixStats-0.12.0/matrixStats/src/rowMads_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/rowMedians.c | 54 -
matrixStats-0.12.0/matrixStats/src/rowMedians_TYPE-template.h | 148 +---
matrixStats-0.12.0/matrixStats/src/rowOrderStats.c | 45 -
matrixStats-0.12.0/matrixStats/src/rowOrderStats_TYPE-template.h | 62 -
matrixStats-0.12.0/matrixStats/src/rowRanges.c |only
matrixStats-0.12.0/matrixStats/src/rowRanges_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/rowRanksWithTies.c |only
matrixStats-0.12.0/matrixStats/src/rowRanksWithTies_TYPE_TIES-template.h |only
matrixStats-0.12.0/matrixStats/src/rowVars.c |only
matrixStats-0.12.0/matrixStats/src/rowVars_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/signTabulate.c | 21
matrixStats-0.12.0/matrixStats/src/signTabulate_TYPE-template.h | 45 -
matrixStats-0.12.0/matrixStats/src/sumOver.c |only
matrixStats-0.12.0/matrixStats/src/sumOver_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/src/templates-types.h | 117 ++-
matrixStats-0.12.0/matrixStats/src/templates-types_undef.h | 16
matrixStats-0.12.0/matrixStats/src/types.h |only
matrixStats-0.12.0/matrixStats/src/utils.h |only
matrixStats-0.12.0/matrixStats/src/x_OP_y.c |only
matrixStats-0.12.0/matrixStats/src/x_OP_y_TYPE-template.h |only
matrixStats-0.12.0/matrixStats/tests/allocArray.R |only
matrixStats-0.12.0/matrixStats/tests/allocMatrix.R |only
matrixStats-0.12.0/matrixStats/tests/allocVector.R |only
matrixStats-0.12.0/matrixStats/tests/binCounts.R | 4
matrixStats-0.12.0/matrixStats/tests/indexByRow.R |only
matrixStats-0.12.0/matrixStats/tests/meanOver.R |only
matrixStats-0.12.0/matrixStats/tests/product.R | 10
matrixStats-0.12.0/matrixStats/tests/psortKM.R | 32
matrixStats-0.12.0/matrixStats/tests/rowCollapse.R |only
matrixStats-0.12.0/matrixStats/tests/rowCounts.R | 85 ++
matrixStats-0.12.0/matrixStats/tests/rowCumMinMaxs.R |only
matrixStats-0.12.0/matrixStats/tests/rowCumprods.R |only
matrixStats-0.12.0/matrixStats/tests/rowCumsums.R |only
matrixStats-0.12.0/matrixStats/tests/rowDiffs.R |only
matrixStats-0.12.0/matrixStats/tests/rowMads.R | 105 ++-
matrixStats-0.12.0/matrixStats/tests/rowMedians.R | 201 +++++-
matrixStats-0.12.0/matrixStats/tests/rowOrderStats.R | 25
matrixStats-0.12.0/matrixStats/tests/rowQuantiles.R | 47 +
matrixStats-0.12.0/matrixStats/tests/rowRanges.R | 140 +++-
matrixStats-0.12.0/matrixStats/tests/rowRanks.R | 45 -
matrixStats-0.12.0/matrixStats/tests/rowSds.R | 26
matrixStats-0.12.0/matrixStats/tests/rowVars.R | 27
matrixStats-0.12.0/matrixStats/tests/rowWeightedMeans.R | 60 +
matrixStats-0.12.0/matrixStats/tests/rowWeightedMedians.R | 52 +
matrixStats-0.12.0/matrixStats/tests/signTabulate.R | 84 +-
matrixStats-0.12.0/matrixStats/tests/sumOver.R |only
matrixStats-0.12.0/matrixStats/tests/x_OP_y.R |only
197 files changed, 4449 insertions(+), 3802 deletions(-)
Title: Distributed Gaussian Process Calculations
Diff between bigGP versions 0.1-3 dated 2014-05-24 and 0.1-4 dated 2014-12-06
Description: Distributes Gaussian process calculations across nodes
in a distributed memory setting, using Rmpi. The bigGP class
provides high-level methods for maximum likelihood with normal data,
prediction, calculation of uncertainty (i.e., posterior covariance
calculations), and simulation of realizations. In addition, bigGP
provides an API for basic matrix calculations with distributed
covariance matrices, including Cholesky decomposition, back/forwardsolve,
crossproduct, and matrix multiplication.
Author: Christopher Paciorek [aut, cre],
Benjamin Lipshitz [aut],
Prabhat [ctb],
Cari Kaufman [ctb],
Tina Zhuo [ctb],
Rollin Thomas [ctb]
Maintainer: Christopher Paciorek
bigGP-0.1-3/bigGP/ax_blas.m4 |only
bigGP-0.1-3/bigGP/ax_lapack.m4 |only
bigGP-0.1-3/bigGP/configure.alt |only
bigGP-0.1-3/bigGP/configure.alt.ac |only
bigGP-0.1-4/bigGP/DESCRIPTION | 28 ++++++++--------
bigGP-0.1-4/bigGP/INSTALL | 12 +++----
bigGP-0.1-4/bigGP/MD5 | 37 +++++++++++-----------
bigGP-0.1-4/bigGP/NEWS | 8 ++++
bigGP-0.1-4/bigGP/R/bigGP.R | 2 -
bigGP-0.1-4/bigGP/data/SN2011fe.rda |binary
bigGP-0.1-4/bigGP/inst |only
bigGP-0.1-4/bigGP/man/SN2011fe.Rd | 7 ++++
bigGP-0.1-4/bigGP/man/bigGP.Rd | 5 ++
bigGP-0.1-4/bigGP/man/collectRectangularMatrix.Rd | 4 +-
bigGP-0.1-4/bigGP/man/krigeProblem-class.Rd | 7 +++-
bigGP-0.1-4/bigGP/man/remoteCalcChol.Rd | 7 +++-
bigGP-0.1-4/bigGP/man/remoteCrossProdMatSelf.Rd | 7 +++-
bigGP-0.1-4/bigGP/man/remoteCrossProdMatVec.Rd | 7 +++-
bigGP-0.1-4/bigGP/man/remoteForwardsolve.Rd | 7 +++-
bigGP-0.1-4/bigGP/man/remoteMultChol.Rd | 7 +++-
bigGP-0.1-4/bigGP/tools |only
21 files changed, 99 insertions(+), 46 deletions(-)
Title: Flexibly Reshape Data: A Reboot of the Reshape Package.
Diff between reshape2 versions 1.4 dated 2014-04-23 and 1.4.1 dated 2014-12-06
Description: Flexibly restructure and aggregate data using just two
functions: melt and dcast (or acast).
Author: Hadley Wickham
Maintainer: Hadley Wickham
DESCRIPTION | 14 +++++--------
MD5 | 46 ++++++++++++++++++++++-----------------------
NAMESPACE | 2 -
R/data.r | 16 ++++-----------
R/melt.r | 5 ++++
README.md | 4 +--
man/add_margins.Rd | 2 -
man/cast.Rd | 2 -
man/colsplit.Rd | 2 -
man/french_fries.Rd | 4 +--
man/guess_value.Rd | 2 -
man/margins.Rd | 2 -
man/melt.Rd | 6 ++---
man/melt.array.Rd | 8 +++----
man/melt.data.frame.Rd | 6 ++---
man/melt.default.Rd | 6 ++---
man/melt.list.Rd | 2 -
man/melt_check.Rd | 2 -
man/parse_formula.Rd | 2 -
man/recast.Rd | 2 -
man/smiths.Rd | 4 +--
man/tips.Rd | 4 +--
src/melt.cpp | 31 ++++++++++++++++--------------
tests/testthat/test-melt.r | 41 ++++++++++++++++++++++++++++++++++++++++
24 files changed, 128 insertions(+), 87 deletions(-)