Title: Data Transformation and Labelled Data Utility Functions
Description: Collection of miscellaneous utility functions (especially intended
for people coming from other statistical software packages like 'SPSS', and/
or who are new to R), supporting following common tasks when working with
data : 1) Reading and writing data between R and other statistical software
packages like 'SPSS', 'SAS' or 'Stata' and working with labelled data; this
includes easy ways to get and set label attributes, to convert labelled
vectors into factors (and vice versa), or to deal with multiple declared
missing values etc. 2) Data transformation tasks like recoding,
dichotomizing or grouping variables, setting and replacing missing values.
The data transformation functions also support labelled data.
Author: Daniel Lüdecke <d.luedecke@uke.de>
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between sjmisc versions 2.2.1 dated 2017-01-09 and 2.3.0 dated 2017-02-07
sjmisc-2.2.1/sjmisc/man/var_labels.Rd |only sjmisc-2.3.0/sjmisc/DESCRIPTION | 13 sjmisc-2.3.0/sjmisc/MD5 | 220 +++---- sjmisc-2.3.0/sjmisc/NAMESPACE | 67 -- sjmisc-2.3.0/sjmisc/NEWS | 22 sjmisc-2.3.0/sjmisc/NEWS.md | 26 sjmisc-2.3.0/sjmisc/R/add_columns.R |only sjmisc-2.3.0/sjmisc/R/add_labels.R | 382 ++++++------ sjmisc-2.3.0/sjmisc/R/as_labelled.R | 258 ++++---- sjmisc-2.3.0/sjmisc/R/copy_labels.R | 144 ++-- sjmisc-2.3.0/sjmisc/R/count_na.R | 173 +++-- sjmisc-2.3.0/sjmisc/R/descr.R | 9 sjmisc-2.3.0/sjmisc/R/dicho.R | 260 ++++---- sjmisc-2.3.0/sjmisc/R/drop_labels.R | 68 +- sjmisc-2.3.0/sjmisc/R/fill_labels.R | 37 - sjmisc-2.3.0/sjmisc/R/frq.R | 535 +++++++++-------- sjmisc-2.3.0/sjmisc/R/get_labels.R | 7 sjmisc-2.3.0/sjmisc/R/get_na.R | 4 sjmisc-2.3.0/sjmisc/R/get_values.R | 10 sjmisc-2.3.0/sjmisc/R/group_str.R | 342 +++++------ sjmisc-2.3.0/sjmisc/R/group_var.R | 469 ++++++++------- sjmisc-2.3.0/sjmisc/R/helpfunctions.R | 35 - sjmisc-2.3.0/sjmisc/R/merge_df.R | 298 +++++---- sjmisc-2.3.0/sjmisc/R/read_write.R | 605 +++++++++---------- sjmisc-2.3.0/sjmisc/R/rec.R | 811 +++++++++++++------------- sjmisc-2.3.0/sjmisc/R/rec_pattern.R | 15 sjmisc-2.3.0/sjmisc/R/recode_to.R | 90 +- sjmisc-2.3.0/sjmisc/R/ref_lvl.R | 204 +++--- sjmisc-2.3.0/sjmisc/R/remove_all_labels.R | 114 +-- sjmisc-2.3.0/sjmisc/R/remove_labels.R | 169 ++--- sjmisc-2.3.0/sjmisc/R/replace_na.R | 92 +-- sjmisc-2.3.0/sjmisc/R/set_label.R | 304 +++++----- sjmisc-2.3.0/sjmisc/R/set_labels.R | 817 +++++++++++++-------------- sjmisc-2.3.0/sjmisc/R/set_na.R | 472 +++++++-------- sjmisc-2.3.0/sjmisc/R/split_var.R | 71 +- sjmisc-2.3.0/sjmisc/R/spread_coef.R | 334 ++++++----- sjmisc-2.3.0/sjmisc/R/std.R |only sjmisc-2.3.0/sjmisc/R/to_dummy.R | 28 sjmisc-2.3.0/sjmisc/R/to_factor.R | 47 - sjmisc-2.3.0/sjmisc/R/to_label.R | 70 -- sjmisc-2.3.0/sjmisc/R/to_value.R | 318 +++++----- sjmisc-2.3.0/sjmisc/R/unlabel.R | 114 +-- sjmisc-2.3.0/sjmisc/R/var_labels.R | 53 - sjmisc-2.3.0/sjmisc/R/zap_labels.R | 613 +++++++++----------- sjmisc-2.3.0/sjmisc/README.md | 88 +- sjmisc-2.3.0/sjmisc/build/partial.rdb |binary sjmisc-2.3.0/sjmisc/build/vignette.rds |only sjmisc-2.3.0/sjmisc/inst/doc |only sjmisc-2.3.0/sjmisc/man/add_columns.Rd |only sjmisc-2.3.0/sjmisc/man/add_labels.Rd | 65 +- sjmisc-2.3.0/sjmisc/man/as_labelled.Rd | 4 sjmisc-2.3.0/sjmisc/man/big_mark.Rd | 1 sjmisc-2.3.0/sjmisc/man/copy_labels.Rd | 1 sjmisc-2.3.0/sjmisc/man/count_na.Rd | 24 sjmisc-2.3.0/sjmisc/man/descr.Rd | 12 sjmisc-2.3.0/sjmisc/man/dicho.Rd | 35 - sjmisc-2.3.0/sjmisc/man/efc.Rd | 1 sjmisc-2.3.0/sjmisc/man/empty_cols.Rd | 1 sjmisc-2.3.0/sjmisc/man/find_var.Rd | 1 sjmisc-2.3.0/sjmisc/man/flat_table.Rd | 1 sjmisc-2.3.0/sjmisc/man/frq.Rd | 47 + sjmisc-2.3.0/sjmisc/man/get_label.Rd | 1 sjmisc-2.3.0/sjmisc/man/get_labels.Rd | 8 sjmisc-2.3.0/sjmisc/man/get_na.Rd | 5 sjmisc-2.3.0/sjmisc/man/get_note.Rd | 1 sjmisc-2.3.0/sjmisc/man/get_values.Rd | 3 sjmisc-2.3.0/sjmisc/man/group_str.Rd | 1 sjmisc-2.3.0/sjmisc/man/group_var.Rd | 46 + sjmisc-2.3.0/sjmisc/man/is_crossed.Rd | 1 sjmisc-2.3.0/sjmisc/man/is_empty.Rd | 1 sjmisc-2.3.0/sjmisc/man/is_even.Rd | 1 sjmisc-2.3.0/sjmisc/man/is_labelled.Rd | 1 sjmisc-2.3.0/sjmisc/man/is_num_fac.Rd | 1 sjmisc-2.3.0/sjmisc/man/lbl_df.Rd | 1 sjmisc-2.3.0/sjmisc/man/merge_df.Rd | 21 sjmisc-2.3.0/sjmisc/man/merge_imputations.Rd | 1 sjmisc-2.3.0/sjmisc/man/read_spss.Rd | 3 sjmisc-2.3.0/sjmisc/man/rec.Rd | 59 + sjmisc-2.3.0/sjmisc/man/rec_pattern.Rd | 9 sjmisc-2.3.0/sjmisc/man/recode_to.Rd | 57 + sjmisc-2.3.0/sjmisc/man/ref_lvl.Rd | 32 - sjmisc-2.3.0/sjmisc/man/remove_all_labels.Rd | 1 sjmisc-2.3.0/sjmisc/man/replace_na.Rd | 45 - sjmisc-2.3.0/sjmisc/man/set_label.Rd | 42 - sjmisc-2.3.0/sjmisc/man/set_labels.Rd | 79 +- sjmisc-2.3.0/sjmisc/man/set_na.Rd | 63 +- sjmisc-2.3.0/sjmisc/man/set_note.Rd | 1 sjmisc-2.3.0/sjmisc/man/sjmisc-package.Rd | 66 +- sjmisc-2.3.0/sjmisc/man/split_var.Rd | 31 - sjmisc-2.3.0/sjmisc/man/spread_coef.Rd | 30 sjmisc-2.3.0/sjmisc/man/std.Rd |only sjmisc-2.3.0/sjmisc/man/str_contains.Rd | 1 sjmisc-2.3.0/sjmisc/man/str_pos.Rd | 1 sjmisc-2.3.0/sjmisc/man/to_character.Rd | 29 sjmisc-2.3.0/sjmisc/man/to_dummy.Rd | 20 sjmisc-2.3.0/sjmisc/man/to_factor.Rd | 31 - sjmisc-2.3.0/sjmisc/man/to_label.Rd | 48 - sjmisc-2.3.0/sjmisc/man/to_long.Rd | 1 sjmisc-2.3.0/sjmisc/man/to_value.Rd | 28 sjmisc-2.3.0/sjmisc/man/trim.Rd | 1 sjmisc-2.3.0/sjmisc/man/unlabel.Rd | 1 sjmisc-2.3.0/sjmisc/man/var_rename.Rd | 13 sjmisc-2.3.0/sjmisc/man/word_wrap.Rd | 1 sjmisc-2.3.0/sjmisc/man/write_spss.Rd | 3 sjmisc-2.3.0/sjmisc/man/zap_inf.Rd | 10 sjmisc-2.3.0/sjmisc/man/zap_labels.Rd | 36 - sjmisc-2.3.0/sjmisc/man/zap_na_tags.Rd | 10 sjmisc-2.3.0/sjmisc/vignettes |only 108 files changed, 5147 insertions(+), 4699 deletions(-)
Title: Plotting Methods for 'simmer'
Description: A set of plotting methods for 'simmer' trajectories and simulations.
Author: Iñaki Ucar [aut, cph, cre],
Bart Smeets [aut, cph]
Maintainer: Iñaki Ucar <i.ucar86@gmail.com>
Diff between simmer.plot versions 0.1.6 dated 2017-02-07 and 0.1.7 dated 2017-02-07
DESCRIPTION | 6 ++-- MD5 | 10 +++---- NEWS.md | 6 ++++ inst/doc/plot.simmer.html | 12 ++++----- inst/doc/plot.trajectory.html | 4 +-- tests/testthat/test-plot-trajectory.R | 44 +++------------------------------- 6 files changed, 27 insertions(+), 55 deletions(-)
Title: Identify and Visualize Significantly Responsive Branches in a
Phylogenetic Tree
Description: Provides tools to identify and visualize branches in a phylogenetic tree that are significantly responsive to some intervention, taking as primary inputs a phylogenetic tree (of class phylo) and a data frame (or matrix) of corresponding tip (OTU) labels and p-values.
Author: John R. Stevens and Todd R. Jones
Maintainer: John R. Stevens <john.r.stevens@usu.edu>
Diff between SigTree versions 1.10.4 dated 2017-01-19 and 1.10.5 dated 2017-02-07
DESCRIPTION | 8 ++++---- MD5 | 28 ++++++++++++++-------------- NEWS | 11 +++++++++++ R/adonis.tree.R | 10 +++++++++- inst/CITATION | 4 ++-- inst/doc/SigTree.Rnw | 4 ++-- inst/doc/SigTree.pdf |binary man/SigTree-package.Rd | 6 +++--- man/SigTree.other.Rd | 11 ++++++++--- man/adonis.tree.Rd | 2 +- man/export.figtree.Rd | 2 +- man/export.inherit.Rd | 2 +- man/p2.p1.Rd | 2 +- man/plotSigTree.Rd | 2 +- vignettes/SigTree.Rnw | 4 ++-- 15 files changed, 60 insertions(+), 36 deletions(-)
Title: Kernel Deep Stacking Networks
Description: Contains functions for estimation and model selection of kernel
deep stacking networks. The model selection includes direct optimization or
model based alternatives with arbitrary loss functions.
Author: Thomas Welchowski <welchow@imbie.meb.uni-bonn.de> and Matthias Schmid
<matthias.schmid@imbie.uni-bonn.de>
Maintainer: Thomas Welchowski <welchow@imbie.meb.uni-bonn.de>
Diff between kernDeepStackNet versions 2.0.0 dated 2017-02-06 and 2.0.1 dated 2017-02-07
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- man/getEigenValuesRcpp.Rd | 6 ++++-- man/kernDeepStackNet-package.Rd | 4 ++-- 4 files changed, 13 insertions(+), 11 deletions(-)
More information about kernDeepStackNet at CRAN
Permanent link
Title: Statistics Norway's Miscellaneous Small Tools
Description: Small functions used by other packages from Statistics Norway are gathered. Both general data manipulation functions and some more special functions for statistical disclosure control are included. One reason for a separate package is possible reuse of the functions within a Renjin environment.
Author: Øyvind Langsrud
Maintainer: Øyvind Langsrud <oyl@ssb.no>
Diff between SSBtools versions 0.2 dated 2016-12-28 and 0.2.1 dated 2017-02-07
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/Stack.R | 5 +++-- 3 files changed, 9 insertions(+), 8 deletions(-)
Title: Plotting Methods for 'simmer'
Description: A set of plotting methods for 'simmer' trajectories and simulations.
Author: Iñaki Ucar [aut, cph, cre],
Bart Smeets [aut, cph]
Maintainer: Iñaki Ucar <i.ucar86@gmail.com>
Diff between simmer.plot versions 0.1.5 dated 2017-01-04 and 0.1.6 dated 2017-02-07
DESCRIPTION | 8 MD5 | 39 +-- NEWS.md | 11 R/plot.simmer.R | 26 -- R/plot.trajectory.R | 84 +++---- R/plot_arrivals.R | 6 R/plot_attributes.R | 6 R/plot_resources.R | 17 - R/utils.R |only inst/doc/plot.simmer.R | 6 inst/doc/plot.simmer.Rmd | 8 inst/doc/plot.simmer.html | 18 - inst/doc/plot.trajectory.R | 28 +- inst/doc/plot.trajectory.Rmd | 41 ++- inst/doc/plot.trajectory.html | 45 ++-- man/plot.simmer.Rd | 6 man/plot.trajectory.Rd | 32 -- tests/testthat/test-plot-trajectory.R | 49 ++-- vignettes/includes/trajectory.svg | 377 ++++++++++++++++------------------ vignettes/plot.simmer.Rmd | 8 vignettes/plot.trajectory.Rmd | 41 ++- 21 files changed, 430 insertions(+), 426 deletions(-)
Title: Processes Mining in Medicine
Description: Allows to build and train simple Process Mining (PM) models. The aim is to support PM specifically for the clinical domain from both administrative and clinical data.
Author: Roberto Gatta [aut, cre],
Jacopo Lenkowicz [aut],
Mauro Vallati [aut],
Alessandro Stefanini [aut],
Nicola Dinapoli [ctb],
Berardino De Bari [ctb],
Lucia Sacchi [ctb]
Maintainer: Roberto Gatta <roberto.gatta.bs@gmail.com>
Diff between pMineR versions 0.27 dated 2016-07-15 and 0.31 dated 2017-02-07
pMineR-0.27/pMineR/R/alphaAlgoritm.R |only pMineR-0.27/pMineR/R/petriNetworkModel.R |only pMineR-0.27/pMineR/R/wrappingFunctions.R |only pMineR-0.27/pMineR/man/LD.builder.Rd |only pMineR-0.27/pMineR/man/LD.getData.Rd |only pMineR-0.27/pMineR/man/LD.load.csv.Rd |only pMineR-0.27/pMineR/man/PM.builder.Rd |only pMineR-0.27/pMineR/man/PM.distanceFrom.Rd |only pMineR-0.27/pMineR/man/PM.getModel.Rd |only pMineR-0.27/pMineR/man/PM.loadDataset.Rd |only pMineR-0.27/pMineR/man/PM.play.Rd |only pMineR-0.27/pMineR/man/PM.plot.Rd |only pMineR-0.27/pMineR/man/PM.trainModel.Rd |only pMineR-0.27/pMineR/man/alphaAlgorithm.Rd |only pMineR-0.27/pMineR/src |only pMineR-0.31/pMineR/DESCRIPTION | 17 pMineR-0.31/pMineR/MD5 | 51 - pMineR-0.31/pMineR/NAMESPACE | 23 pMineR-0.31/pMineR/R/cluster_expectationMaximization.R |only pMineR-0.31/pMineR/R/cluster_hierarchicalTree.R |only pMineR-0.31/pMineR/R/cluster_partitionAroundMedoids.R |only pMineR-0.31/pMineR/R/confCheck_easy.R |only pMineR-0.31/pMineR/R/dataLoader.R | 527 ++++++------ pMineR-0.31/pMineR/R/firstOrderMarkovModel.R | 593 +++++++++++--- pMineR-0.31/pMineR/R/logHandler.R | 2 pMineR-0.31/pMineR/R/logInspector.R | 303 +++++-- pMineR-0.31/pMineR/R/meta.dataLoader.R |only pMineR-0.31/pMineR/R/secondOrderMarkovModel.R |only pMineR-0.31/pMineR/R/timelines.R | 39 pMineR-0.31/pMineR/R/utils.R | 179 +++- pMineR-0.31/pMineR/man/cluster_expectationMaximization.Rd |only pMineR-0.31/pMineR/man/cluster_hierarchicalTree.Rd |only pMineR-0.31/pMineR/man/cluster_partitionAroundMedoids.Rd |only pMineR-0.31/pMineR/man/confCheck_easy.Rd |only pMineR-0.31/pMineR/man/dataLoader.Rd | 63 - pMineR-0.31/pMineR/man/dataProcessor.Rd |only pMineR-0.31/pMineR/man/firstOrderMarkovModel.Rd | 96 +- pMineR-0.31/pMineR/man/logInspector.Rd |only pMineR-0.31/pMineR/man/meta.dataLoader.Rd |only pMineR-0.31/pMineR/man/plotTimeline.Rd |only pMineR-0.31/pMineR/man/secondOrderMarkovModel.Rd |only pMineR-0.31/pMineR/man/utils.Rd |only 42 files changed, 1311 insertions(+), 582 deletions(-)
Title: Exploring Machine Learning Better, Together
Description: 'OpenML.org' is an online machine learning platform where
researchers can easily download and upload data sets, share machine learning
tasks and experiments and organize them online to work and collaborate more
effectively.
We provide an R interface to the OpenML REST API in order to download and
upload data sets, tasks, flows and runs, see <http://www.openml.org/guide>
for more information.
Author: Giuseppe Casalicchio <giuseppe.casalicchio@stat.uni-muenchen.de>,
Bernd Bischl <bernd_bischl@gmx.net>,
Dominik Kirchhoff <dom.kirchhoff@gmail.com>,
Michel Lang <michellang@gmail.com>,
Benjamin Hofner <benjamin.hofner@fau.de>,
Jakob Bossek <j.bossek@gmail.com>,
Pascal Kerschke <kerschke@uni-muenster.de>,
Joaquin Vanschoren <joaquin.vanschoren@gmail.com>
Maintainer: Giuseppe Casalicchio <giuseppe.casalicchio@stat.uni-muenchen.de>
Diff between OpenML versions 1.1 dated 2016-11-23 and 1.2 dated 2017-02-07
DESCRIPTION | 20 +++++----- MD5 | 32 ++++++++-------- NEWS | 4 +- R/OMLDataSetDescription_Class.R | 2 - R/OMLDataSet_Class.R | 2 - R/config_helpers.R | 5 ++ R/convertOMLDataSetToMlr.R | 29 +++++++++++--- R/convertOMLMlrRunToBMR.R | 36 ------------------ R/convertOMLRunToBMR.R | 78 ++++------------------------------------ R/downloadOMLObject.R | 7 +-- R/getOMLDataSet.R | 6 ++- R/helpers.R | 13 ++++++ R/uploadOMLDataSet.R | 9 +++- R/writeOMLDataSetXML.R | 4 +- inst/doc/OpenML.pdf |binary man/OMLDataSet.Rd | 3 + man/convertOMLDataSetToMlr.Rd | 7 +++ 17 files changed, 106 insertions(+), 151 deletions(-)
Title: MOSAIC - Basic Quality Data Assurance for Epidemiologic Research
Description: With the provision of several tools and templates the MOSAIC project (DFG-Grant Number HO 1937/2-1) supports the implementation of a central data management in epidemiological research projects. The 'mosaicQA' package enables epidemiologists with none or low experience in R to generate basic data quality reports for a wide range of application scenarios. See <https://mosaic-greifswald.de/> for more information.
Author: Martin Bialke <mosaic@uni-greifswald.de>, Thea Schwaneberg <thea.schwaneberg@uni-greifswald.de>, Rene Walk <rene.walk@uni-greifswald.de>
Maintainer: Martin Bialke <mosaic@uni-greifswald.de>
Diff between mosaicQA versions 1.0.1 dated 2016-09-17 and 1.2.0 dated 2017-02-07
mosaicQA-1.0.1/mosaicQA/R/mosaic_en_v1.0.1.r |only mosaicQA-1.0.1/mosaicQA/man/mosaic.createSimplePdfcategorial.Rd |only mosaicQA-1.0.1/mosaicQA/man/mosaic.createSimplePdfmetric.Rd |only mosaicQA-1.0.1/mosaicQA/man/mosaic.generateCategorialPlot.Rd |only mosaicQA-1.0.1/mosaicQA/man/mosaic.preProcessCategorialData.Rd |only mosaicQA-1.2.0/mosaicQA/DESCRIPTION | 8 +- mosaicQA-1.2.0/mosaicQA/MD5 | 18 ++-- mosaicQA-1.2.0/mosaicQA/R/mosaic_en_v1.2.r |only mosaicQA-1.2.0/mosaicQA/build/partial.rdb |binary mosaicQA-1.2.0/mosaicQA/man/mosaic.createSimplePdfCategorical.Rd |only mosaicQA-1.2.0/mosaicQA/man/mosaic.createSimplePdfCategoricalDataframe.Rd |only mosaicQA-1.2.0/mosaicQA/man/mosaic.createSimplePdfMetric.Rd |only mosaicQA-1.2.0/mosaicQA/man/mosaic.createSimplePdfMetricDataframe.Rd |only mosaicQA-1.2.0/mosaicQA/man/mosaic.generateCategoricalPlot.Rd |only mosaicQA-1.2.0/mosaicQA/man/mosaic.preProcessCategoricalData.Rd |only mosaicQA-1.2.0/mosaicQA/man/mosaicQA-package.Rd | 38 ++++++++-- 16 files changed, 47 insertions(+), 17 deletions(-)
Title: Joint Confidence Regions
Description: Computing and plotting joint confidence regions and intervals. Regions include classical ellipsoids, minimum-volume or minimum-length regions, and an empirical Bayes region. Intervals include the TOST procedure with ordinary or expanded intervals and a fixed-sequence procedure. Such regions and intervals are useful e.g., for the assessment of multi-parameter (bio-)equivalence. Joint confidence regions for the mean and variance of a normal distribution are available as well.
Author: Philip Pallmann [aut, cre]
Maintainer: Philip Pallmann <p.pallmann@lancaster.ac.uk>
Diff between jocre versions 0.3 dated 2017-02-03 and 0.3.1 dated 2017-02-07
DESCRIPTION | 8 +- MD5 | 18 ++-- R/cset.R | 59 +++++++++++++--- R/csetMV.R | 186 +++++++++++++++++++++++++++++++++++++++++++++++++-- R/helpers.R | 14 +-- inst/CITATION | 2 inst/NEWS | 7 + man/csetMV.Rd | 4 - man/jocre-package.Rd | 10 +- man/wires.Rd | 2 10 files changed, 266 insertions(+), 44 deletions(-)
Title: Model Based Treatment of Missing Data
Description:
Contains model-based treatment of missing data for regression models
with missing values in covariates or the dependent variable
using maximum likelihood or Bayesian estimation.
Multiple imputation can be also conducted.
Author:
Alexander Robitzsch [aut, cre], Oliver Luedtke [aut]
Maintainer:
Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between mdmb versions 0.1-0 dated 2017-01-26 and 0.2-0 dated 2017-02-07
DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- R/dbct_scaled.R | 1 + R/frm_fb.R | 6 ++++-- R/frm_fb_init_imputations.R | 15 +++++++++++---- R/frm_fb_initial_parameters.R | 4 ++-- R/frm_fb_sample_imputed_values.R | 8 ++++---- R/frm_fb_sample_imputed_values_eval_likelihood.R | 1 - R/mdmb_regression.R | 7 ++++--- inst/NEWS | 9 +++++++++ man/mdmb-package.Rd | 2 +- 11 files changed, 50 insertions(+), 31 deletions(-)
Title: Comprehensive Luminescence Dating Data Analysis
Description: A collection of various R functions for the purpose of Luminescence
dating data analysis. This includes, amongst others, data import, export,
application of age models, curve deconvolution, sequence analysis and
plotting of equivalent dose distributions.
Author: Sebastian Kreutzer [aut, trl, cre, dtc],
Michael Dietze [aut],
Christoph Burow [aut, trl, dtc],
Margret C. Fuchs [aut],
Christoph Schmidt [aut],
Manfred Fischer [aut, trl],
Johannes Friedrich [aut],
Norbert Mercier [ctb],
Rachel K. Smedley [ctb],
Claire Christophe [ctb],
Antoine Zink [ctb],
Julie Durcan [ctb],
Georgina King [ctb, dtc],
Anne Philippe [ctb],
Guillaume Guerin [ctb],
Markus Fuchs [ths]
Maintainer: Sebastian Kreutzer <sebastian.kreutzer@u-bordeaux-montaigne.fr>
Diff between Luminescence versions 0.7.0 dated 2017-02-06 and 0.7.1 dated 2017-02-07
DESCRIPTION | 8 - MD5 | 214 ++++++++++++++++----------------- R/Luminescence-package.R | 2 man/Analyse_SAR.OSLdata.Rd | 2 man/CW2pHMi.Rd | 2 man/CW2pLM.Rd | 2 man/CW2pLMi.Rd | 2 man/CW2pPMi.Rd | 2 man/GitHub-API.Rd | 2 man/Luminescence-package.Rd | 2 man/PSL2Risoe.BINfileData.Rd | 2 man/RLum-class.Rd | 2 man/RLum.Analysis-class.Rd | 2 man/RLum.Data.Curve-class.Rd | 2 man/RLum.Data.Image-class.Rd | 2 man/RLum.Data.Spectrum-class.Rd | 2 man/RLum.Results-class.Rd | 2 man/Risoe.BINfileData-class.Rd | 2 man/Risoe.BINfileData2RLum.Analysis.Rd | 2 man/Second2Gray.Rd | 2 man/analyse_FadingMeasurement.Rd | 2 man/analyse_IRSAR.RF.Rd | 2 man/analyse_SAR.CWOSL.Rd | 2 man/analyse_SAR.TL.Rd | 2 man/analyse_baSAR.Rd | 2 man/analyse_pIRIRSequence.Rd | 2 man/analyse_portableOSL.Rd | 2 man/app_RLum.Rd | 2 man/apply_CosmicRayRemoval.Rd | 2 man/apply_EfficiencyCorrection.Rd | 2 man/bin_RLum.Data.Rd | 2 man/calc_AliquotSize.Rd | 2 man/calc_AverageDose.Rd | 2 man/calc_CentralDose.Rd | 2 man/calc_CommonDose.Rd | 2 man/calc_CosmicDoseRate.Rd | 2 man/calc_FadingCorr.Rd | 2 man/calc_FastRatio.Rd | 2 man/calc_FiniteMixture.Rd | 2 man/calc_FuchsLang2001.Rd | 2 man/calc_HomogeneityTest.Rd | 2 man/calc_IEU.Rd | 2 man/calc_Kars2008.Rd | 2 man/calc_MaxDose.Rd | 2 man/calc_MinDose.Rd | 2 man/calc_OSLLxTxRatio.Rd | 2 man/calc_SourceDoseRate.Rd | 2 man/calc_Statistics.Rd | 2 man/calc_TLLxTxRatio.Rd | 2 man/calc_ThermalLifetime.Rd | 2 man/calc_gSGC.Rd | 2 man/convert_BIN2CSV.Rd | 2 man/convert_Daybreak2CSV.Rd | 2 man/convert_PSL2CSV.Rd | 2 man/convert_XSYG2CSV.Rd | 2 man/extract_IrradiationTimes.Rd | 2 man/fit_CWCurve.Rd | 2 man/fit_LMCurve.Rd | 2 man/get_Layout.Rd | 2 man/get_Quote.Rd | 2 man/get_RLum.Rd | 2 man/get_Risoe.BINfileData.Rd | 2 man/get_rightAnswer.Rd | 2 man/length_RLum.Rd | 2 man/merge_RLum.Analysis.Rd | 2 man/merge_RLum.Data.Curve.Rd | 2 man/merge_RLum.Rd | 2 man/merge_RLum.Results.Rd | 2 man/merge_Risoe.BINfileData.Rd | 2 man/model_LuminescenceSignals.Rd | 2 man/names_RLum.Rd | 2 man/plot_AbanicoPlot.Rd | 2 man/plot_DRTResults.Rd | 2 man/plot_DetPlot.Rd | 2 man/plot_FilterCombinations.Rd | 2 man/plot_GrowthCurve.Rd | 2 man/plot_Histogram.Rd | 2 man/plot_KDE.Rd | 2 man/plot_NRt.Rd | 2 man/plot_RLum.Analysis.Rd | 2 man/plot_RLum.Data.Curve.Rd | 2 man/plot_RLum.Data.Image.Rd | 2 man/plot_RLum.Data.Spectrum.Rd | 2 man/plot_RLum.Rd | 2 man/plot_RLum.Results.Rd | 2 man/plot_RadialPlot.Rd | 2 man/plot_Risoe.BINfileData.Rd | 2 man/plot_ViolinPlot.Rd | 2 man/read_BIN2R.Rd | 2 man/read_Daybreak2R.Rd | 2 man/read_PSL2R.Rd | 2 man/read_SPE2R.Rd | 2 man/read_XSYG2R.Rd | 2 man/replicate_RLum.Rd | 2 man/report_RLum.Rd | 2 man/sTeve.Rd | 2 man/set_RLum.Rd | 2 man/set_Risoe.BINfileData.Rd | 2 man/smooth_RLum.Rd | 2 man/structure_RLum.Rd | 2 man/template_DRAC.Rd | 2 man/tune_Data.Rd | 2 man/use_DRAC.Rd | 2 man/verify_SingleGrainData.Rd | 2 man/write_R2BIN.Rd | 2 man/write_RLum2CSV.Rd | 2 src/RcppExports.cpp | 8 - src/analyse_IRSARRF_SRS.cpp | 8 - 108 files changed, 223 insertions(+), 223 deletions(-)
Title: Connect to ODBC Compatible Databases (using the DBI Interface)
Description: A DBI-compatible interface to ODBC databases.
Author: Jim Hester [aut, cre],
Hadley Wickham [aut],
lexicalunit [cph] (nanodbc library),
RStudio [cph, fnd]
Maintainer: Jim Hester <james.hester@rstudio.com>
Diff between odbc versions 1.0.0 dated 2017-02-05 and 1.0.1 dated 2017-02-07
DESCRIPTION | 6 +++--- MD5 | 9 +++++---- NEWS.md |only configure | 10 +++++----- src/Makevars.win | 2 +- tests/testthat/helper.R | 3 +++ 6 files changed, 17 insertions(+), 13 deletions(-)
Title: Easy Downloading Capabilities for the Members' Name Information
Service
Description: An API package for the Members' Name Information Service operated by the UK parliament. Documentation for the API itself can be found here: <http://data.parliament.uk/membersdataplatform/default.aspx>.
Author: Evan Odell [aut, cre]
Maintainer: Evan Odell <evanodell91@gmail.com>
Diff between mnis versions 0.1.0 dated 2016-12-29 and 0.2.1 dated 2017-02-07
mnis-0.1.0/mnis/R/mnis_Additional.R |only mnis-0.1.0/mnis/R/mnis_Base.R |only mnis-0.1.0/mnis/R/mnis_ConstituencyResults.R |only mnis-0.1.0/mnis/R/mnis_Extra.R |only mnis-0.1.0/mnis/R/mnis_FullBiog.R |only mnis-0.1.0/mnis/R/mnis_GeneralElectionResults.R |only mnis-0.1.0/mnis/R/mnis_LordsType.R |only mnis-0.1.0/mnis/R/mnis_MemberDate.R |only mnis-0.1.0/mnis/R/mnis_PartyState.R |only mnis-0.1.0/mnis/man/mnis_Additional.Rd |only mnis-0.1.0/mnis/man/mnis_Base.Rd |only mnis-0.1.0/mnis/man/mnis_ConstituencyResults.Rd |only mnis-0.1.0/mnis/man/mnis_Department.Rd |only mnis-0.1.0/mnis/man/mnis_Extra.Rd |only mnis-0.1.0/mnis/man/mnis_FullBiog.Rd |only mnis-0.1.0/mnis/man/mnis_GeneralElectionResults.Rd |only mnis-0.1.0/mnis/man/mnis_LordsType.Rd |only mnis-0.1.0/mnis/man/mnis_MemberDate.Rd |only mnis-0.1.0/mnis/man/mnis_PartyState.Rd |only mnis-0.1.0/mnis/man/mnis_Reference.Rd |only mnis-0.2.1/mnis/DESCRIPTION | 10 mnis-0.2.1/mnis/MD5 | 72 mnis-0.2.1/mnis/NAMESPACE | 83 mnis-0.2.1/mnis/NEWS.md | 34 mnis-0.2.1/mnis/R/mnis.R | 28 mnis-0.2.1/mnis/R/mnis_Department.R | 83 mnis-0.2.1/mnis/R/mnis_Reference.R | 1614 ++++++++++++------- mnis-0.2.1/mnis/R/mnis_additional.R |only mnis-0.2.1/mnis/R/mnis_all_members.R |only mnis-0.2.1/mnis/R/mnis_base.R |only mnis-0.2.1/mnis/R/mnis_constituency_results.R |only mnis-0.2.1/mnis/R/mnis_eligible.R |only mnis-0.2.1/mnis/R/mnis_extra.R |only mnis-0.2.1/mnis/R/mnis_full_biog.R |only mnis-0.2.1/mnis/R/mnis_general_election_results.R |only mnis-0.2.1/mnis/R/mnis_joined_between.R |only mnis-0.2.1/mnis/R/mnis_lords_type.R |only mnis-0.2.1/mnis/R/mnis_member_date.R |only mnis-0.2.1/mnis/R/mnis_party_state.R |only mnis-0.2.1/mnis/R/mnis_tidy.R |only mnis-0.2.1/mnis/README.md | 15 mnis-0.2.1/mnis/inst/doc/introduction.R | 4 mnis-0.2.1/mnis/inst/doc/introduction.Rmd | 175 +- mnis-0.2.1/mnis/inst/doc/introduction.html | 146 - mnis-0.2.1/mnis/man/mnis.Rd | 28 mnis-0.2.1/mnis/man/mnis_additional.Rd |only mnis-0.2.1/mnis/man/mnis_all_members.Rd |only mnis-0.2.1/mnis/man/mnis_base.Rd |only mnis-0.2.1/mnis/man/mnis_constituency_results.Rd |only mnis-0.2.1/mnis/man/mnis_department.Rd |only mnis-0.2.1/mnis/man/mnis_eligible.Rd |only mnis-0.2.1/mnis/man/mnis_extra.Rd |only mnis-0.2.1/mnis/man/mnis_full_biog.Rd |only mnis-0.2.1/mnis/man/mnis_general_election_results.Rd |only mnis-0.2.1/mnis/man/mnis_joined_between.Rd |only mnis-0.2.1/mnis/man/mnis_lords_type.Rd |only mnis-0.2.1/mnis/man/mnis_member_date.Rd |only mnis-0.2.1/mnis/man/mnis_party_state.Rd |only mnis-0.2.1/mnis/man/mnis_reference.Rd |only mnis-0.2.1/mnis/man/mnis_tidy.Rd |only mnis-0.2.1/mnis/vignettes/introduction.Rmd | 175 +- 61 files changed, 1599 insertions(+), 868 deletions(-)
Title: Machine Learning in R
Description: Interface to a large number of classification and regression
techniques, including machine-readable parameter descriptions. There is
also an experimental extension for survival analysis, clustering and
general, example-specific cost-sensitive learning. Generic resampling,
including cross-validation, bootstrapping and subsampling. Hyperparameter
tuning with modern optimization techniques, for single- and multi-objective
problems. Filter and wrapper methods for feature selection. Extension of
basic learners with additional operations common in machine learning, also
allowing for easy nested resampling. Most operations can be parallelized.
Author: Bernd Bischl [aut, cre],
Michel Lang [aut],
Lars Kotthoff [aut],
Julia Schiffner [aut],
Jakob Richter [aut],
Zachary Jones [aut],
Giuseppe Casalicchio [aut],
Mason Gallo [aut],
Jakob Bossek [ctb],
Erich Studerus [ctb],
Leonard Judt [ctb],
Tobias Kuehn [ctb],
Pascal Kerschke [ctb],
Florian Fendt [ctb],
Philipp Probst [ctb],
Xudong Sun [ctb],
Janek Thomas [ctb],
Bruno Vieira [ctb]
Maintainer: Bernd Bischl <bernd_bischl@gmx.net>
Diff between mlr versions 2.9 dated 2016-08-03 and 2.10 dated 2017-02-07
mlr-2.10/mlr/DESCRIPTION | 59 mlr-2.10/mlr/LICENSE | 2 mlr-2.10/mlr/MD5 | 988 +++++----- mlr-2.10/mlr/NAMESPACE | 136 + mlr-2.10/mlr/NEWS.md |only mlr-2.10/mlr/R/Aggregation.R | 12 mlr-2.10/mlr/R/BaggingWrapper.R | 2 mlr-2.10/mlr/R/BenchmarkResult_operators.R | 22 mlr-2.10/mlr/R/CostSensClassifWrapper.R | 2 mlr-2.10/mlr/R/CostSensRegrWrapper.R | 2 mlr-2.10/mlr/R/CostSensWeightedPairsWrapper.R | 9 mlr-2.10/mlr/R/DownsampleWrapper.R | 1 mlr-2.10/mlr/R/Filter.R | 283 ++ mlr-2.10/mlr/R/FilterWrapper.R | 6 mlr-2.10/mlr/R/ImputeMethods.R | 36 mlr-2.10/mlr/R/ImputeWrapper.R | 5 mlr-2.10/mlr/R/Learner.R | 9 mlr-2.10/mlr/R/Learner_operators.R |only mlr-2.10/mlr/R/Learner_properties.R | 17 mlr-2.10/mlr/R/Measure.R | 6 mlr-2.10/mlr/R/Measure_colAUC.R | 21 mlr-2.10/mlr/R/Measure_custom_resampled.R | 24 mlr-2.10/mlr/R/ModelMultiplexer.R | 1 mlr-2.10/mlr/R/MultilabelBinaryRelevanceWrapper.R | 6 mlr-2.10/mlr/R/OverUndersampleWrapper.R | 2 mlr-2.10/mlr/R/Prediction.R | 8 mlr-2.10/mlr/R/RLearner.R | 2 mlr-2.10/mlr/R/RLearner_classif_RRF.R | 32 mlr-2.10/mlr/R/RLearner_classif_ada.R | 25 mlr-2.10/mlr/R/RLearner_classif_blackboost.R | 68 mlr-2.10/mlr/R/RLearner_classif_boosting.R | 8 mlr-2.10/mlr/R/RLearner_classif_cforest.R | 23 mlr-2.10/mlr/R/RLearner_classif_earth.R |only mlr-2.10/mlr/R/RLearner_classif_evtree.R |only mlr-2.10/mlr/R/RLearner_classif_featureless.R |only mlr-2.10/mlr/R/RLearner_classif_fnn.R | 3 mlr-2.10/mlr/R/RLearner_classif_gamboost.R |only mlr-2.10/mlr/R/RLearner_classif_gbm.R | 8 mlr-2.10/mlr/R/RLearner_classif_glmboost.R | 60 mlr-2.10/mlr/R/RLearner_classif_h2odeeplearning.R | 22 mlr-2.10/mlr/R/RLearner_classif_h2ogbm.R | 15 mlr-2.10/mlr/R/RLearner_classif_h2oglm.R | 21 mlr-2.10/mlr/R/RLearner_classif_h2orandomForest.R | 17 mlr-2.10/mlr/R/RLearner_classif_hdrda.R | 2 mlr-2.10/mlr/R/RLearner_classif_kknn.R | 5 mlr-2.10/mlr/R/RLearner_classif_ksvm.R | 4 mlr-2.10/mlr/R/RLearner_classif_lssvm.R | 4 mlr-2.10/mlr/R/RLearner_classif_nodeHarvest.R | 4 mlr-2.10/mlr/R/RLearner_classif_randomForest.R | 21 mlr-2.10/mlr/R/RLearner_classif_randomForestSRC.R | 8 mlr-2.10/mlr/R/RLearner_classif_ranger.R | 26 mlr-2.10/mlr/R/RLearner_classif_rpart.R | 8 mlr-2.10/mlr/R/RLearner_classif_xgboost.R | 161 - mlr-2.10/mlr/R/RLearner_cluster_cmeans.R | 9 mlr-2.10/mlr/R/RLearner_multilabel_cforest.R |only mlr-2.10/mlr/R/RLearner_multilabel_randomForestSRC.R | 34 mlr-2.10/mlr/R/RLearner_regr_GPfit.R | 19 mlr-2.10/mlr/R/RLearner_regr_RRF.R | 18 mlr-2.10/mlr/R/RLearner_regr_avNNet.R | 6 mlr-2.10/mlr/R/RLearner_regr_bartMachine.R |only mlr-2.10/mlr/R/RLearner_regr_blackboost.R |only mlr-2.10/mlr/R/RLearner_regr_cforest.R | 20 mlr-2.10/mlr/R/RLearner_regr_cvglmnet.R |only mlr-2.10/mlr/R/RLearner_regr_evtree.R |only mlr-2.10/mlr/R/RLearner_regr_featureless.R |only mlr-2.10/mlr/R/RLearner_regr_fnn.R | 4 mlr-2.10/mlr/R/RLearner_regr_gamboost.R |only mlr-2.10/mlr/R/RLearner_regr_gausspr.R | 4 mlr-2.10/mlr/R/RLearner_regr_gbm.R | 7 mlr-2.10/mlr/R/RLearner_regr_glmboost.R | 44 mlr-2.10/mlr/R/RLearner_regr_h2oglm.R | 4 mlr-2.10/mlr/R/RLearner_regr_kknn.R | 5 mlr-2.10/mlr/R/RLearner_regr_km.R | 4 mlr-2.10/mlr/R/RLearner_regr_ksvm.R | 4 mlr-2.10/mlr/R/RLearner_regr_laGP.R | 18 mlr-2.10/mlr/R/RLearner_regr_nodeHarvest.R | 2 mlr-2.10/mlr/R/RLearner_regr_randomForest.R | 7 mlr-2.10/mlr/R/RLearner_regr_randomForestSRC.R | 9 mlr-2.10/mlr/R/RLearner_regr_ranger.R | 19 mlr-2.10/mlr/R/RLearner_regr_rpart.R | 8 mlr-2.10/mlr/R/RLearner_regr_xgboost.R | 79 mlr-2.10/mlr/R/RLearner_surv_cforest.R | 18 mlr-2.10/mlr/R/RLearner_surv_gamboost.R |only mlr-2.10/mlr/R/RLearner_surv_gbm.R |only mlr-2.10/mlr/R/RLearner_surv_glmboost.R | 38 mlr-2.10/mlr/R/RLearner_surv_randomForestSRC.R | 7 mlr-2.10/mlr/R/RLearner_surv_ranger.R | 21 mlr-2.10/mlr/R/RLearner_surv_rpart.R | 10 mlr-2.10/mlr/R/RemoveConstantFeaturesWrapper.R |only mlr-2.10/mlr/R/ResampleDesc.R | 64 mlr-2.10/mlr/R/ResampleInstance.R | 7 mlr-2.10/mlr/R/ResampleInstances.R | 90 mlr-2.10/mlr/R/ResamplePrediction.R | 29 mlr-2.10/mlr/R/ResampleResult.R | 15 mlr-2.10/mlr/R/ResampleResult_operators.R | 127 + mlr-2.10/mlr/R/SupervisedTask.R | 2 mlr-2.10/mlr/R/Task.R | 22 mlr-2.10/mlr/R/Task_operators.R | 19 mlr-2.10/mlr/R/WeightedClassesWrapper.R | 6 mlr-2.10/mlr/R/WrappedModel.R | 2 mlr-2.10/mlr/R/aggregations.R | 27 mlr-2.10/mlr/R/benchmark.R | 8 mlr-2.10/mlr/R/calculateConfusionMatrix.R |only mlr-2.10/mlr/R/calculateROCMeasures.R |only mlr-2.10/mlr/R/checkAggrBeforeResample.R |only mlr-2.10/mlr/R/checkLearner.R | 29 mlr-2.10/mlr/R/convertBMRToRankMatrix.R | 22 mlr-2.10/mlr/R/convertX.R | 29 mlr-2.10/mlr/R/createDummyFeatures.R | 61 mlr-2.10/mlr/R/evalOptimizationState.R | 12 mlr-2.10/mlr/R/filterFeatures.R | 4 mlr-2.10/mlr/R/friedmanPostHocTestBMR.R | 13 mlr-2.10/mlr/R/friedmanTestBMR.R | 16 mlr-2.10/mlr/R/generateCalibration.R | 27 mlr-2.10/mlr/R/generateFeatureImportance.R |only mlr-2.10/mlr/R/generateFilterValues.R | 34 mlr-2.10/mlr/R/generateHyperParsEffect.R | 409 ++-- mlr-2.10/mlr/R/generateLearningCurve.R | 19 mlr-2.10/mlr/R/generatePartialDependence.R | 424 ++-- mlr-2.10/mlr/R/generateThreshVsPerf.R | 42 mlr-2.10/mlr/R/getCaretParamSet.R | 22 mlr-2.10/mlr/R/getClassWeightParam.R | 2 mlr-2.10/mlr/R/getConfMatrix.R | 48 mlr-2.10/mlr/R/getFeatureImportance.R |only mlr-2.10/mlr/R/getHyperPars.R | 4 mlr-2.10/mlr/R/getNestedTuneResults.R | 10 mlr-2.10/mlr/R/getTuneThresholdExtra.R |only mlr-2.10/mlr/R/helpers.R | 13 mlr-2.10/mlr/R/learnerArgsToControl.R | 7 mlr-2.10/mlr/R/listLearners.R | 21 mlr-2.10/mlr/R/makeLearner.R | 18 mlr-2.10/mlr/R/makeLearners.R |only mlr-2.10/mlr/R/measures.R | 425 +++- mlr-2.10/mlr/R/mergeBenchmarkResults.R |only mlr-2.10/mlr/R/options.R | 11 mlr-2.10/mlr/R/performance.R | 19 mlr-2.10/mlr/R/plotBMRBoxplots.R | 14 mlr-2.10/mlr/R/plotBMRRanksAsBarChart.R | 29 mlr-2.10/mlr/R/plotBMRSummary.R | 18 mlr-2.10/mlr/R/plotCritDifferences.R | 17 mlr-2.10/mlr/R/plotLearnerPrediction.R | 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mlr-2.10/mlr/man/FailureModel.Rd | 1 mlr-2.10/mlr/man/FeatSelControl.Rd | 6 mlr-2.10/mlr/man/FeatSelResult.Rd | 1 mlr-2.10/mlr/man/LearnerProperties.Rd | 16 mlr-2.10/mlr/man/Prediction.Rd | 10 mlr-2.10/mlr/man/RLearner.Rd | 5 mlr-2.10/mlr/man/ResamplePrediction.Rd | 4 mlr-2.10/mlr/man/ResampleResult.Rd | 7 mlr-2.10/mlr/man/Task.Rd | 42 mlr-2.10/mlr/man/TaskDesc.Rd | 1 mlr-2.10/mlr/man/TuneControl.Rd | 9 mlr-2.10/mlr/man/TuneMultiCritControl.Rd | 7 mlr-2.10/mlr/man/TuneMultiCritResult.Rd | 1 mlr-2.10/mlr/man/TuneResult.Rd | 1 mlr-2.10/mlr/man/addRRMeasure.Rd |only mlr-2.10/mlr/man/aggregations.Rd | 21 mlr-2.10/mlr/man/agri.task.Rd | 1 mlr-2.10/mlr/man/analyzeFeatSelResult.Rd | 1 mlr-2.10/mlr/man/asROCRPrediction.Rd | 6 mlr-2.10/mlr/man/bc.task.Rd | 1 mlr-2.10/mlr/man/benchmark.Rd | 7 mlr-2.10/mlr/man/bh.task.Rd | 1 mlr-2.10/mlr/man/calculateConfusionMatrix.Rd |only mlr-2.10/mlr/man/calculateROCMeasures.Rd |only mlr-2.10/mlr/man/capLargeValues.Rd | 1 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| 25 mlr-2.10/mlr/tests/testthat/test_classif_neuralnet.R | 32 mlr-2.10/mlr/tests/testthat/test_classif_nnTrain.R | 31 mlr-2.10/mlr/tests/testthat/test_classif_nnet.R | 24 mlr-2.10/mlr/tests/testthat/test_classif_nodeHarvest.R | 1 mlr-2.10/mlr/tests/testthat/test_classif_penalized_fusedlasso.R | 8 mlr-2.10/mlr/tests/testthat/test_classif_rda.R | 1 mlr-2.10/mlr/tests/testthat/test_classif_rknn.R | 1 mlr-2.10/mlr/tests/testthat/test_classif_saeDNN.R | 25 mlr-2.10/mlr/tests/testthat/test_classif_svm.R | 50 mlr-2.10/mlr/tests/testthat/test_classif_xgboost.R | 73 mlr-2.10/mlr/tests/testthat/test_cluster_FarthestFirst.R | 1 mlr-2.10/mlr/tests/testthat/test_cluster_cmeans.R | 4 mlr-2.10/mlr/tests/testthat/test_cluster_kkmeans.R | 1 mlr-2.10/mlr/tests/testthat/test_cluster_kmeans.R | 3 mlr-2.10/mlr/tests/testthat/test_featsel_FilterWrapper.R | 2 mlr-2.10/mlr/tests/testthat/test_featsel_filters.R | 37 mlr-2.10/mlr/tests/testthat/test_learners_all_classif.R | 19 mlr-2.10/mlr/tests/testthat/test_learners_all_clusters.R | 5 mlr-2.10/mlr/tests/testthat/test_learners_all_general.R | 5 mlr-2.10/mlr/tests/testthat/test_learners_all_multilabel.R | 43 mlr-2.10/mlr/tests/testthat/test_learners_all_regr.R | 9 mlr-2.10/mlr/tests/testthat/test_learners_all_surv.R | 9 mlr-2.10/mlr/tests/testthat/test_multilabel_cforest.R |only mlr-2.10/mlr/tests/testthat/test_multilabel_randomForestSRC.R | 20 mlr-2.10/mlr/tests/testthat/test_parallel_all.R | 2 mlr-2.10/mlr/tests/testthat/test_regr_LiblineaRL2L1SVR.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_LiblineaRL2L2SVR.R | 25 mlr-2.10/mlr/tests/testthat/test_regr_avNNet.R | 41 mlr-2.10/mlr/tests/testthat/test_regr_bartMachine.R |only mlr-2.10/mlr/tests/testthat/test_regr_bcart.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_bgp.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_bgpllm.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_blackboost.R | 44 mlr-2.10/mlr/tests/testthat/test_regr_blm.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_btgp.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_btgpllm.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_btlm.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_crs.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_cvglmnet.R |only mlr-2.10/mlr/tests/testthat/test_regr_evtree.R |only mlr-2.10/mlr/tests/testthat/test_regr_featureless.R |only mlr-2.10/mlr/tests/testthat/test_regr_frbs.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_gamboost.R |only mlr-2.10/mlr/tests/testthat/test_regr_glmboost.R | 46 mlr-2.10/mlr/tests/testthat/test_regr_km.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_laGP.R | 9 mlr-2.10/mlr/tests/testthat/test_regr_mob.R | 16 mlr-2.10/mlr/tests/testthat/test_regr_nnet.R | 16 mlr-2.10/mlr/tests/testthat/test_regr_nodeHarvest.R | 1 mlr-2.10/mlr/tests/testthat/test_regr_penalized_fusedlasso.R | 18 mlr-2.10/mlr/tests/testthat/test_regr_ranger.R | 2 mlr-2.10/mlr/tests/testthat/test_regr_rknn.R | 4 mlr-2.10/mlr/tests/testthat/test_regr_xgboost.R | 40 mlr-2.10/mlr/tests/testthat/test_surv_cv.CoxBoost.R | 20 mlr-2.10/mlr/tests/testthat/test_surv_gamboost.R |only mlr-2.10/mlr/tests/testthat/test_surv_gbm.R |only mlr-2.10/mlr/tests/testthat/test_surv_glmboost.R | 25 mlr-2.10/mlr/tests/testthat/test_surv_penalized_lasso.R | 1 mlr-2.10/mlr/tests/testthat/test_surv_penalized_ridge.R | 1 mlr-2.10/mlr/tests/testthat/test_surv_ranger.R | 5 mlr-2.10/mlr/tests/testthat/test_tune_tuneIrace.R | 3 mlr-2.10/mlr/tests/testthat/test_tune_tuneThreshold.R | 18 mlr-2.10/mlr/vignettes/mlr.Rmd | 2 mlr-2.9/mlr/NEWS |only mlr-2.9/mlr/R/RLearner_classif_randomForestSRCSyn.R |only mlr-2.9/mlr/R/RLearner_regr_blackBoost.R |only mlr-2.9/mlr/R/RLearner_regr_randomForestSRCSyn.R |only mlr-2.9/mlr/R/benchmarkResult_mergers.R |only mlr-2.9/mlr/R/makeRemoveConstantFeaturesWrapper.R |only mlr-2.9/mlr/man/mergeBenchmarkResultLearner.Rd |only mlr-2.9/mlr/man/mergeBenchmarkResultTask.Rd |only mlr-2.9/mlr/tests/testthat/test_base_benchmark_merger.R |only mlr-2.9/mlr/tests/testthat/test_base_filterFeatures.R |only mlr-2.9/mlr/tests/testthat/test_base_getConfMatrix.R |only mlr-2.9/mlr/tests/testthat/test_base_plotRankMatrixAsBar.R |only mlr-2.9/mlr/tests/testthat/test_base_resample_dps.R |only mlr-2.9/mlr/tests/testthat/test_base_rocr.R |only mlr-2.9/mlr/tests/testthat/test_classif_randomForestSRCSyn.R |only mlr-2.9/mlr/tests/testthat/test_regr_randomForestSRCSyn.R |only 540 files changed, 6597 insertions(+), 3560 deletions(-)
Title: Clinical Trial Simulations
Description: Provides a general framework for clinical trial simulations based
on the Clinical Scenario Evaluation (CSE) approach. The package supports a
broad class of data models (including clinical trials with continuous, binary,
survival-type and count-type endpoints as well as multivariate outcomes that are
based on combinations of different endpoints), analysis strategies and commonly
used evaluation criteria.
Author: Gautier Paux, Alex Dmitrienko.
Maintainer: Gautier Paux <gautier@paux.fr>
Diff between Mediana versions 1.0.3 dated 2016-08-25 and 1.0.4 dated 2017-02-07
DESCRIPTION | 10 ++--- MD5 | 45 +++++++++++++------------ NEWS.md |only R/CreateAnalysisStructure.R | 6 ++- R/CreateReportStructure.R | 28 +++++++-------- R/CreateTableDesign.R | 18 ++-------- R/CreateTableStatistic.R | 4 +- R/CreateTableStructure.R | 2 - R/CreateTableTest.R | 4 +- R/EffectSizeContStat.R | 2 - R/EffectSizeCoxEventStat.R |only R/EffectSizeEventStat.R | 24 +++++++++++-- R/EffectSizePropStat.R | 2 - R/FixedSeqAdj.R |only R/HazardRatioCoxStat.R |only R/HazardRatioStat.R | 45 ++++++++++++++++--------- R/LogrankTest.R | 26 ++++++++++---- R/PerformAnalysis.R | 2 - R/RatioEffectSizeContStat.R | 2 - R/RatioEffectSizeCoxEventStat.R |only R/RatioEffectSizeEventStat.R | 72 ++++++++-------------------------------- R/RatioEffectSizePropStat.R | 2 - README.md | 2 - man/Mediana-package.Rd | 4 +- man/MultAdjProc.Rd | 1 man/Statistic.Rd | 6 +-- 26 files changed, 154 insertions(+), 153 deletions(-)
Title: Miscellaneous Functions for the USGS INL Project Office
Description: A collection of functions for creating high-level graphics,
performing raster-based analysis, processing MODFLOW-based models, and
overlaying multi-polygon objects. Used to support packages and scripts written
by researchers at the United States Geological Survey (USGS)
Idaho National Laboratory (INL) Project Office.
Author: Jason C. Fisher [aut, cre]
Maintainer: Jason C. Fisher <jfisher@usgs.gov>
Diff between inlmisc versions 0.2.2 dated 2016-10-24 and 0.2.3 dated 2017-02-07
inlmisc-0.2.2/inlmisc/R/AddBubbles.R |only inlmisc-0.2.2/inlmisc/man/AddBubbles.Rd |only inlmisc-0.2.3/inlmisc/DESCRIPTION | 14 inlmisc-0.2.3/inlmisc/LICENSE.note | 2 inlmisc-0.2.3/inlmisc/MD5 | 76 ++-- inlmisc-0.2.3/inlmisc/NAMESPACE | 3 inlmisc-0.2.3/inlmisc/NEWS.md | 40 ++ inlmisc-0.2.3/inlmisc/R/AddColorKey.R | 20 - inlmisc-0.2.3/inlmisc/R/AddPoints.R |only inlmisc-0.2.3/inlmisc/R/AddScaleBar.R | 2 inlmisc-0.2.3/inlmisc/R/BumpRiverStage.R | 4 inlmisc-0.2.3/inlmisc/R/ExportRasterStack.R | 3 inlmisc-0.2.3/inlmisc/R/ExtractAlongTransect.R | 2 inlmisc-0.2.3/inlmisc/R/POSIXct2Character.R |only inlmisc-0.2.3/inlmisc/R/PlotCrossSection.R | 80 ++-- inlmisc-0.2.3/inlmisc/R/PlotGraph.R | 5 inlmisc-0.2.3/inlmisc/R/PlotMap.R | 413 ++++++++++------------ inlmisc-0.2.3/inlmisc/R/ReadModflowBinary.R | 2 inlmisc-0.2.3/inlmisc/R/SummariseBudget.R | 2 inlmisc-0.2.3/inlmisc/R/zzz.R | 4 inlmisc-0.2.3/inlmisc/README.md | 6 inlmisc-0.2.3/inlmisc/inst/CITATION | 15 inlmisc-0.2.3/inlmisc/man/AddColorKey.Rd | 7 inlmisc-0.2.3/inlmisc/man/AddInsetMap.Rd | 7 inlmisc-0.2.3/inlmisc/man/AddPoints.Rd |only inlmisc-0.2.3/inlmisc/man/AddScaleBar.Rd | 7 inlmisc-0.2.3/inlmisc/man/BumpDisconnectCells.Rd | 1 inlmisc-0.2.3/inlmisc/man/BumpRiverStage.Rd | 9 inlmisc-0.2.3/inlmisc/man/ExportRasterStack.Rd | 7 inlmisc-0.2.3/inlmisc/man/ExtractAlongTransect.Rd | 9 inlmisc-0.2.3/inlmisc/man/GetDaysInMonth.Rd | 1 inlmisc-0.2.3/inlmisc/man/POSIXct2Character.Rd |only inlmisc-0.2.3/inlmisc/man/PlotCrossSection.Rd | 17 inlmisc-0.2.3/inlmisc/man/PlotGraph.Rd | 11 inlmisc-0.2.3/inlmisc/man/PlotMap.Rd | 84 ++-- inlmisc-0.2.3/inlmisc/man/ReadCodeChunks.Rd | 7 inlmisc-0.2.3/inlmisc/man/ReadModflowBinary.Rd | 9 inlmisc-0.2.3/inlmisc/man/ReplaceInTemplate.Rd | 7 inlmisc-0.2.3/inlmisc/man/RmSmallCellChunks.Rd | 7 inlmisc-0.2.3/inlmisc/man/SetPolygons.Rd | 7 inlmisc-0.2.3/inlmisc/man/SummariseBudget.Rd | 9 inlmisc-0.2.3/inlmisc/man/ToScientific.Rd | 1 42 files changed, 463 insertions(+), 437 deletions(-)
Title: Applied Statistical Hypothesis Tests
Description: Some hypothesis test functions (sign test, median and other quantile tests, Wilcoxon signed rank test, coefficient of variation test, test of normal variance, test on weighted sums of Poisson) with a focus on non-asymptotic methods that have matching confidence intervals.
Author: Michael P. Fay
Maintainer: Michael P. Fay <mfay@niaid.nih.gov>
Diff between asht versions 0.6 dated 2016-05-11 and 0.8 dated 2017-02-07
DESCRIPTION | 10 ++++----- MD5 | 12 +++++----- R/wsrTest.R | 56 ++++++++++++++++++++++++++++++++++++++++----------- inst/NEWS.Rd | 29 ++++++++++++++++++++++++++ man/asht-package.Rd | 4 +-- man/wspoissonTest.Rd | 5 ++-- man/wsrTest.Rd | 35 +++++++++++++++++++++++++++---- 7 files changed, 120 insertions(+), 31 deletions(-)
Title: Arabic Stemmer for Text Analysis
Description: Allows users to stem Arabic texts for text analysis.
Author: Rich Nielsen
Maintainer: Rich Nielsen <rnielsen@mit.edu>
Diff between arabicStemR versions 1.0 dated 2016-06-04 and 1.2 dated 2017-02-07
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/stemmer.R | 39 +++++++++++++++++++++++++++++++-------- man/removeStopWords.Rd | 8 +++++++- man/stem.Rd | 16 +++++++++++++++- 5 files changed, 61 insertions(+), 18 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-02-05 1.0.0