Sat, 18 Jun 2016

Package rslurm updated to version 0.3.1 with previous version 0.3.0 dated 2016-05-27

Title: Submit R Calculations to a 'SLURM' Cluster
Description: Functions that simplify the R interface the 'SLURM' cluster workload manager, and automate the process of dividing a parallel calculation across cluster nodes.
Author: Philippe Marchand [aut, cre], Mike Smorul [ctb]
Maintainer: Philippe Marchand <pmarchand@sesync.org>

Diff between rslurm versions 0.3.0 dated 2016-05-27 and 0.3.1 dated 2016-06-18

 DESCRIPTION                         |    6 +++---
 MD5                                 |   16 ++++++++--------
 NEWS.md                             |   14 +++++++++++++-
 R/slurm_apply.R                     |    4 +++-
 R/slurm_call.R                      |    4 +++-
 R/slurm_utils.R                     |    3 ++-
 inst/templates/submit_sh.txt        |    2 +-
 inst/templates/submit_single_sh.txt |    2 +-
 tests/testthat/test_slurm_call.R    |    4 +++-
 9 files changed, 37 insertions(+), 18 deletions(-)

More information about rslurm at CRAN
Permanent link

Package ROI.plugin.symphony updated to version 0.2-1 with previous version 0.0-2 dated 2013-11-28

Title: ROI Plug-in SYMPHONY
Description: Enhances the R Optimization Infrastructure (ROI) package by registering the SYMPHONY open-source solver from the COIN-OR suite. It allows for solving mixed integer linear programming (MILP) problems as well as all variants/combinations of LP, IP.
Author: Stefan Theussl [aut, cre]
Maintainer: Stefan Theussl <Stefan.Theussl@R-Project.org>

Diff between ROI.plugin.symphony versions 0.0-2 dated 2013-11-28 and 0.2-1 dated 2016-06-18

 DESCRIPTION |   21 +++++++++--------
 MD5         |    8 +++---
 NAMESPACE   |    1 
 R/plugin.R  |   71 +++++++++++++++++++++++++++++++++++++++++-------------------
 R/zzz.R     |   20 ++++++++++++----
 5 files changed, 80 insertions(+), 41 deletions(-)

More information about ROI.plugin.symphony at CRAN
Permanent link

Package ROI.plugin.quadprog updated to version 0.2-1 with previous version 0.0-2 dated 2013-11-28

Title: ROI Plug-in {quadprog}
Description: Enhances the R Optimization Infrastructure (ROI) package by registering the quadprog solver. It allows for solving quadratic programming (QP) problems.
Author: Stefan Theussl [aut, cre]
Maintainer: Stefan Theussl <Stefan.Theussl@R-Project.org>

Diff between ROI.plugin.quadprog versions 0.0-2 dated 2013-11-28 and 0.2-1 dated 2016-06-18

 DESCRIPTION |   18 +++++++++---------
 MD5         |    8 ++++----
 NAMESPACE   |    1 +
 R/plugin.R  |   20 ++++++++++----------
 R/zzz.R     |   19 ++++++++++++++-----
 5 files changed, 38 insertions(+), 28 deletions(-)

More information about ROI.plugin.quadprog at CRAN
Permanent link

Package ROI updated to version 0.2-1 with previous version 0.1-0 dated 2013-11-28

Title: R Optimization Infrastructure
Description: The R Optimization Infrastructure (ROI) is a sophisticated framework for handling optimization problems in R.
Author: Kurt Hornik [aut], David Meyer [aut], Florian Schwendinger [aut], Stefan Theussl [aut, cre], Diethelm Wuertz [ctb]
Maintainer: Stefan Theussl <Stefan.Theussl@R-Project.org>

Diff between ROI versions 0.1-0 dated 2013-11-28 and 0.2-1 dated 2016-06-18

 ROI-0.1-0/ROI/R/status_codes.R                          |only
 ROI-0.1-0/ROI/man/ROI_available_solvers.Rd              |only
 ROI-0.1-0/ROI/man/ROI_installed_solvers.Rd              |only
 ROI-0.1-0/ROI/man/as.F_objective.Rd                     |only
 ROI-0.1-0/ROI/man/as.L_constraint.Rd                    |only
 ROI-0.1-0/ROI/man/as.L_objective.Rd                     |only
 ROI-0.1-0/ROI/man/as.OP.Rd                              |only
 ROI-0.1-0/ROI/man/as.Q_constraint.Rd                    |only
 ROI-0.1-0/ROI/man/as.Q_objective.Rd                     |only
 ROI-0.1-0/ROI/man/as.constraint.Rd                      |only
 ROI-0.1-0/ROI/man/as.objective.Rd                       |only
 ROI-0.1-0/ROI/man/bounds-replace.Rd                     |only
 ROI-0.1-0/ROI/man/bounds.OP.Rd                          |only
 ROI-0.1-0/ROI/man/bounds.Rd                             |only
 ROI-0.1-0/ROI/man/constraints-replace.Rd                |only
 ROI-0.1-0/ROI/man/constraints.OP.Rd                     |only
 ROI-0.1-0/ROI/man/is.L_constraint.Rd                    |only
 ROI-0.1-0/ROI/man/is.Q_constraint.Rd                    |only
 ROI-0.1-0/ROI/man/length.L_constraint.Rd                |only
 ROI-0.1-0/ROI/man/rbind.L_constraint.Rd                 |only
 ROI-0.2-1/ROI/DESCRIPTION                               |   29 
 ROI-0.2-1/ROI/MD5                                       |  128 +-
 ROI-0.2-1/ROI/NAMESPACE                                 |  210 ++-
 ROI-0.2-1/ROI/R/OP.R                                    |  181 ++-
 ROI-0.2-1/ROI/R/bounds.R                                |  437 ++++++-
 ROI-0.2-1/ROI/R/constraints.R                           |  948 ++++++++++++----
 ROI-0.2-1/ROI/R/doc_data.R                              |only
 ROI-0.2-1/ROI/R/errors.R                                |only
 ROI-0.2-1/ROI/R/gradient.R                              |   73 +
 ROI-0.2-1/ROI/R/objective.R                             |  341 +++--
 ROI-0.2-1/ROI/R/plugin.R                                |only
 ROI-0.2-1/ROI/R/plugin_nlminb.R                         |  412 ++++++
 ROI-0.2-1/ROI/R/roi.R                                   |  372 +++---
 ROI-0.2-1/ROI/R/solution.R                              |  105 +
 ROI-0.2-1/ROI/R/solver.R                                |   19 
 ROI-0.2-1/ROI/R/types.R                                 |   10 
 ROI-0.2-1/ROI/R/utilities.R                             |  209 +++
 ROI-0.2-1/ROI/R/zzz.R                                   |   68 -
 ROI-0.2-1/ROI/data                                      |only
 ROI-0.2-1/ROI/inst                                      |only
 ROI-0.2-1/ROI/man/Bounds_Accessor_Mutator.Rd            |only
 ROI-0.2-1/ROI/man/C_bound.Rd                            |only
 ROI-0.2-1/ROI/man/F_constraint.Rd                       |   68 -
 ROI-0.2-1/ROI/man/F_objective.Rd                        |   37 
 ROI-0.2-1/ROI/man/G.Rd                                  |   19 
 ROI-0.2-1/ROI/man/J.Rd                                  |only
 ROI-0.2-1/ROI/man/L_constraint.Rd                       |   66 -
 ROI-0.2-1/ROI/man/L_objective.Rd                        |   43 
 ROI-0.2-1/ROI/man/NO_constraint.Rd                      |only
 ROI-0.2-1/ROI/man/OP.Rd                                 |   98 +
 ROI-0.2-1/ROI/man/Q_constraint.Rd                       |   78 -
 ROI-0.2-1/ROI/man/Q_objective.Rd                        |   49 
 ROI-0.2-1/ROI/man/ROI_applicable_solvers.Rd             |only
 ROI-0.2-1/ROI/man/ROI_bound.Rd                          |only
 ROI-0.2-1/ROI/man/ROI_constraint.Rd                     |only
 ROI-0.2-1/ROI/man/ROI_options.Rd                        |only
 ROI-0.2-1/ROI/man/ROI_plugin_add_status_code_to_db.Rd   |only
 ROI-0.2-1/ROI/man/ROI_plugin_canonicalize_solution.Rd   |only
 ROI-0.2-1/ROI/man/ROI_plugin_get_solver_name.Rd         |only
 ROI-0.2-1/ROI/man/ROI_plugin_make_signature.Rd          |only
 ROI-0.2-1/ROI/man/ROI_plugin_register_solver_control.Rd |only
 ROI-0.2-1/ROI/man/ROI_plugin_register_solver_method.Rd  |only
 ROI-0.2-1/ROI/man/ROI_registered_solvers.Rd             |   26 
 ROI-0.2-1/ROI/man/ROI_solve.Rd                          |   71 -
 ROI-0.2-1/ROI/man/US30.Rd                               |only
 ROI-0.2-1/ROI/man/V_bound.Rd                            |   48 
 ROI-0.2-1/ROI/man/as.L_term.Rd                          |only
 ROI-0.2-1/ROI/man/as.Q_term.Rd                          |only
 ROI-0.2-1/ROI/man/constraints.Rd                        |   27 
 ROI-0.2-1/ROI/man/equal.Rd                              |only
 ROI-0.2-1/ROI/man/nlminb2.Rd                            |only
 ROI-0.2-1/ROI/man/objective.Rd                          |   24 
 ROI-0.2-1/ROI/man/rbind.constraint.Rd                   |only
 ROI-0.2-1/ROI/man/solution.Rd                           |only
 ROI-0.2-1/ROI/man/types.Rd                              |   23 
 ROI-0.2-1/ROI/man/vech.Rd                               |only
 76 files changed, 3169 insertions(+), 1050 deletions(-)

More information about ROI at CRAN
Permanent link

Package PSF updated to version 0.2.1 with previous version 0.1.1 dated 2016-04-17

Title: Algorithm for Pattern Sequence Based Forecasting
Description: Various functions in Pattern Sequence Based Forecasting (PSF) takes time series data as input and assist to forecast the future value with the help of Algorithm PSF. This algorithm forecasts the behavior of time series based on similarity of pattern sequences. Initially, clustering is done with the labeling of samples from database. The labels associated with samples are then used for forecasting the future behaviour of time series data. The further technical details and references regarding PSF are discussed in Vignette.
Author: Neeraj Bokde
Maintainer: Neeraj Bokde <neerajdhanraj@gmail.com>

Diff between PSF versions 0.1.1 dated 2016-04-17 and 0.2.1 dated 2016-06-18

 DESCRIPTION                |   10 ++-
 MD5                        |   12 ++--
 R/Mean_Errors.R            |    4 -
 R/pred_for_w_plot.R        |  121 +++++++++++++++++++++++----------------------
 inst/doc/PSF_vignette.html |   15 ++---
 man/mae.Rd                 |    2 
 man/rmse.Rd                |    2 
 7 files changed, 86 insertions(+), 80 deletions(-)

More information about PSF at CRAN
Permanent link

Package OUwie updated to version 1.50 with previous version 1.49 dated 2016-02-28

Title: Analysis of Evolutionary Rates in an OU Framework
Description: Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck-based Hansen models that allow the strength of selection and stochastic motion to vary across selective regimes.
Author: Jeremy M. Beaulieu <jbeaulieu@nimbios.org>, Brian O'Meara <bomeara@utk.edu>
Maintainer: Jeremy Beaulieu <jbeaulieu@nimbios.org>

Diff between OUwie versions 1.49 dated 2016-02-28 and 1.50 dated 2016-06-18

 DESCRIPTION        |   14 ++---
 MD5                |   36 +++++++-------
 NAMESPACE          |    3 -
 R/OUwie.R          |  135 ++++++++++++++++++++++++++++++++++++-----------------
 R/OUwie.boot.R     |   16 ++++--
 R/OUwie.fixed.R    |   98 +++++++++++++++++++++-----------------
 R/OUwie.joint.R    |   22 +++++---
 R/OUwie.sim.R      |   19 +++++--
 R/OUwie.slice.R    |  118 +++++++++++++++++++++++++++++++---------------
 R/expect.trendy.R  |    4 -
 R/hOUwie.R         |    9 +--
 R/varcov.ou.R      |    9 ++-
 R/weight.mat.R     |    6 +-
 man/OUwie.Rd       |   22 ++++++--
 man/OUwie.boot.Rd  |    5 +
 man/OUwie.fixed.Rd |    9 ++-
 man/OUwie.joint.Rd |   13 +++--
 man/OUwie.sim.Rd   |    5 +
 man/OUwie.slice.Rd |   20 +++++--
 19 files changed, 361 insertions(+), 202 deletions(-)

More information about OUwie at CRAN
Permanent link

Package btergm updated to version 1.7.6 with previous version 1.7.3 dated 2016-04-21

Title: Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
Description: Temporal Exponential Random Graph Models (TERGM) estimated by maximum pseudolikelihood with bootstrapped confidence intervals or Markov Chain Monte Carlo maximum likelihood. Goodness of fit assessment for ERGMs, TERGMs, and SAOMs. Micro-level interpretation of ERGMs and TERGMs.
Author: Philip Leifeld [aut, cre], Skyler J. Cranmer [ctb], Bruce A. Desmarais [ctb]
Maintainer: Philip Leifeld <philip.leifeld@glasgow.ac.uk>

Diff between btergm versions 1.7.3 dated 2016-04-21 and 1.7.6 dated 2016-06-18

 DESCRIPTION         |   18 +-
 MD5                 |   17 +-
 NAMESPACE           |  249 +++++++++++++++++------------------
 R/btergm.R          |   22 ++-
 R/interpretation.R  |  369 +++++++++++++++++++++++++++++++---------------------
 R/mtergm.R          |    9 -
 R/tergmprepare.R    |    1 
 man/btergm-class.Rd |    9 -
 man/edgeprob.Rd     |only
 man/interpret.Rd    |   98 ++++++++++++-
 10 files changed, 483 insertions(+), 309 deletions(-)

More information about btergm at CRAN
Permanent link

Package xmlparsedata updated to version 1.0.1 with previous version 1.0.0 dated 2016-05-20

Title: Parse Data of 'R' Code as an 'XML' Tree
Description: Convert the output of 'utils::getParseData()' to an 'XML' tree, that is searchable and easier to manipulate in general.
Author: Gábor Csárdi
Maintainer: Gábor Csárdi <gcsardi@mango-solutions.com>

Diff between xmlparsedata versions 1.0.0 dated 2016-05-20 and 1.0.1 dated 2016-06-18

 DESCRIPTION           |    6 +++---
 MD5                   |    8 ++++----
 NEWS.md               |    9 +++++++++
 R/package.R           |    8 +++++++-
 tests/testthat/test.R |   16 +++++++++++++++-
 5 files changed, 38 insertions(+), 9 deletions(-)

More information about xmlparsedata at CRAN
Permanent link

Package REAT updated to version 1.1.0 with previous version 1.0.0 dated 2016-04-27

Title: Regional Economic Analysis Tools
Description: Collection of analysis methods used in regional and urban economics and (quantitative) economic geography, e.g. measures of inequality, regional disparities, regional specialization and spatial interaction models.
Author: Thomas Wieland
Maintainer: Thomas Wieland <thomas.wieland.geo@googlemail.com>

Diff between REAT versions 1.0.0 dated 2016-04-27 and 1.1.0 dated 2016-06-18

 DESCRIPTION          |   10 ++--
 MD5                  |   64 ++++++++++++++++++-------------
 NAMESPACE            |    2 
 R/converse.R         |only
 R/cv.R               |   22 +++++-----
 R/data.index.R       |   14 +++---
 R/disp.R             |   16 +++----
 R/gini.R             |  105 ++++++++++++++++++++++++++-------------------------
 R/gini.conc.R        |   42 +++++++++++---------
 R/gini.spec.R        |   44 ++++++++++++---------
 R/hansen.R           |only
 R/herf.R             |   24 +++++------
 R/herf.eq.R          |    6 +-
 R/huff.R             |only
 R/krugman.spec.R     |   20 +++++----
 R/locq.R             |   14 +++---
 R/portfolio.R        |   50 +++++++++++++-----------
 R/reilly.R           |only
 R/reilly.lambda.R    |only
 R/shift.R            |   33 +++++++---------
 data/Freiburg.rda    |binary
 data/Freiburg1.rda   |only
 data/Freiburg2.rda   |only
 man/Freiburg1.Rd     |only
 man/Freiburg2.Rd     |only
 man/REAT-package.Rd  |    5 +-
 man/converse.Rd      |only
 man/cv.Rd            |    2 
 man/disp.Rd          |    4 -
 man/gini.Rd          |   14 +++---
 man/hansen.Rd        |only
 man/herf.Rd          |    4 -
 man/herf.eq.Rd       |    2 
 man/huff.Rd          |only
 man/krugman.spec.Rd  |    2 
 man/locq.Rd          |   10 ++--
 man/portfolio.Rd     |   10 ++--
 man/reilly.Rd        |only
 man/reilly.lambda.Rd |only
 man/shift.Rd         |   11 ++++-
 40 files changed, 291 insertions(+), 239 deletions(-)

More information about REAT at CRAN
Permanent link

Package photobiologyInOut updated to version 0.4.5 with previous version 0.4.4 dated 2016-05-24

Title: Read Spectral Data from Foreign Files
Description: Functions for reading and writing foreign files containing spectral data from spectrometers and their associated software, and output from simulation models in common use. As well as functions for exchange of spectral data with other R packages.
Author: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>
Maintainer: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>

Diff between photobiologyInOut versions 0.4.4 dated 2016-05-24 and 0.4.5 dated 2016-06-18

 DESCRIPTION                          |   17 
 MD5                                  |   35 
 NAMESPACE                            |   10 
 NEWS                                 |   16 
 R/foreign-conversion.r               |  397 +++
 R/read-libradtran-vesa.r             |    6 
 R/read-oopi-file.r                   |only
 build/vignette.rds                   |binary
 inst/doc/user-guide.R                |   26 
 inst/doc/user-guide.Rnw              |   40 
 inst/doc/user-guide.pdf              | 3724 +++++++++++++++++++----------------
 man/colorSpec2mspct.Rd               |only
 man/hyperSpec2mspct.Rd               |   43 
 man/photobiologyInOut-package.Rd     |    3 
 man/read_oo_pidata.Rd                |only
 man/rspec2mspct.Rd                   |   58 
 tests/testthat/data-test/spectrum.pi |only
 tests/testthat/test-foreign.R        |only
 tests/testthat/test-oo.R             |   26 
 vignettes/user-guide-concordance.tex |   11 
 vignettes/user-guide.Rnw             |   40 
 21 files changed, 2720 insertions(+), 1732 deletions(-)

More information about photobiologyInOut at CRAN
Permanent link

Package ggpmisc updated to version 0.2.9 with previous version 0.2.8 dated 2016-05-22

Title: Miscellaneous Extensions to 'ggplot2'
Description: Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Provides new statistics to locate and tag peaks and valleys in 2D plots, a statistics to add a label with the equation of a polynomial fitted with lm(), or R^2 or adjusted R^2 or information criteria for any model fitted with function lm(). Additional statistics give access to functions in package 'broom'. Provides a function for flexibly converting time series to data frames suitable for plotting with ggplot(). In addition provides two statistics and two geometries useful for diagnosing what data are passed to compute_group() and compute_panel() functions and to geometries.
Author: Pedro J. Aphalo [aut, cre]
Maintainer: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>

Diff between ggpmisc versions 0.2.8 dated 2016-05-22 and 0.2.9 dated 2016-06-18

 DESCRIPTION             |   23 +++---
 MD5                     |   32 ++++-----
 NEWS                    |    8 ++
 R/geom-debug.R          |   11 +--
 R/ggpmisc.R             |    5 +
 R/stat-fit-broom.R      |  136 ++++++++++++++++++++++++++++++++++-------
 R/stat-fit-residuals.R  |    1 
 R/stat-poly-eq.R        |   61 +++++++++++++-----
 build/vignette.rds      |binary
 inst/doc/examples.R     |   91 ++++++++++++++++++++++++++-
 inst/doc/examples.Rmd   |  112 +++++++++++++++++++++++++++++++---
 inst/doc/examples.html  |  158 ++++++++++++++++++++++++++++++++++++++----------
 man/geom_debug.Rd       |    5 -
 man/ggpmisc-package.Rd  |   13 ++-
 man/stat_fit_augment.Rd |   26 ++++++-
 man/stat_poly_eq.Rd     |    8 +-
 vignettes/examples.Rmd  |  112 +++++++++++++++++++++++++++++++---
 17 files changed, 665 insertions(+), 137 deletions(-)

More information about ggpmisc at CRAN
Permanent link

New package heuristica with initial version 1.0.0
Package: heuristica
Title: Heuristics Including Take the Best and Unit-Weight Linear
Version: 1.0.0
Authors@R: c( person("Jean", "Whitmore", email = "jeanimal@gmail.com", role = c("aut", "cre")), person("Daniel", "Barkoczi", email = "barkoczi@mpib-berlin.mpg.de", role = "aut") )
Description: Implements various heuristics like Take The Best and unit-weight linear, which do two-alternative choice: which of two objects will have a higher criterion? Also offers functions to assess performance, e.g. percent correct across all row pairs in a data set and finding row pairs where models disagree. New models can be added by implementing a fit and predict function-- see vignette.
Depends: R (>= 3.1.0)
License: MIT + file LICENSE
LazyData: true
Imports: Hmisc
URL: https://github.com/jeanimal/heuristica
BugReports: https://github.com/jeanimal/heuristica/issues
Suggests: devtools, ggplot2, glmnet, knitr, plyr, reshape, reshape2, testthat, rmarkdown
VignetteBuilder: knitr
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-06-18 03:03:57 UTC; jeanwhitmore
Author: Jean Whitmore [aut, cre], Daniel Barkoczi [aut]
Maintainer: Jean Whitmore <jeanimal@gmail.com>
Repository: CRAN
Date/Publication: 2016-06-18 15:31:12

More information about heuristica at CRAN
Permanent link

Package extraDistr updated to version 1.7.1 with previous version 1.7.0 dated 2016-06-13

Title: Additional Univariate and Multivariate Distributions
Description: Density, distribution function, quantile function and random generation for a number of univariate and multivariate distributions.
Author: Tymoteusz Wolodzko
Maintainer: Tymoteusz Wolodzko <twolodzko+extraDistr@gmail.com>

Diff between extraDistr versions 1.7.0 dated 2016-06-13 and 1.7.1 dated 2016-06-18

 DESCRIPTION                                      |    9 +
 MD5                                              |  106 ++++++++++++-----------
 NAMESPACE                                        |    6 +
 NEWS.md                                          |    8 +
 R/RcppExports.R                                  |   24 +++++
 R/beta-binomial-distribution.R                   |    8 +
 R/beta-negative-binomial-distribution.R          |    8 +
 R/beta-prime-distribution.R                      |only
 R/bivariate-normal-distribution.R                |   14 ++-
 R/bivariate-poisson-distribution.R               |    6 +
 R/categorical-distribution.R                     |    6 -
 R/dirichlet-distribution.R                       |    4 
 R/dirichlet-multinomial-distribution.R           |only
 R/discrete-weibull-distribution.R                |    2 
 R/gamma-poisson-distribution.R                   |    6 +
 R/gev-distribution.R                             |    4 
 R/gpd-distribution.R                             |    4 
 R/logarithmic-series-distribution.R              |    4 
 R/mixture-of-normal-distributions.R              |    2 
 R/mixture-of-poisson-distributions.R             |    2 
 R/power-distribution.R                           |    2 
 R/triangular-distribution.R                      |    2 
 R/truncated-normal-distribution.R                |    4 
 R/zero-inflated-negative-binomial-distribution.R |    2 
 man/BetaBinom.Rd                                 |    8 +
 man/BetaNegBinom.Rd                              |    8 +
 man/BetaPrime.Rd                                 |only
 man/BivNormal.Rd                                 |   15 ++-
 man/BivPoiss.Rd                                  |    7 +
 man/Categorical.Rd                               |    4 
 man/DirMnom.Rd                                   |only
 man/Dirichlet.Rd                                 |    4 
 man/DiscrWeibull.Rd                              |    2 
 man/GEV.Rd                                       |    4 
 man/GPD.Rd                                       |    4 
 man/GammaPoiss.Rd                                |    6 +
 man/LogSeries.Rd                                 |    4 
 man/NormalMix.Rd                                 |    2 
 man/PoissonMix.Rd                                |    2 
 man/PowerDist.Rd                                 |    2 
 man/Triangular.Rd                                |    2 
 man/TruncNormal.Rd                               |    4 
 man/ZINB.Rd                                      |    2 
 src/RcppExports.cpp                              |   88 +++++++++++++++++++
 src/beta-binomial-distribution.cpp               |    5 -
 src/beta-negative-binomial-distribution.cpp      |    5 -
 src/beta-prime-distribution.cpp                  |only
 src/categorical-distribution.cpp                 |    4 
 src/dirichlet-multinomial-distribution.cpp       |only
 src/discrete-uniform-distribution.cpp            |   12 --
 src/gamma-poisson-distribution.cpp               |    5 -
 src/shared.cpp                                   |    2 
 tests/testthat/test-inappropriate-parameters.R   |   16 +++
 tests/testthat/test-infinity.R                   |    4 
 tests/testthat/test-multivariate-distributions.R |   14 ++-
 tests/testthat/test-non-negative.R               |    1 
 tests/testthat/test-quantile-functions.R         |    3 
 57 files changed, 352 insertions(+), 120 deletions(-)

More information about extraDistr at CRAN
Permanent link

New package callr with initial version 1.0.0
Package: callr
Title: Call R from R
Version: 1.0.0
Author: Gábor Csárdi
Maintainer: Gábor Csárdi <gcsardi@mango-solutions.com>
Description: It is sometimes useful to perform a computation in a separate R process, without affecting the current R process at all. This packages does exactly that.
License: MIT + file LICENSE
LazyData: true
URL: https://github.com/MangoTheCat/callr
BugReports: https://github.com/MangoTheCat/callr/issues
RoxygenNote: 5.0.1.9000
Suggests: covr, testthat
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2016-06-17 21:09:31 UTC; gaborcsardi
Repository: CRAN
Date/Publication: 2016-06-18 15:24:15

More information about callr at CRAN
Permanent link

Package matrixpls updated to version 1.0.1 with previous version 1.0.0 dated 2016-06-13

Title: Matrix-Based Partial Least Squares Estimation
Description: Partial Least Squares Path Modeling algorithm and related algorithms. The algorithm implementations aim for computational efficiency using matrix algebra and covariance data. The package is designed toward Monte Carlo simulations and includes functions to perform simple Monte Carlo simulations.
Author: Mikko Rönkkö [aut, cre]
Maintainer: Mikko Rönkkö <mikko.ronkko@aalto.fi>

Diff between matrixpls versions 1.0.0 dated 2016-06-13 and 1.0.1 dated 2016-06-18

 DESCRIPTION        |    8 ++---
 MD5                |    8 ++---
 R/matrixpls.boot.R |   79 ++++++++++++++++++++++++++++++++++++++++-------------
 R/matrixpls.util.R |    2 -
 R/paramEstimator.R |    3 ++
 5 files changed, 72 insertions(+), 28 deletions(-)

More information about matrixpls at CRAN
Permanent link

Package denovolyzeR updated to version 0.1.1 with previous version 0.1.0 dated 2015-04-09

Title: Statistical Analyses of De Novo Genetic Variants
Description: An integrated toolset for the analysis of de novo (sporadic) genetic sequence variants. denovolyzeR implements a mutational model that estimates the probability of a de novo genetic variant arising in each human gene, from which one can infer the expected number of de novo variants in a given population size. Observed variant frequencies can then be compared against expectation in a Poisson framework. denovolyzeR provides a suite of functions to implement these analyses for the interpretation of de novo variation in human disease.
Author: James Ware [aut, cre], Jason Homsy [ctb], Kaitlin Samocha [ctb]
Maintainer: James Ware <j.ware@imperial.ac.uk>

Diff between denovolyzeR versions 0.1.0 dated 2015-04-09 and 0.1.1 dated 2016-06-18

 denovolyzeR-0.1.0/denovolyzeR/R/fmrpGenes.doc.R               |only
 denovolyzeR-0.1.1/denovolyzeR/DESCRIPTION                     |   25 +-
 denovolyzeR-0.1.1/denovolyzeR/MD5                             |   37 ++-
 denovolyzeR-0.1.1/denovolyzeR/NAMESPACE                       |    3 
 denovolyzeR-0.1.1/denovolyzeR/R/FMRPgenes.doc.R               |only
 denovolyzeR-0.1.1/denovolyzeR/R/autismDeNovos.doc.R           |    1 
 denovolyzeR-0.1.1/denovolyzeR/R/denovolyze.R                  |    9 
 denovolyzeR-0.1.1/denovolyzeR/build/vignette.rds              |binary
 denovolyzeR-0.1.1/denovolyzeR/inst/CITATION                   |only
 denovolyzeR-0.1.1/denovolyzeR/inst/doc/denovolyzeR_intro.R    |    9 
 denovolyzeR-0.1.1/denovolyzeR/inst/doc/denovolyzeR_intro.Rmd  |   25 +-
 denovolyzeR-0.1.1/denovolyzeR/inst/doc/denovolyzeR_intro.html |   93 +++++-----
 denovolyzeR-0.1.1/denovolyzeR/man/PermuteMultiHits.Rd         |    2 
 denovolyzeR-0.1.1/denovolyzeR/man/autismDeNovos.Rd            |    5 
 denovolyzeR-0.1.1/denovolyzeR/man/denovolyze.Rd               |   10 -
 denovolyzeR-0.1.1/denovolyzeR/man/denovolyzeMultiHits.Rd      |   13 -
 denovolyzeR-0.1.1/denovolyzeR/man/denovolyzeR.Rd              |    2 
 denovolyzeR-0.1.1/denovolyzeR/man/fmrpGenes.Rd                |    7 
 denovolyzeR-0.1.1/denovolyzeR/man/parseInput.Rd               |    2 
 denovolyzeR-0.1.1/denovolyzeR/man/viewProbabilityTable.Rd     |    2 
 denovolyzeR-0.1.1/denovolyzeR/vignettes/denovolyzeR_intro.Rmd |   25 +-
 21 files changed, 147 insertions(+), 123 deletions(-)

More information about denovolyzeR at CRAN
Permanent link

Package xergm.common updated to version 1.7.4 with previous version 1.7.3 dated 2016-06-13

Title: Common Infrastructure for Extensions of Exponential Random Graph Models
Description: Datasets and definitions of generic functions used in dependencies of the 'xergm' package.
Author: Philip Leifeld [aut, cre], Skyler J. Cranmer [ctb], Bruce A. Desmarais [ctb]
Maintainer: Philip Leifeld <philip.leifeld@glasgow.ac.uk>

Diff between xergm.common versions 1.7.3 dated 2016-06-13 and 1.7.4 dated 2016-06-18

 DESCRIPTION          |   15 ++++---
 MD5                  |   14 +++----
 NAMESPACE            |   34 +++++++----------
 R/preprocess.R       |   99 ++++++++++++++++++++++++++++++++++++++++++++-------
 data/alliances.RData |binary
 data/chemnet.rda     |binary
 data/knecht.rda      |binary
 man/adjust.Rd        |   43 ++++++++++++++++++++++
 8 files changed, 160 insertions(+), 45 deletions(-)

More information about xergm.common at CRAN
Permanent link

Package usl updated to version 1.6.0 with previous version 1.5.0 dated 2016-02-25

Title: Analyze System Scalability with the Universal Scalability Law
Description: The Universal Scalability Law is a model to predict hardware and software scalability. It uses system capacity as a function of load to forecast the scalability for the system.
Author: Neil J. Gunther [aut], Stefan Moeding [aut, cre]
Maintainer: Stefan Moeding <stm@moeding.net>

Diff between usl versions 1.5.0 dated 2016-02-25 and 1.6.0 dated 2016-06-18

 DESCRIPTION                 |   10 
 MD5                         |   21 -
 NEWS                        |    7 
 R/confint.R                 |   11 
 README.md                   |    2 
 build/vignette.rds          |binary
 inst/doc/usl.R              |  224 +++++-------------
 inst/doc/usl.Rnw            |  541 +++++++++++++++++++++++++++-----------------
 inst/doc/usl.pdf            |binary
 man/confint-USL-method.Rd   |    5 
 vignettes/usl-orausl2-1.pdf |only
 vignettes/usl.Rnw           |  541 +++++++++++++++++++++++++++-----------------
 12 files changed, 762 insertions(+), 600 deletions(-)

More information about usl at CRAN
Permanent link

Package rsdmx updated to version 0.5-4 with previous version 0.5-3 dated 2016-03-16

Title: Tools for Reading SDMX Data and Metadata
Description: Set of classes and methods to read data and metadata documents exchanged through the Statistical Data and Metadata Exchange (SDMX) framework, currently focusing on the SDMX XML standard format (SDMX-ML).
Author: Emmanuel Blondel [aut, cre], Matthieu Stigler [ctb]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>

Diff between rsdmx versions 0.5-3 dated 2016-03-16 and 0.5-4 dated 2016-06-18

 DESCRIPTION                        |    8 ++++----
 MD5                                |   22 +++++++++++-----------
 R/SDMXConceptScheme-methods.R      |    2 +-
 R/SDMXDataStructure-methods.R      |    2 +-
 R/SDMXDataStructures-methods.R     |   14 +++++++++-----
 R/SDMXServiceProvider-methods.R    |   25 ++++++++++++++++++++++++-
 R/readSDMX.R                       |   37 ++++++++++++++++---------------------
 R/rsdmx.R                          |    4 ++--
 README.md                          |    2 +-
 inst/doc/quickstart.html           |   33 +++++++++++++++------------------
 man/rsdmx.Rd                       |    4 ++--
 tests/testthat/test_Main_Helpers.R |   35 +++++++++++++++++++++++++++++++++++
 12 files changed, 121 insertions(+), 67 deletions(-)

More information about rsdmx at CRAN
Permanent link

Package rcss updated to version 1.1 with previous version 1.0 dated 2016-05-29

Title: Convex Switching Systems
Description: The numerical treatment of optimal switching problems in a finite time setting when the state evolves as a controlled Markov chain consisting of a uncontrolled continuous component following linear dynamics and a controlled Markov chain taking values in a finite set. The reward functions are assumed to be convex and Lipschitz continuous in the continuous state. The action set is finite.
Author: Juri Hinz and Jeremy Yee
Maintainer: Jeremy Yee <jeremyyee@outlook.com.au>

Diff between rcss versions 1.0 dated 2016-05-29 and 1.1 dated 2016-06-18

 DESCRIPTION                  |   10 ++++++----
 MD5                          |   28 ++++++++++++++--------------
 src/accelerated.cpp          |    2 ++
 src/bellman_accelerated.cpp  |    2 ++
 src/bellman_optimal.cpp      |    2 ++
 src/bellman_optimal2.cpp     |    2 ++
 src/duality.cpp              |    1 -
 src/expected_accelerated.cpp |    2 ++
 src/fast.cpp                 |    2 ++
 src/fast_martingale.cpp      |    2 ++
 src/martingale.cpp           |    2 ++
 src/path.cpp                 |    2 ++
 src/slow.cpp                 |    2 ++
 src/stochastic_grid.cpp      |    2 ++
 src/test_policy.cpp          |    4 ++--
 15 files changed, 44 insertions(+), 21 deletions(-)

More information about rcss at CRAN
Permanent link

Package purrr updated to version 0.2.2 with previous version 0.2.1 dated 2016-02-12

Title: Functional Programming Tools
Description: Make your pure functions purr with the 'purrr' package. This package completes R's functional programming tools with missing features present in other programming languages.
Author: Hadley Wickham [aut, cre], Lionel Henry [ctb], RStudio [cph]
Maintainer: Hadley Wickham <hadley@rstudio.com>

Diff between purrr versions 0.2.1 dated 2016-02-12 and 0.2.2 dated 2016-06-18

 DESCRIPTION                       |    8 +++---
 MD5                               |   44 +++++++++++++++++++-------------------
 NAMESPACE                         |    2 +
 NEWS.md                           |   11 +++++++++
 R/invoke.R                        |   39 +++++++++++++++++++++------------
 R/map.R                           |    6 ++---
 R/partial.R                       |    4 +--
 R/reduce.R                        |   14 ++++++++++--
 R/rows.R                          |    2 -
 R/set_names.R                     |    2 -
 R/transpose.R                     |    2 -
 R/utils.R                         |   42 ++++++++++++++----------------------
 R/when.R                          |    2 -
 README.md                         |    2 -
 man/as_function.Rd                |    2 -
 man/invoke.Rd                     |   19 ++++++++++------
 man/map.Rd                        |    4 +--
 man/partial.Rd                    |    4 +--
 man/transpose.Rd                  |    2 -
 man/when.Rd                       |    2 -
 src/extract.c                     |only
 tests/testthat/test-as-function.R |   36 +++++++++++++++++++++++++++++++
 tests/testthat/test-invoke.R      |   21 ++++++++++++++++++
 tests/testthat/test-reduce.R      |only
 24 files changed, 180 insertions(+), 90 deletions(-)

More information about purrr at CRAN
Permanent link

Package mvMORPH updated to version 1.0.7 with previous version 1.0.6 dated 2015-08-24

Title: Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
Description: Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees and time series.
Author: Julien Clavel, with contributions from Aaron King, and Emmanuel Paradis
Maintainer: Julien Clavel <julien.clavel@hotmail.fr>

Diff between mvMORPH versions 1.0.6 dated 2015-08-24 and 1.0.7 dated 2016-06-18

 mvMORPH-1.0.6/mvMORPH/src/time_root_mvmorph.c           |only
 mvMORPH-1.0.6/mvMORPH/src/weight-matrix-simmap.c        |only
 mvMORPH-1.0.6/mvMORPH/vignettes/tutorial_mvMORPH.html   |only
 mvMORPH-1.0.7/mvMORPH/DESCRIPTION                       |   16 
 mvMORPH-1.0.7/mvMORPH/MD5                               |  106 +
 mvMORPH-1.0.7/mvMORPH/NAMESPACE                         |   21 
 mvMORPH-1.0.7/mvMORPH/R/estim.r                         |only
 mvMORPH-1.0.7/mvMORPH/R/fun.r                           |  679 ++++++++++-
 mvMORPH-1.0.7/mvMORPH/R/mvBM.r                          |  934 +++++++++++-----
 mvMORPH-1.0.7/mvMORPH/R/mvBMTS.r                        |only
 mvMORPH-1.0.7/mvMORPH/R/mvEB.r                          |  149 ++
 mvMORPH-1.0.7/mvMORPH/R/mvLLIK.r                        |    8 
 mvMORPH-1.0.7/mvMORPH/R/mvOU.r                          |  517 +++++---
 mvMORPH-1.0.7/mvMORPH/R/mvOUTS.r                        |only
 mvMORPH-1.0.7/mvMORPH/R/mvSHIFT.r                       |  341 ++++-
 mvMORPH-1.0.7/mvMORPH/R/mvSIM.r                         |  328 ++++-
 mvMORPH-1.0.7/mvMORPH/R/mvmorphPrecalc.r                |   15 
 mvMORPH-1.0.7/mvMORPH/R/testLRT.r                       |   75 +
 mvMORPH-1.0.7/mvMORPH/R/utils.r                         |only
 mvMORPH-1.0.7/mvMORPH/R/zzz.r                           |only
 mvMORPH-1.0.7/mvMORPH/README.md                         |   38 
 mvMORPH-1.0.7/mvMORPH/build/vignette.rds                |binary
 mvMORPH-1.0.7/mvMORPH/inst/CITATION                     |    6 
 mvMORPH-1.0.7/mvMORPH/inst/doc/How_to_use_mvMORPH.R     |only
 mvMORPH-1.0.7/mvMORPH/inst/doc/How_to_use_mvMORPH.Rmd   |only
 mvMORPH-1.0.7/mvMORPH/inst/doc/How_to_use_mvMORPH.pdf   |only
 mvMORPH-1.0.7/mvMORPH/inst/doc/tutorial_mvMORPH.R       |   52 
 mvMORPH-1.0.7/mvMORPH/inst/doc/tutorial_mvMORPH.Rmd     |   65 -
 mvMORPH-1.0.7/mvMORPH/inst/doc/tutorial_mvMORPH.pdf     |binary
 mvMORPH-1.0.7/mvMORPH/man/LRT.Rd                        |    2 
 mvMORPH-1.0.7/mvMORPH/man/aicw.Rd                       |only
 mvMORPH-1.0.7/mvMORPH/man/estim.Rd                      |only
 mvMORPH-1.0.7/mvMORPH/man/halflife.Rd                   |    8 
 mvMORPH-1.0.7/mvMORPH/man/mv.Precalc.Rd                 |   53 
 mvMORPH-1.0.7/mvMORPH/man/mvBM.Rd                       |  104 +
 mvMORPH-1.0.7/mvMORPH/man/mvEB.Rd                       |   36 
 mvMORPH-1.0.7/mvMORPH/man/mvLL.Rd                       |   45 
 mvMORPH-1.0.7/mvMORPH/man/mvMORPH-package.Rd            |   12 
 mvMORPH-1.0.7/mvMORPH/man/mvOU.Rd                       |  130 +-
 mvMORPH-1.0.7/mvMORPH/man/mvOUTS.Rd                     |only
 mvMORPH-1.0.7/mvMORPH/man/mvRWTS.Rd                     |only
 mvMORPH-1.0.7/mvMORPH/man/mvSHIFT.Rd                    |   85 -
 mvMORPH-1.0.7/mvMORPH/man/mvSIM.Rd                      |   67 -
 mvMORPH-1.0.7/mvMORPH/man/stationary.Rd                 |   12 
 mvMORPH-1.0.7/mvMORPH/src/chol_rpf_row.c                |   43 
 mvMORPH-1.0.7/mvMORPH/src/chol_rpf_univ.c               |   37 
 mvMORPH-1.0.7/mvMORPH/src/covar-matrix-simmap.c         |  148 ++
 mvMORPH-1.0.7/mvMORPH/src/covar.h                       |    4 
 mvMORPH-1.0.7/mvMORPH/src/functions_complex.h           |only
 mvMORPH-1.0.7/mvMORPH/src/givens.c                      |   12 
 mvMORPH-1.0.7/mvMORPH/src/mvmorph-covar-mat.c           |  142 ++
 mvMORPH-1.0.7/mvMORPH/src/mvmorph-covar-ou-sparse.c     |  141 ++
 mvMORPH-1.0.7/mvMORPH/src/mvmorph-covar-ou.c            |   56 
 mvMORPH-1.0.7/mvMORPH/src/mvmorph.h                     |    2 
 mvMORPH-1.0.7/mvMORPH/src/mvmorph_ou_mat_rpf.c          |  105 +
 mvMORPH-1.0.7/mvMORPH/src/pic_loglik_mvmorph.c          |  129 +-
 mvMORPH-1.0.7/mvMORPH/src/time_serie_expectation.c      |only
 mvMORPH-1.0.7/mvMORPH/src/utils.c                       |only
 mvMORPH-1.0.7/mvMORPH/src/weight-matrix-mvmorph.c       |   87 +
 mvMORPH-1.0.7/mvMORPH/tests/tests.r                     |  335 +++++
 mvMORPH-1.0.7/mvMORPH/vignettes/How_to_use_mvMORPH.Rmd  |only
 mvMORPH-1.0.7/mvMORPH/vignettes/How_to_use_mvMORPH.html |only
 mvMORPH-1.0.7/mvMORPH/vignettes/constraints.png         |only
 mvMORPH-1.0.7/mvMORPH/vignettes/root.png                |only
 mvMORPH-1.0.7/mvMORPH/vignettes/tutorial_mvMORPH.Rmd    |   65 -
 65 files changed, 4100 insertions(+), 1110 deletions(-)

More information about mvMORPH at CRAN
Permanent link

Package fdapace updated to version 0.2.0 with previous version 0.1.1 dated 2016-03-14

Title: Functional Data Analysis and Empirical Dynamics
Description: Provides implementation of various methods of Functional Data Analysis (FDA) and Empirical Dynamics. The core of this package is Functional Principal Component Analysis (FPCA), a key technique for functional data analysis, for sparsely or densely sampled random trajectories and time courses, via the Principal Analysis by Conditional Estimation (PACE) algorithm or numerical integration. PACE is useful for the analysis of data that have been generated by a sample of underlying (but usually not fully observed) random trajectories. It does not rely on pre-smoothing of trajectories, which is problematic if functional data are sparsely sampled. PACE provides options for functional regression and correlation, for Longitudinal Data Analysis, the analysis of stochastic processes from samples of realized trajectories, and for the analysis of underlying dynamics. The core computational algorithms are implemented using the 'Eigen' C++ library for numerical linear algebra and 'RcppEigen' "glue".
Author: Xiongtao Dai, Pantelis Z. Hadjipantelis, Hao Ji, Hans-Georg Mueller, Jane-Ling Wang
Maintainer: Pantelis Z. Hadjipantelis <pantelis@ucdavis.edu>

Diff between fdapace versions 0.1.1 dated 2016-03-14 and 0.2.0 dated 2016-06-18

 fdapace-0.1.1/fdapace/R/AdjustBW1.R                                  |only
 fdapace-0.1.1/fdapace/inst/doc/fdapaceVignette.Rnw                   |only
 fdapace-0.1.1/fdapace/inst/doc/fdapaceVignette.pdf                   |only
 fdapace-0.1.1/fdapace/man/HandleNumericsAndNAN.Rd                    |only
 fdapace-0.1.1/fdapace/vignettes/fdapaceVignette.Rnw                  |only
 fdapace-0.2.0/fdapace/DESCRIPTION                                    |   14 
 fdapace-0.2.0/fdapace/MD5                                            |  192 ++--
 fdapace-0.2.0/fdapace/NAMESPACE                                      |   59 +
 fdapace-0.2.0/fdapace/NEWS                                           |only
 fdapace-0.2.0/fdapace/R/BwNN.R                                       |only
 fdapace-0.2.0/fdapace/R/CheckAndCreateCOPoptions.R                   |only
 fdapace-0.2.0/fdapace/R/CheckData.R                                  |    4 
 fdapace-0.2.0/fdapace/R/CheckOptions.R                               |   14 
 fdapace-0.2.0/fdapace/R/CheckSVDOptions.R                            |only
 fdapace-0.2.0/fdapace/R/ConvertSupport.R                             |   27 
 fdapace-0.2.0/fdapace/R/CreateBWPlot.R                               |    4 
 fdapace-0.2.0/fdapace/R/CreateCovPlot.R                              |   19 
 fdapace-0.2.0/fdapace/R/CreateDesignPlot.R                           |   40 
 fdapace-0.2.0/fdapace/R/CreateDiagnosticsPlot.R                      |    6 
 fdapace-0.2.0/fdapace/R/CreateFuncBoxPlot.R                          |   10 
 fdapace-0.2.0/fdapace/R/CreateModeOfVarPlot.R                        |   41 
 fdapace-0.2.0/fdapace/R/CreateOutliersPlot.R                         |  378 ++++----
 fdapace-0.2.0/fdapace/R/CreatePathPlot.R                             |   36 
 fdapace-0.2.0/fdapace/R/CreateScreePlot.R                            |    6 
 fdapace-0.2.0/fdapace/R/FCReg.R                                      |  463 +++++++---
 fdapace-0.2.0/fdapace/R/FClust.R                                     |only
 fdapace-0.2.0/fdapace/R/FPCA.R                                       |   94 +-
 fdapace-0.2.0/fdapace/R/FPCAder.R                                    |    2 
 fdapace-0.2.0/fdapace/R/FSVD.R                                       |only
 fdapace-0.2.0/fdapace/R/FVPA.R                                       |   40 
 fdapace-0.2.0/fdapace/R/GCVLwls2DV2.R                                |  200 ++--
 fdapace-0.2.0/fdapace/R/GenerateFunctionalData.R                     |only
 fdapace-0.2.0/fdapace/R/GetBinnedDataset.R                           |    9 
 fdapace-0.2.0/fdapace/R/GetCEScores.R                                |    6 
 fdapace-0.2.0/fdapace/R/GetCovDense.R                                |    3 
 fdapace-0.2.0/fdapace/R/GetCrCovYX.R                                 |  180 ++-
 fdapace-0.2.0/fdapace/R/GetCrCovYZ.R                                 |   25 
 fdapace-0.2.0/fdapace/R/GetEigenAnalysisResults.R                    |    3 
 fdapace-0.2.0/fdapace/R/GetLogLik.R                                  |   39 
 fdapace-0.2.0/fdapace/R/GetMeanDense.R                               |    2 
 fdapace-0.2.0/fdapace/R/GetMinb.R                                    |   90 -
 fdapace-0.2.0/fdapace/R/GetNormalisedSample.R                        |   18 
 fdapace-0.2.0/fdapace/R/GetRawCov.R                                  |    2 
 fdapace-0.2.0/fdapace/R/GetRawCrCovFuncFunc.R                        |    4 
 fdapace-0.2.0/fdapace/R/GetSmoothedCovarSurface.R                    |   38 
 fdapace-0.2.0/fdapace/R/GetSmoothedMeanCurve.R                       |    5 
 fdapace-0.2.0/fdapace/R/HandleNumericsAndNAN.R                       |   34 
 fdapace-0.2.0/fdapace/R/IsRegular.R                                  |    2 
 fdapace-0.2.0/fdapace/R/Lwls2D.R                                     |   68 -
 fdapace-0.2.0/fdapace/R/Lwls2Dv1.R                                   |only
 fdapace-0.2.0/fdapace/R/MakeFPCAInputs.R                             |    4 
 fdapace-0.2.0/fdapace/R/MakeGPFunctionalData.R                       |only
 fdapace-0.2.0/fdapace/R/Minb.R                                       |   29 
 fdapace-0.2.0/fdapace/R/RcppExports.R                                |   12 
 fdapace-0.2.0/fdapace/R/SelectK.R                                    |   18 
 fdapace-0.2.0/fdapace/R/SetOptions.R                                 |   55 -
 fdapace-0.2.0/fdapace/R/SetSVDOptions.R                              |only
 fdapace-0.2.0/fdapace/R/Sparsify.R                                   |   10 
 fdapace-0.2.0/fdapace/R/TruncateObs.R                                |   10 
 fdapace-0.2.0/fdapace/R/Wiener.R                                     |    6 
 fdapace-0.2.0/fdapace/R/fitted.FPCA.R                                |    3 
 fdapace-0.2.0/fdapace/R/kCFC.R                                       |only
 fdapace-0.2.0/fdapace/R/medfly25.R                                   |    3 
 fdapace-0.2.0/fdapace/R/oldFCReg.R                                   |only
 fdapace-0.2.0/fdapace/R/pkgname.R                                    |   10 
 fdapace-0.2.0/fdapace/R/print.FPCA.R                                 |    4 
 fdapace-0.2.0/fdapace/R/print.FSVD.R                                 |only
 fdapace-0.2.0/fdapace/build/vignette.rds                             |binary
 fdapace-0.2.0/fdapace/inst/doc/fdapaceVignetteKnitr.R                |only
 fdapace-0.2.0/fdapace/inst/doc/fdapaceVignetteKnitr.Rnw              |only
 fdapace-0.2.0/fdapace/inst/doc/fdapaceVignetteKnitr.pdf              |only
 fdapace-0.2.0/fdapace/man/BwNN.Rd                                    |only
 fdapace-0.2.0/fdapace/man/ConvertSupport.Rd                          |only
 fdapace-0.2.0/fdapace/man/CreateBWPlot.Rd                            |    2 
 fdapace-0.2.0/fdapace/man/CreateCovPlot.Rd                           |    7 
 fdapace-0.2.0/fdapace/man/CreateDesignPlot.Rd                        |    6 
 fdapace-0.2.0/fdapace/man/CreateDiagnosticsPlot.Rd                   |    2 
 fdapace-0.2.0/fdapace/man/CreateFuncBoxPlot.Rd                       |    2 
 fdapace-0.2.0/fdapace/man/CreateModeOfVarPlot.Rd                     |    9 
 fdapace-0.2.0/fdapace/man/CreateOutliersPlot.Rd                      |   19 
 fdapace-0.2.0/fdapace/man/CreatePathPlot.Rd                          |   10 
 fdapace-0.2.0/fdapace/man/CreateScreePlot.Rd                         |    2 
 fdapace-0.2.0/fdapace/man/FCReg.Rd                                   |   66 +
 fdapace-0.2.0/fdapace/man/FClust.Rd                                  |only
 fdapace-0.2.0/fdapace/man/FPCA.Rd                                    |   24 
 fdapace-0.2.0/fdapace/man/FPCAder.Rd                                 |    2 
 fdapace-0.2.0/fdapace/man/FSVD.Rd                                    |only
 fdapace-0.2.0/fdapace/man/FVPA.Rd                                    |   17 
 fdapace-0.2.0/fdapace/man/GetCrCovYX.Rd                              |   11 
 fdapace-0.2.0/fdapace/man/GetCrCovYZ.Rd                              |   12 
 fdapace-0.2.0/fdapace/man/GetNormalisedSample.Rd                     |    7 
 fdapace-0.2.0/fdapace/man/Lwls2D.Rd                                  |    5 
 fdapace-0.2.0/fdapace/man/Lwls2Dv1.Rd                                |only
 fdapace-0.2.0/fdapace/man/MakeFPCAInputs.Rd                          |    4 
 fdapace-0.2.0/fdapace/man/MakeGPFunctionalData.Rd                    |only
 fdapace-0.2.0/fdapace/man/SelectK.Rd                                 |    8 
 fdapace-0.2.0/fdapace/man/Sparsify.Rd                                |    4 
 fdapace-0.2.0/fdapace/man/fitted.FPCA.Rd                             |    3 
 fdapace-0.2.0/fdapace/man/kCFC.Rd                                    |only
 fdapace-0.2.0/fdapace/man/oldFCReg.Rd                                |only
 fdapace-0.2.0/fdapace/man/print.FPCA.Rd                              |    3 
 fdapace-0.2.0/fdapace/man/print.FSVD.Rd                              |only
 fdapace-0.2.0/fdapace/src/CPPlwls1d.cpp                              |    2 
 fdapace-0.2.0/fdapace/src/GetIndCEScoresCPP.cpp                      |   10 
 fdapace-0.2.0/fdapace/src/GetIndCEScoresCPPnewInd.cpp                |   40 
 fdapace-0.2.0/fdapace/src/RcppExports.cpp                            |   49 +
 fdapace-0.2.0/fdapace/src/Rmullwlsk.cpp                              |    9 
 fdapace-0.2.0/fdapace/src/RmullwlskCC.cpp                            |    7 
 fdapace-0.2.0/fdapace/src/RmullwlskCCsort2.cpp                       |only
 fdapace-0.2.0/fdapace/src/RmullwlskUniversal.cpp                     |only
 fdapace-0.2.0/fdapace/src/cumtrapzRcpp.cpp                           |only
 fdapace-0.2.0/fdapace/vignettes/Sweavel.sty                          |only
 fdapace-0.2.0/fdapace/vignettes/fdapaceVignetteKnitr-concordance.tex |only
 fdapace-0.2.0/fdapace/vignettes/fdapaceVignetteKnitr.Rnw             |only
 fdapace-0.2.0/fdapace/vignettes/roxygen.bib                          |   11 
 115 files changed, 1642 insertions(+), 1052 deletions(-)

More information about fdapace at CRAN
Permanent link

Package comf updated to version 0.1.4 with previous version 0.1.3 dated 2016-06-17

Title: Functions for Thermal Comfort Research
Description: Functions to calculate various common and less common thermal comfort indices, convert physical variables, and evaluate the performance of thermal comfort indices.
Author: Marcel Schweiker [aut, cre] and Sophia Mueller [aut] and Michael Kleber [ctr] and Boris Kingma [ctr] and Masanori Shukuya [ctr]
Maintainer: Marcel Schweiker <marcel.schweiker@kit.edu>

Diff between comf versions 0.1.3 dated 2016-06-17 and 0.1.4 dated 2016-06-18

 DESCRIPTION         |    6 +++---
 MD5                 |   12 ++++++------
 NEWS                |    7 +++++++
 R/ComfortIndices.r  |    6 ++++--
 R/fct2Node.r        |   13 +++++++++----
 man/calc2Node.Rd    |    8 ++++++++
 man/comf-package.Rd |    4 ++--
 7 files changed, 39 insertions(+), 17 deletions(-)

More information about comf at CRAN
Permanent link


Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.