Fri, 22 Jul 2016

Package cobalt updated to version 1.1.0 with previous version 1.0.0 dated 2016-07-15

Title: Covariate Balance Tables and Plots
Description: Generate balance tables and plots for covariates of groups preprocessed through matching, weighting or subclassification, for example, using propensity scores. Includes integration with 'MatchIt', 'twang', 'Matching', and 'CBPS' for assessing balance on the output of their preprocessing functions. Users can also specify their data not generated through the above packages.
Author: Noah Greifer [aut, cre]
Maintainer: Noah Greifer <noah@unc.edu>

Diff between cobalt versions 1.0.0 dated 2016-07-15 and 1.1.0 dated 2016-07-22

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Package track updated to version 1.1.9 with previous version 1.1.8 dated 2015-04-01

Title: Store Objects on Disk Automatically
Description: Automatically stores objects in files on disk so that files are rewritten when objects are changed, and so that objects are accessible but do not occupy memory until they are accessed. Keeps track of times when objects are created and modified, and caches some basic characteristics of objects to allow for fast summaries of objects. Also provides a command history mechanism that saves the last command to a history file after each command completes.
Author: Tony Plate <tplate@acm.org>
Maintainer: Tony Plate <tplate@acm.org>

Diff between track versions 1.1.8 dated 2015-04-01 and 1.1.9 dated 2016-07-22

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Package TimeWarp updated to version 1.0.15 with previous version 1.0.12 dated 2015-04-01

Title: Date Calculations and Manipulation
Description: Date sequence, relative date calculations, and date manipulation with business days and holidays. Works with Date and POSIXt classes.
Author: Tony Plate, Jeffrey Horner, Lars Hansen
Maintainer: Tony Plate <tplate@acm.org>

Diff between TimeWarp versions 1.0.12 dated 2015-04-01 and 1.0.15 dated 2016-07-22

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Package pullword updated to version 0.2 with previous version 0.1 dated 2015-02-20

Title: R Interface to Pullword Service
Description: R Interface to Pullword Service for natural language processing in Chinese. It enables users to extract valuable words from text by deep learning models. For more details please visit the official site (in Chinese) http://pullword.com/.
Author: Tong He <hetong007@gmail.com>
Maintainer: Tong He <hetong007@gmail.com>

Diff between pullword versions 0.1 dated 2015-02-20 and 0.2 dated 2016-07-22

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Package Holidays updated to version 1.0-7 with previous version 1.0-6 dated 2015-03-13

Title: Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
Description: Contains trading holiday and half-day data that is automatically registered when loaded.
Author: Jeffery Horner, Lars Hansen, Tony Plate
Maintainer: Tony Plate <tplate@acm.org>

Diff between Holidays versions 1.0-6 dated 2015-03-13 and 1.0-7 dated 2016-07-22

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New package EmiStatR with initial version 1.2.0
Package: EmiStatR
Type: Package
Title: Estimation of Wastewater Emissions in Combined Sewer Systems
Version: 1.2.0
Date: 2016-07-22
Author: J.A. Torres-Matallana [aut, cre] K. Klepiszewski [aut, cre] U. Leopold [ctb] G.B.M. Heuvelink [ctb]
Maintainer: J.A. Torres-Matallana <arturo.torres@list.lu>
Description: The EmiStatR provides a fast and parallelised calculator to estimate combined wastewater emissions. It supports the planning and design of urban drainage systems, without the requirement of extensive simulation tools. The EmiStatR package implements modular R methods. This enables to add new functionalities through the R framework. Furthermore, EmiStatR was implemented with an interactive user interface with sliders and input data exploration.
License: GPL (>= 3)
Depends: methods, foreach, parallel, doParallel, lattice, shiny
NeedsCompilation: yes
Packaged: 2016-07-22 18:50:12 UTC; torres
Repository: CRAN
Date/Publication: 2016-07-22 23:52:03

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Package scriptests updated to version 1.0-16 with previous version 1.0-15 dated 2015-03-14

Title: Transcript-Based Unit Tests that are Easy to Create and Maintain
Description: Support for using .Rt (transcript) tests in the tests directory of a package. Provides more convenience and features than the standard .R/.Rout.save tests. Tests can be run under R CMD check and also interactively. Provides source.pkg() for quickly loading code, DLLs, and data from a package for use in an edit/compile/test development cycle.
Author: Tony Plate
Maintainer: Tony Plate <tplate@acm.org>

Diff between scriptests versions 1.0-15 dated 2015-03-14 and 1.0-16 dated 2016-07-22

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Package IntegratedMRF updated to version 1.1.4 with previous version 1.0 dated 2016-04-15

Title: Integrated Prediction using Univariate and Multivariate Random Forests
Description: An implementation of a framework for drug sensitivity prediction from various genetic characterizations using ensemble approaches. Random Forests or Multivariate Random Forest predictive models can be generated from each genetic characterization that are then combined using a Least Square Regression approach. It also provides options for the use of different error estimation approaches of Leave-one-out, Bootstrap, N-fold cross validation and 0.632+Bootstrap along with generation of prediction confidence interval using Jackknife-after-Bootstrap approach.
Author: Raziur Rahman, Ranadip Pal
Maintainer: Raziur Rahman <razeeebuet@gmail.com>

Diff between IntegratedMRF versions 1.0 dated 2016-04-15 and 1.1.4 dated 2016-07-22

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Package udunits2 updated to version 0.11 with previous version 0.8.1 dated 2015-09-22

Title: Udunits-2 Bindings for R
Description: Provides simple bindings to Unidata's udunits library.
Author: James Hiebert <hiebert@uvic.ca>
Maintainer: James Hiebert <hiebert@uvic.ca>

Diff between udunits2 versions 0.8.1 dated 2015-09-22 and 0.11 dated 2016-07-22

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Package SocialMediaLab updated to version 0.23.0 with previous version 0.22.0 dated 2016-04-10

Title: Tools for Collecting Social Media Data and Generating Networks for Analysis
Description: A suite of tools for collecting and constructing networks from social media data. Provides easy-to-use functions for collecting data across popular platforms (Instagram, Facebook, Twitter, and YouTube) and generating different types of networks for analysis.
Author: Timothy Graham & Robert Ackland with contribution from Chung-hong Chan
Maintainer: Timothy Graham <timothy.graham3@uq.net.au>

Diff between SocialMediaLab versions 0.22.0 dated 2016-04-10 and 0.23.0 dated 2016-07-22

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Package rFerns updated to version 2.0.2 with previous version 2.0.1 dated 2016-05-20

Title: Random Ferns Classifier
Description: An R implementation of the random ferns classifier by Ozuysal et al., modified for generic and multi-label classification and featuring OOB error approximation and importance measure.
Author: Miron B. Kursa
Maintainer: Miron B. Kursa <M.Kursa@icm.edu.pl>

Diff between rFerns versions 2.0.1 dated 2016-05-20 and 2.0.2 dated 2016-07-22

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New package sizeMat with initial version 0.1.0
Package: sizeMat
Type: Package
Title: Estimate Size at Sexual Maturity
Version: 0.1.0
Date: 2016-07-19
Authors@R: c(person("Josymar", "Torrejon-Magallanes", email = "ejosymart@gmail.com", role = c("cre", "aut")), person("Wencheng", "Lau-Medrano", role = "ctb"))
Maintainer: Josymar Torrejon-Magallanes <ejosymart@gmail.com>
Description: Contains functions to estimate morphometric and gonadal size at sexual maturity for organisms, usually fish and invertebrates. It includes methods for classification based on relative growth (using principal components analysis, hierarchical clustering, discriminant analysis), logistic regression (Frequentist or Bayes), parameters estimation and some basic plots.
Depends: R (>= 2.15)
Imports: MCMCpack, matrixStats, MASS, grDevices, graphics, stats, utils
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
License: GPL-2
LazyData: TRUE
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-07-22 16:16:10 UTC; Josymar
Author: Josymar Torrejon-Magallanes [cre, aut], Wencheng Lau-Medrano [ctb]
Repository: CRAN
Date/Publication: 2016-07-22 19:36:07

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New package rbgm with initial version 0.0.4
Package: rbgm
Type: Package
Title: Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model
Version: 0.0.4
Authors@R: c( person("Michael D.", "Sumner", , "mdsumner@gmail.com", c("aut", "cre")) )
Depends: R (>= 3.2.2), raster, sp
Imports: dplyr, geosphere, tibble (>= 1.1)
Suggests: bgmfiles, covr, graticule, knitr, rgdal, rmarkdown, roxygen2, scales, testthat
Description: Facilities for working with Atlantis box-geometry model (BGM) files. Atlantis is a deterministic, biogeochemical, whole-of-ecosystem model. Functions are provided to read from BGM files directly, preserving their internal topology, as well as helper functions to generate 'Spatial' objects. This functionality aims to simplify the creation and modification of box and geometry as well as the ability to integrate with other data sources.
NeedsCompilation: no
ByteCompile: yes
License: GPL-3
RoxygenNote: 5.0.1
URL: https://github.com/AustralianAntarcticDivision/rbgm/, http://atlantis.cmar.csiro.au/
BugReports: https://github.com/AustralianAntarcticDivision/rbgm/issues/
VignetteBuilder: knitr
Packaged: 2016-07-22 06:31:34 UTC; mdsumner
Author: Michael D. Sumner [aut, cre]
Maintainer: Michael D. Sumner <mdsumner@gmail.com>
Repository: CRAN
Date/Publication: 2016-07-22 19:29:23

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Package manifestoR updated to version 1.2.3 with previous version 1.2.2 dated 2016-06-28

Title: Access and Process Data and Documents of the Manifesto Project
Description: Provides access to coded election programmes from the Manifesto Corpus and to the Manifesto Project's Main Dataset and routines to analyse this data. The Manifesto Project (https://manifesto-project.wzb.eu) collects and analyses election programmes across time and space to measure the political preferences of parties. The Manifesto Corpus contains the collected and annotated election programmes in the Corpus format of the package 'tm' to enable easy use of text processing and text mining functionality. Specific functions for scaling of coded political texts are included.
Author: Jirka Lewandowski [aut, cre], Nicolas Merz [aut], Sven Regel [ctb], Pola Lehmann [ctb]
Maintainer: Jirka Lewandowski <jirka.lewandowski@wzb.eu>

Diff between manifestoR versions 1.2.2 dated 2016-06-28 and 1.2.3 dated 2016-07-22

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New package MFPCA with initial version 1.0
Package: MFPCA
Type: Package
Title: Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains
Version: 1.0
Date: 2016-07-18
Authors@R: person("Clara", "Happ", email = "clara.happ@stat.uni-muenchen.de", role = c("aut", "cre"))
Author: Clara Happ [aut, cre]
Maintainer: Clara Happ <clara.happ@stat.uni-muenchen.de>
Description: Calculate a multivariate functional principal component analysis for data observed on different dimensional domains. The estimation algorithm relies on univariate basis expansions for each element of the multivariate functional data. Multivariate and univariate functional data objects are represented by S4 classes for this type of data implemented in the package 'funData'.
License: GPL-2
Imports: abind, foreach, irlba, Matrix, methods, mgcv, plyr, stats
Depends: R (>= 3.1.0), funData
Suggests: testthat
NeedsCompilation: yes
SystemRequirements: libfftw3 (>= 3.3.4)
RoxygenNote: 5.0.1
Packaged: 2016-07-22 16:02:31 UTC; happ
Repository: CRAN
Date/Publication: 2016-07-22 19:29:25

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Package iemiscdata updated to version 0.6.1 with previous version 0.6.0 dated 2016-07-14

Title: Irucka Embry's Miscellaneous Data Collection
Description: Miscellaneous data sets [Engineering Economics, Environmental/ Water Resources Engineering, US Presidential Elections].
Author: Irucka Embry [aut, cre]
Maintainer: Irucka Embry <iembry@ecoccs.com>

Diff between iemiscdata versions 0.6.0 dated 2016-07-14 and 0.6.1 dated 2016-07-22

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Package iemisc updated to version 0.9.2 with previous version 0.9.1 dated 2016-07-14

Title: Irucka Embry's Miscellaneous Functions
Description: A collection of Irucka Embry's miscellaneous functions (Engineering Economics, Environmental/Water Resources Engineering, Geometry, Statistics, GNU Octave length functions, etc.).
Author: Irucka Embry [aut, cre], Felix Andrews [aut, ctb] (zoo), Hans Werner Borchers [aut, ctb] (pracma), Samit Basu [aut, ctb] (FreeMat)
Maintainer: Irucka Embry <iembry@ecoccs.com>

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Package humidity updated to version 0.1.1 with previous version 0.1.0 dated 2016-07-22

Title: An R Package for Calculating Water Vapor Measures from Temperature and Relative Humidity
Description: Vapor pressure, absolute humidity, specific humidity, and mixing ratio are commonly used water vapor measures in meteorology. This R package provides functions for calculating saturation vapor pressure (hPa), partial water vapor pressure (Pa), absolute humidity (kg/m^3), specific humidity (kg/kg), and mixing ratio (kg/kg) from temperature (K) and relative humidity (%).
Author: Jun Cai [aut, cre]
Maintainer: Jun Cai <cai-j12@mails.tsinghua.edu.cn>

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Package GSIF updated to version 0.5-3 with previous version 0.5-2 dated 2016-06-25

Title: Global Soil Information Facilities
Description: Global Soil Information Facilities - tools (standards and functions) and sample datasets for global soil mapping.
Author: Tomislav Hengl [cre, aut], Bas Kempen [ctb], Gerard Heuvelink [ctb], Brendan Malone [ctb]
Maintainer: Tomislav Hengl <tom.hengl@isric.org>

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Package ggvis updated to version 0.4.3 with previous version 0.4.2 dated 2015-06-05

Title: Interactive Grammar of Graphics
Description: An implementation of an interactive grammar of graphics, taking the best parts of 'ggplot2', combining them with the reactive framework of 'shiny' and drawing web graphics using 'vega'.
Author: Winston Chang [aut, cre], Hadley Wickham [aut], RStudio [cph], jQuery Foundation [cph] (jQuery library and jQuery UI library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/www/lib/jquery/AUTHORS.txt), jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/www/lib/jquery-ui/AUTHORS.txt), Mike Bostock [ctb, cph] (D3 library), D3 contributors [ctb] (D3 library; authors listed at https://github.com/mbostock/d3/graphs/contributors), Trifacta Inc. [cph] (Vega library), Vega contributors [ctb] (Vega library; authors listed at https://github.com/trifacta/vega/graphs/contributors), Sebastián Décima [ctb, cph] (javascript-detect-element-resize library)
Maintainer: Winston Chang <winston@rstudio.com>

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 ggvis-0.4.3/ggvis/DESCRIPTION                                                             |   20 
 ggvis-0.4.3/ggvis/MD5                                                                     |  302 ++++------
 ggvis-0.4.3/ggvis/NAMESPACE                                                               |    2 
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 ggvis-0.4.3/ggvis/R/compute_bin.R                                                         |    6 
 ggvis-0.4.3/ggvis/R/compute_boxplot.R                                                     |    2 
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 ggvis-0.4.3/ggvis/R/compute_stack.R                                                       |    2 
 ggvis-0.4.3/ggvis/R/df_to_d3json.R                                                        |    2 
 ggvis-0.4.3/ggvis/R/dplyr.R                                                               |    2 
 ggvis-0.4.3/ggvis/R/flatten.R                                                             |    4 
 ggvis-0.4.3/ggvis/R/ggvis_html.R                                                          |    4 
 ggvis-0.4.3/ggvis/R/inputs.R                                                              |    2 
 ggvis-0.4.3/ggvis/R/props.R                                                               |    2 
 ggvis-0.4.3/ggvis/R/scale.R                                                               |    2 
 ggvis-0.4.3/ggvis/R/utils.R                                                               |    4 
 ggvis-0.4.3/ggvis/R/utils_data.R                                                          |    4 
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 ggvis-0.4.3/ggvis/man/add_axis.Rd                                                         |    4 
 ggvis-0.4.3/ggvis/man/add_data.Rd                                                         |    2 
 ggvis-0.4.3/ggvis/man/add_guide_axis.Rd                                                   |    2 
 ggvis-0.4.3/ggvis/man/add_guide_legend.Rd                                                 |    2 
 ggvis-0.4.3/ggvis/man/add_legend.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/add_props.Rd                                                        |    2 
 ggvis-0.4.3/ggvis/man/add_relative_scales.Rd                                              |    2 
 ggvis-0.4.3/ggvis/man/add_scale.Rd                                                        |    2 
 ggvis-0.4.3/ggvis/man/add_tooltip.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/as.vega.Rd                                                          |    2 
 ggvis-0.4.3/ggvis/man/auto_group.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/axis_props.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/band.Rd                                                             |    4 
 ggvis-0.4.3/ggvis/man/bin_vector.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/cocaine.Rd                                                          |    2 
 ggvis-0.4.3/ggvis/man/compute_align.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/compute_bin.Rd                                                      |    4 
 ggvis-0.4.3/ggvis/man/compute_boxplot.Rd                                                  |    2 
 ggvis-0.4.3/ggvis/man/compute_count.Rd                                                    |    4 
 ggvis-0.4.3/ggvis/man/compute_density.Rd                                                  |    4 
 ggvis-0.4.3/ggvis/man/compute_model_prediction.Rd                                         |    2 
 ggvis-0.4.3/ggvis/man/compute_stack.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/compute_tabulate.Rd                                                 |    4 
 ggvis-0.4.3/ggvis/man/create_broker.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/create_input.Rd                                                     |    2 
 ggvis-0.4.3/ggvis/man/default_options.Rd                                                  |    2 
 ggvis-0.4.3/ggvis/man/dplyr-ggvis.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/explain.Rd                                                          |    2 
 ggvis-0.4.3/ggvis/man/explain.ggvis.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/export_png.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/fullseq.Rd                                                          |    2 
 ggvis-0.4.3/ggvis/man/get_data.Rd                                                         |    3 
 ggvis-0.4.3/ggvis/man/ggvis.Rd                                                            |    2 
 ggvis-0.4.3/ggvis/man/ggvisControlOutput.Rd                                               |    2 
 ggvis-0.4.3/ggvis/man/ggvisOutputElements.Rd                                              |    2 
 ggvis-0.4.3/ggvis/man/ggvis_message.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/ggvis_scale.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/group_by.Rd                                                         |    2 
 ggvis-0.4.3/ggvis/man/handle_brush.Rd                                                     |    2 
 ggvis-0.4.3/ggvis/man/handle_click.Rd                                                     |    4 
 ggvis-0.4.3/ggvis/man/handle_resize.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/input_checkbox.Rd                                                   |    9 
 ggvis-0.4.3/ggvis/man/input_select.Rd                                                     |    7 
 ggvis-0.4.3/ggvis/man/input_slider.Rd                                                     |   20 
 ggvis-0.4.3/ggvis/man/input_text.Rd                                                       |    8 
 ggvis-0.4.3/ggvis/man/is.axis_props.Rd                                                    |    2 
 ggvis-0.4.3/ggvis/man/is.broker.Rd                                                        |    2 
 ggvis-0.4.3/ggvis/man/is.dynamic.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/is.ggvis.Rd                                                         |    2 
 ggvis-0.4.3/ggvis/man/is.legend_props.Rd                                                  |    2 
 ggvis-0.4.3/ggvis/man/is.scaled_value.Rd                                                  |    2 
 ggvis-0.4.3/ggvis/man/knit_print.ggvis.Rd                                                 |    2 
 ggvis-0.4.3/ggvis/man/layer_bars.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/layer_boxplots.Rd                                                   |    2 
 ggvis-0.4.3/ggvis/man/layer_densities.Rd                                                  |    2 
 ggvis-0.4.3/ggvis/man/layer_f.Rd                                                          |    2 
 ggvis-0.4.3/ggvis/man/layer_guess.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/layer_histograms.Rd                                                 |    2 
 ggvis-0.4.3/ggvis/man/layer_lines.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/layer_model_predictions.Rd                                          |    2 
 ggvis-0.4.3/ggvis/man/left_right.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/legend_props.Rd                                                     |    6 
 ggvis-0.4.3/ggvis/man/linked_brush.Rd                                                     |    2 
 ggvis-0.4.3/ggvis/man/mark.Rd                                                             |    2 
 ggvis-0.4.3/ggvis/man/marks.Rd                                                            |    4 
 ggvis-0.4.3/ggvis/man/new_prop.Rd                                                         |    2 
 ggvis-0.4.3/ggvis/man/padding.Rd                                                          |    4 
 ggvis-0.4.3/ggvis/man/pipe.Rd                                                             |    4 
 ggvis-0.4.3/ggvis/man/print.ggvis.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/prop.Rd                                                             |    5 
 ggvis-0.4.3/ggvis/man/prop_domain.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/propname_to_scale.Rd                                                |    2 
 ggvis-0.4.3/ggvis/man/props.Rd                                                            |    2 
 ggvis-0.4.3/ggvis/man/resolution.Rd                                                       |    2 
 ggvis-0.4.3/ggvis/man/save_spec.Rd                                                        |    2 
 ggvis-0.4.3/ggvis/man/scale_datetime.Rd                                                   |    7 
 ggvis-0.4.3/ggvis/man/scale_numeric.Rd                                                    |    5 
 ggvis-0.4.3/ggvis/man/scale_ordinal.Rd                                                    |    4 
 ggvis-0.4.3/ggvis/man/scaled_value.Rd                                                     |    2 
 ggvis-0.4.3/ggvis/man/scales.Rd                                                           |    2 
 ggvis-0.4.3/ggvis/man/scaletype_to_vega_scaletype.Rd                                      |    2 
 ggvis-0.4.3/ggvis/man/set_options.Rd                                                      |    7 
 ggvis-0.4.3/ggvis/man/set_scale_label.Rd                                                  |    2 
 ggvis-0.4.3/ggvis/man/shiny-ggvis.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/show_spec.Rd                                                        |    2 
 ggvis-0.4.3/ggvis/man/show_tooltip.Rd                                                     |    2 
 ggvis-0.4.3/ggvis/man/sidebarBottomPage.Rd                                                |    2 
 ggvis-0.4.3/ggvis/man/singular.Rd                                                         |    2 
 ggvis-0.4.3/ggvis/man/subvis.Rd                                                           |    2 
 ggvis-0.4.3/ggvis/man/vector_type.Rd                                                      |    2 
 ggvis-0.4.3/ggvis/man/vega_data_parser.Rd                                                 |    2 
 ggvis-0.4.3/ggvis/man/waggle.Rd                                                           |    2 
 ggvis-0.4.3/ggvis/man/zero_range.Rd                                                       |    3 
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New package CorrectOverloadedPeaks with initial version 1.2.13
Package: CorrectOverloadedPeaks
Type: Package
Title: Correct Overloaded Peaks from GC-APCI-MS Data
Version: 1.2.13
Date: 2016-07-22
Authors@R: person("Jan", "Lisec", role = c("aut", "cre"), email = "jan.lisec@charite.de")
Author: Jan Lisec [aut, cre]
Description: Analyzes and modifies metabolomics raw data (generated using GC-APCI-MS, Gas Chromatography-Atmospheric Pressure Chemical Ionization-Mass Spectrometry) to correct overloaded signals, i.e. ion intensities exceeding detector saturation leading to a cut-off peak. Data in xcmsRaw format are accepted as input and mzXML files can be processed alternatively. Overloaded signals are detected automatically and modified using an Gaussian or Isotopic-Ratio approach, QC plots are generated and corrected data are stored within the original xcmsRaw or mzXML respectively to allow further processing.
License: GPL-3
URL: http://dx.doi.org/10.1021/acs.analchem.6b02515
Depends: R(>= 2.10.0)
Imports: xcms, XML, digest, caTools
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-07-22 07:20:23 UTC; lisecj
Maintainer: Jan Lisec <jan.lisec@charite.de>
Repository: CRAN
Date/Publication: 2016-07-22 19:32:08

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Package elpatron (with last version 0.0.4) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2016-07-22 0.0.4
2016-07-21 0.0.3
2016-06-05 0.0.2
2016-05-27 0.0.1

Permanent link
Package Corbi updated to version 0.4-0 with previous version 0.3-5 dated 2016-06-28

Title: Collection of Rudimentary Bioinformatics Tools
Description: Provides a bundle of basic and fundamental bioinformatics tools, such as network querying and alignment, subnetwork extraction and search, network biomarker identification.
Author: Ling-Yun Wu [aut, cre], Qiang Huang [aut], Duanchen Sun [aut]
Maintainer: Ling-Yun Wu <wulingyun@gmail.com>

Diff between Corbi versions 0.3-5 dated 2016-06-28 and 0.4-0 dated 2016-07-22

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Package OneR updated to version 1.3 with previous version 1.2 dated 2016-06-20

Title: One Rule Machine Learning Classification Algorithm with Enhancements
Description: Implements the One Rule (OneR) Machine Learning classification algorithm with enhancements for sophisticated handling of numeric data and missing values together with extensive diagnostic functions. It is useful as a baseline for machine learning models and the rules are often helpful heuristics.
Author: Holger von Jouanne-Diedrich
Maintainer: Holger von Jouanne-Diedrich <holger.jouanne-diedrich@h-ab.de>

Diff between OneR versions 1.2 dated 2016-06-20 and 1.3 dated 2016-07-22

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Package StratifiedBalancing updated to version 0.2.0 with previous version 0.1.0 dated 2016-07-08

Title: Performs Stratified Covariate Balancing for Data with Discrete and Continuous Outcome Variables
Description: Stratified covariate balancing through naturally occurring strata to adjust for confounding and interaction effects. Contains 4 primary functions which perform stratification, sensitivity analysis and return adjusted odds along with naturally occurring strata.
Author: Farrokh Alemi Phd , Amr ElRafey
Maintainer: Amr ElRafey <ae2504@columbia.edu>

Diff between StratifiedBalancing versions 0.1.0 dated 2016-07-08 and 0.2.0 dated 2016-07-22

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 man/gerom.Rd        |    3 
 man/makeit.Rd       |    3 
 man/oddscont.Rd     |    3 
 man/oddsdisc.Rd     |    3 
 man/senscont.Rd     |only
 man/sensdisc.Rd     |only
 man/stratacont.Rd   |   40 +++----
 man/stratadisc.Rd   |   37 +++---
 man/stratifycont.Rd |    3 
 man/stratifydisc.Rd |    3 
 man/summarycont.Rd  |    3 
 man/summarydisc.Rd  |    3 
 man/un1.Rd          |    3 
 man/un3.Rd          |    3 
 man/weightcont.Rd   |    3 
 man/weightdisc.Rd   |    2 
 22 files changed, 336 insertions(+), 111 deletions(-)

More information about StratifiedBalancing at CRAN
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New package humidity with initial version 0.1.0
Package: humidity
Type: Package
Title: An R Package for Calculating Water Vapor Measures from Temperature and Relative Humidity
Version: 0.1.0
Author: Jun Cai <cai-j12@mails.tsinghua.edu.cn>
Maintainer: Jun Cai <cai-j12@mails.tsinghua.edu.cn>
Description: Vapor pressure, absolute humidity, specific humidity, and mixing ratio are commonly used water vapor measures in meteorology. This R package provides functions for calculating saturation vapor pressure (hPa), partial water vapor pressure (Pa), absolute humidity (kg/m^3), specific humidity (kg/kg), and mixing ratio (kg/kg) from temperature (K) and relative humidity (%).
Depends: R (>= 2.10)
License: GPL-3
URL: https://github.com/caijun/humidity
BugReports: https://github.com/caijun/humidity/issues
Encoding: UTF-8
LazyData: true
RoxygenNote: 5.0.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2016-07-22 06:01:33 UTC; tonytsai
Repository: CRAN
Date/Publication: 2016-07-22 14:51:43

More information about humidity at CRAN
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Package DIFboost updated to version 0.2 with previous version 0.1 dated 2015-08-19

Title: Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
Description: Performs detection of Differential Item Functioning using the method DIFboost as proposed in Schauberger and Tutz (2015): Detection of Differential item functioning in Rasch models by boosting techniques, British Journal of Mathematical and Statistical Psychology.
Author: Gunther Schauberger
Maintainer: Gunther Schauberger <gunther@stat.uni-muenchen.de>

Diff between DIFboost versions 0.1 dated 2015-08-19 and 0.2 dated 2016-07-22

 DESCRIPTION             |    8 ++++----
 MD5                     |   14 +++++++-------
 R/DIFboost.R            |    5 +++--
 data/simul.data.rda     |binary
 man/DIFboost-package.Rd |    2 +-
 man/DIFboost.Rd         |    2 +-
 man/print.DIFboost.Rd   |    2 +-
 man/simul.data.Rd       |    2 +-
 8 files changed, 18 insertions(+), 17 deletions(-)

More information about DIFboost at CRAN
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