Mon, 10 Apr 2017

New package SeerMapperRegs with initial version 1.2.0
Package: SeerMapperRegs
Type: Package
Version: 1.2.0
Date: 2017-04-10
Title: Supplemental U. S. 2000 Census Tract Boundary for 15 States with Seer Registries for 'SeerMapper'
Author: "Jim Pearson" <jpearson@statnetconsulting.com> and "U. S. Census Bureau" <geo.tiger@census.gov>
Maintainer: "Jim Pearson" <jpearson@statnetconsulting.com>
Depends: R (>= 3.2.0)
Imports: sp
Suggests:
Description: Provides supplemental 2000 census tract boundaries for the 15 states containing Seer Registries for use with the 'SeerMapper' package. The data contained in this package is derived from U. S. Census data and is in the public domain.
License: GPL (>= 2)
LazyData: no
LazyLoad: no
BuildResaveData: yes
ByteCompile: yes
NeedsCompilation: no
Packaged: 2017-04-10 13:18:53 UTC; jpearson
Repository: CRAN
Date/Publication: 2017-04-10 22:34:48 UTC

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Package SCRSELECT updated to version 1.1-2 with previous version 1.1-1 dated 2017-04-07

Title: Performs Bayesian Variable Selection on the Covariates in a Semi-Competing Risks Model
Description: Contains four functions used in the DIC-tau_g procedure. SCRSELECT() and SCRSELECTRUN() uses Stochastic Search Variable Selection to select important covariates in the three hazard functions of a semi-competing risks model. These functions perform the Gibbs sampler for variable selection and a Metropolis-Hastings-Green sampler for the number of split points and parameters for the three baseline hazard function. The function SCRSELECT() returns the posterior sample of all quantities sampled in the Gibbs sampler after a burn-in period to a desired file location, while the function SCRSELECTRUN() returns posterior values of important quantities to the DIC-Tau_g procedure in a list. The function DICTAUG() returns a list containing the DIC values for the unique models visited by the DIC-Tau_g grid search. The function ReturnModel() uses SCRSELECTRUN() and DICTAUG() to return a summary of the posterior coefficient vectors for the optimal model along with saving this posterior sample to a desired path location.
Author: Andrew Chapple [aut, cre]
Maintainer: Andrew Chapple <Andrew.G.Chapple@rice.edu>

Diff between SCRSELECT versions 1.1-1 dated 2017-04-07 and 1.1-2 dated 2017-04-10

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New package D3GB with initial version 1.1
Package: D3GB
Type: Package
Version: 1.1
Date: 2017-04-10
Title: Interactive Genome Browser with R
Description: Creates interactive genome browser with 'R'. It joins the data analysis power of R and the visualization libraries of JavaScript in one package.
URL: http://d3gb.usal.es
License: CC BY-NC-SA 4.0
Depends: R (>= 3.0.0)
Imports: RSQLite (>= 1.0.0), DBI (>= 0.3.1), stats, utils
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Author: Carlos Prieto <cprietos@usal.es>, David Barrios <metal@usal.es>
Maintainer: Carlos Prieto <cprietos@usal.es>
Packaged: 2017-04-10 15:07:36 UTC; cprieto
Repository: CRAN
Date/Publication: 2017-04-10 22:29:14 UTC

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Package XiMpLe updated to version 0.10-1 with previous version 0.03-23 dated 2015-11-24

Title: A Simple XML Tree Parser and Generator
Description: Provides a simple XML tree parser/generator. It includes functions to read XML files into R objects, get information out of and into nodes, and write R objects back to XML code. It's not as powerful as the 'XML' package and doesn't aim to be, but for simple XML handling it could be useful. It was originally developed for the R GUI and IDE 'RKWard' <https://rkward.kde.org>, to make plugin development easier.
Author: Meik Michalke [aut, cre]
Maintainer: Meik Michalke <meik.michalke@hhu.de>

Diff between XiMpLe versions 0.03-23 dated 2015-11-24 and 0.10-1 dated 2017-04-10

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Package tuneR updated to version 1.3.2 with previous version 1.3.1 dated 2016-10-20

Title: Analysis of Music and Speech
Description: Analyze music and speech, extract features like MFCCs, handle wave files and their representation in various ways, read mp3, read midi, perform steps of a transcription, ... Also contains functions ported from the 'rastamat' 'Matlab' package.
Author: Uwe Ligges <ligges@statistik.tu-dortmund.de> with contributions from Sebastian Krey, Olaf Mersmann, Sarah Schnackenberg, Guillaume Guenard, Andrea Preusser, Anita Thieler, Johanna Mielke and Claus Weihs, as well as code fragments and ideas from the former package 'sound' by Matthias Heymann and functions from 'rastamat' by Daniel P. W. Ellis. The included parts of the libmad MPEG audio decoder library are authored by Underbit Technologies.
Maintainer: Uwe Ligges <ligges@statistik.tu-dortmund.de>

Diff between tuneR versions 1.3.1 dated 2016-10-20 and 1.3.2 dated 2017-04-10

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Package reactR updated to version 0.1.2 with previous version 0.1.0 dated 2016-11-05

Title: React Helpers
Description: Make it easy to use 'react' in R with helper dependency functions, embedded 'Babel' transpiler, and examples. Please note the separate 'react' BSD license <https://github.com/facebook/react/blob/master/LICENSE> when using 'react' in your projects.
Author: Facebook Inc [aut, cph] (React library in lib, https://facebook.github.io/react; see AUTHORS for full list of contributors), Kent Russell [aut, cre] (R interface)
Maintainer: Kent Russell <kent.russell@timelyportfolio.com>

Diff between reactR versions 0.1.0 dated 2016-11-05 and 0.1.2 dated 2017-04-10

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Package rbison updated to version 0.5.4 with previous version 0.5.0 dated 2016-10-05

Title: Interface to the 'USGS' 'BISON' 'API'
Description: Interface to the 'USGS' 'BISON' (<https://bison.usgs.gov/>) 'API', a 'database' for species occurrence data. Data comes from species in the United States from participating data providers. You can get data via 'taxonomic' and location based queries. A simple function is provided to help visualize data.
Author: Scott Chamberlain [aut, cre]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>

Diff between rbison versions 0.5.0 dated 2016-10-05 and 0.5.4 dated 2017-04-10

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New package lspline with initial version 1.0-0
Package: lspline
Type: Package
Title: Linear Splines with Convenient Parametrisations
Version: 1.0-0
Description: Linear splines with convenient parametrisations such that (1) coefficients are slopes of consecutive segments or (2) coefficients are slope changes at consecutive knots. Knots can be set manually or at break points of equal-frequency or equal-width intervals covering the range of 'x'. The implementation follows Greene (2003), chapter 7.2.5.
Suggests: testthat, knitr, rmarkdown, scales, ggplot2, broom
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Authors@R: c(person("Michal", "Bojanowski", role=c("aut", "cre"), email="michal2992@gmail.com"))
RoxygenNote: 6.0.1
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2017-04-10 20:49:24 UTC; mbojan
Author: Michal Bojanowski [aut, cre]
Maintainer: Michal Bojanowski <michal2992@gmail.com>
Repository: CRAN
Date/Publication: 2017-04-10 21:15:06 UTC

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Package GDINA updated to version 1.4.1 with previous version 1.2.1 dated 2017-02-12

Title: The Generalized DINA Model Framework
Description: A set of psychometric tools for cognitive diagnostic analyses for both dichotomous and polytomous responses. Various cognitive diagnosis models can be estimated, include the generalized deterministic inputs, noisy and gate (G-DINA) model by de la Torre (2011) <DOI:10.1007/s11336-011-9207-7>, the sequential G-DINA model by Ma and de la Torre (2016) <DOI:10.1111/bmsp.12070>, and many other models they subsume. Joint attribute distribution can be saturated, higher-order or structured. Q-matrix validation, item and model fit statistics, model comparison at test and item level and differential item functioning can also be conducted. A graphical user interface is also provided.
Author: Wenchao Ma [aut, cre], Jimmy de la Torre [aut]
Maintainer: Wenchao Ma <wenchao.ma@rutgers.edu>

Diff between GDINA versions 1.2.1 dated 2017-02-12 and 1.4.1 dated 2017-04-10

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Package timetools updated to version 1.11.4 with previous version 1.11.1 dated 2017-03-31

Title: Seasonal/Sequential (Instants/Durations, Even or not) Time Series
Description: Objects to manipulate sequential and seasonal time series. Sequential time series based on time instants and time durations are handled. Both can be regularly or unevenly spaced (overlapping durations are allowed). Only POSIX* format are used for dates and times. The following classes are provided : 'POSIXcti', 'POSIXctp', 'TimeIntervalDataFrame', 'TimeInstantDataFrame', 'SubtimeDataFrame' ; methods to switch from a class to another and to modify the time support of series (hourly time series to daily time series for instance) are also defined. Tools provided can be used for instance to handle environmental monitoring data (not always produced on a regular time base).
Author: Vladislav Navel
Maintainer: Vladislav Navel <vnavel@yahoo.fr>

Diff between timetools versions 1.11.1 dated 2017-03-31 and 1.11.4 dated 2017-04-10

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Package pcaL1 updated to version 1.5.1 with previous version 1.5 dated 2017-03-12

Title: L1-Norm PCA Methods
Description: Implementations of several methods for principal component analysis using the L1 norm. The package depends on COIN-OR Clp version >= 1.12.0. The methods implemented are PCA-L1 (Kwak 2008) <DOI:10.1109/TPAMI.2008.114>, L1-PCA (Ke and Kanade 2003, 2005) <DOI:10.1109/CVPR.2005.309>, L1-PCA* (Brooks, Dula, and Boone 2013) <DOI:10.1016/j.csda.2012.11.007>, L1-PCAhp (Visentin, Prestwich and Armagan 2016) <DOI:10.1007/978-3-319-46227-1_37>, wPCA (Park and Klabjan 2016), awPCA (Park and Klabjan 2016), PCA-Lp (Kwak 2014) <DOI:10.1109/TCYB.2013.2262936>, and SharpEl1-PCA (Brooks and Dula, submitted).
Author: Sapan Jot <sapan.madaan@gmail.com>, Paul Brooks <jpbrooks@vcu.edu>, Andrea Visentin <andrea.visentin@insight-centre.org>, Young Woong Park <ywpark@mail.smu.edu>, and Yi-Hui Zhou <yihui_zhou@ncsu.edu>
Maintainer: Paul Brooks <jpbrooks@vcu.edu>

Diff between pcaL1 versions 1.5 dated 2017-03-12 and 1.5.1 dated 2017-04-10

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Package DLMtool updated to version 3.2.3 with previous version 3.2.2 dated 2016-10-17

Title: Data-Limited Methods Toolkit
Description: Development, simulation testing, and implementation of management procedures for data-limited fisheries (see Carruthers et al (2014) <doi:10.1016/j.fishres.2013.12.014>).
Author: Tom Carruthers [aut, cre], Adrian Hordyk [aut]
Maintainer: Tom Carruthers <t.carruthers@fisheries.ubc.ca>

Diff between DLMtool versions 3.2.2 dated 2016-10-17 and 3.2.3 dated 2017-04-10

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 DLMtool-3.2.3/DLMtool/man/DLM_fease-class.Rd         |   89 
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Package REndo updated to version 1.2 with previous version 1.1 dated 2016-11-16

Title: Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables
Description: Fits linear models with endogenous regressor using latent instrumental variable approaches. The methods included in the package are Lewbel's (1997) <doi:10.2307/2171884> higher moments approach as well as Lewbel's (2012) <doi:10.1080/07350015.2012.643126> heteroskedasticity approach, Park and Gupta's (2012) <doi:10.1287/mksc.1120.0718>joint estimation method that uses Gaussian copula and Kim and Frees's (2007) <doi:10.1007/s11336-007-9008-1> multilevel generalized method of moment approach that deals with endogeneity in a multilevel setting. These are statistical techniques to address the endogeneity problem where no external instrumental variables are needed. This version: - solves an error occurring when using the multilevelIV() function with two levels, random intercept. - returns the AIC and BIC for copulaCorrection() (method 1) and latentIV() methods. - residuals and fitted values can be saved by users for latentIV() and copulaCorrection() methods. - improves the summary methods for copulaCorrection() and multilevelIV() functions.
Author: Raluca Gui, Markus Meierer, Rene Algesheimer
Maintainer: Raluca Gui <raluca.gui@business.uzh.ch>

Diff between REndo versions 1.1 dated 2016-11-16 and 1.2 dated 2017-04-10

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Package recmap updated to version 0.5.20 with previous version 0.5.16 dated 2017-01-15

Title: Compute the Rectangular Statistical Cartogram
Description: Provides an interface and a C++ implementation of the RecMap MP2 construction heuristic (see 'citation("recmap")' for details). This algorithm draws maps according to a given statistical value (e.g. election results, population or epidemiological data). The basic idea of the RecMap algorithm is that each map region (e.g. different countries) is represented by a rectangle. The area of each rectangle represents the statistical value given as input (maintain zero cartographic error). Documentation about RecMap is provided by a vignette included in this package.
Author: Christian Panse [aut, cre]
Maintainer: Christian Panse <Christian.Panse@gmail.com>

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Permanent link

Package doRNG updated to version 1.6.6 with previous version 1.6 dated 2014-03-07

Title: Generic Reproducible Parallel Backend for 'foreach' Loops
Description: Provides functions to perform reproducible parallel foreach loops, using independent random streams as generated by L'Ecuyer's combined multiple-recursive generator [L'Ecuyer (1999), <DOI:10.1287/opre.47.1.159>]. It enables to easily convert standard %dopar% loops into fully reproducible loops, independently of the number of workers, the task scheduling strategy, or the chosen parallel environment and associated foreach backend.
Author: Renaud Gaujoux
Maintainer: Renaud Gaujoux <renaud@tx.technion.ac.il>

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Package BUCSS updated to version 0.0.2 with previous version 0.0.1 dated 2016-12-13

Title: Bias and Uncertainty Corrected Sample Size
Description: Implements a method of correcting for publication bias and uncertainty when planning sample sizes in a future study from an original study. See Anderson, Kelley, & Maxwell (submitted, revised and resubmitted).
Author: Samantha F. Anderson <sander10@nd.edu>, Ken Kelley <kkelley@nd.edu>
Maintainer: Ken Kelley <kkelley@nd.edu>

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Package berryFunctions updated to version 1.15.0 with previous version 1.14.0 dated 2017-01-17

Title: Function Collection Related to Plotting and Hydrology
Description: Draw horizontal histograms, color scattered points by 3rd dimension, enhance date- and log-axis plots, zoom in X11 graphics, trace errors and warnings, use the unit hydrograph in a linear storage cascade, convert lists to data.frames and arrays, fit multiple functions.
Author: Berry Boessenkool
Maintainer: Berry Boessenkool <berry-b@gmx.de>

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More information about berryFunctions at CRAN
Permanent link

Package tlm updated to version 0.1.5 with previous version 0.1.4 dated 2016-05-04

Title: Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables
Description: Computation of effects under linear, logistic and Poisson regression models with transformed variables. Logarithm and power transformations are allowed. Effects can be displayed both numerically and graphically in both the original and the transformed space of the variables.
Author: Jose Barrera-Gomez and Xavier Basagana
Maintainer: Jose Barrera-Gomez <jose.barrera@isglobal.org>

Diff between tlm versions 0.1.4 dated 2016-05-04 and 0.1.5 dated 2017-04-10

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More information about tlm at CRAN
Permanent link

Package poppr updated to version 2.4.0 with previous version 2.3.0 dated 2016-11-23

Title: Genetic Analysis of Populations with Mixed Reproduction
Description: Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package.
Author: Zhian N. Kamvar [cre, aut], Javier F. Tabima [aut], Sydney E. Everhart [ctb, dtc], Jonah C. Brooks [aut], Stacy A. Krueger-Hadfield [ctb], Erik Sotka [ctb], Brian J. Knaus [ctb], Niklaus J. Grunwald [ths]
Maintainer: Zhian N. Kamvar <zkamvar@gmail.com>

Diff between poppr versions 2.3.0 dated 2016-11-23 and 2.4.0 dated 2017-04-10

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More information about poppr at CRAN
Permanent link

Package lexicon updated to version 0.3.1 with previous version 0.2.0 dated 2017-03-07

Title: Lexicons for Text Analysis
Description: A collection of lexical hash tables, dictionaries, and word lists.
Author: Tyler Rinker [aut, cre]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>

Diff between lexicon versions 0.2.0 dated 2017-03-07 and 0.3.1 dated 2017-04-10

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Permanent link

Package brainGraph updated to version 1.0.0 with previous version 0.72.0 dated 2016-10-10

Title: Graph Theory Analysis of Brain MRI Data
Description: A set of tools for performing graph theory analysis of brain MRI data. It is best suited to data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), but also works with e.g., tractography data from FSL and fMRI data from DPABI. It contains a graphical user interface for graph visualization and data exploration and several functions for generating useful figures.
Author: Christopher G. Watson <cgwatson@bu.edu>
Maintainer: Christopher G. Watson <cgwatson@bu.edu>

Diff between brainGraph versions 0.72.0 dated 2016-10-10 and 1.0.0 dated 2017-04-10

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New package rsolr with initial version 0.0.4
Package: rsolr
Type: Package
Title: R to Solr Interface
Version: 0.0.4
Author: Michael Lawrence, Gabe Becker, Jan Vogel
Maintainer: Michael Lawrence <michafla@gene.com>
Description: A comprehensive R API for querying Apache Solr databases. A Solr core is represented as a data frame or list that supports Solr-side filtering, sorting, transformation and aggregation, all through the familiar base R API. Queries are processed lazily, i.e., a query is only sent to the database when the data are required.
License: Apache License (== 2.0)
Imports: restfulr (>= 0.0.2), graph, S4Vectors (>= 0.7.18), rjson, XML, RCurl
Depends: R (>= 3.2.0), BiocGenerics (>= 0.15.1), methods
Suggests: nycflights13, RUnit, MASS
Collate: utils.R pminmax.R Context-class.R DocCollection-class.R Expression-class.R Facets-class.R FieldInfo-class.R FieldType-class.R Promise-class.R SolrExpression-class.R SolrQuery-class.R SolrSchema-class.R SolrCore-class.R SolrResult-class.R SolrSummary-class.R Solr-class.R SolrList-class.R SolrFrame-class.R SolrPromise-class.R GroupedSolrFrame-class.R test.R zzz.R
NeedsCompilation: yes
Packaged: 2017-04-10 09:36:09 UTC; michafla
Repository: CRAN
Date/Publication: 2017-04-10 12:50:49 UTC

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Package RchivalTag updated to version 0.0.3 with previous version 0.0.2 dated 2017-03-24

Title: Analyzing Archival Tagging Data
Description: A set of functions to generate, access and analyze standard data products from archival tagging data.
Author: Robert Bauer
Maintainer: Robert Bauer <robert.bauer@ird.fr>

Diff between RchivalTag versions 0.0.2 dated 2017-03-24 and 0.0.3 dated 2017-04-10

 ChangeLog               |    3 +++
 DESCRIPTION             |    8 ++++----
 MD5                     |   10 +++++-----
 R/plot_TS.r             |   12 ++++++++----
 R/read_PDT.r            |    7 ++++---
 inst/doc/RchivalTag.pdf |binary
 6 files changed, 24 insertions(+), 16 deletions(-)

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New package CausalImpact with initial version 1.2.0
Package: CausalImpact
Title: Inferring Causal Effects using Bayesian Structural Time-Series Models
Date: 2017-04-06
Author: Kay H. Brodersen <kbrodersen@google.com>, Alain Hauser <alhauser@google.com>
Maintainer: Alain Hauser <alhauser@google.com>
URL: https://google.github.io/CausalImpact/
Description: Implements a Bayesian approach to causal impact estimation in time series, as described in Brodersen et al. (2015) <DOI:10.1214/14-AOAS788>. See the package documentation on GitHub <https://google.github.io/CausalImpact/> to get started.
Copyright: Copyright (C) 2014-2017 Google, Inc.
Version: 1.2.0
VignetteBuilder: knitr
License: Apache License 2.0 | file LICENSE
Imports: assertthat, Boom, dplyr, ggplot2, zoo
Depends: bsts
Suggests: knitr, testthat
NeedsCompilation: no
Packaged: 2017-04-10 08:32:06 UTC; husi
Repository: CRAN
Date/Publication: 2017-04-10 12:59:47 UTC

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Package WWR updated to version 1.1.0 with previous version 1.0.0 dated 2017-02-11

Title: Weighted Win Loss Statistics and their Variances
Description: Calculate the (weighted) win loss statistics including the win ratio, win difference and win product and their variances, with which the p-values are also calculated. The variance estimation is based on Luo et al. (2015) <doi:10.1111/biom.12225> and Luo et al. (2017) <doi:10.1002/sim.7284>. This package also calculates general win loss statistics with user-specified win loss function with variance estimation based on Bebu and Lachin (2016) <doi:10.1093/biostatistics/kxv032>.
Author: Xiaodong Luo [aut, cre], Junshan Qiu [ctb], Steven Bai [ctb], Hong Tian [ctb], Mike Mikailov [ctb], Sanofi [cph]
Maintainer: Xiaodong Luo <Xiaodong.Luo@sanofi.com>

Diff between WWR versions 1.0.0 dated 2017-02-11 and 1.1.0 dated 2017-04-10

 WWR-1.0.0/WWR/src/WWR_Prog.f90   |only
 WWR-1.1.0/WWR/DESCRIPTION        |   18 ++-
 WWR-1.1.0/WWR/MD5                |   23 ++---
 WWR-1.1.0/WWR/NAMESPACE          |   18 +--
 WWR-1.1.0/WWR/R/genwr.R          |only
 WWR-1.1.0/WWR/R/winratio.R       |   62 +++++++------
 WWR-1.1.0/WWR/R/wwratio.R        |   11 +-
 WWR-1.1.0/WWR/build/partial.rdb  |binary
 WWR-1.1.0/WWR/man/WWR-package.Rd |    4 
 WWR-1.1.0/WWR/man/genwr.Rd       |only
 WWR-1.1.0/WWR/man/winratio.Rd    |  169 ++++++++++++++++++------------------
 WWR-1.1.0/WWR/man/wlogr2.Rd      |  103 +++++++++++-----------
 WWR-1.1.0/WWR/man/wwratio.Rd     |  179 +++++++++++++++++++--------------------
 WWR-1.1.0/WWR/src/Prog.f90       |only
 WWR-1.1.0/WWR/src/WWR_init.c     |only
 15 files changed, 305 insertions(+), 282 deletions(-)

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Package RODBCext updated to version 0.3.0 with previous version 0.2.7 dated 2016-09-24

Title: Parameterized Queries Extension for RODBC
Description: An extension for RODBC package adding support for parameterized queries.
Author: Mateusz Zoltak [aut, cre], Brian Ripley [aut], Michael Lapsley [aut], Will Beasley [ctb], Juergen Altfeld [ctb]
Maintainer: Mateusz Zoltak <zozlak@zozlak.org>

Diff between RODBCext versions 0.2.7 dated 2016-09-24 and 0.3.0 dated 2017-04-10

 DESCRIPTION                             |   27 
 MD5                                     |   42 -
 NAMESPACE                               |    2 
 NEWS                                    |   15 
 R/odbcFetchRows.R                       |   79 +-
 R/odbcGetQueryTimeout.R                 |only
 R/odbcSetQueryTimeout.R                 |only
 R/odbcValidChannel.R                    |   46 -
 R/sqlExecute.R                          |  376 ++++++------
 R/sqlFetchMore.R                        |   79 +-
 R/sqlPrepare.R                          |   52 +
 build/vignette.rds                      |binary
 inst/doc/Parameterized_SQL_queries.Rmd  |  977 +++++++++++++++-----------------
 inst/doc/Parameterized_SQL_queries.html |   57 +
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 man/sqlExecute.Rd                       |   11 
 man/sqlPrepare.Rd                       |   11 
 src/RODBC.c                             |   17 
 src/RODBCext.c                          |   98 ++-
 src/RODBCext.h                          |    3 
 tests                                   |only
 vignettes/Parameterized_SQL_queries.Rmd |  977 +++++++++++++++-----------------
 23 files changed, 1521 insertions(+), 1348 deletions(-)

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New package partools with initial version 1.1.6
Package: partools
Version: 1.1.6
Author: Norm Matloff <normmatloff@gmail.com> [cre,aut], Clark Fitzgerald <clarkfitzg@gmail.com> [aut], with contributions by Alex Rumbaugh <aprumbaugh@ucdavis.edu> and Hadley Wickham <h.wickham@gmail.com>
Maintainer: Norm Matloff <normmatloff@gmail.com>
Title: Tools for the 'Parallel' Package
Description: Miscellaneous utilities for parallelizing large computations. Alternative to MapReduce. File splitting and distributed operations such as sort and aggregate. "Software Alchemy" method for parallelizing most statistical methods, presented in N. Matloff, Parallel Computation for Data Science, Chapman and Hall, 2015. Includes a debugging aid.
Depends: regtools,parallel,stats,utils,data.table,pdist,methods
Suggests: rpart,e1071,testthat
ByteCompile: yes
NeedsCompilation: no
License: GPL (>= 2)
URL: https://github.com/matloff/partools
BugReports: https://github.com/matloff/partools/issues
Packaged: 2017-04-10 05:17:39 UTC; nm
Repository: CRAN
Date/Publication: 2017-04-10 09:16:20 UTC

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Package easySdcTable updated to version 0.3.0 with previous version 0.2.1 dated 2017-02-16

Title: Easy Interface to the Statistical Disclosure Control Package 'sdcTable'
Description: The main function, ProtectTable(), performs table suppression according to a frequency rule with a data set as the only required input. Within this function, protectTable(), protectLinkedTables() or runArgusBatchFile() in package 'sdcTable' is called. Lists of level-hierarchy (parameter 'dimList') and other required input to these functions are created automatically. The function, PTgui(), starts a graphical user interface based on the shiny package.
Author: Øyvind Langsrud
Maintainer: Øyvind Langsrud <oyl@ssb.no>

Diff between easySdcTable versions 0.2.1 dated 2017-02-16 and 0.3.0 dated 2017-04-10

 DESCRIPTION                        |   19 +++----
 MD5                                |   32 ++++++-----
 NAMESPACE                          |    9 +++
 R/PTwrap.R                         |only
 R/ProtectTable.R                   |   99 +++++++++++++++++++++++++++++++++----
 R/ProtectTable1.R                  |   70 ++++++++++++++++++++++----
 R/PtGui.R                          |only
 build/vignette.rds                 |binary
 inst/doc/easySdcTableVignette.R    |   11 ++++
 inst/doc/easySdcTableVignette.Rmd  |   20 +++++++
 inst/doc/easySdcTableVignette.html |   15 +++++
 man/EasyData.Rd                    |    1 
 man/IncDefault.Rd                  |    1 
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 man/PTwrap.Rd                      |only
 man/ProtectTable.Rd                |   49 ++++++++++++++++--
 man/ProtectTable1.Rd               |   13 ++--
 man/sosialFiktiv.Rd                |    1 
 vignettes/easySdcTableVignette.Rmd |   20 +++++++
 19 files changed, 301 insertions(+), 59 deletions(-)

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Package clickstream updated to version 1.2.0 with previous version 1.1.9 dated 2016-10-14

Title: Analyzes Clickstreams Based on Markov Chains
Description: A set of tools to read, analyze and write lists of click sequences on websites (i.e., clickstream). A click can be represented by a number, character or string. Clickstreams can be modeled as zero- (only computes occurrence probabilities), first- or higher-order Markov chains.
Author: Michael Scholz
Maintainer: Michael Scholz <michael.scholz@uni-passau.de>

Diff between clickstream versions 1.1.9 dated 2016-10-14 and 1.2.0 dated 2017-04-10

 DESCRIPTION                        |   15 +++----
 MD5                                |   57 ++++++++++++++-------------
 NAMESPACE                          |    6 ++
 NEWS                               |    7 +++
 R/MarkovChain.r                    |   76 ++++++++++++++++++++++++++++++++++++-
 R/clickstream-package.R            |    6 +-
 man/MarkovChain-class.Rd           |   13 ++----
 man/Pattern-class.Rd               |   21 ++++------
 man/absorbingStates-methods.Rd     |   11 ++---
 man/as.transactions.Rd             |   12 ++---
 man/clickstream-package.Rd         |   28 +++++--------
 man/clusterClickstreams.Rd         |   48 +++++++++++------------
 man/fitMarkovChain.Rd              |   75 +++++++++++++++++-------------------
 man/frequencies.Rd                 |   15 ++-----
 man/hmPlot-methods.Rd              |only
 man/predict-methods.Rd             |   51 +++++++++++++-----------
 man/predict.ClickstreamClusters.Rd |   31 +++++++--------
 man/print.ClickstreamClusters.Rd   |   20 ++++-----
 man/print.Clickstreams.Rd          |   13 ++----
 man/print.MarkovChainSummary.Rd    |   14 +++---
 man/randomClicks-methods.Rd        |   29 +++++++-------
 man/randomClickstreams.Rd          |   29 +++++++-------
 man/readClickstreams.Rd            |   32 +++++++--------
 man/show-methods.Rd                |    9 ++--
 man/states-methods.Rd              |   10 ++--
 man/summary-methods.Rd             |   25 +++++-------
 man/summary.ClickstreamClusters.Rd |   21 ++++------
 man/summary.Clickstreams.Rd        |   14 ++----
 man/transientStates-methods.Rd     |   12 ++---
 man/writeClickstreams.Rd           |   28 ++++++-------
 30 files changed, 400 insertions(+), 328 deletions(-)

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