Title: Smoothing for Stream Network Data
Description: Fits flexible additive models to data on stream networks, taking account of flow-connectivity of the network. Models are fitted using penalised least squares.
Author: Alastair Rushworth
Maintainer: Alastair Rushworth <alastairmrushworth@gmail.com>
Diff between smnet versions 2.1 dated 2016-08-29 and 2.1.1 dated 2017-03-30
DESCRIPTION | 10 +++++----- MD5 | 23 ++++++++++++----------- R/smnet.R | 3 +++ README.md |only inst/NEWS | 28 +++++++++++++++++++--------- man/get_adjacency.Rd | 14 +++++++------- man/m.Rd | 16 ++++++++-------- man/network.Rd | 16 ++++++++-------- man/plot.smnet.Rd | 16 ++++++++-------- man/predict.smnet.Rd | 16 ++++++++-------- man/show_weights.Rd | 16 ++++++++-------- man/smnet.Rd | 16 ++++++++-------- man/summary.smnet.Rd | 16 ++++++++-------- 13 files changed, 102 insertions(+), 88 deletions(-)
Title: 3D Scatter Plot
Description: Plots a three dimensional (3D) point cloud.
Author: Uwe Ligges <ligges@statistik.tu-dortmund.de>, Martin Maechler, Sarah Schnackenberg
Maintainer: Uwe Ligges <ligges@statistik.tu-dortmund.de>
Diff between scatterplot3d versions 0.3-38 dated 2017-01-05 and 0.3-39 dated 2017-03-30
CHANGES | 3 ++ DESCRIPTION | 8 ++--- MD5 | 14 ++++----- NAMESPACE | 2 - R/scatterplot3d.R | 74 +++++++++++++++++++++++++++++++++++++++------------ build/vignette.rds |binary inst/doc/s3d.pdf |binary man/scatterplot3d.Rd | 17 ++++++++--- 8 files changed, 86 insertions(+), 32 deletions(-)
Title: A Gallery of Animations in Statistics and Utilities to Create
Animations
Description: Provides functions for animations in statistics, covering topics
in probability theory, mathematical statistics, multivariate statistics,
non-parametric statistics, sampling survey, linear models, time series,
computational statistics, data mining and machine learning. These functions
may be helpful in teaching statistics and data analysis. Also provided in
this package are a series of functions to save animations to various formats,
e.g. Flash, 'GIF', HTML pages, 'PDF' and videos. 'PDF' animations can be
inserted into 'Sweave' / 'knitr' easily.
Author: Yihui Xie [aut, cre],
Christian Mueller [ctb],
Lijia Yu [ctb],
Weicheng Zhu [ctb]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between animation versions 2.4 dated 2015-08-16 and 2.5 dated 2017-03-30
DESCRIPTION | 32 +++---- MD5 | 203 +++++++++++++++++++++++------------------------ NAMESPACE | 2 NEWS | 9 ++ R/BM.circle.R | 2 R/MC.hitormiss.R | 1 R/MC.samplemean.R | 1 R/Rosling.bubbles.R | 1 R/ani.options.R | 6 - R/animation-package.R | 8 - R/bisection.method.R | 1 R/boot.iid.R | 1 R/boot.lowess.R | 1 R/brownian.motion.R | 2 R/buffon.needle.R | 3 R/clt.ani.R | 2 R/conf.int.R | 1 R/cv.ani.R | 1 R/cv.nfeaturesLDA.R | 1 R/flip.coin.R | 2 R/grad.desc.R | 3 R/im.convert.R | 9 +- R/kmeans.ani.R | 1 R/knn.ani.R | 1 R/least.squares.R | 1 R/lln.ani.R | 2 R/moving.block.R | 1 R/mwar.ani.R | 1 R/newton.method.R | 1 R/pdftk.R | 1 R/price.ani.R | 1 R/qpdf.R | 1 R/quincunx.R | 3 R/sample.cluster.R | 1 R/sample.ratio.R | 1 R/sample.simple.R | 1 R/sample.strat.R | 1 R/sample.system.R | 1 R/saveGIF.R | 14 ++- R/saveHTML.R | 1 R/saveLatex.R | 1 R/saveSWF.R | 1 R/saveVideo.R | 14 ++- R/sim.qqnorm.R | 1 R/vi.grid.illusion.R | 1 R/vi.lilac.chaser.R | 2 demo/00Index | 1 demo/lissajous.R |only man/BM.circle.Rd | 28 ------ man/CLELAL09.Rd | 1 man/HuSpeech.Rd | 1 man/MC.hitormiss.Rd | 27 ------ man/MC.samplemean.Rd | 36 -------- man/ObamaSpeech.Rd | 3 man/Rosling.bubbles.Rd | 31 ------- man/ani.options.Rd | 44 +--------- man/ani.pause.Rd | 8 + man/ani.record.Rd | 7 - man/ani.start.Rd | 1 man/animation-package.Rd | 63 +------------- man/bisection.method.Rd | 35 -------- man/boot.iid.Rd | 35 -------- man/boot.lowess.Rd | 20 ---- man/brownian.motion.Rd | 28 ------ man/buffon.needle.Rd | 33 ------- man/clt.ani.Rd | 31 ------- man/conf.int.Rd | 26 ------ man/convert.Rd | 35 +------- man/cv.ani.Rd | 26 ------ man/cv.nfeaturesLDA.Rd | 27 ------ man/ecol.death.sim.Rd | 9 +- man/flip.coin.Rd | 31 ------- man/g.brownian.motion.Rd | 7 - man/grad.desc.Rd | 51 ----------- man/iatemp.Rd | 1 man/kfcv.Rd | 7 - man/kmeans.ani.Rd | 39 --------- man/knn.ani.Rd | 40 --------- man/least.squares.Rd | 29 ------ man/lln.ani.Rd | 25 ----- man/moving.block.Rd | 53 ------------ man/mwar.ani.Rd | 30 ------ man/newton.method.Rd | 44 ---------- man/pageview.Rd | 1 man/pdftk.Rd | 23 ----- man/pollen.Rd | 1 man/price.ani.Rd | 12 -- man/qpdf.Rd | 23 ----- man/quincunx.Rd | 53 ------------ man/sample.cluster.Rd | 23 ----- man/sample.ratio.Rd | 35 -------- man/sample.simple.Rd | 25 ----- man/sample.strat.Rd | 25 ----- man/sample.system.Rd | 25 ----- man/saveGIF.Rd | 35 +------- man/saveHTML.Rd | 80 +----------------- man/saveLatex.Rd | 37 +------- man/saveSWF.Rd | 26 +----- man/saveVideo.Rd | 33 +------ man/sim.qqnorm.Rd | 26 ------ man/vanke1127.Rd | 30 ------ man/vi.grid.illusion.Rd | 10 -- man/vi.lilac.chaser.Rd | 25 ----- 103 files changed, 361 insertions(+), 1446 deletions(-)
Title: Analysis of Oceanographic Data
Description: Supports the analysis of Oceanographic data, including 'ADCP'
measurements, measurements made with 'argo' floats, 'CTD' measurements,
sectional data, sea-level time series, coastline and topographic data, etc.
Provides specialized functions for calculating seawater properties such as
potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state.
Produces graphical displays that conform to the conventions of the Oceanographic
literature.
Author: Dan Kelley [aut, cre],
Clark Richards [aut],
Chantelle Layton [ctb] (curl() coauthor),
British Geological Survey [ctb, cph] (magnetic-field subroutine),
Pablo Valdés [ctb] (Spanish translation of messages)
Maintainer: Dan Kelley <Dan.Kelley@Dal.Ca>
Diff between oce versions 0.9-20 dated 2016-11-19 and 0.9-21 dated 2017-03-30
oce-0.9-20/oce/man/decodeDataNames.Rd |only oce-0.9-20/oce/man/decodeDataNamesArgo.Rd |only oce-0.9-20/oce/src/ldc_rdi.c |only oce-0.9-20/oce/src/ldc_rdi_2.c |only oce-0.9-20/oce/src/stutter_time.c |only oce-0.9-20/oce/tests/colormap.R |only oce-0.9-20/oce/tests/subset.R |only oce-0.9-21/oce/DESCRIPTION | 12 oce-0.9-21/oce/MD5 | 1114 +++++++-------- oce-0.9-21/oce/NAMESPACE | 9 oce-0.9-21/oce/NEWS | 15 oce-0.9-21/oce/R/AllClass.R | 161 +- oce-0.9-21/oce/R/accessors.R | 75 - oce-0.9-21/oce/R/ad.R | 21 oce-0.9-21/oce/R/adp.R | 1216 +++++++++-------- oce-0.9-21/oce/R/adp.nortek.R | 144 +- oce-0.9-21/oce/R/adp.rdi.R | 1081 ++++++++------- oce-0.9-21/oce/R/adp.sontek.R | 138 - oce-0.9-21/oce/R/adv.R | 539 +++---- oce-0.9-21/oce/R/adv.nortek.R | 208 +- oce-0.9-21/oce/R/adv.sontek.R | 195 +- oce-0.9-21/oce/R/air.R | 11 oce-0.9-21/oce/R/amsr.R | 98 - oce-0.9-21/oce/R/argo.R | 503 ++++--- oce-0.9-21/oce/R/bremen.R | 11 oce-0.9-21/oce/R/cm.R | 51 oce-0.9-21/oce/R/coastline.R | 138 - oce-0.9-21/oce/R/colors.R | 373 ++--- oce-0.9-21/oce/R/ctd.R | 751 +++++----- oce-0.9-21/oce/R/ctd.itp.R | 22 oce-0.9-21/oce/R/ctd.odf.R | 11 oce-0.9-21/oce/R/ctd.sbe.R | 367 ++--- oce-0.9-21/oce/R/ctd.woce.R | 336 +++- oce-0.9-21/oce/R/echosounder.R | 149 +- oce-0.9-21/oce/R/g1sst.R | 8 oce-0.9-21/oce/R/geod.R | 56 oce-0.9-21/oce/R/gps.R | 47 oce-0.9-21/oce/R/imagep.R | 205 +- oce-0.9-21/oce/R/index.R | 14 oce-0.9-21/oce/R/ladp.R | 56 oce-0.9-21/oce/R/landsat.R | 190 +- oce-0.9-21/oce/R/lisst.R | 16 oce-0.9-21/oce/R/lobo.R | 66 oce-0.9-21/oce/R/map.R | 360 ++--- oce-0.9-21/oce/R/met.R | 729 ++++++++-- oce-0.9-21/oce/R/misc.R | 649 ++++----- oce-0.9-21/oce/R/moon.R | 74 - oce-0.9-21/oce/R/oce.R | 711 +++++---- oce-0.9-21/oce/R/odf.R | 336 +++- oce-0.9-21/oce/R/processingLog.R | 1 oce-0.9-21/oce/R/rsk.R | 381 +++-- oce-0.9-21/oce/R/run.R | 1 oce-0.9-21/oce/R/satellite.R | 8 oce-0.9-21/oce/R/sealevel.R | 173 +- oce-0.9-21/oce/R/section.R | 759 +++++----- oce-0.9-21/oce/R/spectral.R | 28 oce-0.9-21/oce/R/sun.R | 7 oce-0.9-21/oce/R/sw.R | 158 +- oce-0.9-21/oce/R/tidem.R | 469 +++--- oce-0.9-21/oce/R/topo.R | 238 +-- oce-0.9-21/oce/R/windrose.R | 93 - oce-0.9-21/oce/build/vignette.rds |binary oce-0.9-21/oce/data/adp.rda |binary oce-0.9-21/oce/data/argo.rda |binary oce-0.9-21/oce/data/ctd.rda |binary oce-0.9-21/oce/data/ctdRaw.rda |binary oce-0.9-21/oce/data/met.rda |binary oce-0.9-21/oce/inst/doc/oce.html | 214 +- oce-0.9-21/oce/man/GMTOffsetFromTz.Rd | 7 oce-0.9-21/oce/man/ODF2oce.Rd | 12 oce-0.9-21/oce/man/ODFNames2oceNames.Rd | 49 oce-0.9-21/oce/man/T68fromT90.Rd | 7 oce-0.9-21/oce/man/T90fromT48.Rd | 7 oce-0.9-21/oce/man/T90fromT68.Rd | 7 oce-0.9-21/oce/man/abbreviateTimeLabels.Rd | 7 oce-0.9-21/oce/man/addColumn.Rd | 10 oce-0.9-21/oce/man/adp-class.Rd | 23 oce-0.9-21/oce/man/adp.Rd | 12 oce-0.9-21/oce/man/adpEnsembleAverage.Rd |only oce-0.9-21/oce/man/adv-class.Rd | 1 oce-0.9-21/oce/man/adv.Rd | 1 oce-0.9-21/oce/man/airRho.Rd | 16 oce-0.9-21/oce/man/amsr-class.Rd | 18 oce-0.9-21/oce/man/angleRemap.Rd | 1 oce-0.9-21/oce/man/applyMagneticDeclination.Rd | 9 oce-0.9-21/oce/man/approx3d.Rd | 3 oce-0.9-21/oce/man/argShow.Rd | 1 oce-0.9-21/oce/man/argo-class.Rd | 12 oce-0.9-21/oce/man/argo.Rd | 4 oce-0.9-21/oce/man/argoGrid.Rd | 11 oce-0.9-21/oce/man/argoNames2oceNames.Rd |only oce-0.9-21/oce/man/as.adp.Rd | 18 oce-0.9-21/oce/man/as.argo.Rd | 12 oce-0.9-21/oce/man/as.cm.Rd | 5 oce-0.9-21/oce/man/as.coastline.Rd | 7 oce-0.9-21/oce/man/as.ctd.Rd | 33 oce-0.9-21/oce/man/as.echosounder.Rd | 7 oce-0.9-21/oce/man/as.gps.Rd | 7 oce-0.9-21/oce/man/as.ladp.Rd | 7 oce-0.9-21/oce/man/as.lisst.Rd | 7 oce-0.9-21/oce/man/as.lobo.Rd | 7 oce-0.9-21/oce/man/as.met.Rd | 34 oce-0.9-21/oce/man/as.oce.Rd | 9 oce-0.9-21/oce/man/as.rsk.Rd | 7 oce-0.9-21/oce/man/as.sealevel.Rd | 7 oce-0.9-21/oce/man/as.section.Rd | 7 oce-0.9-21/oce/man/as.topo.Rd | 7 oce-0.9-21/oce/man/as.unit.Rd | 1 oce-0.9-21/oce/man/as.windrose.Rd | 7 oce-0.9-21/oce/man/bcdToInteger.Rd | 1 oce-0.9-21/oce/man/beamName.Rd | 18 oce-0.9-21/oce/man/beamToXyz.Rd | 13 oce-0.9-21/oce/man/beamToXyzAdp.Rd | 30 oce-0.9-21/oce/man/beamToXyzAdv.Rd | 18 oce-0.9-21/oce/man/beamUnspreadAdp.Rd | 22 oce-0.9-21/oce/man/binApply1D.Rd | 7 oce-0.9-21/oce/man/binApply2D.Rd | 9 oce-0.9-21/oce/man/binAverage.Rd | 7 oce-0.9-21/oce/man/binCount1D.Rd | 7 oce-0.9-21/oce/man/binCount2D.Rd | 11 oce-0.9-21/oce/man/binMean1D.Rd | 9 oce-0.9-21/oce/man/binMean2D.Rd | 13 oce-0.9-21/oce/man/binmapAdp.Rd | 29 oce-0.9-21/oce/man/bound125.Rd | 1 oce-0.9-21/oce/man/bremen-class.Rd | 7 oce-0.9-21/oce/man/byteToBinary.Rd | 1 oce-0.9-21/oce/man/cm-class.Rd | 19 oce-0.9-21/oce/man/cm.Rd | 1 oce-0.9-21/oce/man/cnvName2oceName.Rd | 22 oce-0.9-21/oce/man/coastline-class.Rd | 7 oce-0.9-21/oce/man/coastlineBest.Rd | 7 oce-0.9-21/oce/man/coastlineCut.Rd | 4 oce-0.9-21/oce/man/coastlineWorld.Rd | 8 oce-0.9-21/oce/man/colormap.Rd | 9 oce-0.9-21/oce/man/colors.Rd | 7 oce-0.9-21/oce/man/composite-amsr-method.Rd | 7 oce-0.9-21/oce/man/composite-list-method.Rd | 13 oce-0.9-21/oce/man/composite.Rd | 6 oce-0.9-21/oce/man/coriolis.Rd | 22 oce-0.9-21/oce/man/ctd-class.Rd | 34 oce-0.9-21/oce/man/ctd.Rd | 3 oce-0.9-21/oce/man/ctdAddColumn.Rd | 14 oce-0.9-21/oce/man/ctdDecimate.Rd | 16 oce-0.9-21/oce/man/ctdFindProfiles.Rd | 11 oce-0.9-21/oce/man/ctdRaw.Rd | 23 oce-0.9-21/oce/man/ctdTrim.Rd | 17 oce-0.9-21/oce/man/ctdUpdateHeader.Rd | 13 oce-0.9-21/oce/man/ctimeToSeconds.Rd | 8 oce-0.9-21/oce/man/curl.Rd | 18 oce-0.9-21/oce/man/dataLabel.Rd | 1 oce-0.9-21/oce/man/decimate.Rd | 10 oce-0.9-21/oce/man/decodeHeaderNortek.Rd | 7 oce-0.9-21/oce/man/decodeTime.Rd | 7 oce-0.9-21/oce/man/despike.Rd | 3 oce-0.9-21/oce/man/detrend.Rd | 3 oce-0.9-21/oce/man/download.amsr.Rd | 49 oce-0.9-21/oce/man/download.coastline.Rd | 10 oce-0.9-21/oce/man/download.met.Rd |only oce-0.9-21/oce/man/download.topo.Rd | 37 oce-0.9-21/oce/man/drawDirectionField.Rd | 7 oce-0.9-21/oce/man/drawIsopycnals.Rd | 7 oce-0.9-21/oce/man/drawPalette.Rd | 12 oce-0.9-21/oce/man/echosounder-class.Rd | 30 oce-0.9-21/oce/man/echosounder.Rd | 7 oce-0.9-21/oce/man/eclipticalToEquatorial.Rd | 11 oce-0.9-21/oce/man/enuToOther.Rd | 11 oce-0.9-21/oce/man/enuToOtherAdp.Rd | 18 oce-0.9-21/oce/man/enuToOtherAdv.Rd | 11 oce-0.9-21/oce/man/equatorialToLocalHorizontal.Rd | 7 oce-0.9-21/oce/man/errorbars.Rd | 1 oce-0.9-21/oce/man/fillGap.Rd | 2 oce-0.9-21/oce/man/findBottom.Rd | 7 oce-0.9-21/oce/man/findInOrdered.Rd | 3 oce-0.9-21/oce/man/firstFinite.Rd | 1 oce-0.9-21/oce/man/formatCI.Rd | 7 oce-0.9-21/oce/man/formatPosition.Rd | 1 oce-0.9-21/oce/man/fullFilename.Rd | 1 oce-0.9-21/oce/man/g1sst-class.Rd | 8 oce-0.9-21/oce/man/geodDist.Rd | 11 oce-0.9-21/oce/man/geodGc.Rd | 14 oce-0.9-21/oce/man/geodXy.Rd | 10 oce-0.9-21/oce/man/geodXyInverse.Rd | 1 oce-0.9-21/oce/man/gps-class.Rd | 7 oce-0.9-21/oce/man/grad.Rd | 9 oce-0.9-21/oce/man/gravity.Rd | 7 oce-0.9-21/oce/man/handleFlags-argo-method.Rd | 39 oce-0.9-21/oce/man/handleFlags-ctd-method.Rd | 18 oce-0.9-21/oce/man/handleFlags-section-method.Rd | 20 oce-0.9-21/oce/man/handleFlags-vector-method.Rd | 6 oce-0.9-21/oce/man/handleFlags.Rd | 17 oce-0.9-21/oce/man/head.oce.Rd | 1 oce-0.9-21/oce/man/imagep.Rd | 41 oce-0.9-21/oce/man/integerToAscii.Rd | 1 oce-0.9-21/oce/man/integrateTrapezoid.Rd | 25 oce-0.9-21/oce/man/interpBarnes.Rd | 9 oce-0.9-21/oce/man/julianCenturyAnomaly.Rd | 8 oce-0.9-21/oce/man/julianDay.Rd | 8 oce-0.9-21/oce/man/ladp-class.Rd | 8 oce-0.9-21/oce/man/landsat-class.Rd | 16 oce-0.9-21/oce/man/landsat.Rd | 1 oce-0.9-21/oce/man/landsatAdd.Rd | 7 oce-0.9-21/oce/man/landsatTrim.Rd | 7 oce-0.9-21/oce/man/latFormat.Rd | 7 oce-0.9-21/oce/man/latlonFormat.Rd | 7 oce-0.9-21/oce/man/lisst-class.Rd | 7 oce-0.9-21/oce/man/lisst.Rd | 7 oce-0.9-21/oce/man/lobo-class.Rd | 7 oce-0.9-21/oce/man/lobo.Rd | 7 oce-0.9-21/oce/man/lonFormat.Rd | 7 oce-0.9-21/oce/man/lonlat2map.Rd | 9 oce-0.9-21/oce/man/lonlat2utm.Rd | 7 oce-0.9-21/oce/man/lookWithin.Rd | 3 oce-0.9-21/oce/man/magneticField.Rd | 20 oce-0.9-21/oce/man/makeFilter.Rd | 19 oce-0.9-21/oce/man/makeSection.Rd | 1 oce-0.9-21/oce/man/map2lonlat.Rd | 10 oce-0.9-21/oce/man/mapArrows.Rd | 12 oce-0.9-21/oce/man/mapAxis.Rd | 7 oce-0.9-21/oce/man/mapContour.Rd | 16 oce-0.9-21/oce/man/mapCoordinateSystem.Rd |only oce-0.9-21/oce/man/mapDirectionField.Rd | 18 oce-0.9-21/oce/man/mapGrid.Rd | 10 oce-0.9-21/oce/man/mapImage.Rd | 15 oce-0.9-21/oce/man/mapLines.Rd | 9 oce-0.9-21/oce/man/mapLocator.Rd | 7 oce-0.9-21/oce/man/mapLongitudeLatitudeXY.Rd | 11 oce-0.9-21/oce/man/mapMeridians.Rd | 33 oce-0.9-21/oce/man/mapPlot.Rd | 31 oce-0.9-21/oce/man/mapPoints.Rd | 20 oce-0.9-21/oce/man/mapPolygon.Rd | 22 oce-0.9-21/oce/man/mapScalebar.Rd | 20 oce-0.9-21/oce/man/mapText.Rd | 9 oce-0.9-21/oce/man/mapTissot.Rd | 22 oce-0.9-21/oce/man/mapZones.Rd | 33 oce-0.9-21/oce/man/matchBytes.Rd | 1 oce-0.9-21/oce/man/matrixShiftLongitude.Rd | 1 oce-0.9-21/oce/man/matrixSmooth.Rd | 13 oce-0.9-21/oce/man/met-class.Rd | 21 oce-0.9-21/oce/man/met.Rd | 29 oce-0.9-21/oce/man/metNames2oceNames.Rd |only oce-0.9-21/oce/man/moonAngle.Rd | 13 oce-0.9-21/oce/man/numberAsHMS.Rd | 8 oce-0.9-21/oce/man/numberAsPOSIXct.Rd | 12 oce-0.9-21/oce/man/oce-class.Rd | 4 oce-0.9-21/oce/man/oce-deprecated.Rd | 60 oce-0.9-21/oce/man/oce.Rd | 14 oce-0.9-21/oce/man/oce.as.POSIXlt.Rd | 31 oce-0.9-21/oce/man/oce.as.raw.Rd | 1 oce-0.9-21/oce/man/oce.axis.POSIXct.Rd | 24 oce-0.9-21/oce/man/oce.colorsGebco.Rd | 3 oce-0.9-21/oce/man/oce.colorsTwo.Rd | 53 oce-0.9-21/oce/man/oce.contour.Rd | 1 oce-0.9-21/oce/man/oce.grid.Rd | 1 oce-0.9-21/oce/man/oce.plot.ts.Rd | 10 oce-0.9-21/oce/man/oce.write.table.Rd | 7 oce-0.9-21/oce/man/oceApprox.Rd | 17 oce-0.9-21/oce/man/oceCRS.Rd | 8 oce-0.9-21/oce/man/oceConvolve.Rd | 3 oce-0.9-21/oce/man/oceDebug.Rd | 9 oce-0.9-21/oce/man/oceDeleteData.Rd | 1 oce-0.9-21/oce/man/oceDeleteMetadata.Rd | 1 oce-0.9-21/oce/man/oceEdit.Rd | 3 oce-0.9-21/oce/man/oceFilter.Rd | 7 oce-0.9-21/oce/man/oceGetData.Rd | 1 oce-0.9-21/oce/man/oceGetMetadata.Rd | 1 oce-0.9-21/oce/man/oceMagic.Rd | 9 oce-0.9-21/oce/man/ocePmatch.Rd | 9 oce-0.9-21/oce/man/oceSetData.Rd | 35 oce-0.9-21/oce/man/oceSetMetadata.Rd | 1 oce-0.9-21/oce/man/oceSmooth.Rd | 9 oce-0.9-21/oce/man/oceSpectrum.Rd | 9 oce-0.9-21/oce/man/odf-class.Rd | 24 oce-0.9-21/oce/man/parseLatLon.Rd | 7 oce-0.9-21/oce/man/plot-adp-method.Rd | 40 oce-0.9-21/oce/man/plot-adv-method.Rd | 11 oce-0.9-21/oce/man/plot-amsr-method.Rd | 7 oce-0.9-21/oce/man/plot-argo-method.Rd | 29 oce-0.9-21/oce/man/plot-bremen-method.Rd | 7 oce-0.9-21/oce/man/plot-cm-method.Rd | 7 oce-0.9-21/oce/man/plot-coastline-method.Rd | 10 oce-0.9-21/oce/man/plot-ctd-method.Rd | 18 oce-0.9-21/oce/man/plot-echosounder-method.Rd | 7 oce-0.9-21/oce/man/plot-gps-method.Rd | 7 oce-0.9-21/oce/man/plot-ladp-method.Rd | 15 oce-0.9-21/oce/man/plot-landsat-method.Rd | 15 oce-0.9-21/oce/man/plot-lisst-method.Rd | 7 oce-0.9-21/oce/man/plot-lobo-method.Rd | 11 oce-0.9-21/oce/man/plot-met-method.Rd | 73 - oce-0.9-21/oce/man/plot-oce-method.Rd | 1 oce-0.9-21/oce/man/plot-odf-method.Rd | 18 oce-0.9-21/oce/man/plot-rsk-method.Rd | 7 oce-0.9-21/oce/man/plot-satellite-method.Rd | 15 oce-0.9-21/oce/man/plot-sealevel-method.Rd | 13 oce-0.9-21/oce/man/plot-section-method.Rd | 21 oce-0.9-21/oce/man/plot-tidem-method.Rd | 10 oce-0.9-21/oce/man/plot-topo-method.Rd | 7 oce-0.9-21/oce/man/plot-windrose-method.Rd | 9 oce-0.9-21/oce/man/plotInset.Rd | 7 oce-0.9-21/oce/man/plotPolar.Rd | 1 oce-0.9-21/oce/man/plotProfile.Rd | 64 oce-0.9-21/oce/man/plotScan.Rd | 11 oce-0.9-21/oce/man/plotSticks.Rd | 17 oce-0.9-21/oce/man/plotTS.Rd | 7 oce-0.9-21/oce/man/plotTaylor.Rd | 7 oce-0.9-21/oce/man/predict.tidem.Rd | 9 oce-0.9-21/oce/man/prettyPosition.Rd | 1 oce-0.9-21/oce/man/processingLog-set.Rd | 1 oce-0.9-21/oce/man/processingLogAppend.Rd | 1 oce-0.9-21/oce/man/processingLogItem.Rd | 1 oce-0.9-21/oce/man/processingLogShow.Rd | 1 oce-0.9-21/oce/man/pwelch.Rd | 8 oce-0.9-21/oce/man/rangeExtended.Rd | 1 oce-0.9-21/oce/man/rangeLimit.Rd | 1 oce-0.9-21/oce/man/read.adp.Rd | 50 oce-0.9-21/oce/man/read.adp.nortek.Rd | 44 oce-0.9-21/oce/man/read.adp.rdi.Rd | 115 + oce-0.9-21/oce/man/read.adp.sontek.Rd | 44 oce-0.9-21/oce/man/read.adp.sontek.serial.Rd | 44 oce-0.9-21/oce/man/read.adv.Rd | 8 oce-0.9-21/oce/man/read.adv.nortek.Rd | 8 oce-0.9-21/oce/man/read.adv.sontek.adr.Rd | 8 oce-0.9-21/oce/man/read.adv.sontek.serial.Rd | 8 oce-0.9-21/oce/man/read.adv.sontek.text.Rd | 8 oce-0.9-21/oce/man/read.amsr.Rd | 10 oce-0.9-21/oce/man/read.aquadopp.Rd | 44 oce-0.9-21/oce/man/read.aquadoppHR.Rd | 44 oce-0.9-21/oce/man/read.aquadoppProfiler.Rd | 44 oce-0.9-21/oce/man/read.argo.Rd | 36 oce-0.9-21/oce/man/read.bremen.Rd | 8 oce-0.9-21/oce/man/read.cm.Rd | 8 oce-0.9-21/oce/man/read.coastline.Rd | 1 oce-0.9-21/oce/man/read.coastline.openstreetmap.Rd | 7 oce-0.9-21/oce/man/read.coastline.shapefile.Rd | 8 oce-0.9-21/oce/man/read.ctd.Rd | 14 oce-0.9-21/oce/man/read.ctd.itp.Rd | 20 oce-0.9-21/oce/man/read.ctd.odf.Rd | 37 oce-0.9-21/oce/man/read.ctd.sbe.Rd | 14 oce-0.9-21/oce/man/read.ctd.woce.Rd | 16 oce-0.9-21/oce/man/read.ctd.woce.other.Rd | 14 oce-0.9-21/oce/man/read.echosounder.Rd | 8 oce-0.9-21/oce/man/read.g1sst.Rd | 8 oce-0.9-21/oce/man/read.gps.Rd | 7 oce-0.9-21/oce/man/read.index.Rd | 9 oce-0.9-21/oce/man/read.landsat.Rd | 22 oce-0.9-21/oce/man/read.lisst.Rd | 7 oce-0.9-21/oce/man/read.lobo.Rd | 1 oce-0.9-21/oce/man/read.met.Rd | 43 oce-0.9-21/oce/man/read.netcdf.Rd | 3 oce-0.9-21/oce/man/read.oce.Rd | 9 oce-0.9-21/oce/man/read.odf.Rd | 39 oce-0.9-21/oce/man/read.rsk.Rd | 9 oce-0.9-21/oce/man/read.sealevel.Rd | 11 oce-0.9-21/oce/man/read.section.Rd | 8 oce-0.9-21/oce/man/read.topo.Rd | 13 oce-0.9-21/oce/man/renameData.Rd | 3 oce-0.9-21/oce/man/rescale.Rd | 1 oce-0.9-21/oce/man/resizableLabel.Rd | 4 oce-0.9-21/oce/man/retime.Rd | 1 oce-0.9-21/oce/man/rsk-class.Rd | 7 oce-0.9-21/oce/man/rsk.Rd | 1 oce-0.9-21/oce/man/rsk2ctd.Rd | 13 oce-0.9-21/oce/man/rskPatm.Rd | 7 oce-0.9-21/oce/man/rskToc.Rd | 7 oce-0.9-21/oce/man/runlm.Rd | 1 oce-0.9-21/oce/man/satellite-class.Rd | 7 oce-0.9-21/oce/man/sealevel-class.Rd | 8 oce-0.9-21/oce/man/sealevel.Rd | 7 oce-0.9-21/oce/man/sealevelTuktoyaktuk.Rd | 3 oce-0.9-21/oce/man/secondsToCtime.Rd | 8 oce-0.9-21/oce/man/section-class.Rd | 21 oce-0.9-21/oce/man/section.Rd | 1 oce-0.9-21/oce/man/sectionAddStation.Rd | 10 oce-0.9-21/oce/man/sectionGrid.Rd | 8 oce-0.9-21/oce/man/sectionSmooth.Rd | 9 oce-0.9-21/oce/man/sectionSort.Rd | 7 oce-0.9-21/oce/man/shiftLongitude.Rd | 1 oce-0.9-21/oce/man/showMetadataItem.Rd | 1 oce-0.9-21/oce/man/siderealTime.Rd | 7 oce-0.9-21/oce/man/standardDepths.Rd | 1 oce-0.9-21/oce/man/standardizeLongitude.Rd | 1 oce-0.9-21/oce/man/sub-sub-adp-method.Rd | 13 oce-0.9-21/oce/man/sub-sub-adv-method.Rd | 4 oce-0.9-21/oce/man/sub-sub-amsr-method.Rd | 14 oce-0.9-21/oce/man/sub-sub-argo-method.Rd | 5 oce-0.9-21/oce/man/sub-sub-bremen-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-cm-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-coastline-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-ctd-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-echosounder-method.Rd | 4 oce-0.9-21/oce/man/sub-sub-g1sst-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-gps-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-ladp-method.Rd | 8 oce-0.9-21/oce/man/sub-sub-landsat-method.Rd | 9 oce-0.9-21/oce/man/sub-sub-lisst-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-lobo-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-met-method.Rd | 11 oce-0.9-21/oce/man/sub-sub-oce-method.Rd | 5 oce-0.9-21/oce/man/sub-sub-odf-method.Rd | 6 oce-0.9-21/oce/man/sub-sub-rsk-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-sealevel-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-section-method.Rd | 46 oce-0.9-21/oce/man/sub-sub-tidem-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-topo-method.Rd | 2 oce-0.9-21/oce/man/sub-sub-windrose-method.Rd | 2 oce-0.9-21/oce/man/sub-subset-adp-method.Rd | 16 oce-0.9-21/oce/man/sub-subset-adv-method.Rd | 14 oce-0.9-21/oce/man/sub-subset-amsr-method.Rd | 21 oce-0.9-21/oce/man/sub-subset-argo-method.Rd | 10 oce-0.9-21/oce/man/sub-subset-bremen-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-cm-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-coastline-method.Rd | 31 oce-0.9-21/oce/man/sub-subset-ctd-method.Rd | 1 oce-0.9-21/oce/man/sub-subset-echosounder-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-g1sst-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-gps-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-lisst-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-lobo-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-met-method.Rd | 16 oce-0.9-21/oce/man/sub-subset-oce-method.Rd | 1 oce-0.9-21/oce/man/sub-subset-odf-method.Rd | 11 oce-0.9-21/oce/man/sub-subset-rsk-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-sealevel-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-section-method.Rd | 35 oce-0.9-21/oce/man/sub-subset-tidem-method.Rd | 7 oce-0.9-21/oce/man/sub-subset-topo-method.Rd | 23 oce-0.9-21/oce/man/sub-subset-windrose-method.Rd | 7 oce-0.9-21/oce/man/subset-adp-method.Rd | 19 oce-0.9-21/oce/man/subset-adv-method.Rd | 7 oce-0.9-21/oce/man/subset-amsr-method.Rd | 7 oce-0.9-21/oce/man/subset-argo-method.Rd | 17 oce-0.9-21/oce/man/subset-cm-method.Rd | 7 oce-0.9-21/oce/man/subset-coastline-method.Rd | 7 oce-0.9-21/oce/man/subset-ctd-method.Rd | 7 oce-0.9-21/oce/man/subset-echosounder-method.Rd | 7 oce-0.9-21/oce/man/subset-lobo-method.Rd | 7 oce-0.9-21/oce/man/subset-met-method.Rd | 15 oce-0.9-21/oce/man/subset-oce-method.Rd | 3 oce-0.9-21/oce/man/subset-odf-method.Rd | 11 oce-0.9-21/oce/man/subset-rsk-method.Rd | 7 oce-0.9-21/oce/man/subset-sealevel-method.Rd | 7 oce-0.9-21/oce/man/subset-section-method.Rd | 10 oce-0.9-21/oce/man/subset-topo-method.Rd | 7 oce-0.9-21/oce/man/subtractBottomVelocity.Rd | 17 oce-0.9-21/oce/man/summary-adp-method.Rd | 21 oce-0.9-21/oce/man/summary-adv-method.Rd | 7 oce-0.9-21/oce/man/summary-amsr-method.Rd | 7 oce-0.9-21/oce/man/summary-argo-method.Rd | 11 oce-0.9-21/oce/man/summary-bremen-method.Rd | 7 oce-0.9-21/oce/man/summary-cm-method.Rd | 7 oce-0.9-21/oce/man/summary-coastline-method.Rd | 7 oce-0.9-21/oce/man/summary-ctd-method.Rd | 7 oce-0.9-21/oce/man/summary-echosounder-method.Rd | 7 oce-0.9-21/oce/man/summary-gps-method.Rd | 7 oce-0.9-21/oce/man/summary-ladp-method.Rd | 7 oce-0.9-21/oce/man/summary-landsat-method.Rd | 9 oce-0.9-21/oce/man/summary-lisst-method.Rd | 7 oce-0.9-21/oce/man/summary-lobo-method.Rd | 7 oce-0.9-21/oce/man/summary-met-method.Rd | 15 oce-0.9-21/oce/man/summary-oce-method.Rd | 1 oce-0.9-21/oce/man/summary-odf-method.Rd | 9 oce-0.9-21/oce/man/summary-rsk-method.Rd | 7 oce-0.9-21/oce/man/summary-satellite-method.Rd | 7 oce-0.9-21/oce/man/summary-sealevel-method.Rd | 7 oce-0.9-21/oce/man/summary-section-method.Rd | 7 oce-0.9-21/oce/man/summary-tidem-method.Rd | 7 oce-0.9-21/oce/man/summary-topo-method.Rd | 7 oce-0.9-21/oce/man/summary-windrose-method.Rd | 7 oce-0.9-21/oce/man/sunAngle.Rd | 12 oce-0.9-21/oce/man/swAbsoluteSalinity.Rd | 7 oce-0.9-21/oce/man/swAlpha.Rd | 7 oce-0.9-21/oce/man/swAlphaOverBeta.Rd | 7 oce-0.9-21/oce/man/swBeta.Rd | 7 oce-0.9-21/oce/man/swCSTp.Rd | 7 oce-0.9-21/oce/man/swConservativeTemperature.Rd | 7 oce-0.9-21/oce/man/swDepth.Rd | 7 oce-0.9-21/oce/man/swDynamicHeight.Rd | 7 oce-0.9-21/oce/man/swLapseRate.Rd | 7 oce-0.9-21/oce/man/swN2.Rd | 7 oce-0.9-21/oce/man/swPressure.Rd | 7 oce-0.9-21/oce/man/swRho.Rd | 17 oce-0.9-21/oce/man/swRrho.Rd | 7 oce-0.9-21/oce/man/swSCTp.Rd | 12 oce-0.9-21/oce/man/swSTrho.Rd | 7 oce-0.9-21/oce/man/swSigma.Rd | 7 oce-0.9-21/oce/man/swSigma0.Rd | 7 oce-0.9-21/oce/man/swSigma1.Rd | 7 oce-0.9-21/oce/man/swSigma2.Rd | 7 oce-0.9-21/oce/man/swSigma3.Rd | 7 oce-0.9-21/oce/man/swSigma4.Rd | 7 oce-0.9-21/oce/man/swSigmaT.Rd | 7 oce-0.9-21/oce/man/swSigmaTheta.Rd | 7 oce-0.9-21/oce/man/swSoundAbsorption.Rd | 7 oce-0.9-21/oce/man/swSoundSpeed.Rd | 7 oce-0.9-21/oce/man/swSpecificHeat.Rd | 7 oce-0.9-21/oce/man/swSpice.Rd | 7 oce-0.9-21/oce/man/swTFreeze.Rd | 7 oce-0.9-21/oce/man/swTSrho.Rd | 7 oce-0.9-21/oce/man/swThermalConductivity.Rd | 7 oce-0.9-21/oce/man/swTheta.Rd | 9 oce-0.9-21/oce/man/swViscosity.Rd | 7 oce-0.9-21/oce/man/swZ.Rd | 1 oce-0.9-21/oce/man/tail.oce.Rd | 1 oce-0.9-21/oce/man/threenum.Rd | 1 oce-0.9-21/oce/man/tidedata.Rd | 7 oce-0.9-21/oce/man/tidem-class.Rd | 7 oce-0.9-21/oce/man/tidem.Rd | 35 oce-0.9-21/oce/man/tidemAstron.Rd | 9 oce-0.9-21/oce/man/tidemVuf.Rd | 9 oce-0.9-21/oce/man/titleCase.Rd | 1 oce-0.9-21/oce/man/toEnu.Rd | 13 oce-0.9-21/oce/man/toEnuAdp.Rd | 23 oce-0.9-21/oce/man/toEnuAdv.Rd | 11 oce-0.9-21/oce/man/topo-class.Rd | 7 oce-0.9-21/oce/man/topoInterpolate.Rd | 7 oce-0.9-21/oce/man/topoWorld.Rd | 7 oce-0.9-21/oce/man/trimString.Rd | 1 oce-0.9-21/oce/man/unabbreviateYear.Rd | 8 oce-0.9-21/oce/man/undriftTime.Rd | 3 oce-0.9-21/oce/man/unduplicateNames.Rd | 1 oce-0.9-21/oce/man/ungrid.Rd | 1 oce-0.9-21/oce/man/unitFromString.Rd | 1 oce-0.9-21/oce/man/unitFromStringRsk.Rd | 1 oce-0.9-21/oce/man/unwrapAngle.Rd | 3 oce-0.9-21/oce/man/useHeading.Rd | 1 oce-0.9-21/oce/man/utm2lonlat.Rd | 7 oce-0.9-21/oce/man/vectorShow.Rd | 1 oce-0.9-21/oce/man/velocityStatistics.Rd | 19 oce-0.9-21/oce/man/webtide.Rd | 65 oce-0.9-21/oce/man/wind.Rd | 1 oce-0.9-21/oce/man/window.oce.Rd | 7 oce-0.9-21/oce/man/windrose-class.Rd | 1 oce-0.9-21/oce/man/woceNames2oceNames.Rd | 17 oce-0.9-21/oce/man/write.ctd.Rd | 7 oce-0.9-21/oce/man/xyzToEnu.Rd | 13 oce-0.9-21/oce/man/xyzToEnuAdp.Rd | 32 oce-0.9-21/oce/man/xyzToEnuAdv.Rd | 11 oce-0.9-21/oce/src/coastline.c | 14 oce-0.9-21/oce/src/ldc_rdi_in_buffer.c |only oce-0.9-21/oce/src/ldc_rdi_in_file.c |only oce-0.9-21/oce/src/registerDynamicSymbol.c |only oce-0.9-21/oce/src/sw.c | 20 oce-0.9-21/oce/tests/testthat/test_accessors.R | 94 + oce-0.9-21/oce/tests/testthat/test_adp.R | 38 oce-0.9-21/oce/tests/testthat/test_adv.R |only oce-0.9-21/oce/tests/testthat/test_allclass.R | 27 oce-0.9-21/oce/tests/testthat/test_argo.R | 58 oce-0.9-21/oce/tests/testthat/test_astronomical.R | 29 oce-0.9-21/oce/tests/testthat/test_coastline.R | 1 oce-0.9-21/oce/tests/testthat/test_colormap.R |only oce-0.9-21/oce/tests/testthat/test_ctd.R | 103 + oce-0.9-21/oce/tests/testthat/test_datasets.R | 2 oce-0.9-21/oce/tests/testthat/test_flags.R | 39 oce-0.9-21/oce/tests/testthat/test_landsat.R | 1 oce-0.9-21/oce/tests/testthat/test_lisst.R |only oce-0.9-21/oce/tests/testthat/test_local_adp.R | 23 oce-0.9-21/oce/tests/testthat/test_local_adv.R | 11 oce-0.9-21/oce/tests/testthat/test_local_ctd.R | 47 oce-0.9-21/oce/tests/testthat/test_local_echosounder.R | 2 oce-0.9-21/oce/tests/testthat/test_local_odf.R |only oce-0.9-21/oce/tests/testthat/test_met.R |only oce-0.9-21/oce/tests/testthat/test_met.dat.gz |only oce-0.9-21/oce/tests/testthat/test_misc.R | 60 oce-0.9-21/oce/tests/testthat/test_plotting.R | 19 oce-0.9-21/oce/tests/testthat/test_rsk.R | 62 oce-0.9-21/oce/tests/testthat/test_section.R | 21 oce-0.9-21/oce/tests/testthat/test_subset.R |only oce-0.9-21/oce/tests/testthat/test_sw.R | 20 oce-0.9-21/oce/tests/testthat/test_tidem.R |only oce-0.9-21/oce/tests/testthat/test_units.R | 12 oce-0.9-21/oce/tests/testthat/test_webtide.R |only 570 files changed, 10951 insertions(+), 8752 deletions(-)
Title: A GeoJson Processing Toolkit
Description: Includes functions for processing GeoJson objects <https://en.wikipedia.org/wiki/GeoJSON> relying on 'RFC 7946' <https://tools.ietf.org/pdf/rfc7946.pdf>. The geojson encoding is based on 'json11', a tiny JSON library for 'C++11' <https://github.com/dropbox/json11>. Furthermore, the source code is exported in R through the 'Rcpp' and 'RcppArmadillo' packages.
Author: Lampros Mouselimis <mouselimislampros@gmail.com>
Maintainer: Lampros Mouselimis <mouselimislampros@gmail.com>
Diff between geojsonR versions 1.0.0 dated 2017-03-28 and 1.0.1 dated 2017-03-30
DESCRIPTION | 11 +++++++---- MD5 | 18 +++++++++++++----- NEWS.md | 5 ++++- R/utils.R | 34 +++++++++++++++++----------------- README.md | 16 +++++++++++++++- build |only inst/doc |only man/TO_GeoJson.Rd | 34 +++++++++++++++++----------------- vignettes |only 9 files changed, 73 insertions(+), 45 deletions(-)
Title: Greenhouse Gas Flux Calculation from Chamber Measurements
Description: Functions for greenhouse gas flux calculation from chamber
measurements.
Author: Roland Fuss [aut, cre],
Asger R. Pedersen [cph] (for code copied from the not-exported
HMR:::.HMR.fit1 function (version 0.3.1))
Maintainer: Roland Fuss <roland.fuss@thuenen.de>
Diff between gasfluxes versions 0.2 dated 2016-12-23 and 0.2-1 dated 2017-03-30
DESCRIPTION | 14 +++++++------- MD5 | 25 +++++++++++++------------ NEWS.md |only R/gasfluxes.R | 2 +- man/HMR.fit.Rd | 1 - man/HMR.orig.Rd | 7 +++---- man/NDFE.fit.Rd | 1 - man/agg.fluxes.Rd | 1 - man/erfc.Rd | 1 - man/fluxMeas.Rd | 1 - man/gasfluxes-package.Rd | 1 - man/gasfluxes.Rd | 1 - man/lin.fit.Rd | 1 - man/rlin.fit.Rd | 1 - 14 files changed, 24 insertions(+), 33 deletions(-)
Title: Direct, Chain and Average Equating Coefficients with Standard
Errors Using IRT Methods
Description: Computation of direct, chain and average (bisector) equating coefficients with standard errors using Item Response Theory (IRT) methods for dichotomous items. Test scoring can be performed by true score equating and observed score equating methods.
Author: Michela Battauz
Maintainer: Michela Battauz <michela.battauz@uniud.it>
Diff between equateIRT versions 2.0-1 dated 2016-07-25 and 2.0-2 dated 2017-03-30
equateIRT-2.0-1/equateIRT/inst/doc/equateIRT.R |only equateIRT-2.0-1/equateIRT/inst/doc/equateIRT.Rnw |only equateIRT-2.0-1/equateIRT/inst/doc/equateIRT.pdf |only equateIRT-2.0-1/equateIRT/vignettes/equateIRT.Rnw |only equateIRT-2.0-2/equateIRT/DESCRIPTION | 11 +++-- equateIRT-2.0-2/equateIRT/MD5 | 24 +++++++------ equateIRT-2.0-2/equateIRT/R/functions.r | 4 +- equateIRT-2.0-2/equateIRT/build/vignette.rds |binary equateIRT-2.0-2/equateIRT/inst/NEWS | 6 ++- equateIRT-2.0-2/equateIRT/inst/doc/equateIRT_paper.R |only equateIRT-2.0-2/equateIRT/inst/doc/equateIRT_paper.Rnw |only equateIRT-2.0-2/equateIRT/inst/doc/equateIRT_paper.pdf |only equateIRT-2.0-2/equateIRT/inst/doc/equateIRT_tutorial.R |only equateIRT-2.0-2/equateIRT/inst/doc/equateIRT_tutorial.Rmd |only equateIRT-2.0-2/equateIRT/inst/doc/equateIRT_tutorial.html |only equateIRT-2.0-2/equateIRT/man/equateIRT-package.Rd | 4 +- equateIRT-2.0-2/equateIRT/man/import.ltm.Rd | 4 +- equateIRT-2.0-2/equateIRT/vignettes/equateIRT_paper.Rnw |only equateIRT-2.0-2/equateIRT/vignettes/equateIRT_tutorial.Rmd |only 19 files changed, 31 insertions(+), 22 deletions(-)
Title: Software for the Creation of High Density Linkage Maps in
Outcrossing Species
Description: Algorithms that build on the 'OneMap' package to create linkage
maps from high density data in outcrossing species in reasonable time frames.
Author: Bastian Schiffthaler [aut, cre],
Gabriel Margarido [aut],
Marcelo Mollinari [aut],
Karl Broman [ctb],
Augusto Garcia [aut, ctb]
Maintainer: Bastian Schiffthaler <bastian.schiffthaler@umu.se>
Diff between BatchMap versions 1.0.0.0 dated 2017-03-27 and 1.0.1.0 dated 2017-03-30
DESCRIPTION | 8 ++++---- MD5 | 7 ++++--- NEWS |only src/READ_OUTCROSS.cpp | 7 ++++--- src/record.cpp | 10 +++++----- 5 files changed, 17 insertions(+), 15 deletions(-)
More information about spatstat.local at CRAN
Permanent link
Title: Score Test Based on Saddlepoint Approximation
Description: Performs score test using saddlepoint approximation to estimate the null distribution.
Author: Rounak Dey, Seunggeun Lee
Maintainer: Rounak Dey <deyrnk@umich.edu>
Diff between SPAtest versions 1.0.0 dated 2017-02-21 and 1.1.0 dated 2017-03-30
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/SPA_functions.R | 19 ++++++++++++++++--- man/ScoreTest_SPA.Rd | 15 +++++++++++---- 4 files changed, 34 insertions(+), 14 deletions(-)
Title: Convert Rd to 'Roxygen' Documentation
Description: Functions to convert Rd to 'roxygen' documentation. It can parse an
Rd file to a list, create the 'roxygen' documentation and update the original
R script (e.g. the one containing the definition of the function)
accordingly. This package also provides utilities that can help developers
build packages using 'roxygen' more easily. The 'formatR' package can be used
to reformat the R code in the examples sections so that the code will be
more readable.
Author: Hadley Wickham [aut],
Yihui Xie [aut, cre]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between Rd2roxygen versions 1.6.1 dated 2016-04-15 and 1.6.2 dated 2017-03-30
DESCRIPTION | 20 +++++++-------- MD5 | 32 ++++++++++++------------ NAMESPACE | 2 + NEWS | 6 ++++ R/build.R | 13 +++------ build/vignette.rds |binary inst/doc/Rd2roxygen.R | 45 +++++++++++++++------------------ inst/doc/Rd2roxygen.Rmd | 41 +++++++++++++----------------- inst/doc/Rd2roxygen.html | 61 +++++++++++++++------------------------------- man/Rd2roxygen-package.Rd | 1 man/Rd2roxygen.Rd | 1 man/create_roxygen.Rd | 1 man/parse_and_save.Rd | 1 man/parse_file.Rd | 1 man/reformat_code.Rd | 7 +++-- man/roxygen_and_build.Rd | 3 +- vignettes/Rd2roxygen.Rmd | 41 +++++++++++++----------------- 17 files changed, 127 insertions(+), 149 deletions(-)
Title: Optimum Contribution Selection and Population Genetics
Description: A framework for the optimization of breeding programs via optimum contribution selection. An easy to use set of function for computation of optimum contributions of selection candidates, and of the population genetic parameters to be optimized. These parameters can be estimated using pedigree or genotype information, and include kinships, kinships at native haplotype segments, and breed composition of crossbred individuals. They are suitable for managing genetic diversity, removing introgressed genetic material, and accelerating genetic gain. Additionally, functions are provided for computing genetic contributions from ancestors, inbreeding coefficients, the native effective size, the native genome equivalent, pedigree completeness, and for preparing and plotting pedigrees.
Author: Robin Wellmann
Maintainer: Robin Wellmann <r.wellmann@uni-hohenheim.de>
Diff between optiSel versions 0.5 dated 2017-03-23 and 0.6.1 dated 2017-03-30
DESCRIPTION | 8 ++++---- MD5 | 21 +++++++++++---------- R/RcppExports.R | 4 ++++ R/makeA.R | 17 ++++++++++++++--- R/pedBreedComp.R | 4 ++-- R/pedIBDatN.R | 18 ++++++++++-------- build/partial.rdb |binary src/RcppExports.cpp | 18 ++++++++++++++++++ src/rcpp_completeness.cpp | 4 ++-- src/rcpp_genecont.cpp | 4 ++-- src/rcpp_makeA.cpp | 6 ++++-- src/rcpp_makeA_lowMem.cpp |only 12 files changed, 71 insertions(+), 33 deletions(-)
More information about optim.functions at CRAN
Permanent link
Title: Exploring Machine Learning Better, Together
Description: 'OpenML.org' is an online machine learning platform where
researchers can easily download and upload data sets, share machine learning
tasks and experiments and organize them online to work and collaborate more
effectively.
We provide an R interface to the OpenML REST API in order to download and
upload data sets, tasks, flows and runs, see <http://www.openml.org/guide>
for more information.
Author: Giuseppe Casalicchio <giuseppe.casalicchio@stat.uni-muenchen.de>,
Bernd Bischl <bernd_bischl@gmx.net>,
Dominik Kirchhoff <dom.kirchhoff@gmail.com>,
Michel Lang <michellang@gmail.com>,
Benjamin Hofner <benjamin.hofner@fau.de>,
Jakob Bossek <j.bossek@gmail.com>,
Pascal Kerschke <kerschke@uni-muenster.de>,
Joaquin Vanschoren <joaquin.vanschoren@gmail.com>
Maintainer: Giuseppe Casalicchio <giuseppe.casalicchio@stat.uni-muenchen.de>
Diff between OpenML versions 1.2 dated 2017-02-07 and 1.3 dated 2017-03-30
OpenML-1.2/OpenML/inst/doc/OpenML.pdf |only OpenML-1.2/OpenML/inst/doc/OpenML.pdf.asis |only OpenML-1.2/OpenML/vignettes/OpenML.pdf.asis |only OpenML-1.3/OpenML/DESCRIPTION | 16 - OpenML-1.3/OpenML/MD5 | 159 +++++++++---------- OpenML-1.3/OpenML/NAMESPACE | 2 OpenML-1.3/OpenML/NEWS | 14 + OpenML-1.3/OpenML/R/OMLRun_Class.R | 14 - OpenML-1.3/OpenML/R/config.R | 2 OpenML-1.3/OpenML/R/convertMlrLearnerToOMLFlow.R | 2 OpenML-1.3/OpenML/R/convertOMLMeasuresToMlr.R | 1 OpenML-1.3/OpenML/R/convertOMLRunToBMR.R | 75 ++++---- OpenML-1.3/OpenML/R/convertOMLTaskToMlr.R | 3 OpenML-1.3/OpenML/R/download.R | 33 ++- OpenML-1.3/OpenML/R/downloadOMLObject.R | 29 ++- OpenML-1.3/OpenML/R/getOMLDataSet.R | 35 ++-- OpenML-1.3/OpenML/R/getOMLTask.R | 38 ++-- OpenML-1.3/OpenML/R/helpers.R | 112 ++++--------- OpenML-1.3/OpenML/R/listOMLDataSets.R | 14 + OpenML-1.3/OpenML/R/listOMLFlows.R | 2 OpenML-1.3/OpenML/R/listOMLRunEvaluations.R | 70 ++++++-- OpenML-1.3/OpenML/R/listOMLRuns.R | 2 OpenML-1.3/OpenML/R/listOMLTasks.R | 10 - OpenML-1.3/OpenML/R/runTaskFlow.R | 12 + OpenML-1.3/OpenML/R/runTaskMlr.R | 32 ++- OpenML-1.3/OpenML/R/xml_helpers.R | 31 --- OpenML-1.3/OpenML/R/zzz.R | 9 - OpenML-1.3/OpenML/build/vignette.rds |binary OpenML-1.3/OpenML/inst/CITATION |only OpenML-1.3/OpenML/inst/doc/OpenML.html |only OpenML-1.3/OpenML/inst/doc/OpenML.html.asis |only OpenML-1.3/OpenML/man/OMLDataSet.Rd | 1 OpenML-1.3/OpenML/man/OMLDataSetDescription.Rd | 1 OpenML-1.3/OpenML/man/OMLIOData.Rd | 1 OpenML-1.3/OpenML/man/clearOMLCache.Rd | 1 OpenML-1.3/OpenML/man/configuration.Rd | 3 OpenML-1.3/OpenML/man/convertMlrLearnerToOMLFlow.Rd | 1 OpenML-1.3/OpenML/man/convertMlrTaskToOMLDataSet.Rd | 1 OpenML-1.3/OpenML/man/convertOMLDataSetToMlr.Rd | 1 OpenML-1.3/OpenML/man/convertOMLFlowToMlr.Rd | 1 OpenML-1.3/OpenML/man/convertOMLMlrRunToBMR.Rd | 1 OpenML-1.3/OpenML/man/convertOMLRunToBMR.Rd | 1 OpenML-1.3/OpenML/man/convertOMLTaskToMlr.Rd | 1 OpenML-1.3/OpenML/man/deleteOMLObject.Rd | 11 - OpenML-1.3/OpenML/man/doAPICall.Rd | 1 OpenML-1.3/OpenML/man/downloadOMLObject.Rd | 1 OpenML-1.3/OpenML/man/getCachedOMLDataSetStatus.Rd | 1 OpenML-1.3/OpenML/man/getOMLConfig.Rd | 1 OpenML-1.3/OpenML/man/getOMLDataSet.Rd | 9 - OpenML-1.3/OpenML/man/getOMLDataSetQualities.Rd | 1 OpenML-1.3/OpenML/man/getOMLFlow.Rd | 1 OpenML-1.3/OpenML/man/getOMLRun.Rd | 1 OpenML-1.3/OpenML/man/getOMLRunParList.Rd | 1 OpenML-1.3/OpenML/man/getOMLSeedParList.Rd | 1 OpenML-1.3/OpenML/man/getOMLTask.Rd | 1 OpenML-1.3/OpenML/man/listOMLDataSetQualities.Rd | 1 OpenML-1.3/OpenML/man/listOMLDataSets.Rd | 18 +- OpenML-1.3/OpenML/man/listOMLEstimationProcedures.Rd | 1 OpenML-1.3/OpenML/man/listOMLEvaluationMeasures.Rd | 1 OpenML-1.3/OpenML/man/listOMLFlows.Rd | 11 - OpenML-1.3/OpenML/man/listOMLRunEvaluations.Rd | 8 OpenML-1.3/OpenML/man/listOMLRuns.Rd | 1 OpenML-1.3/OpenML/man/listOMLTaskTypes.Rd | 1 OpenML-1.3/OpenML/man/listOMLTasks.Rd | 4 OpenML-1.3/OpenML/man/loadOMLConfig.Rd | 1 OpenML-1.3/OpenML/man/makeOMLEstimationProcedure.Rd | 3 OpenML-1.3/OpenML/man/makeOMLFlow.Rd | 3 OpenML-1.3/OpenML/man/makeOMLFlowParameter.Rd | 3 OpenML-1.3/OpenML/man/makeOMLRun.Rd | 3 OpenML-1.3/OpenML/man/makeOMLRunParList.Rd | 3 OpenML-1.3/OpenML/man/makeOMLRunParameter.Rd | 3 OpenML-1.3/OpenML/man/makeOMLSeedParList.Rd | 3 OpenML-1.3/OpenML/man/makeOMLTask.Rd | 3 OpenML-1.3/OpenML/man/populateOMLCache.Rd | 1 OpenML-1.3/OpenML/man/runTaskFlow.Rd | 10 - OpenML-1.3/OpenML/man/runTaskMlr.Rd | 10 - OpenML-1.3/OpenML/man/saveOMLConfig.Rd | 1 OpenML-1.3/OpenML/man/setOMLConfig.Rd | 1 OpenML-1.3/OpenML/man/tagging.Rd | 11 - OpenML-1.3/OpenML/man/uploadOMLDataSet.Rd | 7 OpenML-1.3/OpenML/man/uploadOMLFlow.Rd | 1 OpenML-1.3/OpenML/man/uploadOMLRun.Rd | 7 OpenML-1.3/OpenML/vignettes/Bib.bib |only OpenML-1.3/OpenML/vignettes/OpenML.Rmd |only OpenML-1.3/OpenML/vignettes/OpenML.html.asis |only 85 files changed, 444 insertions(+), 437 deletions(-)
Title: Functions for Elementary Bayesian Inference
Description: A set of R functions and data sets for the book Introduction to Bayesian Statistics, Bolstad, W.M. (2017), John Wiley & Sons ISBN 978-1-118-09156-2.
Author: James Curran [aut, cre]
Maintainer: James Curran <j.curran@auckland.ac.nz>
Diff between Bolstad versions 0.2-33 dated 2016-04-06 and 0.2-34 dated 2017-03-30
Bolstad-0.2-33/Bolstad/man/median.Bolstad.Rd |only Bolstad-0.2-34/Bolstad/DESCRIPTION | 13 Bolstad-0.2-34/Bolstad/MD5 | 133 +-- Bolstad-0.2-34/Bolstad/NAMESPACE | 99 +- Bolstad-0.2-34/Bolstad/R/as.data.frame.Bolstad.R | 22 Bolstad-0.2-34/Bolstad/R/bayes.lin.reg.r | 744 +++++++++--------- Bolstad-0.2-34/Bolstad/R/bayes.lm.R | 368 ++++----- Bolstad-0.2-34/Bolstad/R/bayes.t.gibbs.R | 242 +++--- Bolstad-0.2-34/Bolstad/R/bayes.t.test.R | 788 ++++++++++---------- Bolstad-0.2-34/Bolstad/R/binobp.r | 208 ++--- Bolstad-0.2-34/Bolstad/R/binomixp.r | 392 ++++----- Bolstad-0.2-34/Bolstad/R/cdf.R | 60 - Bolstad-0.2-34/Bolstad/R/createPrior.R | 20 Bolstad-0.2-34/Bolstad/R/createPrior.default.R | 50 - Bolstad-0.2-34/Bolstad/R/median.Bolstad.R | 32 Bolstad-0.2-34/Bolstad/R/mvnmvnp.R | 176 ++-- Bolstad-0.2-34/Bolstad/R/normgcp.r | 430 +++++----- Bolstad-0.2-34/Bolstad/R/normmixp.r | 478 ++++++------ Bolstad-0.2-34/Bolstad/R/normnp.r | 266 +++--- Bolstad-0.2-34/Bolstad/R/nvaricp.r | 438 +++++------ Bolstad-0.2-34/Bolstad/R/poisgcp.r | 410 +++++----- Bolstad-0.2-34/Bolstad/R/print.Bolstad.R | 70 - Bolstad-0.2-34/Bolstad/R/print.sscamp.R | 54 - Bolstad-0.2-34/Bolstad/R/print.summary.Bolstad.R | 96 +- Bolstad-0.2-34/Bolstad/R/quantile.Bolstad.R | 38 Bolstad-0.2-34/Bolstad/R/sd.R | 88 +- Bolstad-0.2-34/Bolstad/R/sscsample.r | 374 ++++----- Bolstad-0.2-34/Bolstad/R/summary.Bolstad.R | 74 - Bolstad-0.2-34/Bolstad/R/var.R | 46 - Bolstad-0.2-34/Bolstad/man/Bolstad-package.Rd | 55 - Bolstad-0.2-34/Bolstad/man/IQR.Rd | 49 - Bolstad-0.2-34/Bolstad/man/as.data.frame.Bolstad.Rd | 33 Bolstad-0.2-34/Bolstad/man/bayes.lin.reg.Rd | 207 ++--- Bolstad-0.2-34/Bolstad/man/bayes.lm.Rd | 241 +++--- Bolstad-0.2-34/Bolstad/man/bayes.t.test.Rd | 262 +++--- Bolstad-0.2-34/Bolstad/man/bears.Rd | 97 +- Bolstad-0.2-34/Bolstad/man/binobp.Rd | 125 +-- Bolstad-0.2-34/Bolstad/man/binodp.Rd | 155 +-- Bolstad-0.2-34/Bolstad/man/binogcp.Rd | 189 ++-- Bolstad-0.2-34/Bolstad/man/binomixp.Rd | 163 ++-- Bolstad-0.2-34/Bolstad/man/cdf.Rd | 68 - Bolstad-0.2-34/Bolstad/man/createPrior.Rd | 41 - Bolstad-0.2-34/Bolstad/man/createPrior.default.Rd | 47 - Bolstad-0.2-34/Bolstad/man/decomp.Rd | 79 -- Bolstad-0.2-34/Bolstad/man/lines.Bolstad.Rd | 35 Bolstad-0.2-34/Bolstad/man/mean.Bolstad.Rd | 77 - Bolstad-0.2-34/Bolstad/man/mvnmvnp.Rd | 73 - Bolstad-0.2-34/Bolstad/man/normdp.Rd | 135 +-- Bolstad-0.2-34/Bolstad/man/normgcp.Rd | 249 +++--- Bolstad-0.2-34/Bolstad/man/normmixp.Rd | 135 +-- Bolstad-0.2-34/Bolstad/man/normnp.Rd | 133 +-- Bolstad-0.2-34/Bolstad/man/nvaricp.Rd | 117 +- Bolstad-0.2-34/Bolstad/man/plot.Bolstad.Rd | 133 +-- Bolstad-0.2-34/Bolstad/man/poisdp.Rd | 139 +-- Bolstad-0.2-34/Bolstad/man/poisgamp.Rd | 161 ++-- Bolstad-0.2-34/Bolstad/man/poisgcp.Rd | 217 ++--- Bolstad-0.2-34/Bolstad/man/print.Bolstad.Rd | 59 - Bolstad-0.2-34/Bolstad/man/print.sscsamp.Rd | 53 - Bolstad-0.2-34/Bolstad/man/quantile.Bolstad.Rd | 47 - Bolstad-0.2-34/Bolstad/man/sd.Bolstad.Rd | 85 +- Bolstad-0.2-34/Bolstad/man/sd.Rd | 33 Bolstad-0.2-34/Bolstad/man/sintegral.Rd | 129 +-- Bolstad-0.2-34/Bolstad/man/slug.Rd | 59 - Bolstad-0.2-34/Bolstad/man/sscsample.Rd | 117 +- Bolstad-0.2-34/Bolstad/man/sscsample.data.Rd | 55 - Bolstad-0.2-34/Bolstad/man/summary.Bolstad.Rd | 43 - Bolstad-0.2-34/Bolstad/man/var.Rd | 33 Bolstad-0.2-34/Bolstad/man/xdesign.Rd | 107 +- 68 files changed, 5206 insertions(+), 5238 deletions(-)
Title: Tools for Parsing and Generating XML Within R and S-Plus
Description: Many approaches for both reading and
creating XML (and HTML) documents (including DTDs), both local
and accessible via HTTP or FTP. Also offers access to an
'XPath' "interpreter".
Author: Duncan Temple Lang and the CRAN Team
Maintainer: Duncan Temple Lang <duncan@r-project.org>
Diff between XML versions 3.98-1.5 dated 2016-11-10 and 3.98-1.6 dated 2017-03-30
DESCRIPTION | 6 +++--- MD5 | 4 ++-- man/readHTMLTable.Rd | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-)