Title: Model-Based Clustering and Classification with the Multivariate
Contaminated Normal Distribution
Description: Fits mixtures of multivariate contaminated normal distributions
(with eigen-decomposed scale matrices) via the expectation conditional-
maximization algorithm under a clustering or classification paradigm.
Author: Antonio Punzo, Angelo Mazza, Paul D. McNicholas
Maintainer: Angelo Mazza <a.mazza@unict.it>
Diff between ContaminatedMixt versions 1.0 dated 2015-12-20 and 1.1 dated 2017-02-14
DESCRIPTION | 12 MD5 | 51 ++- NAMESPACE | 19 - R/CNmixt.R | 581 ++++++++++------------------------------ R/CNmixt2.R | 127 +++----- R/Extractors.R | 57 ++- R/agree.R | 25 - R/cdm.R | 508 ---------------------------------- R/dCN.R | 28 + R/initialization.R |only R/m.step.R |only R/main.R |only R/pairs.ContaminatedMixt.R | 4 R/plot.ContaminatedMixt.R | 43 ++ R/predict.R |only R/print.ContaminatedMixt.R | 8 R/print.ContaminatedMixtCV.R |only R/summary.ContaminatedMixt.R | 19 - man/CNmixt.Rd | 99 ++---- man/ContaminatedMixt-package.Rd | 8 man/agree.Rd | 2 man/dCN.Rd | 4 man/extractors.Rd | 19 - man/m.step.Rd |only man/predictg.Rd |only man/wine.Rd | 2 src |only 27 files changed, 443 insertions(+), 1173 deletions(-)
More information about ContaminatedMixt at CRAN
Permanent link
Title: Analyses of Phylogenetics and Evolution
Description: Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
Author: Emmanuel Paradis [aut, cre, cph],
Simon Blomberg [aut, cph],
Ben Bolker [aut, cph],
Julien Claude [aut, cph],
Hoa Sien Cuong [aut, cph],
Richard Desper [aut, cph],
Gilles Didier [aut, cph],
Benoit Durand [aut, cph],
Julien Dutheil [aut, cph],
RJ Ewing [aut, cph],
Olivier Gascuel [aut, cph],
Christoph Heibl [aut, cph],
Anthony Ives [aut, cph],
Bradley Jones [aut, cph],
Daniel Lawson [aut, cph],
Vincent Lefort [aut, cph],
Pierre Legendre [aut, cph],
Jim Lemon [aut, cph],
Rosemary McCloskey [aut, cph],
Johan Nylander [aut, cph],
Rainer Opgen-Rhein [aut, cph],
Andrei-Alin Popescu [aut, cph],
Manuela Royer-Carenzi [aut, cph],
Klaus Schliep [aut, cph],
Korbinian Strimmer [aut, cph],
Damien de Vienne [aut, cph]
Maintainer: Emmanuel Paradis <Emmanuel.Paradis@ird.fr>
Diff between ape versions 4.0 dated 2016-12-01 and 4.1 dated 2017-02-14
DESCRIPTION | 12 +- MD5 | 40 ++++---- NAMESPACE | 2 R/DNA.R | 47 +++++----- R/apetools.R |only R/chronos.R | 7 - R/drop.tip.R | 83 +++++------------- R/multi2di.R | 6 - R/nj.R | 6 - R/node.dating.R | 232 ++++++++++++++++++++++++++++++--------------------- R/read.GenBank.R | 11 +- R/read.dna.R | 49 +++++++++- R/read.nexus.R | 8 - inst/doc/MoranI.pdf |binary man/apetools.Rd |only man/as.bitsplits.Rd | 2 man/c.phylo.Rd | 2 man/is.compatible.Rd | 1 man/node.dating.Rd | 15 ++- man/read.dna.Rd | 111 ++++++++++++++++++------ man/read.nexus.Rd | 10 +- src/read_dna.c | 11 +- 22 files changed, 394 insertions(+), 261 deletions(-)
Title: Tools for Analyzing Factorial Experiments
Description: Offers a helping hand to psychologists and other behavioral scientists who routinely deal with experimental data from factorial experiments. It includes several functions to format output from other R functions according to the style guidelines of the APA (American Psychological Association). This formatted output can be copied directly into manuscripts to facilitate data reporting. These features are backed up by a toolkit of several small helper functions, e.g., offering out-of-the-box outlier removal. The package lends its name to Georg "Schorsch" Schuessler, ingenious technician at the Department of Psychology III, University of Wuerzburg.
Author: Roland Pfister, Markus Janczyk
Maintainer: Roland Pfister <roland.pfister@psychologie.uni-wuerzburg.de>
Diff between schoRsch versions 1.3 dated 2016-09-14 and 1.4 dated 2017-02-14
DESCRIPTION | 11 +++++------ MD5 | 6 +++--- R/cor_out.R | 15 ++++++++++++--- man/schoRsch.Rd | 9 +++++---- 4 files changed, 25 insertions(+), 16 deletions(-)
Title: Scatterpie Plot
Description: Creates scatterpie plots, especially useful for plotting pies on a map.
Author: Guangchuang Yu [aut, cre]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between scatterpie versions 0.0.5 dated 2016-12-02 and 0.0.6 dated 2017-02-14
DESCRIPTION | 8 ++++---- MD5 | 17 +++++++++-------- NEWS | 5 +++++ R/geom_scatterpie.R | 1 + R/geom_scatterpie_legend.R | 4 ++-- README.md |only inst/doc/scatterpie.html | 26 +++++++++++++------------- man/geom_scatterpie.Rd | 1 - man/geom_scatterpie_legend.Rd | 1 - man/recenter.Rd | 1 - 10 files changed, 34 insertions(+), 30 deletions(-)
Title: R Interface to the 'Deutsche Nationalbibliothek (German National
Library) API'
Description: A wrapper for the 'Deutsche Nationalbibliothek (German National
Library) API', available at <http://www.dnb.de>. The German National Library is
the German central archival library, collecting, archiving, bibliographically
classifying all German and German-language publications, foreign
publications about Germany, translations of German works, and the works of
German-speaking emigrants published abroad between 1933 and 1945. A personal
access token is required for usage.
Author: c(
person("Christian", "Graul", email = "christian.graul@gmail.com",
role = c("aut", "cre"))
)
Maintainer: Christian Graul <christian.graul@gmail.com>
Diff between rdnb versions 0.1-0 dated 2016-03-31 and 0.1-1 dated 2017-02-14
rdnb-0.1-0/rdnb/vignettes/rdnb_vignette.html |only rdnb-0.1-1/rdnb/DESCRIPTION | 30 +- rdnb-0.1-1/rdnb/MD5 | 32 +- rdnb-0.1-1/rdnb/NAMESPACE | 4 rdnb-0.1-1/rdnb/R/gets.R | 91 ++++++-- rdnb-0.1-1/rdnb/R/rdnb.R | 2 rdnb-0.1-1/rdnb/R/utils.R | 112 ++++++++++ rdnb-0.1-1/rdnb/build |only rdnb-0.1-1/rdnb/inst/CITATION | 4 rdnb-0.1-1/rdnb/inst/NEWS | 18 + rdnb-0.1-1/rdnb/inst/doc/rdnb_vignette.Rmd | 152 +++++++++----- rdnb-0.1-1/rdnb/inst/doc/rdnb_vignette.html | 290 ++++++++++++--------------- rdnb-0.1-1/rdnb/man/changes.Rd | 2 rdnb-0.1-1/rdnb/man/dnb_advanced.Rd | 47 +++- rdnb-0.1-1/rdnb/man/dnb_search.Rd | 10 rdnb-0.1-1/rdnb/man/n_rec.Rd |only rdnb-0.1-1/rdnb/man/print_query.Rd |only rdnb-0.1-1/rdnb/man/rdnb.Rd | 4 rdnb-0.1-1/rdnb/vignettes/rdnb_vignette.Rmd | 152 +++++++++----- 19 files changed, 628 insertions(+), 322 deletions(-)
Title: Toolset for Corpus Analysis
Description: Tools for corpus analysis using the CWB as an efficient backend.
The package offers basic functionality to flexibly create subcorpora and to
carry out and basic statistical operations. Beyond that, it is intended to
serve as an interface to packages implementing advanced statistical
procedures.
Author: Andreas Blaette
Maintainer: Andreas Blaette <andreas.blaette@uni-due.de>
Diff between polmineR versions 0.6.2 dated 2016-09-07 and 0.7.0 dated 2017-02-14
polmineR-0.6.2/polmineR/R/contextBundle_methods.R |only polmineR-0.6.2/polmineR/R/getTermFrequencies_method.R |only polmineR-0.6.2/polmineR/inst/rstudio |only polmineR-0.6.2/polmineR/inst/shiny |only polmineR-0.6.2/polmineR/man/getTermFrequencies-method.Rd |only polmineR-0.7.0/polmineR/DESCRIPTION | 53 +- polmineR-0.7.0/polmineR/MD5 | 173 +++++---- polmineR-0.7.0/polmineR/NAMESPACE | 30 - polmineR-0.7.0/polmineR/NEWS | 10 polmineR-0.7.0/polmineR/R/CQI.rcqp.R | 46 +- polmineR-0.7.0/polmineR/R/Corpus_class.R |only polmineR-0.7.0/polmineR/R/Partition.R |only polmineR-0.7.0/polmineR/R/Regions_class.R |only polmineR-0.7.0/polmineR/R/Textstat.R |only polmineR-0.7.0/polmineR/R/TokenStream_class.R |only polmineR-0.7.0/polmineR/R/aggregate_method.R |only polmineR-0.7.0/polmineR/R/as.DocumentTermMatrix_method.R | 138 ++----- polmineR-0.7.0/polmineR/R/as.markdown_method.R | 270 +++++++++------ polmineR-0.7.0/polmineR/R/as.sparseMatrix_method.R | 35 + polmineR-0.7.0/polmineR/R/as.speeches_method.R | 2 polmineR-0.7.0/polmineR/R/blapply_method.R | 2 polmineR-0.7.0/polmineR/R/compare_method.R | 20 - polmineR-0.7.0/polmineR/R/contextBundle_class.R | 22 + polmineR-0.7.0/polmineR/R/context_method.R | 66 +-- polmineR-0.7.0/polmineR/R/cooccurrences_class.R | 11 polmineR-0.7.0/polmineR/R/cooccurrences_method.R | 227 +++++++++--- polmineR-0.7.0/polmineR/R/corpus_method.R | 26 - polmineR-0.7.0/polmineR/R/count_method.R | 133 +++++-- polmineR-0.7.0/polmineR/R/decode_method.R |only polmineR-0.7.0/polmineR/R/dispersion_method.R | 2 polmineR-0.7.0/polmineR/R/encode_method.R |only polmineR-0.7.0/polmineR/R/enrich_method.R | 2 polmineR-0.7.0/polmineR/R/getTokenStream_method.R | 43 +- polmineR-0.7.0/polmineR/R/html_method.R | 76 ++-- polmineR-0.7.0/polmineR/R/kwic_class.R | 1 polmineR-0.7.0/polmineR/R/kwic_method.R | 110 ++---- polmineR-0.7.0/polmineR/R/kwic_methods.R | 17 polmineR-0.7.0/polmineR/R/mail_method.R | 29 - polmineR-0.7.0/polmineR/R/meta_method.R | 25 + polmineR-0.7.0/polmineR/R/ngrams_method.R | 8 polmineR-0.7.0/polmineR/R/noise_method.R | 9 polmineR-0.7.0/polmineR/R/pAttributes_method.R | 15 polmineR-0.7.0/polmineR/R/partitionBundle_class.R | 3 polmineR-0.7.0/polmineR/R/partitionBundle_method.R | 2 polmineR-0.7.0/polmineR/R/partitionBundle_methods.R | 31 - polmineR-0.7.0/polmineR/R/partition_class.R | 37 +- polmineR-0.7.0/polmineR/R/partition_method.R | 79 ++-- polmineR-0.7.0/polmineR/R/polmineR_package.R | 13 polmineR-0.7.0/polmineR/R/read_method.R | 84 +++- polmineR-0.7.0/polmineR/R/registry.R | 13 polmineR-0.7.0/polmineR/R/sAttributes_method.R | 60 ++- polmineR-0.7.0/polmineR/R/templates_method.R |only polmineR-0.7.0/polmineR/R/trim_method.R | 12 polmineR-0.7.0/polmineR/R/utils.R | 25 + polmineR-0.7.0/polmineR/R/zzz.R | 51 ++ polmineR-0.7.0/polmineR/build/vignette.rds |binary polmineR-0.7.0/polmineR/configure |only polmineR-0.7.0/polmineR/inst/CITATION | 10 polmineR-0.7.0/polmineR/inst/doc/vignette.R | 11 polmineR-0.7.0/polmineR/inst/doc/vignette.Rnw | 11 polmineR-0.7.0/polmineR/inst/doc/vignette.pdf |binary polmineR-0.7.0/polmineR/inst/graffle |only polmineR-0.7.0/polmineR/man/Corpus-class.Rd |only polmineR-0.7.0/polmineR/man/Regions-class.Rd |only polmineR-0.7.0/polmineR/man/TokenStream-class.Rd |only polmineR-0.7.0/polmineR/man/as.DocumentTermMatrix.Rd | 47 +- polmineR-0.7.0/polmineR/man/as.markdown.Rd | 22 - polmineR-0.7.0/polmineR/man/as.sparseMatrix.Rd |only polmineR-0.7.0/polmineR/man/as.speeches-method.Rd | 2 polmineR-0.7.0/polmineR/man/blapply.Rd | 2 polmineR-0.7.0/polmineR/man/bundle-class.Rd | 5 polmineR-0.7.0/polmineR/man/compare-method.Rd | 7 polmineR-0.7.0/polmineR/man/context-method.Rd | 11 polmineR-0.7.0/polmineR/man/cooccurrences.Rd | 36 +- polmineR-0.7.0/polmineR/man/count-method.Rd | 23 - polmineR-0.7.0/polmineR/man/decode.Rd |only polmineR-0.7.0/polmineR/man/dispersion-method.Rd | 2 polmineR-0.7.0/polmineR/man/encode.Rd |only polmineR-0.7.0/polmineR/man/getObjects.Rd |only polmineR-0.7.0/polmineR/man/getSlot.Rd |only polmineR-0.7.0/polmineR/man/getTokenStream-method.Rd | 21 - polmineR-0.7.0/polmineR/man/html-method.Rd | 6 polmineR-0.7.0/polmineR/man/kwic-class.Rd | 5 polmineR-0.7.0/polmineR/man/kwic.Rd | 13 polmineR-0.7.0/polmineR/man/mail-method.Rd | 4 polmineR-0.7.0/polmineR/man/meta-method.Rd | 5 polmineR-0.7.0/polmineR/man/ngrams.Rd | 4 polmineR-0.7.0/polmineR/man/pAttributes.Rd | 18 - polmineR-0.7.0/polmineR/man/partition-class.Rd | 20 - polmineR-0.7.0/polmineR/man/partition.Rd | 11 polmineR-0.7.0/polmineR/man/partitionBundle-class.Rd | 10 polmineR-0.7.0/polmineR/man/partitionBundle-method.Rd | 2 polmineR-0.7.0/polmineR/man/polmineR-package.Rd | 8 polmineR-0.7.0/polmineR/man/read-method.Rd | 53 +- polmineR-0.7.0/polmineR/man/sAttributes-method.Rd | 35 + polmineR-0.7.0/polmineR/man/templates.Rd |only polmineR-0.7.0/polmineR/vignettes/vignette.Rnw | 11 97 files changed, 1469 insertions(+), 957 deletions(-)
Title: Most Likely Transformations
Description: Likelihood-based estimation of conditional transformation
models via the most likely transformation approach described in
Hothorn et al. (2016) <arXiv:1508.06749>.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between mlt versions 0.1-1 dated 2016-11-29 and 0.1-2 dated 2017-02-14
DESCRIPTION | 13 MD5 | 30 R/methods.R | 10 R/mlt.R | 4 R/plot.R | 9 R/utils.R | 14 inst/NEWS.Rd | 13 man/mlt-methods.Rd | 2 tests/bugfixes.R | 10 tests/bugfixes.Rout.save | 15 tests/dpq-Ex.R | 13 tests/dpq-Ex.Rout.save | 3495 --------------------------------------------- tests/glm-Ex.R | 40 tests/glm-Ex.Rout.save | 90 - tests/predict-Ex.R | 23 tests/predict-Ex.Rout.save | 49 16 files changed, 320 insertions(+), 3510 deletions(-)
Title: Infrastructure for Computing with Basis Functions
Description: Some very simple infrastructure for basis functions.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between basefun versions 0.0-34 dated 2016-12-14 and 0.0-35 dated 2017-02-14
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/box_bases.R | 9 +++++++-- R/utils.R | 6 +++--- inst/NEWS.Rd | 6 ++++++ 5 files changed, 24 insertions(+), 13 deletions(-)
Title: Maxent Distribution Model Selection
Description: Tools for training, selecting, and evaluating maximum entropy
(Maxent) distribution models. This package provides tools for user-
controlled transformation of explanatory variables, selection of variables
by nested model comparison, and flexible model evaluation and projection.
It is based on the strict maximum likelihood interpretation of maximum
entropy modelling.
Author: Julien Vollering [aut, cre],
Sabrina Mazzoni [aut],
Rune Halvorsen [aut]
Maintainer: Julien Vollering <julien.vollering@hvl.no>
Diff between MIAmaxent versions 0.3.7 dated 2016-09-14 and 0.4.0 dated 2017-02-14
DESCRIPTION | 16 +-- LICENSE | 2 MD5 | 34 +++--- NEWS.md | 8 + R/deriveVars.R | 12 +- R/parsdvs.R | 19 +-- R/parsevs.R | 38 +++---- R/plotFOP.R | 4 R/plotResp.R | 8 - R/plotResp2.R | 2 R/selectDVforEV.R | 11 +- R/selectEV.R | 11 +- R/utils.R | 19 --- README.md | 4 build/vignette.rds |binary inst/doc/modeling-example.html | 206 ++++++++++++++++++++--------------------- inst/extdata/1.lambdas | 35 +++--- vignettes/modeling-example.Rmd | 31 ++---- 18 files changed, 227 insertions(+), 233 deletions(-)
Title: Linear Regression using I-Priors
Description: Provides methods to perform and analyse I-prior regression models.
Estimation is mainly done via an EM algorithm, but there is flexibility in
using any optimiser.
Author: Haziq Jamil [aut, cre]
Maintainer: Haziq Jamil <haziq.jamil@gmail.com>
Diff between iprior versions 0.6.3 dated 2017-01-14 and 0.6.4 dated 2017-02-14
DESCRIPTION | 12 +++--- MD5 | 67 ++++++++++++++++++----------------- NAMESPACE | 4 ++ NEWS.md | 11 +++++ R/Hlam.R |only R/Kernel_loader.R | 26 +++++++------ R/fbmOptim.R | 20 ++++++---- R/fisher.R | 44 ++++++++++++++++++++-- R/iprior.R | 11 ++++- R/ipriorEM.R | 27 ++++++++++++-- R/ipriorEM_helper.R | 23 ++++++++---- R/vary.R |only R/varyinv.R |only README.md | 8 ++-- inst/doc/iprior_vignette.html | 32 +++++++--------- man/Hlam.Rd |only man/datfbm.Rd | 1 man/fbmOptim.Rd | 10 ++++- man/hsb.Rd | 1 man/hsbsmall.Rd | 1 man/iprior.Rd | 27 +++++++++----- man/ipriorColPal.Rd | 1 man/ipriorOptim.Rd | 1 man/kernL.Rd | 19 +++++---- man/kernel.Rd | 3 - man/logLik.Rd | 9 ++-- man/plot.Rd | 1 man/pollution.Rd | 1 man/predict.Rd | 1 man/progress.Rd | 1 man/sigma.Rd | 1 man/simdat.Rd | 1 man/slope.Rd | 1 man/vary.Rd |only tests/testthat/Rplots.pdf |binary tests/testthat/test-2kernel_loader.R | 15 +++++++ tests/testthat/test-5mixed_kernel.R | 14 +++++++ 37 files changed, 262 insertions(+), 132 deletions(-)
Title: EM Algorithms for Estimating Item Response Theory Models
Description: Various Expectation-Maximization (EM) algorithms are implemented for item response theory
(IRT) models. The current implementation includes IRT models for binary and ordinal
responses, along with dynamic and hierarchical IRT models with binary responses. The
latter two models are derived and implemented using variational EM. Subsequent edits
also include variational network and text scaling models.
Author: Kosuke Imai <kimai@princeton.edu>, James Lo <lojames@usc.edu>, Jonathan Olmsted <jpolmsted@gmail.com>
Maintainer: James Lo <lojames@usc.edu>
Diff between emIRT versions 0.0.7 dated 2016-07-29 and 0.0.8 dated 2017-02-14
ChangeLog | 4 +++- DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- man/dynIRT.Rd | 7 +------ man/hierIRT.Rd | 7 +------ 5 files changed, 13 insertions(+), 21 deletions(-)
Title: Decode Coded Variables to Plain Text and the Other Way Around
Description: Main function "decode" is used to decode coded key values to plain
text. Function "code" can be used to code plain text to code if there is a
1:1 relation between the two. The concept relies on 'keyvalue' objects used
for translation. There are several 'keyvalue' objects included in the areas
of geographical regional codes, administrative health care unit codes,
diagnosis codes and more. It is also easy to extend the use by arbitrary
code sets.
Author: Erik Bulow [aut, cre]
Maintainer: Erik Bulow <erik.bulow@rccvast.se>
Diff between decoder versions 1.1.11 dated 2017-02-10 and 1.1.12 dated 2017-02-14
DESCRIPTION | 7 ++++--- MD5 | 6 +++--- NAMESPACE | 1 + R/internals.R | 4 ++++ 4 files changed, 12 insertions(+), 6 deletions(-)
Title: An Implementation of Parsing and Writing Configuration File
(JSON/INI/YAML/TOML)
Description:
Implements the JSON, INI, YAML and TOML parser for R setting and writing of configuration file. The functionality of this package is similar to that of package 'config'.
Author: Jianfeng Li [aut, cre]
Maintainer: Jianfeng Li <lee_jianfeng@sjtu.edu.cn>
Diff between configr versions 0.0.3 dated 2017-01-16 and 0.1.0 dated 2017-02-14
configr-0.0.3/configr/inst/extdata/config.yml |only configr-0.0.3/configr/tests/testthat/test_configtype.R |only configr-0.0.3/configr/tests/testthat/test_merge.R |only configr-0.0.3/configr/tests/testthat/test_read.R |only configr-0.0.3/configr/tests/testthat/test_write.R |only configr-0.1.0/configr/ChangeLog |only configr-0.1.0/configr/DESCRIPTION | 19 - configr-0.1.0/configr/MD5 | 71 ++-- configr-0.1.0/configr/NAMESPACE | 9 configr-0.1.0/configr/R/active.R |only configr-0.1.0/configr/R/configr.R | 19 + configr-0.1.0/configr/R/configtype.R | 190 +++++++++--- configr-0.1.0/configr/R/convert.R |only configr-0.1.0/configr/R/merge.R | 45 +- configr-0.1.0/configr/R/read.R | 87 +++-- configr-0.1.0/configr/R/utils.R | 181 +++++++++++ configr-0.1.0/configr/R/write.R | 37 +- configr-0.1.0/configr/README.md | 234 ++++++++++----- configr-0.1.0/configr/inst/extdata/config.error.ini |only configr-0.1.0/configr/inst/extdata/config.error.json |only configr-0.1.0/configr/inst/extdata/config.error.toml |only configr-0.1.0/configr/inst/extdata/config.error.yaml |only configr-0.1.0/configr/inst/extdata/config.ini | 4 configr-0.1.0/configr/inst/extdata/config.json | 2 configr-0.1.0/configr/inst/extdata/config.toml |only configr-0.1.0/configr/inst/extdata/config.yaml |only configr-0.1.0/configr/man/config.list.merge.Rd | 2 configr-0.1.0/configr/man/configr.Rd | 20 + configr-0.1.0/configr/man/convert.config.Rd |only configr-0.1.0/configr/man/eval.config.Rd | 18 - configr-0.1.0/configr/man/eval.config.groups.Rd | 13 configr-0.1.0/configr/man/eval.config.merge.Rd | 20 - configr-0.1.0/configr/man/get.config.type.Rd | 25 + configr-0.1.0/configr/man/is.config.active.Rd |only configr-0.1.0/configr/man/is.configfile.active.Rd |only configr-0.1.0/configr/man/is.ini.file.Rd | 24 + configr-0.1.0/configr/man/is.json.file.Rd | 24 + configr-0.1.0/configr/man/is.toml.file.Rd |only configr-0.1.0/configr/man/is.yaml.file.Rd | 25 + configr-0.1.0/configr/man/read.config.Rd | 21 - configr-0.1.0/configr/man/write.config.Rd | 22 - configr-0.1.0/configr/tests/testthat/test_a_configtype.R |only configr-0.1.0/configr/tests/testthat/test_b_read.R |only configr-0.1.0/configr/tests/testthat/test_c_merge.R |only configr-0.1.0/configr/tests/testthat/test_d_write.R |only configr-0.1.0/configr/tests/testthat/test_e_convert.R |only configr-0.1.0/configr/tests/testthat/test_f_toml.R |only configr-0.1.0/configr/tests/testthat/test_g_parameter.R |only configr-0.1.0/configr/tests/testthat/test_h_show.error.R |only configr-0.1.0/configr/tests/testthat/test_j_active.R |only 50 files changed, 799 insertions(+), 313 deletions(-)
Title: Fast and URL-Safe Base64 Encoder and Decoder
Description: In contrast to RFC3548, the 62nd character ("+") is replaced with
"-", the 63rd character ("/") is replaced with "_". Furthermore, the encoder
does not fill the string with trailing "=". The resulting encoded strings
comply to the regular expression pattern "[A-Za-z0-9_-]" and thus are
safe to use in URLs or for file names.
The package also comes with a simple base32 encoder/decoder suited for
case insensitive file systems.
Author: Michel Lang [cre, aut],
Apache Foundation [ctb, cph],
Free Software Foundation [ctb, cph]
Maintainer: Michel Lang <michellang@gmail.com>
Diff between base64url versions 1.0 dated 2016-10-04 and 1.1 dated 2017-02-14
DESCRIPTION | 23 ++++++++++------- MD5 | 27 +++++++++++--------- NAMESPACE | 5 +++ NEWS.md | 6 ++++ R/base32.R |only R/base64.R | 1 README.md | 4 ++ build/vignette.rds |binary inst/doc/Benchmarks.Rmd | 2 - inst/doc/Benchmarks.html | 58 +++++++++++++++++++++---------------------- man/base32_encode.Rd |only man/base64_urlencode.Rd | 6 ++-- src/base32.c |only tests/testthat/helper.R |only tests/testthat/test_base32.R |only tests/testthat/test_base64.R | 9 ------ vignettes/Benchmarks.Rmd | 2 - 17 files changed, 82 insertions(+), 61 deletions(-)