Title: Bayesian Applied Regression Modeling via Stan
Description: Estimates pre-compiled regression models using the 'rstan' package, which provides
the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the
customary R syntax with a formula and data.frame plus some additional arguments for priors.
Author: Jonah Gabry [aut],
Trustees of Columbia University [cph],
R Core Deveopment Team [cph] (R/pp_data.R, R/stan_aov.R),
Douglas Bates [cph] (R/pp_data.R),
Martin Maechler [cph] (R/pp_data.R),
Ben Bolker [cph] (R/pp_data.R),
Steve Walker [cph] (R/pp_data.R),
Brian Ripley [cph] (R/stan_aov.R, R/stan_polr.R),
William Venables [cph] (R/stan_polr.R),
Ben Goodrich [cre, aut]
Maintainer: Ben Goodrich <benjamin.goodrich@columbia.edu>
Diff between rstanarm versions 2.9.0-1 dated 2016-01-09 and 2.9.0-3 dated 2016-02-13
rstanarm-2.9.0-1/rstanarm/exec/NKX.txt |only rstanarm-2.9.0-1/rstanarm/exec/common_functions.txt |only rstanarm-2.9.0-1/rstanarm/exec/data_glm.txt |only rstanarm-2.9.0-1/rstanarm/exec/glmer_stuff.txt |only rstanarm-2.9.0-1/rstanarm/exec/glmer_stuff2.txt |only rstanarm-2.9.0-1/rstanarm/exec/hyperparameters.txt |only rstanarm-2.9.0-1/rstanarm/exec/license.txt |only rstanarm-2.9.0-1/rstanarm/exec/make_eta.txt |only rstanarm-2.9.0-1/rstanarm/exec/make_eta_bern.txt |only rstanarm-2.9.0-1/rstanarm/exec/parameters_glm.txt |only rstanarm-2.9.0-1/rstanarm/exec/priors_glm.txt |only rstanarm-2.9.0-1/rstanarm/exec/tdata_glm.txt |only rstanarm-2.9.0-1/rstanarm/exec/tparameters_glm.txt |only rstanarm-2.9.0-1/rstanarm/exec/weights_offset.txt |only rstanarm-2.9.0-1/rstanarm/inst/doc/SVGs |only rstanarm-2.9.0-1/rstanarm/inst/doc/data |only rstanarm-2.9.0-1/rstanarm/man/ppcheck.Rd |only rstanarm-2.9.0-1/rstanarm/man/sigma.Rd |only rstanarm-2.9.0-1/rstanarm/tests/testthat/test_ppcheck.R |only rstanarm-2.9.0-1/rstanarm/vignettes/SVGs |only rstanarm-2.9.0-1/rstanarm/vignettes/data |only rstanarm-2.9.0-3/rstanarm/DESCRIPTION | 19 rstanarm-2.9.0-3/rstanarm/MD5 | 319 - rstanarm-2.9.0-3/rstanarm/NAMESPACE | 10 rstanarm-2.9.0-3/rstanarm/R/adapt_delta.R | 2 rstanarm-2.9.0-3/rstanarm/R/as.matrix.stanreg.R | 45 rstanarm-2.9.0-3/rstanarm/R/datasets.R |only rstanarm-2.9.0-3/rstanarm/R/example_model.R | 2 rstanarm-2.9.0-3/rstanarm/R/loo.R | 163 - rstanarm-2.9.0-3/rstanarm/R/misc.R | 240 + rstanarm-2.9.0-3/rstanarm/R/neg_binomial_2.R | 3 rstanarm-2.9.0-3/rstanarm/R/plots.R | 138 rstanarm-2.9.0-3/rstanarm/R/posterior_interval.R | 6 rstanarm-2.9.0-3/rstanarm/R/posterior_predict.R | 299 + rstanarm-2.9.0-3/rstanarm/R/pp_check.R | 319 + rstanarm-2.9.0-3/rstanarm/R/pp_data.R | 16 rstanarm-2.9.0-3/rstanarm/R/predict.R | 21 rstanarm-2.9.0-3/rstanarm/R/print-and-summary.R | 89 rstanarm-2.9.0-3/rstanarm/R/priors.R | 79 rstanarm-2.9.0-3/rstanarm/R/rstanarm-package.R | 13 rstanarm-2.9.0-3/rstanarm/R/shinystan.R | 2 rstanarm-2.9.0-3/rstanarm/R/stan_aov.R | 16 rstanarm-2.9.0-3/rstanarm/R/stan_gamm4.R | 27 rstanarm-2.9.0-3/rstanarm/R/stan_glm.R | 66 rstanarm-2.9.0-3/rstanarm/R/stan_glm.fit.R | 275 - rstanarm-2.9.0-3/rstanarm/R/stan_glmer.R | 48 rstanarm-2.9.0-3/rstanarm/R/stan_lm.R | 44 rstanarm-2.9.0-3/rstanarm/R/stan_lm.fit.R | 80 rstanarm-2.9.0-3/rstanarm/R/stan_polr.R | 79 rstanarm-2.9.0-3/rstanarm/R/stan_polr.fit.R | 95 rstanarm-2.9.0-3/rstanarm/R/stanmodels.R | 22 rstanarm-2.9.0-3/rstanarm/R/stanreg-methods.R | 231 - rstanarm-2.9.0-3/rstanarm/R/stanreg-objects.R | 2 rstanarm-2.9.0-3/rstanarm/R/stanreg.R | 19 rstanarm-2.9.0-3/rstanarm/R/zzz.R | 2 rstanarm-2.9.0-3/rstanarm/build/vignette.rds |binary rstanarm-2.9.0-3/rstanarm/data/bball1970.rda |only rstanarm-2.9.0-3/rstanarm/data/bball2006.rda |only rstanarm-2.9.0-3/rstanarm/data/example_model.rda |binary rstanarm-2.9.0-3/rstanarm/data/kidiq.rda |only rstanarm-2.9.0-3/rstanarm/data/mortality.rda |only rstanarm-2.9.0-3/rstanarm/data/roaches.rda |only rstanarm-2.9.0-3/rstanarm/data/tumors.rda |only rstanarm-2.9.0-3/rstanarm/data/wells.rda |only rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch03.R | 16 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch04.R | 74 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch05.R | 39 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch07.R | 17 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch08.R | 32 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch09.R | 7 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch12_13.R | 24 rstanarm-2.9.0-3/rstanarm/demo/ARM_Ch14.R | 7 rstanarm-2.9.0-3/rstanarm/demo/CLEANUP.R | 2 rstanarm-2.9.0-3/rstanarm/demo/SETUP.R | 1 rstanarm-2.9.0-3/rstanarm/exec/bernoulli.stan | 103 rstanarm-2.9.0-3/rstanarm/exec/binomial.stan | 73 rstanarm-2.9.0-3/rstanarm/exec/continuous.stan | 49 rstanarm-2.9.0-3/rstanarm/exec/count.stan | 71 rstanarm-2.9.0-3/rstanarm/exec/lm.stan | 72 rstanarm-2.9.0-3/rstanarm/exec/polr.stan | 65 rstanarm-2.9.0-3/rstanarm/inst/NEWS | 19 rstanarm-2.9.0-3/rstanarm/inst/chunks |only rstanarm-2.9.0-3/rstanarm/inst/doc/aov.R | 8 rstanarm-2.9.0-3/rstanarm/inst/doc/aov.Rmd | 11 rstanarm-2.9.0-3/rstanarm/inst/doc/aov.html | 128 rstanarm-2.9.0-3/rstanarm/inst/doc/binomial.R | 27 rstanarm-2.9.0-3/rstanarm/inst/doc/binomial.Rmd | 48 rstanarm-2.9.0-3/rstanarm/inst/doc/binomial.html | 203 - rstanarm-2.9.0-3/rstanarm/inst/doc/children/SETTINGS-knitr.txt | 2 rstanarm-2.9.0-3/rstanarm/inst/doc/continuous.R | 64 rstanarm-2.9.0-3/rstanarm/inst/doc/continuous.Rmd | 81 rstanarm-2.9.0-3/rstanarm/inst/doc/continuous.html | 275 - rstanarm-2.9.0-3/rstanarm/inst/doc/count.R | 35 rstanarm-2.9.0-3/rstanarm/inst/doc/count.Rmd | 48 rstanarm-2.9.0-3/rstanarm/inst/doc/count.html | 157 rstanarm-2.9.0-3/rstanarm/inst/doc/glmer.R | 2 rstanarm-2.9.0-3/rstanarm/inst/doc/glmer.Rmd | 7 rstanarm-2.9.0-3/rstanarm/inst/doc/glmer.html | 58 rstanarm-2.9.0-3/rstanarm/inst/doc/lm.R | 14 rstanarm-2.9.0-3/rstanarm/inst/doc/lm.Rmd | 21 rstanarm-2.9.0-3/rstanarm/inst/doc/lm.html | 148 rstanarm-2.9.0-3/rstanarm/inst/doc/polr.R | 18 rstanarm-2.9.0-3/rstanarm/inst/doc/polr.Rmd | 21 rstanarm-2.9.0-3/rstanarm/inst/doc/polr.html | 134 rstanarm-2.9.0-3/rstanarm/inst/doc/pooling.R |only rstanarm-2.9.0-3/rstanarm/inst/doc/pooling.Rmd |only rstanarm-2.9.0-3/rstanarm/inst/doc/pooling.html |only rstanarm-2.9.0-3/rstanarm/inst/doc/rstanarm.R | 49 rstanarm-2.9.0-3/rstanarm/inst/doc/rstanarm.Rmd | 68 rstanarm-2.9.0-3/rstanarm/inst/doc/rstanarm.html | 227 - rstanarm-2.9.0-3/rstanarm/man/family.stanreg.Rd |only rstanarm-2.9.0-3/rstanarm/man/log_lik.Rd | 4 rstanarm-2.9.0-3/rstanarm/man/loo.stanreg.Rd | 32 rstanarm-2.9.0-3/rstanarm/man/neg_binomial_2.Rd | 1 rstanarm-2.9.0-3/rstanarm/man/plot.stanreg.Rd | 2 rstanarm-2.9.0-3/rstanarm/man/plots.Rd | 2 rstanarm-2.9.0-3/rstanarm/man/posterior_predict.Rd | 56 rstanarm-2.9.0-3/rstanarm/man/pp_check.Rd | 32 rstanarm-2.9.0-3/rstanarm/man/priors.Rd | 50 rstanarm-2.9.0-3/rstanarm/man/rstanarm-datasets.Rd |only rstanarm-2.9.0-3/rstanarm/man/rstanarm-package.Rd | 17 rstanarm-2.9.0-3/rstanarm/man/stan_gamm4.Rd | 14 rstanarm-2.9.0-3/rstanarm/man/stan_glm.Rd | 23 rstanarm-2.9.0-3/rstanarm/man/stan_glmer.Rd | 19 rstanarm-2.9.0-3/rstanarm/man/stan_lm.Rd | 5 rstanarm-2.9.0-3/rstanarm/man/stan_polr.Rd | 3 rstanarm-2.9.0-3/rstanarm/man/stanreg-methods.Rd | 19 rstanarm-2.9.0-3/rstanarm/man/terms.stanreg.Rd | 9 rstanarm-2.9.0-3/rstanarm/src/include/models.hpp | 1612 +++++----- rstanarm-2.9.0-3/rstanarm/tests/testthat.R | 2 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_loo.R | 72 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_methods.R | 130 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_misc.R | 157 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_posterior_predict.R | 72 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_pp_check.R |only rstanarm-2.9.0-3/rstanarm/tests/testthat/test_predict.R | 26 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_stan_functions.R | 18 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_stan_glm.R | 83 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_stan_lm.R | 13 rstanarm-2.9.0-3/rstanarm/tests/testthat/test_stan_polr.R | 27 rstanarm-2.9.0-3/rstanarm/tools/make_cpp.R | 7 rstanarm-2.9.0-3/rstanarm/vignettes/.install_extras | 2 rstanarm-2.9.0-3/rstanarm/vignettes/aov.Rmd | 11 rstanarm-2.9.0-3/rstanarm/vignettes/binomial.Rmd | 48 rstanarm-2.9.0-3/rstanarm/vignettes/children/SETTINGS-knitr.txt | 2 rstanarm-2.9.0-3/rstanarm/vignettes/continuous.Rmd | 81 rstanarm-2.9.0-3/rstanarm/vignettes/count.Rmd | 48 rstanarm-2.9.0-3/rstanarm/vignettes/glmer.Rmd | 7 rstanarm-2.9.0-3/rstanarm/vignettes/lm.Rmd | 21 rstanarm-2.9.0-3/rstanarm/vignettes/polr.Rmd | 21 rstanarm-2.9.0-3/rstanarm/vignettes/pooling.Rmd |only rstanarm-2.9.0-3/rstanarm/vignettes/rstanarm.Rmd | 68 152 files changed, 4454 insertions(+), 3678 deletions(-)
Title: Interface to NetCDF Datasets
Description: An interface to the NetCDF file format designed by Unidata
for efficient storage of array-oriented scientific data and descriptions.
The R interface is closely based on the C API of the NetCDF library,
and it includes calendar conversions from the Unidata UDUNITS library.
The current implementation supports all operations on NetCDF datasets
in classic and 64-bit offset file formats, and NetCDF4-classic format
is supported for reading and modification of existing files.
Author: Pavel Michna, with contributions from Milton Woods
Maintainer: Milton Woods <mwoods@users.r-forge.r-project.org>
Diff between RNetCDF versions 1.7-3 dated 2015-05-11 and 1.8-1 dated 2016-02-13
DESCRIPTION | 12 INSTALL | 55 +- LICENSE | 2 MD5 | 71 +-- NEWS |only R/RNetCDF.R | 55 +- cleanup | 6 configure | 1140 +++++++++++++++++++-------------------------------- configure.ac | 163 +++---- man/00RNetCDF.Rd | 4 man/att.copy.nc.Rd | 2 man/att.delete.nc.Rd | 2 man/att.get.nc.Rd | 2 man/att.inq.nc.Rd | 2 man/att.put.nc.Rd | 2 man/att.rename.nc.Rd | 2 man/close.nc.Rd | 2 man/create.nc.Rd | 2 man/dim.def.nc.Rd | 2 man/dim.inq.nc.Rd | 2 man/dim.rename.nc.Rd | 2 man/file.inq.nc.Rd | 2 man/open.nc.Rd | 2 man/print.nc.Rd | 2 man/read.nc.Rd | 2 man/sync.nc.Rd | 2 man/utcal.nc.Rd | 7 man/utinit.nc.Rd | 2 man/utinvcal.nc.Rd | 11 man/var.def.nc.Rd | 2 man/var.get.nc.Rd | 2 man/var.inq.nc.Rd | 2 man/var.put.nc.Rd | 2 man/var.rename.nc.Rd | 2 src/Makevars.in | 3 src/RNetCDF.c | 74 +-- tests/RNetCDF-test.R | 19 37 files changed, 718 insertions(+), 948 deletions(-)
Title: Interface to Geometry Engine - Open Source (GEOS)
Description: Interface to Geometry Engine - Open Source (GEOS) using the C API for topology operations on geometries. The GEOS library is external to the package, and, when installing the package from source, must be correctly installed first. Windows and Mac Intel OS X binaries are provided on CRAN.
Author: Roger Bivand [cre, aut],
Colin Rundel [aut],
Edzer Pebesma [ctb],
Karl Ove Hufthammer [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between rgeos versions 0.3-15 dated 2015-11-04 and 0.3-17 dated 2016-02-13
ChangeLog | 30 ++++++++++++++++++++++++++++++ DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- R/rgeos_buffer.R | 11 +++++++++-- R/rgeos_misc.R | 4 ++-- configure | 18 +++++++++--------- inst/ChangeLog | 30 ++++++++++++++++++++++++++++++ inst/SVN_VERSION | 2 +- src/rgeos_buffer.c | 4 ++++ 9 files changed, 97 insertions(+), 26 deletions(-)
Title: Tools for Quantitative Risk Management
Description: Functions and data sets for reproducing selected results from
the book "Quantitative Risk Management: Concepts, Techniques and Tools".
Furthermore, new developments and auxiliary functions for Quantitative
Risk Management practice.
Author: Marius Hofert [aut, cre], Kurt Hornik [aut]
Maintainer: Marius Hofert <marius.hofert@uwaterloo.ca>
Diff between qrmtools versions 0.0-4 dated 2016-01-15 and 0.0-5 dated 2016-02-13
qrmtools-0.0-4/qrmtools/build |only qrmtools-0.0-4/qrmtools/inst |only qrmtools-0.0-5/qrmtools/DESCRIPTION | 9 ++++----- qrmtools-0.0-5/qrmtools/MD5 | 14 ++++---------- qrmtools-0.0-5/qrmtools/vignettes/ARMA_GARCH_VaR.Rmd | 9 ++++++--- qrmtools-0.0-5/qrmtools/vignettes/VaR_bounds.Rmd | 3 +++ qrmtools-0.0-5/qrmtools/vignettes/style.css |only 7 files changed, 17 insertions(+), 18 deletions(-)
Title: Principal Component Analysis for Outlier Detection
Description: Methods to detect genetic markers involved in biological
adaptation. 'pcadapt' provides statistical tools for outlier detection based on
Principal Component Analysis.
Author: Keurcien Luu, Michael G.B. Blum
Maintainer: Keurcien Luu <keurcien.luu@imag.fr>
Diff between pcadapt versions 2.1.1 dated 2016-01-05 and 2.2 dated 2016-02-13
DESCRIPTION | 10 MD5 | 18 - NAMESPACE | 1 R/pcadapt.R | 103 ++++-- inst/doc/pcadapt.Rmd | 15 inst/doc/pcadapt.html | 748 ++++++++++++++++--------------------------------- man/computeStats.Rd | 9 man/pcadapt-package.Rd | 4 man/pcadapt.Rd | 5 vignettes/pcadapt.Rmd | 15 10 files changed, 381 insertions(+), 547 deletions(-)
Title: Draw Geographical Maps
Description: Display of maps. Projection code and larger maps are in
separate packages ('mapproj' and 'mapdata').
Author: Original S code by Richard A. Becker and Allan R. Wilks.
R version by Ray Brownrigg.
Enhancements by Thomas P Minka and Alex Deckmyn.
Maintainer: Alex Deckmyn <alex.deckmyn@meteo.be>
Diff between maps versions 3.0.2 dated 2016-01-04 and 3.1.0 dated 2016-02-13
maps-3.0.2/maps/inst/README_v3 |only maps-3.0.2/maps/src/Makefile |only maps-3.0.2/maps/src/maps.def |only maps-3.1.0/maps/DESCRIPTION | 10 maps-3.1.0/maps/MD5 | 68 maps-3.1.0/maps/NAMESPACE | 4 maps-3.1.0/maps/R/db.r | 7 maps-3.1.0/maps/R/legacy.r | 1 maps-3.1.0/maps/R/map.r | 68 maps-3.1.0/maps/R/misc.r | 41 maps-3.1.0/maps/R/polygon.r | 6 maps-3.1.0/maps/R/read.sp.R |only maps-3.1.0/maps/R/zzz.R | 5 maps-3.1.0/maps/README.md | 28 maps-3.1.0/maps/cleanup |only maps-3.1.0/maps/configure |only maps-3.1.0/maps/configure.ac |only maps-3.1.0/maps/data/lakesMapEnv.rda |only maps-3.1.0/maps/inst/NEWS.Rd | 22 maps-3.1.0/maps/inst/README.md |only maps-3.1.0/maps/man/Spatial2map.Rd |only maps-3.1.0/maps/man/internal2.Rd | 5 maps-3.1.0/maps/man/lakes.Rd |only maps-3.1.0/maps/man/map.Rd | 19 maps-3.1.0/maps/man/map.where.Rd | 3 maps-3.1.0/maps/man/world.Rd | 12 maps-3.1.0/maps/man/world2.Rd | 20 maps-3.1.0/maps/src/Makefile.in |only maps-3.1.0/maps/src/Makefile.win | 15 maps-3.1.0/maps/src/README | 13 maps-3.1.0/maps/src/convert.awk | 9 maps-3.1.0/maps/src/lakes.gon |only maps-3.1.0/maps/src/lakes.gonstats |only maps-3.1.0/maps/src/lakes.line |only maps-3.1.0/maps/src/lakes.linestats |only maps-3.1.0/maps/src/lakes.name |only maps-3.1.0/maps/src/mapget.c | 4 maps-3.1.0/maps/src/world.gon | 1600 +++---- maps-3.1.0/maps/src/world.gonstats | 2 maps-3.1.0/maps/src/world.line | 7952 ++++++++++------------------------- maps-3.1.0/maps/src/world.linestats | 2 maps-3.1.0/maps/src/world.name | 2866 ++++++------ maps-3.1.0/maps/src/world2.gon |only maps-3.1.0/maps/src/world2.gonstats |only maps-3.1.0/maps/src/world2.name |only 45 files changed, 4752 insertions(+), 8030 deletions(-)
Title: Machine Learning in R
Description: Interface to a large number of classification and regression
techniques, including machine-readable parameter descriptions. There is
also an experimental extension for survival analysis, clustering and
general, example-specific cost-sensitive learning. Generic resampling,
including cross-validation, bootstrapping and subsampling. Hyperparameter
tuning with modern optimization techniques, for single- and multi-objective
problems. Filter and wrapper methods for feature selection. Extension of
basic learners with additional operations common in machine learning, also
allowing for easy nested resampling. Most operations can be parallelized.
Author: Bernd Bischl [aut, cre],
Michel Lang [aut],
Jakob Richter [aut],
Jakob Bossek [aut],
Leonard Judt [aut],
Tobias Kuehn [aut],
Erich Studerus [aut],
Lars Kotthoff [aut],
Zachary Jones [ctb],
Schiffner Julia [aut]
Maintainer: Bernd Bischl <bernd_bischl@gmx.net>
Diff between mlr versions 2.7 dated 2015-12-04 and 2.8 dated 2016-02-13
mlr-2.7/mlr/R/benchmarkTest.R |only mlr-2.7/mlr/R/checkColumnNames.R |only mlr-2.7/mlr/R/checkDfTarget.R |only mlr-2.7/mlr/R/generateCritDifferences.R |only mlr-2.7/mlr/R/generateROCRCurves.R |only mlr-2.7/mlr/man/FilterValues.Rd |only mlr-2.7/mlr/man/LearningCurveData.Rd |only mlr-2.7/mlr/man/PartialPredictionData.Rd |only mlr-2.7/mlr/man/generateROCRCurvesData.Rd |only mlr-2.7/mlr/man/plotROCRCurves.Rd |only mlr-2.7/mlr/man/plotROCRCurvesGGVIS.Rd |only mlr-2.7/mlr/tests/run-learners.R |only mlr-2.7/mlr/tests/testthat/test_base_BMRhypothesisTests.R |only mlr-2.7/mlr/tests/testthat/test_regr_randomForest_se.R |only mlr-2.8/mlr/DESCRIPTION | 22 mlr-2.8/mlr/MD5 | 660 +++++----- mlr-2.8/mlr/NAMESPACE | 42 mlr-2.8/mlr/NEWS | 44 mlr-2.8/mlr/R/Aggregation.R | 41 mlr-2.8/mlr/R/BaseEnsemble.R | 7 mlr-2.8/mlr/R/BenchmarkResult_operators.R | 39 mlr-2.8/mlr/R/CostSensTask.R | 4 mlr-2.8/mlr/R/CostSensWeightedPairsWrapper.R | 3 mlr-2.8/mlr/R/Filter.R | 43 mlr-2.8/mlr/R/ImputeMethods.R | 3 mlr-2.8/mlr/R/Learner_properties.R | 32 mlr-2.8/mlr/R/Measure.R | 18 mlr-2.8/mlr/R/Measure_custom_resampled.R | 11 mlr-2.8/mlr/R/ModelMultiplexer.R | 11 mlr-2.8/mlr/R/MulticlassWrapper.R | 14 mlr-2.8/mlr/R/OverBaggingWrapper.R | 34 mlr-2.8/mlr/R/OverUnderSampling.R | 34 mlr-2.8/mlr/R/OverUndersampleWrapper.R | 36 mlr-2.8/mlr/R/PreprocWrapperCaret.R | 2 mlr-2.8/mlr/R/RLearner.R | 51 mlr-2.8/mlr/R/RLearner_classif_J48.R | 2 mlr-2.8/mlr/R/RLearner_classif_JRip.R | 2 mlr-2.8/mlr/R/RLearner_classif_LiblineaRL2LogReg.R | 7 mlr-2.8/mlr/R/RLearner_classif_LiblineaRL2SVC.R | 5 mlr-2.8/mlr/R/RLearner_classif_OneR.R | 2 mlr-2.8/mlr/R/RLearner_classif_PART.R | 2 mlr-2.8/mlr/R/RLearner_classif_ada.R | 6 mlr-2.8/mlr/R/RLearner_classif_avNNet.R | 2 mlr-2.8/mlr/R/RLearner_classif_bartMachine.R | 2 mlr-2.8/mlr/R/RLearner_classif_binomial.R | 2 mlr-2.8/mlr/R/RLearner_classif_blackboost.R | 2 mlr-2.8/mlr/R/RLearner_classif_boosting.R | 4 mlr-2.8/mlr/R/RLearner_classif_bst.R | 6 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mlr-2.8/mlr/tests/testthat/test_classif_LibLineaRMultiClassSVC.R | 32 mlr-2.8/mlr/tests/testthat/test_classif_LiblineaRL1L2SVC.R | 32 mlr-2.8/mlr/tests/testthat/test_classif_LiblineaRL1LogReg.R | 36 mlr-2.8/mlr/tests/testthat/test_classif_LiblineaRL2L1SVC.R | 32 mlr-2.8/mlr/tests/testthat/test_classif_LiblineaRL2LogReg.R | 43 mlr-2.8/mlr/tests/testthat/test_classif_LiblineaRL2SVC.R | 38 mlr-2.8/mlr/tests/testthat/test_classif_cforest.R | 9 mlr-2.8/mlr/tests/testthat/test_classif_cvglmnet.R |only mlr-2.8/mlr/tests/testthat/test_classif_glmnet.R | 2 mlr-2.8/mlr/tests/testthat/test_classif_randomForestSRCSyn.R |only mlr-2.8/mlr/tests/testthat/test_cluster_dbscan.R |only mlr-2.8/mlr/tests/testthat/test_featsel_FilterWrapper.R | 8 mlr-2.8/mlr/tests/testthat/test_featsel_filterFeatures.R | 14 mlr-2.8/mlr/tests/testthat/test_learners_all_classif.R | 9 mlr-2.8/mlr/tests/testthat/test_learners_all_clusters.R | 6 mlr-2.8/mlr/tests/testthat/test_learners_all_general.R | 30 mlr-2.8/mlr/tests/testthat/test_learners_all_regr.R | 12 mlr-2.8/mlr/tests/testthat/test_learners_classiflabelswitch.R | 1 mlr-2.8/mlr/tests/testthat/test_parallel_all.R | 2 mlr-2.8/mlr/tests/testthat/test_regr_LiblineaRL2L1SVR.R | 32 mlr-2.8/mlr/tests/testthat/test_regr_LiblineaRL2L2SVR.R | 38 mlr-2.8/mlr/tests/testthat/test_regr_cforest.R | 6 mlr-2.8/mlr/tests/testthat/test_regr_randomForest.R | 17 mlr-2.8/mlr/tests/testthat/test_regr_randomForestSRC.R | 3 mlr-2.8/mlr/tests/testthat/test_regr_randomForestSRCSyn.R |only mlr-2.8/mlr/tests/testthat/test_stack.R | 10 mlr-2.8/mlr/tests/testthat/test_surv_cforest.R | 7 mlr-2.8/mlr/tests/testthat/test_surv_cvglmnet.R | 2 mlr-2.8/mlr/tests/testthat/test_tune_ModelMultiplexer.R | 34 mlr-2.8/mlr/tests/testthat/test_tune_tuneIrace.R | 19 mlr-2.8/mlr/tests/testthat/test_tune_tuneMBO.R | 22 349 files changed, 2874 insertions(+), 2227 deletions(-)