Title: Friendly R Startup Configuration
Description: Adds support for R startup configuration via '.Renviron.d' and '.Rprofile.d' directories in addition to '.Renviron' and '.Rprofile' files. This makes it possible to keep private / secret environment variables separate from other environment variables. It also makes it easier to share specific startup settings by simply copying a file to a directory.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between startup versions 0.4.0 dated 2016-12-22 and 0.5.0 dated 2017-02-12
DESCRIPTION | 8 +-- MD5 | 32 +++++++------- NEWS | 107 ++++++++++++++++++++++++++++++++++--------------- R/check.R | 17 +++++-- R/filter_files.R | 4 - R/find_files.R | 7 +++ R/is_ess.R |only R/startup.R | 9 ++++ R/sysinfo.R | 1 README.md | 8 ++- man/check.Rd | 1 man/find_rprofile.Rd | 4 - man/find_rprofile_d.Rd | 4 - man/is_ess.Rd |only man/is_rstudio.Rd | 1 man/is_wine.Rd | 1 man/startup.Rd | 7 +-- man/sysinfo.Rd | 1 18 files changed, 142 insertions(+), 70 deletions(-)
Title: 'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
Description: The configuration format defined by 'TOML' (which expands to
"Tom's Obvious Markup Language") specifies an excellent format (described at
<https://github.com/toml-lang/toml>) suitable for both human editing as well
as the common uses of a machine-readable format. This package uses 'Rcpp' to
connect the 'cpptoml' parser written by Chase Geigle (in modern C++11) to R.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppTOML versions 0.1.0 dated 2017-01-05 and 0.1.1 dated 2017-02-12
RcppTOML-0.1.0/RcppTOML/R/sort.R |only RcppTOML-0.1.1/RcppTOML/ChangeLog | 45 + RcppTOML-0.1.1/RcppTOML/DESCRIPTION | 8 RcppTOML-0.1.1/RcppTOML/MD5 | 35 RcppTOML-0.1.1/RcppTOML/R/RcppExports.R | 4 RcppTOML-0.1.1/RcppTOML/R/parseToml.R | 17 RcppTOML-0.1.1/RcppTOML/inst/NEWS.Rd | 18 RcppTOML-0.1.1/RcppTOML/inst/include/cpptoml.h | 768 +++++++++++++----- RcppTOML-0.1.1/RcppTOML/inst/toml/ex2.toml | 5 RcppTOML-0.1.1/RcppTOML/man/parseTOML.Rd | 12 RcppTOML-0.1.1/RcppTOML/src/RcppExports.cpp | 9 RcppTOML-0.1.1/RcppTOML/src/parse.cpp | 56 + RcppTOML-0.1.1/RcppTOML/tests/arrays.Rout.save | 7 RcppTOML-0.1.1/RcppTOML/tests/bool_datetime.Rout.save | 9 RcppTOML-0.1.1/RcppTOML/tests/float.Rout.save | 7 RcppTOML-0.1.1/RcppTOML/tests/integer.Rout.save | 7 RcppTOML-0.1.1/RcppTOML/tests/strings.Rout.save | 7 RcppTOML-0.1.1/RcppTOML/tests/tables.Rout.save | 7 RcppTOML-0.1.1/RcppTOML/tests/tomlExamples.Rout.save | 11 19 files changed, 755 insertions(+), 277 deletions(-)
Title: Function for Generating Random Names and a Dataset
Description: Function for generating random gender and ethnicity correct first and/or last names. Names are chosen proportionally based upon their probability of appearing in a large scale data base of real names.
Author: Damian W. Betebenner <dbetebenner@nciea.org>
Maintainer: Damian W. Betebenner <dbetebenner@nciea.org>
Diff between randomNames versions 0.2-0 dated 2016-09-09 and 0.4-0 dated 2017-02-12
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/randomNames.R | 32 +++++++++++++++++++------------- data/randomNamesData.rda |binary inst/CITATION | 8 ++++---- inst/NEWS | 8 ++++++++ man/randomNames-package.Rd | 4 ++-- man/randomNames.Rd | 27 +++++++++++++++++++++------ 8 files changed, 65 insertions(+), 36 deletions(-)
Title: Pretty Timeline Creation
Description: Create timelines or Gantt charts, offline and interactive, that are usable in the 'RStudio' viewer pane, in 'R Markdown' documents and in 'Shiny' apps using 'plotly.js', a high-level, declarative charting library (see https://plot.ly/javascript/). Hover the mouse pointer over a point or task to show details or drag a rectangle to zoom in. Timelines (and the data behind them) can be manipulated using 'plotly_build()' or, once uploaded to a 'plotly' account, viewed and modified in a web browser.
Author: Sandro Raabe [aut, cre]
Maintainer: Sandro Raabe <shosaco_nospam@hotmail.com>
Diff between vistime versions 0.2.0 dated 2017-01-30 and 0.3.0 dated 2017-02-12
vistime-0.2.0/vistime/data |only vistime-0.2.0/vistime/demo |only vistime-0.2.0/vistime/inst/img/ex1.png |only vistime-0.2.0/vistime/inst/img/ex1data.png |only vistime-0.2.0/vistime/man/school.Rd |only vistime-0.3.0/vistime/DESCRIPTION | 16 +-- vistime-0.3.0/vistime/MD5 | 19 +-- vistime-0.3.0/vistime/NEWS.md | 20 ++- vistime-0.3.0/vistime/R/vistime.R | 152 ++++++++++++++++++----------- vistime-0.3.0/vistime/README.md | 129 +++++++++++++++++++++--- vistime-0.3.0/vistime/inst/img/ex2.png |binary vistime-0.3.0/vistime/inst/img/ex3.png |only vistime-0.3.0/vistime/man/vistime.Rd | 67 +++++++++--- 13 files changed, 292 insertions(+), 111 deletions(-)
Title: R Interface to X-13-ARIMA-SEATS
Description: Easy-to-use interface to X-13-ARIMA-SEATS, the seasonal adjustment
software by the US Census Bureau. It offers full access to almost all
options and outputs of X-13, including X-11 and SEATS, automatic ARIMA model
search, outlier detection and support for user defined holiday variables,
such as Chinese New Year or Indian Diwali. A graphical user interface can be
used through the 'seasonalview' package. Uses the X-13-binaries from the
'x13binary' package.
Author: Christoph Sax
Maintainer: Christoph Sax <christoph.sax@gmail.com>
Diff between seasonal versions 1.5.0 dated 2017-02-12 and 1.5.1 dated 2017-02-12
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NAMESPACE | 1 - NEWS | 8 ++++++++ R/as.data.frame.R | 43 +++++++++++++++++++++---------------------- R/udg.R | 2 +- inst/doc/seas.pdf |binary man/as.data.frame.seas.Rd | 14 +++++--------- 8 files changed, 46 insertions(+), 44 deletions(-)
Title: Reproduce Statistical Analyses and Meta-Analyses
Description: Includes data analysis functions (e.g., to calculate effect sizes and 95% Confidence Intervals (CI) on Standardised Effect Sizes (d) for ABBA cross-over repeated-measures experimental designs), data presentation functions (e.g., density curve overlaid on histogram), and the data sets analyzed in different research papers in software engineering (e.g., related to software defect prediction or multi-site experiment concerning the extent to which structured abstracts were clearer and more complete than conventional abstracts) to streamline reproducible research in software engineering.
Author: Lech Madeyski [cre, aut, ctb],
Marian Jureczko [ctb] (Data contributor),
Barbara Kitchenham [ctb] (Data and code contributor),
David Budgen [ctb] (Data contributor),
Pearl Brereton [ctb] (Data contributor),
Jacky Keung [ctb] (Data contributor),
Stuart Charters [ctb] (Data contributor),
Shirley Gibbs [ctb] (Data contributor),
Amnart Pohthong [ctb] (Data contributor)
Maintainer: Lech Madeyski <lech.madeyski@gmail.com>
Diff between reproducer versions 0.1.7 dated 2017-01-31 and 0.1.8 dated 2017-02-12
DESCRIPTION | 12 MD5 | 33 +- NAMESPACE | 1 NEWS.md | 10 R/MadeyskiKitchenhamMetaAnalysis.R | 280 +++++++++++++--------- R/data.R | 14 - R/reproducer.R | 73 ----- man/Ciolkowski09ESEM.MetaAnalysis.PBRvsCBRorAR.Rd | 2 man/KitchenhamMadeyskiBudgen16.COCOMO.Rd | 2 man/KitchenhamMadeyskiBudgen16.DiffInDiffData.Rd | 2 man/KitchenhamMadeyskiBudgen16.FINNISH.Rd | 2 man/KitchenhamMadeyskiBudgen16.PolishData.Rd | 2 man/KitchenhamMadeyskiBudgen16.PolishSubjects.Rd | 2 man/KitchenhamMadeyskiBudgen16.SubjectData.Rd | 2 man/effectSizeCI.Rd | 2 man/getEffectSizesABBAIgnoringPeriodEffect.Rd | 2 man/getSimulationData.Rd | 1 man/getTheoreticalEffectSizeVariancesABBA.Rd |only 18 files changed, 222 insertions(+), 220 deletions(-)
Title: Elithorn Maze Generator
Description: A maze generator that creates the Elithorn Maze (HTML file) and the functions to calculate the associated maze parameters (i.e. Difficulty and Ability).
Author: Bao Sheng Loe (Aiden) [aut,cre,cph],
Maria Sanchez[ctb]
Maintainer: Bao Sheng Loe (Aiden) <bsl28@cam.ac.uk>
Diff between mazeGen versions 0.1.0 dated 2017-01-05 and 0.1.1 dated 2017-02-12
DESCRIPTION | 8 MD5 | 20 - NEWS.md | 11 R/jsTimer.R | 600 ++++++++++++++++++++++++++++++++++++++++++++++++++++- R/mazeAbility.R | 4 R/mazeDiff.R | 2 R/mazeHTML.R | 32 ++ R/mazeObject.R | 21 + man/mazeAbility.Rd | 4 man/mazeHTML.Rd | 6 man/mazeObject.Rd | 6 11 files changed, 676 insertions(+), 38 deletions(-)
Title: The Generalized DINA Model Framework
Description: A set of psychometric tools for cognitive diagnostic analyses
for both dichotomous and polytomous responses. Various cognitive diagnosis
models can be estimated, include the generalized deterministic inputs, noisy
and gate (G-DINA) model by de la Torre (2011) <DOI:10.1007/s11336-011-9207-7>,
the sequential G-DINA model by Ma and de la Torre (2016) <DOI:10.1111/bmsp.12070>,
and many other models they subsume. Joint attribute distribution can
be saturated, higher-order or structured. Q-matrix validation, item and model
fit statistics, model comparison at test and item level and differential item
functioning can also be conducted. A graphical user interface is also provided.
Author: Wenchao Ma [aut, cre],
Jimmy de la Torre [aut]
Maintainer: Wenchao Ma <wenchao.ma@rutgers.edu>
Diff between GDINA versions 1.2.0 dated 2017-01-28 and 1.2.1 dated 2017-02-12
DESCRIPTION | 16 +- MD5 | 96 +++++++------- NEWS.md | 12 + R/GDINA.R | 259 +++++++++++++++++++++------------------ R/dif.R | 11 - R/extract.GDINA.R | 6 R/internalExtract.R | 2 R/plotPVAF.Qval.R | 8 - R/print.GDINA.R | 1 R/simGDINA.R | 71 +++++----- R/summary.GDINA.R | 7 - man/ClassRate.Rd | 1 man/GDINA-package.Rd | 7 - man/GDINA.Rd | 200 +++++++++++++++++------------- man/Qval.Rd | 8 - man/att.structure.Rd | 7 - man/attributepattern.Rd | 1 man/autoGDINA.Rd | 23 +-- man/bdiagMatrix.Rd | 1 man/cjoint.Rd | 1 man/designmatrix.Rd | 1 man/dif.Rd | 31 ++-- man/ecpe.Rd | 1 man/extract.Rd | 6 man/frac20.Rd | 1 man/heatplot.Rd | 1 man/hoparm.Rd | 1 man/indlogLik.Rd | 1 man/indlogPost.Rd | 1 man/itemfit.Rd | 13 + man/itemparm.Rd | 1 man/mesaplot.Rd | 1 man/modelcomp.Rd | 15 +- man/monocheck.Rd | 1 man/npar.Rd | 1 man/personparm.Rd | 7 - man/plotIRF.Rd | 1 man/rowCount.Rd | 1 man/rowMatch.Rd | 1 man/sim10GDINA.Rd | 1 man/sim20seqGDINA.Rd | 1 man/sim21seqDINA.Rd | 1 man/sim30DINA.Rd | 1 man/sim30GDINA.Rd | 1 man/sim30pGDINA.Rd | 1 man/simGDINA.Rd | 78 ++++++----- man/startGDINA.Rd | 1 man/unique_only.Rd | 1 tests/testthat/test-likelihood.R | 2 49 files changed, 484 insertions(+), 428 deletions(-)
Title: Full Interactive GUI for Dynamic Biplot in R
Description: A GUI to solve dynamic biplots and classical biplot. Try matrices
of 2-way and 3-way. The GUI can be run in multiple languages.
Author: Jaime Egido [aut, cre]
Maintainer: Jaime Egido <jegido@usal.es>
Diff between dynBiplotGUI versions 1.1.4 dated 2017-01-17 and 1.1.5 dated 2017-02-12
ChangeLog | 15 ++++ DESCRIPTION | 8 +- MD5 | 16 ++--- R/dynBiplot.R | 134 +++++++++++++++++++++++++++----------------- inst/lang/Language.csv | 4 + man/dynBiplot.Rd | 2 man/dynBiplotGUI-package.Rd | 2 man/panelData_en.Rd | 5 - man/panelData_es.Rd | 5 - 9 files changed, 118 insertions(+), 73 deletions(-)
Title: Automatic Item Generator
Description: A collection of Automatic Item Generators used mainly for psychological research. This package can generate linear syllogistic reasoning items and arithmetic items. It is recommended for research purpose only.
Author: Bao Sheng Loe (Aiden)
Maintainer: Bao Sheng Loe (Aiden) <bsl28@cam.ac.uk>
Diff between AIG versions 0.1.0 dated 2016-12-19 and 0.1.1 dated 2017-02-12
DESCRIPTION | 14 - MD5 | 17 - NAMESPACE | 3 R/AIG.R | 9 R/ARMadd.R |only R/classes.R |only R/lisy.R | 772 +++++++++++++++++++++++++++++++++++++++-------------------- README.md | 11 man/AIG.Rd | 12 man/arith.Rd |only man/lisy.Rd | 55 ++-- 11 files changed, 595 insertions(+), 298 deletions(-)
Title: Data Sets from "Forecasting: Methods and Applications" by
Makridakis, Wheelwright & Hyndman (1998)
Description: All data sets from "Forecasting: methods and applications" by
Makridakis, Wheelwright & Hyndman (Wiley, 3rd ed., 1998).
Author: Rob J Hyndman <Rob.Hyndman@monash.edu>
Maintainer: Rob J Hyndman <Rob.Hyndman@monash.edu>
Diff between fma versions 2.2 dated 2016-06-05 and 2.3 dated 2017-02-12
ChangeLog | 7 +- DESCRIPTION | 10 +-- MD5 | 136 +++++++++++++++++++++++++-------------------------- data/advert.rda |binary data/advsales.rda |binary data/airpass.rda |binary data/beer.rda |binary data/bicoal.rda |binary data/bricksq.rda |binary data/canadian.rda |binary data/chicken.rda |binary data/condmilk.rda |binary data/copper.rda |binary data/copper1.rda |binary data/copper2.rda |binary data/copper3.rda |binary data/cowtemp.rda |binary data/cpimel.rda |binary data/dj.rda |binary data/dole.rda |binary data/dowjones.rda |binary data/eggs.rda |binary data/eknives.rda |binary data/elco.rda |binary data/elec.rda |binary data/expenditure.rda |binary data/fancy.rda |binary data/french.rda |binary data/housing.rda |binary data/hsales.rda |binary data/hsales2.rda |binary data/huron.rda |binary data/ibmclose.rda |binary data/input.rda |binary data/internet.rda |binary data/invent15.rda |binary data/jcars.rda |binary data/labour.rda |binary data/lynx.rda |binary data/milk.rda |binary data/mink.rda |binary data/motion.rda |binary data/nail.rda |binary data/oilprice.rda |binary data/paris.rda |binary data/petrol.rda |binary data/pigs.rda |binary data/plastics.rda |binary data/pollution.rda |binary data/productC.rda |binary data/qelec.rda |binary data/qsales.rda |binary data/sales.rda |binary data/schizo.rda |binary data/shampoo.rda |binary data/sheep.rda |binary data/ship.rda |binary data/shipex.rda |binary data/strikes.rda |binary data/telephone.rda |binary data/ukdeaths.rda |binary data/usdeaths.rda |binary data/uselec.rda |binary data/ustreas.rda |binary data/wagesuk.rda |binary data/wheat.rda |binary data/wn.rda |binary data/wnoise.rda |binary data/writing.rda |binary 69 files changed, 78 insertions(+), 75 deletions(-)
Title: Time Series Clustering Along with Optimizations for the Dynamic
Time Warping Distance
Description: Time series clustering along with optimized techniques related
to the Dynamic Time Warping distance and its corresponding lower bounds.
Implementations of partitional, hierarchical, fuzzy, k-Shape and TADPole
clustering are available. Functionality can be easily extended with
custom distance measures and centroid definitions.
Author: Alexis Sarda-Espinosa
Maintainer: Alexis Sarda <alexis.sarda@gmail.com>
Diff between dtwclust versions 3.1.0 dated 2017-01-08 and 3.1.1 dated 2017-02-12
DESCRIPTION | 22 - MD5 | 120 +++-- NAMESPACE | 23 + R/TADPole.R | 641 +++++++++++++++--------------- R/all-cent.R | 549 +++++++++++++------------- R/all-cent2.R |only R/compute-envelop.R | 9 R/cvi.R | 330 +++++++-------- R/ddist.R | 21 - R/ddist2.R |only R/dtw-lb.R | 469 +++++++++++----------- R/dtwclust-classes.R | 3 R/dtwclust.R | 178 ++++---- R/partitional.R | 154 +++++++ R/pkg.R | 362 ++++++++--------- R/tsclust-classes.R |only R/tsclust-controls.R |only R/tsclust-methods.R |only R/tsclust.R |only R/utils.R | 4 inst/NEWS.Rd | 11 inst/doc/dtwclust.pdf |binary inst/tsclust-examples.R |only man/DBA.Rd | 2 man/GAK.Rd | 1 man/NCCc.Rd | 1 man/SBD.Rd | 1 man/TADPole.Rd | 5 man/TSClusters-class.Rd |only man/as.matrix.Rd | 1 man/clusterSim.Rd | 1 man/compute_envelop.Rd | 11 man/create_dtwclust.Rd | 1 man/cvi.Rd | 21 - man/dtw2.Rd | 1 man/dtw_basic.Rd | 1 man/dtw_lb.Rd | 8 man/dtwclust-class.Rd | 3 man/dtwclust-methods.Rd | 20 man/dtwclust-package.Rd | 17 man/dtwclust.Rd | 14 man/dtwclustControl-class.Rd | 3 man/dtwclustFamily-class.Rd | 4 man/lb_improved.Rd | 1 man/lb_keogh.Rd | 1 man/randIndex.Rd | 9 man/reinterpolate.Rd | 1 man/shape_extraction.Rd | 1 man/tsclust-controls.Rd |only man/tsclust.Rd |only man/tsclustFamily-class.Rd |only man/tsclusters-methods.Rd |only man/uciCT.Rd | 5 man/zscore.Rd | 1 tests/testthat.R | 27 - tests/testthat/helper-all.R | 82 ++- tests/testthat/integration/custom-dist.R | 145 +++--- tests/testthat/integration/families.R | 403 +++++++++++++++++-- tests/testthat/system/data-formats.R | 124 +++-- tests/testthat/system/fuzzy.R | 40 + tests/testthat/system/hierarchical.R | 206 ++++++--- tests/testthat/system/invalid-inputs.R | 168 +++++++- tests/testthat/system/partitional.R | 486 ++++++++++++++--------- tests/testthat/system/preproc.R | 139 ++++-- tests/testthat/unit/centroids.R | 650 ++++++++++++++++++------------- tests/testthat/unit/cvis.R | 214 +++++----- tests/testthat/unit/methods.R | 170 +++++--- 67 files changed, 3501 insertions(+), 2384 deletions(-)
Title: Synthetic Microdata and Spatial MicroSimulation Modeling for ACS
Data
Description: Firstly provides a wrapper to library(acs) to access curated set
of American Community Survey (ACS) base tables which may be of interest
to many researchers. Secondly, it builds synthetic micro-datasets of ACS data
at any specified geographic level with 10 default individual attributes. Thirdly,
provides functionality for data-extensibility of micro-datasets; allowing users
to both add data attributes and marginalize undesired attributes. And
finally, the package also conducts spatial microsimulation modeling (SMSM)
via simulated annealing. SMSM is conducted in parallel by default.
Author: Alex Whitworth [aut, cre]
Maintainer: Alex Whitworth <whitworth.alex@gmail.com>
Diff between synthACS versions 1.0.0 dated 2016-09-14 and 1.0.1 dated 2017-02-12
synthACS-1.0.0/synthACS/tests/testthat/build_test_dat1.R |only synthACS-1.0.1/synthACS/DESCRIPTION | 6 - synthACS-1.0.1/synthACS/MD5 | 39 ++++------ synthACS-1.0.1/synthACS/R/synth_inc.R | 8 +- synthACS-1.0.1/synthACS/README.md | 24 +++--- synthACS-1.0.1/synthACS/tests/testthat/test-class_macroACS_methods.R | 12 +-- synthACS-1.0.1/synthACS/tests/testthat/test-class_synthACS_methods.R | 18 ++-- synthACS-1.0.1/synthACS/tests/testthat/test-combine_smsm.R | 4 - synthACS-1.0.1/synthACS/tests/testthat/test-derive_synthetic.R | 6 - synthACS-1.0.1/synthACS/tests/testthat/test-sim_anneal.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-sim_anneal_parallel.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_age_gender.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_edu.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_emp.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_geog_mob.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_inc.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_mar_status.R | 4 - synthACS-1.0.1/synthACS/tests/testthat/test-synth_nativ.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_new_attr.R | 8 +- synthACS-1.0.1/synthACS/tests/testthat/test-synth_pov.R | 2 synthACS-1.0.1/synthACS/tests/testthat/test-synth_race.R | 2 21 files changed, 74 insertions(+), 75 deletions(-)
Title: R Interface to X-13-ARIMA-SEATS
Description: Easy-to-use interface to X-13-ARIMA-SEATS, the seasonal adjustment
software by the US Census Bureau. It offers full access to almost all
options and outputs of X-13, including X-11 and SEATS, automatic ARIMA model
search, outlier detection and support for user defined holiday variables,
such as Chinese New Year or Indian Diwali. A graphical user interface can be
used through the 'seasonalview' package. Uses the X-13-binaries from the
'x13binary' package.
Author: Christoph Sax
Maintainer: Christoph Sax <christoph.sax@gmail.com>
Diff between seasonal versions 1.4.0 dated 2016-12-23 and 1.5.0 dated 2017-02-12
seasonal-1.4.0/seasonal/R/deprecated.R |only seasonal-1.4.0/seasonal/R/inspect-sub.R |only seasonal-1.4.0/seasonal/inst/inspect |only seasonal-1.4.0/seasonal/man/seasonal-deprecated.Rd |only seasonal-1.5.0/seasonal/DESCRIPTION | 10 +- seasonal-1.5.0/seasonal/MD5 | 81 ++++++++++----------- seasonal-1.5.0/seasonal/NAMESPACE | 3 seasonal-1.5.0/seasonal/NEWS | 14 +++ seasonal-1.5.0/seasonal/R/as.data.frame.R |only seasonal-1.5.0/seasonal/R/defunct.R | 43 ++++++++--- seasonal-1.5.0/seasonal/R/summary.R | 13 --- seasonal-1.5.0/seasonal/R/udg.R | 22 ----- seasonal-1.5.0/seasonal/README.md | 2 seasonal-1.5.0/seasonal/inst/doc/seas.pdf |binary seasonal-1.5.0/seasonal/man/SPECS.Rd | 3 seasonal-1.5.0/seasonal/man/as.data.frame.seas.Rd |only seasonal-1.5.0/seasonal/man/checkX13.Rd | 1 seasonal-1.5.0/seasonal/man/cpi.Rd | 1 seasonal-1.5.0/seasonal/man/easter.Rd | 3 seasonal-1.5.0/seasonal/man/exp.Rd | 1 seasonal-1.5.0/seasonal/man/final.Rd | 5 - seasonal-1.5.0/seasonal/man/fivebestmdl.Rd | 1 seasonal-1.5.0/seasonal/man/genhol.Rd | 1 seasonal-1.5.0/seasonal/man/identify.seas.Rd | 1 seasonal-1.5.0/seasonal/man/iip.Rd | 1 seasonal-1.5.0/seasonal/man/import.spc.Rd | 1 seasonal-1.5.0/seasonal/man/import.ts.Rd | 1 seasonal-1.5.0/seasonal/man/na.x13.Rd | 1 seasonal-1.5.0/seasonal/man/out.Rd | 1 seasonal-1.5.0/seasonal/man/outlier.Rd | 1 seasonal-1.5.0/seasonal/man/plot.seas.Rd | 7 - seasonal-1.5.0/seasonal/man/predict.seas.Rd | 1 seasonal-1.5.0/seasonal/man/seas.Rd | 1 seasonal-1.5.0/seasonal/man/seasonal-defunct.Rd | 26 ++++++ seasonal-1.5.0/seasonal/man/seasonal-package.Rd | 10 +- seasonal-1.5.0/seasonal/man/series.Rd | 1 seasonal-1.5.0/seasonal/man/spc.Rd | 1 seasonal-1.5.0/seasonal/man/static.Rd | 1 seasonal-1.5.0/seasonal/man/summary.seas.Rd | 11 -- seasonal-1.5.0/seasonal/man/transformfunction.Rd | 1 seasonal-1.5.0/seasonal/man/udg.Rd | 15 +-- seasonal-1.5.0/seasonal/man/unemp.Rd | 1 seasonal-1.5.0/seasonal/man/update.seas.Rd | 1 seasonal-1.5.0/seasonal/man/view.Rd | 1 44 files changed, 140 insertions(+), 149 deletions(-)
Title: Bayesian Structure Learning in Graphical Models using
Birth-Death MCMC
Description: Provides statistical tools for Bayesian structure learning in undirected graphical models with both continuous and discrete variables.
Author: Abdolreza Mohammadi and Ernst Wit
Maintainer: Abdolreza Mohammadi <a.mohammadi@rug.nl>
Diff between BDgraph versions 2.32 dated 2017-01-09 and 2.33 dated 2017-02-12
DESCRIPTION | 10 ++++----- MD5 | 11 +++++----- inst |only src/gcgm_DMH.cpp | 52 ++++++++++++++++----------------------------------- src/gcgm_bd.cpp | 2 - src/ggm_DMH.cpp | 56 ++++++++++++++++++------------------------------------- src/ggm_bd.cpp | 11 +++++----- 7 files changed, 54 insertions(+), 88 deletions(-)
Title: Purge Training Data from Models
Description: Enables the removal of training data from fitted R models while
retaining predict functionality. The purged models are more portable as their
memory footprints do not scale with the training sample size.
Author: Marc Maier [cre],
Chaoqun Jia [ctb],
MassMutual Advanced Analytics [aut] (http://datascience.massmutual.com)
Maintainer: Marc Maier <mmaier@massmutual.com>
Diff between purge versions 0.2.0 dated 2015-10-28 and 0.2.1 dated 2017-02-12
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- NAMESPACE | 2 +- R/purge.R | 1 + man/purge.Rd | 3 +-- tests/testthat/test.purge.R | 30 ++++++++++++++++++++---------- 6 files changed, 33 insertions(+), 23 deletions(-)
Title: Nonlinear Nonparametric Statistics
Description: Nonlinear nonparametric statistics using partial moments. Partial moments are the elements of variance and asymptotically approximate the area of f(x). These robust statistics provide the basis for nonlinear analysis while retaining linear equivalences. NNS offers: Numerical integration, Numerical differentiation, Clustering, Correlation, Dependence, Causal analysis, ANOVA, Regression, Classification, Seasonality, Autoregressive modelling, Normalization and Stochastic dominance. All routines based on: Viole, F. and Nawrocki, D. (2013), Nonlinear Nonparametric Statistics: Using Partial Moments (ISBN: 1490523995).
Author: Fred Viole
Maintainer: Fred Viole <viole.nawrocki@gmail.com>
Diff between NNS versions 0.2.5 dated 2017-01-10 and 0.2.6 dated 2017-02-12
NNS-0.2.5/NNS/man/Co.PM.cor.Rd |only NNS-0.2.5/NNS/man/FSD.Rd |only NNS-0.2.5/NNS/man/TSD.Rd |only NNS-0.2.5/NNS/man/findInterval2.Rd |only NNS-0.2.5/NNS/man/partition.map.Rd |only NNS-0.2.6/NNS/DESCRIPTION | 11 NNS-0.2.6/NNS/MD5 | 126 ++++---- NNS-0.2.6/NNS/NAMESPACE | 12 NNS-0.2.6/NNS/R/ANOVA.R | 79 ++--- NNS-0.2.6/NNS/R/ARMA.R | 319 ++++++++++----------- NNS-0.2.6/NNS/R/Binary_ANOVA.R | 25 + NNS-0.2.6/NNS/R/Causation.R | 128 -------- NNS-0.2.6/NNS/R/Co_PM_cor.R | 62 +++- NNS-0.2.6/NNS/R/Correlation.R | 11 NNS-0.2.6/NNS/R/Dependence.R | 81 +++-- NNS-0.2.6/NNS/R/Dependence_matrix.R |only NNS-0.2.6/NNS/R/FSD.R | 1 NNS-0.2.6/NNS/R/Feature_probability.R | 146 ++++----- NNS-0.2.6/NNS/R/Find_Interval.R | 11 NNS-0.2.6/NNS/R/Multivariate_Regression.R | 82 ++--- NNS-0.2.6/NNS/R/NNS_term_matrix.R | 1 NNS-0.2.6/NNS/R/Normalization.R | 44 +- NNS-0.2.6/NNS/R/Numerical_Differentiation.R | 2 NNS-0.2.6/NNS/R/Partial_Moments.R | 98 +++--- NNS-0.2.6/NNS/R/Partition_Map.R | 161 ++++++---- NNS-0.2.6/NNS/R/Regression.R | 416 +++++++--------------------- NNS-0.2.6/NNS/R/SD_Efficient_Set.R | 15 - NNS-0.2.6/NNS/R/SSD.R | 1 NNS-0.2.6/NNS/R/Seasonality_Test.R | 34 +- NNS-0.2.6/NNS/R/Stack.R | 17 - NNS-0.2.6/NNS/R/Stack_intermediate.R | 51 ++- NNS-0.2.6/NNS/R/TSD.R | 1 NNS-0.2.6/NNS/R/Uni_Causation.R |only NNS-0.2.6/NNS/R/Uni_SD_Routines.R | 15 - NNS-0.2.6/NNS/R/dy_d_wrt.R | 14 NNS-0.2.6/NNS/R/dy_dx.R | 65 ++-- NNS-0.2.6/NNS/man/Co.LPM.Rd | 17 - NNS-0.2.6/NNS/man/Co.UPM.Rd | 17 - NNS-0.2.6/NNS/man/D.LPM.Rd | 17 - NNS-0.2.6/NNS/man/D.UPM.Rd | 17 - NNS-0.2.6/NNS/man/LPM.Rd | 4 NNS-0.2.6/NNS/man/LPM.VaR.Rd | 3 NNS-0.2.6/NNS/man/NNS.ANOVA.Rd | 3 NNS-0.2.6/NNS/man/NNS.ANOVA.bin.Rd | 7 NNS-0.2.6/NNS/man/NNS.ARMA.Rd | 17 - NNS-0.2.6/NNS/man/NNS.FSD.Rd | 2 NNS-0.2.6/NNS/man/NNS.FSD.uni.Rd |only NNS-0.2.6/NNS/man/NNS.M.reg.Rd | 13 NNS-0.2.6/NNS/man/NNS.SD.Efficient.Set.Rd | 2 NNS-0.2.6/NNS/man/NNS.SSD.Rd | 2 NNS-0.2.6/NNS/man/NNS.SSD.uni.Rd | 2 NNS-0.2.6/NNS/man/NNS.TSD.Rd | 2 NNS-0.2.6/NNS/man/NNS.TSD.uni.Rd |only NNS-0.2.6/NNS/man/NNS.cor.Rd | 4 NNS-0.2.6/NNS/man/NNS.cor.hd.Rd |only NNS-0.2.6/NNS/man/NNS.dep.Rd | 11 NNS-0.2.6/NNS/man/NNS.dep.matrix.Rd |only NNS-0.2.6/NNS/man/NNS.diff.Rd | 3 NNS-0.2.6/NNS/man/NNS.norm.Rd | 5 NNS-0.2.6/NNS/man/NNS.part.Rd |only NNS-0.2.6/NNS/man/NNS.reg.Rd | 23 - NNS-0.2.6/NNS/man/NNS.seas.Rd | 1 NNS-0.2.6/NNS/man/NNS.stack.Rd | 16 - NNS-0.2.6/NNS/man/NNS.stack.intermediate.Rd | 7 NNS-0.2.6/NNS/man/NNS.term.matrix.Rd | 3 NNS-0.2.6/NNS/man/UPM.Rd | 4 NNS-0.2.6/NNS/man/UPM.VaR.Rd | 3 NNS-0.2.6/NNS/man/Uni.caus.Rd | 9 NNS-0.2.6/NNS/man/dy.d_.Rd | 17 - NNS-0.2.6/NNS/man/dy.dx.Rd | 21 - 70 files changed, 1081 insertions(+), 1200 deletions(-)
Title: Simulating and Analyzing Time to Event Data in the Presence of
Population Mortality
Description: Implements two methods: a nonparametric risk adjustment and a
data imputation method that use general population mortality tables to allow a
correct analysis of time to disease recurrence. Also includes a powerful set of
object oriented survival data simulation functions.
Author: Tomaz Stupnik [aut, cre],
Maja Pohar Perme [ctb]
Maintainer: Tomaz Stupnik <tomaz.stupnik@guest.arnes.si>
Diff between missDeaths versions 2.0 dated 2017-02-05 and 2.1 dated 2017-02-12
missDeaths-2.0/missDeaths/src/mysurv.cpp |only missDeaths-2.0/missDeaths/src/simulate.cpp |only missDeaths-2.1/missDeaths/DESCRIPTION | 8 +- missDeaths-2.1/missDeaths/MD5 | 23 +++----- missDeaths-2.1/missDeaths/NAMESPACE | 1 missDeaths-2.1/missDeaths/R/library.R | 42 +++++++++++++- missDeaths-2.1/missDeaths/R/package.R | 2 missDeaths-2.1/missDeaths/man/md.simparams.Rd | 2 missDeaths-2.1/missDeaths/man/md.simulate.Rd | 4 - missDeaths-2.1/missDeaths/man/md.value.Rd |only missDeaths-2.1/missDeaths/src/RcppExports.cpp | 58 -------------------- missDeaths-2.1/missDeaths/src/simcensor.cpp | 2 missDeaths-2.1/missDeaths/src/survexpcache.cpp | 71 ++++--------------------- missDeaths-2.1/missDeaths/src/survexpcache.h | 2 14 files changed, 71 insertions(+), 144 deletions(-)
Title: Imputation Methods for Multivariate Multinomial Data
Description: Implements imputation methods using EM and Data Augmentation for
multinomial data following the work of Schafer 1997 <ISBN: 978-0-412-04061-0>.
Author: Alex Whitworth [aut, cre]
Maintainer: Alex Whitworth <whitworth.alex@gmail.com>
Diff between imputeMulti versions 0.6.3 dated 2016-08-11 and 0.6.4 dated 2017-02-12
DESCRIPTION | 6 - MD5 | 10 +- R/RcppExports.R | 30 +++---- data/tract2221.rda |binary src/RcppExports.cpp | 26 +++--- tests/testthat/test-impute_observations.R | 122 +++++++++++++++--------------- 6 files changed, 97 insertions(+), 97 deletions(-)