Title: Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header
Files
Description: Provided within is a high quality and fast PPRNG that is able to be used in an 'OpenMP' parallel
environment compiled under either C++98 or C++11. The objective of this package release is to consolidate
the distribution of the 'sitmo' library on CRAN by enabling others to link to the 'sitmo' header file instead
of including a copy of 'sitmo' within their individual package. Lastly, the package contains example
implementations using 'sitmo' and three accompanying vignette that provide additional information.
Author: James Balamuta [aut, cre, cph],
Thijs van den Berg [aut, cph]
Maintainer: James Balamuta <balamut2@illinois.edu>
Diff between sitmo versions 1.1.0 dated 2017-04-28 and 1.2.0 dated 2017-06-25
sitmo-1.1.0/sitmo/src/init.c |only sitmo-1.2.0/sitmo/DESCRIPTION | 16 sitmo-1.2.0/sitmo/MD5 | 36 sitmo-1.2.0/sitmo/NEWS.md | 17 sitmo-1.2.0/sitmo/R/RcppExports.R | 16 sitmo-1.2.0/sitmo/R/inline-plugin.R |only sitmo-1.2.0/sitmo/README.md | 73 sitmo-1.2.0/sitmo/inst/doc/big_crush_test.R | 3779 ----------------- sitmo-1.2.0/sitmo/inst/doc/big_crush_test.html | 6 sitmo-1.2.0/sitmo/inst/doc/sitmo_internals.R | 258 - sitmo-1.2.0/sitmo/inst/doc/sitmo_internals.Rmd | 50 sitmo-1.2.0/sitmo/inst/doc/sitmo_internals.html | 31 sitmo-1.2.0/sitmo/inst/doc/uniform_rng_with_sitmo.Rmd | 18 sitmo-1.2.0/sitmo/inst/doc/uniform_rng_with_sitmo.html | 22 sitmo-1.2.0/sitmo/man/runif_sitmo.Rd | 2 sitmo-1.2.0/sitmo/man/sitmo-package.Rd | 3 sitmo-1.2.0/sitmo/src/RcppExports.cpp | 16 sitmo-1.2.0/sitmo/src/sitmo_runif.cpp | 2 sitmo-1.2.0/sitmo/vignettes/sitmo_internals.Rmd | 50 sitmo-1.2.0/sitmo/vignettes/uniform_rng_with_sitmo.Rmd | 18 20 files changed, 276 insertions(+), 4137 deletions(-)
Title: Power Normal Distribution
Description: Miscellaneous functions for a descriptive analysis and
initial inference for the power parameter of the the Power
Normal (PN) distribution. This miscellaneous will be extend
for more distributions into the power family and the
three-parameter model.
Author: Gualberto Segundo Agamez Montalvo, Marcia D'Elia Branco
Maintainer: Gualberto Segundo Agamez Montalvo <gsagamez@gmail.com>
Diff between PowerNormal versions 1.0.0 dated 2017-06-04 and 1.1.0 dated 2017-06-25
DESCRIPTION | 6 +++--- MD5 | 24 ++++++++++++------------ NAMESPACE | 14 ++++++++++++-- R/GerarPN.R | 2 +- R/ICpn.R | 10 ++++------ R/biespn.R | 10 ++++------ R/densitypn.R | 4 ++-- R/estimatepn.R | 2 +- R/histogrampn.R | 2 +- R/linespn.R | 4 ++-- R/utils.R | 4 ++-- man/pn.CI.Rd | 8 +++----- man/pn.bias.Rd | 7 +++---- 13 files changed, 50 insertions(+), 47 deletions(-)
Title: R Interface to 'TensorFlow'
Description: Interface to 'TensorFlow' <https://www.tensorflow.org/>,
an open source software library for numerical computation using data
flow graphs. Nodes in the graph represent mathematical operations,
while the graph edges represent the multidimensional data arrays
(tensors) communicated between them. The flexible architecture allows
you to deploy computation to one or more 'CPUs' or 'GPUs' in a desktop,
server, or mobile device with a single 'API'. 'TensorFlow' was originally
developed by researchers and engineers working on the Google Brain Team
within Google's Machine Intelligence research organization for the
purposes of conducting machine learning and deep neural networks research,
but the system is general enough to be applicable in a wide variety
of other domains as well.
Author: JJ Allaire [aut, cre],
RStudio [cph, fnd],
Yuan Tang [aut, cph],
Dirk Eddelbuettel [ctb, cph],
Nick Golding [ctb, cph],
Google Inc. [ctb, cph] (Examples and Tutorials)
Maintainer: JJ Allaire <jj@rstudio.com>
Diff between tensorflow versions 0.8.1 dated 2017-05-25 and 0.9 dated 2017-06-25
DESCRIPTION | 24 +++++++++++------------- MD5 | 14 ++++++++------ NAMESPACE | 3 +++ R/install.R | 22 ++++++++++------------ R/package.R | 18 ++++++++++++++++++ R/tensorboard.R |only R/utils.R | 4 ++++ man/tensorboard.Rd |only man/tf_config.Rd | 3 +++ 9 files changed, 57 insertions(+), 31 deletions(-)
Title: Uncertainty Analysis for Species Distribution Models
Description: This is a framework that aims to provide methods and tools for assessing the impact of different sources of uncertainties (e.g.positional uncertainty) on performance of species distribution models (SDMs).)
Author: Babak Naimi
Maintainer: Babak Naimi <naimi.b@gmail.com>
Diff between usdm versions 1.1-15 dated 2015-08-01 and 1.1-18 dated 2017-06-25
DESCRIPTION | 12 - MD5 | 19 + R/exclude.R | 5 R/vif.R | 512 ++++++++++++++++++++++++++-------------------------- inst/CITATION |only man/Variogram.Rd | 122 ++++++------ man/exclude.Rd | 162 ++++++++-------- man/lisa.Rd | 211 +++++++++++---------- man/speciesLisa.Rd | 157 ++++++++------- man/usdm-package.Rd | 51 ++--- man/vif.Rd | 168 ++++++++--------- 11 files changed, 736 insertions(+), 683 deletions(-)
Title: A Novel Topology-Based Pathway Enrichment Analysis Approach
Description: We described a novel Topology-based pathway enrichment analysis, which integrated the global position of the nodes and the topological property of the pathways in Kyoto Encyclopedia of Genes and Genomes Database.
We also provide some functions to obtain the latest information about pathways to finish pathway enrichment analysis using this method.
Author: Wei Jiang
Maintainer: Wei Jiang <jiangwei@hrbmu.edu.cn>
Diff between TPEA versions 3.0.1 dated 2017-06-14 and 3.1.0 dated 2017-06-25
TPEA-3.0.1/TPEA/data/datalist |only TPEA-3.1.0/TPEA/DESCRIPTION | 8 ++++---- TPEA-3.1.0/TPEA/MD5 | 27 +++++++++++++-------------- TPEA-3.1.0/TPEA/R/AUEC.R | 2 +- TPEA-3.1.0/TPEA/R/TPEA.R | 6 +++--- TPEA-3.1.0/TPEA/data/all_genes.rda |binary TPEA-3.1.0/TPEA/data/gene2ec.rda |binary TPEA-3.1.0/TPEA/data/gene2ko.rda |binary TPEA-3.1.0/TPEA/data/keggGene2gene.rda |binary TPEA-3.1.0/TPEA/data/node_gene.rda |binary TPEA-3.1.0/TPEA/data/num_node_gene_score.rda |binary TPEA-3.1.0/TPEA/data/pathway_names.rda |binary TPEA-3.1.0/TPEA/man/AUEC.Rd | 2 +- TPEA-3.1.0/TPEA/man/TPEA.Rd | 4 ++-- TPEA-3.1.0/TPEA/man/num_node_gene_score.Rd | 2 +- 15 files changed, 25 insertions(+), 26 deletions(-)
Title: Test Analysis Modules
Description:
Includes marginal maximum likelihood estimation of uni- and
multidimensional item response models (Rasch, 2PL, 3PL,
Generalized Partial Credit, Multi Facets,
Nominal Item Response, Structured Latent Class Analysis,
Mixture Distribution IRT Models, Located Latent Class Models)
and joint maximum likelihood estimation for models
from the Rasch family.
Latent regression models and plausible value imputation are
also supported.
Author:
Alexander Robitzsch [aut, cre], Thomas Kiefer [aut], Margaret Wu [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between TAM versions 2.2-49 dated 2017-06-17 and 2.3-18 dated 2017-06-25
DESCRIPTION | 13 MD5 | 68 ++-- NAMESPACE | 5 R/IRT.data.tam.R | 2 R/IRT.frequencies.tam.R |only R/RcppExports.R | 22 - R/add.colnames.resp.R | 13 R/designMatrices.mfr_aux2.R | 45 +- R/print.tam.linking.R |only R/print.tam_linking_2studies.R |only R/tam.latreg.R | 27 - R/tam.linking.R | 16 - R/tam.mml.3pl.R | 4 R/tam.mml.R | 19 - R/tam.mml.mfr.R | 19 - R/tam_evaluate_prior.R | 24 - R/tam_linking_2studies.R | 15 R/tam_linking_2studies_create_M_SD.R |only R/tam_linking_2studies_create_M_SD_rownames.R |only R/tam_linking_extract_parameters.R | 20 - R/tam_linking_extract_parameters_trait_distribution.R |only R/tam_linking_output_summary.R | 32 +- R/tam_linking_parameters_select_common_items.R | 2 R/tam_mml_3pl_calc_exp.R | 2 R/tam_mml_3pl_computeB.R | 24 - R/tam_mml_3pl_mstep_item_slopes.R | 6 R/tam_mml_compute_deviance.R | 1 R/tam_mml_control_list_define.R | 10 R/tam_mml_mstep_intercept.R | 91 +---- R/tam_mml_mstep_intercept_optim.R |only R/tam_mml_mstep_intercept_quasi_newton_R.R |only R/tam_prior_eval_log_density_one_parameter.R | 17 - README.md |only inst/NEWS | 24 + man/IRT.frequencies.tam.Rd |only man/tam.latreg.Rd | 5 man/tam.linking.Rd | 53 ++- src/RcppExports.cpp | 280 +++++++++--------- src/init.c | 20 - src/tam_mml_3pl_helper_functions.cpp | 14 40 files changed, 492 insertions(+), 401 deletions(-)
Title: 'Pubmed' Word Clouds
Description: Create a word cloud using the abstract of publications from 'Pubmed'.
Author: Felix Yanhui Fan <nolanfyh@gmail.com>
Maintainer: Felix Yanhui Fan <nolanfyh@gmail.com>
Diff between PubMedWordcloud versions 0.3.3 dated 2017-01-16 and 0.3.4 dated 2017-06-25
PubMedWordcloud-0.3.3/PubMedWordcloud/README.md |only PubMedWordcloud-0.3.4/PubMedWordcloud/DESCRIPTION | 10 ++--- PubMedWordcloud-0.3.4/PubMedWordcloud/MD5 | 19 ++++------ PubMedWordcloud-0.3.4/PubMedWordcloud/R/cleanAbstracts.R | 8 ++-- PubMedWordcloud-0.3.4/PubMedWordcloud/man/cleanAbstracts.Rd | 3 - PubMedWordcloud-0.3.4/PubMedWordcloud/man/colSets.Rd | 1 PubMedWordcloud-0.3.4/PubMedWordcloud/man/editPMIDs.Rd | 1 PubMedWordcloud-0.3.4/PubMedWordcloud/man/getAbstracts.Rd | 1 PubMedWordcloud-0.3.4/PubMedWordcloud/man/getPMIDs.Rd | 1 PubMedWordcloud-0.3.4/PubMedWordcloud/man/getPMIDsByKeyWords.Rd | 1 PubMedWordcloud-0.3.4/PubMedWordcloud/man/plotWordCloud.Rd | 1 11 files changed, 19 insertions(+), 27 deletions(-)
More information about PubMedWordcloud at CRAN
Permanent link
Title: Photobiological Calculations
Description: Definitions of classes, methods, operators and functions for use in
photobiology and radiation meteorology and climatology. Calculation of
effective (weighted) and not-weighted irradiances/doses, fluence rates,
transmittance, reflectance, absorptance, absorbance and diverse
ratios and other derived quantities from spectral data. Local maxima and
minima. Conversion between energy- and photon-based units. Wavelength
interpolation. Astronomical calculations related solar angles and day
length. Colours and vision.
Author: Pedro J. Aphalo [aut, cre],
Titta K. Kotilainen [ctb]
Maintainer: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>
Diff between photobiology versions 0.9.15 dated 2017-04-29 and 0.9.16 dated 2017-06-25
photobiology-0.9.15/photobiology/man/color.Rd |only photobiology-0.9.16/photobiology/DESCRIPTION | 16 photobiology-0.9.16/photobiology/MD5 | 141 +- photobiology-0.9.16/photobiology/NAMESPACE | 21 photobiology-0.9.16/photobiology/NEWS | 18 photobiology-0.9.16/photobiology/R/beesxyz.data.R | 4 photobiology-0.9.16/photobiology/R/cieillum.data.R | 14 photobiology-0.9.16/photobiology/R/ciexyz.data.R | 42 photobiology-0.9.16/photobiology/R/color.of.R |only photobiology-0.9.16/photobiology/R/filter.data.R | 29 photobiology-0.9.16/photobiology/R/head-tail.R |only photobiology-0.9.16/photobiology/R/leaf.data.R | 7 photobiology-0.9.16/photobiology/R/led.data.R | 12 photobiology-0.9.16/photobiology/R/meeus.R | 10 photobiology-0.9.16/photobiology/R/photobiology.R | 4 photobiology-0.9.16/photobiology/R/response.data.R | 23 photobiology-0.9.16/photobiology/R/s.e.irrad2rgb.R | 2 photobiology-0.9.16/photobiology/R/spct.classes.r | 5 photobiology-0.9.16/photobiology/R/spct.insert.spct.hinges.R | 1 photobiology-0.9.16/photobiology/R/spct.new.R | 4 photobiology-0.9.16/photobiology/R/spct.tag.R | 4 photobiology-0.9.16/photobiology/R/sun.calc.r | 696 +++++----- photobiology-0.9.16/photobiology/R/sun.data.R | 28 photobiology-0.9.16/photobiology/R/w.length.range2rgb.R | 10 photobiology-0.9.16/photobiology/R/waveband.class.R | 155 -- photobiology-0.9.16/photobiology/README.md | 2 photobiology-0.9.16/photobiology/data/ccd.spct.rda |binary photobiology-0.9.16/photobiology/data/photodiode.spct.rda |binary photobiology-0.9.16/photobiology/inst/doc/userguide1-intro.Rmd | 2 photobiology-0.9.16/photobiology/inst/doc/userguide1-intro.html | 8 photobiology-0.9.16/photobiology/inst/doc/userguide2-radiation.R | 6 photobiology-0.9.16/photobiology/inst/doc/userguide2-radiation.Rmd | 12 photobiology-0.9.16/photobiology/inst/doc/userguide2-radiation.html | 380 ++--- photobiology-0.9.16/photobiology/inst/doc/userguide3-astronomy.R | 102 + photobiology-0.9.16/photobiology/inst/doc/userguide3-astronomy.Rmd | 182 +- photobiology-0.9.16/photobiology/inst/doc/userguide3-astronomy.html | 334 +++- photobiology-0.9.16/photobiology/man/A.illuminant.spct.Rd | 9 photobiology-0.9.16/photobiology/man/D65.illuminant.spct.Rd | 9 photobiology-0.9.16/photobiology/man/beesxyzCMF.spct.Rd | 3 photobiology-0.9.16/photobiology/man/black_body.spct.Rd | 2 photobiology-0.9.16/photobiology/man/ccd.spct.Rd | 15 photobiology-0.9.16/photobiology/man/check_spct.Rd | 4 photobiology-0.9.16/photobiology/man/ciev10.spct.Rd | 7 photobiology-0.9.16/photobiology/man/ciev2.spct.Rd | 7 photobiology-0.9.16/photobiology/man/ciexyzCC10.spct.Rd | 7 photobiology-0.9.16/photobiology/man/ciexyzCC2.spct.Rd | 7 photobiology-0.9.16/photobiology/man/ciexyzCMF10.spct.Rd | 7 photobiology-0.9.16/photobiology/man/ciexyzCMF2.spct.Rd | 7 photobiology-0.9.16/photobiology/man/clear.spct.Rd | 9 photobiology-0.9.16/photobiology/man/clear_body.spct.Rd | 2 photobiology-0.9.16/photobiology/man/color_of.Rd |only photobiology-0.9.16/photobiology/man/day_night.Rd | 71 - photobiology-0.9.16/photobiology/man/filter_cps.mspct.Rd | 2 photobiology-0.9.16/photobiology/man/green_leaf.spct.Rd | 9 photobiology-0.9.16/photobiology/man/head_tail.Rd |only photobiology-0.9.16/photobiology/man/merge.generic_spct.Rd | 4 photobiology-0.9.16/photobiology/man/opaque.spct.Rd | 24 photobiology-0.9.16/photobiology/man/photobiology-package.Rd | 4 photobiology-0.9.16/photobiology/man/photodiode.spct.Rd | 10 photobiology-0.9.16/photobiology/man/polyester.spct.Rd | 9 photobiology-0.9.16/photobiology/man/s_e_irrad2rgb.Rd | 2 photobiology-0.9.16/photobiology/man/sun.daily.data.Rd | 9 photobiology-0.9.16/photobiology/man/sun.daily.spct.Rd | 9 photobiology-0.9.16/photobiology/man/sun.data.Rd | 9 photobiology-0.9.16/photobiology/man/sun.spct.Rd | 9 photobiology-0.9.16/photobiology/man/sun_angles.Rd | 45 photobiology-0.9.16/photobiology/man/white_body.spct.Rd | 2 photobiology-0.9.16/photobiology/man/white_led.cps_spct.Rd | 6 photobiology-0.9.16/photobiology/man/white_led.raw_spct.Rd | 7 photobiology-0.9.16/photobiology/man/white_led.source_spct.Rd | 6 photobiology-0.9.16/photobiology/man/yellow_gel.spct.Rd | 9 photobiology-0.9.16/photobiology/vignettes/userguide1-intro.Rmd | 2 photobiology-0.9.16/photobiology/vignettes/userguide2-radiation.Rmd | 12 photobiology-0.9.16/photobiology/vignettes/userguide3-astronomy.Rmd | 182 +- 74 files changed, 1650 insertions(+), 1161 deletions(-)
Title: Producing and Reproducing Results
Description: A system for embedded scientific computing and reproducible research with R.
The OpenCPU server exposes a simple but powerful HTTP api for RPC and data interchange
with R. This provides a reliable and scalable foundation for statistical services or
building R web applications. The OpenCPU server runs either as a single-user development
server within the interactive R session, or as a multi-user Linux stack based on Apache2.
The entire system is fully open source and permissively licensed. The OpenCPU website
has detailed documentation and example apps.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between opencpu versions 2.0.2 dated 2017-06-17 and 2.0.3 dated 2017-06-25
DESCRIPTION | 18 +++++++------ MD5 | 57 +++++++++++++++++++++---------------------- NEWS | 12 +++++++++ R/apps.R | 8 +++--- R/email.R | 12 +++++++-- R/evaluate.R | 7 ++++- R/execute_function.R | 1 R/httpget.R | 3 +- R/httpget_apps.R | 7 +++++ R/httpget_library.R | 13 +++++++-- R/httpget_object.R | 34 ++++++++++++++++++++++++- R/httpget_session_warnings.R | 6 ++-- R/httpget_tmp.R | 7 +++++ R/init.R | 6 ---- R/locks.R | 1 R/multipart.R | 15 +++++++++++ R/parse_arg.R | 9 ++---- R/parse_arg_prim.R | 10 +++---- R/parse_dots.R | 2 - R/parse_post.R | 39 +++++++++++++++++++++-------- R/rapache.R | 32 +++++++++--------------- R/request.R | 3 ++ R/rookhandler.R | 11 ++------ R/serve.R | 4 +-- R/start.R | 23 ++++++++++------- R/utils.R | 38 +++++++++++++++++++++------- data |only inst/config/defaults.conf | 4 +-- inst/doc/opencpu-paper.pdf |binary man/server.Rd | 17 ++++++------ 30 files changed, 261 insertions(+), 138 deletions(-)
Title: Security Standards Data Sets
Description: Provides functions for security standards data management. It comes with data frames of 1000 observations for each security standard and updates are possible from official sources to build updated data sets.
Author: Humbert Costas [aut, cre],
Arnau Sangra [ctb]
Maintainer: Humbert Costas <humbert.costas@gmail.com>
Diff between net.security versions 0.1.0 dated 2017-04-01 and 0.3.0 dated 2017-06-25
net.security-0.1.0/net.security/data/cpes.sample.R |only net.security-0.1.0/net.security/data/cves.sample.R |only net.security-0.1.0/net.security/inst/img |only net.security-0.3.0/net.security/DESCRIPTION | 6 net.security-0.3.0/net.security/MD5 | 39 net.security-0.3.0/net.security/NAMESPACE | 12 net.security-0.3.0/net.security/R/capec.R |only net.security-0.3.0/net.security/R/cpe.R | 201 +-- net.security-0.3.0/net.security/R/cve.R | 896 +++++++------- net.security-0.3.0/net.security/R/cvss.R |only net.security-0.3.0/net.security/R/cwe.R |only net.security-0.3.0/net.security/R/public.R | 130 +- net.security-0.3.0/net.security/R/sysdata.rda |binary net.security-0.3.0/net.security/README.md | 80 - net.security-0.3.0/net.security/data/capec.sample.rda |only net.security-0.3.0/net.security/data/cpes.sample.rda |binary net.security-0.3.0/net.security/data/cves.sample.rda |binary net.security-0.3.0/net.security/data/cwes.sample.rda |only net.security-0.3.0/net.security/inst/tmpdata |only net.security-0.3.0/net.security/man/DataSetList.Rd | 40 net.security-0.3.0/net.security/man/DataSetStatus.Rd | 58 net.security-0.3.0/net.security/man/DataSetUpdate.Rd | 82 - net.security-0.3.0/net.security/man/GetDataFrame.Rd | 46 net.security-0.3.0/net.security/tests/testthat/test_cve.R | 108 - net.security-0.3.0/net.security/tests/testthat/test_cwe.R |only 25 files changed, 920 insertions(+), 778 deletions(-)
More information about leaflet.extras at CRAN
Permanent link
Title: Significance Brackets for 'ggplot2'
Description: Enrich your 'ggplots' with group-wise comparisons.
This package provides an easy way to indicate if two groups are significantly different.
Commonly this is shown by a bracket on top connecting the groups of interest which itself is annotated with the level of significance (NS, *, **, ***).
The package provides a single layer (geom_signif()) that takes the groups for comparison and the test (t.test(), wilcox.text() etc.) as arguments and adds the annotation
to the plot.
Author: Constantin Ahlmann-Eltze [aut, cre]
Maintainer: Constantin Ahlmann-Eltze <artjom31415@googlemail.com>
Diff between ggsignif versions 0.2.0 dated 2017-04-26 and 0.3.0 dated 2017-06-25
DESCRIPTION | 14 +- MD5 | 34 ++++-- NEWS.md | 4 R/significance_annotation.R | 144 ++++++++++++++++---------- README.md | 44 +++++-- inst/doc/intro.R | 10 - inst/doc/intro.Rmd | 19 +-- inst/doc/intro.html | 22 +-- man/stat_signif.Rd | 31 ++++- tests/testthat/Rplots.pdf |binary tests/testthat/test-significance_annotation.R | 34 +++++- tools |only vignettes/intro.Rmd | 19 +-- 13 files changed, 250 insertions(+), 125 deletions(-)
Title: Bayesian Measurement Models for Analyzing Endorsement
Experiments
Description: Fit the hierarchical and non-hierarchical Bayesian measurement models proposed by Bullock, Imai, and Shapiro (2011) <DOI:10.1093/pan/mpr031> to analyze endorsement experiments. Endorsement experiments are a survey methodology for eliciting truthful responses to sensitive questions. This methodology is helpful when measuring support for socially sensitive political actors such as militant groups. The model is fitted with a Markov chain Monte Carlo algorithm and produces the output containing draws from the posterior distribution.
Author: Yuki Shiraito [aut, cre], Kosuke Imai [aut], Bryn Rosenfeld [ctb]
Maintainer: Yuki Shiraito <shiraito@princeton.edu>
Diff between endorse versions 1.5.2 dated 2017-04-18 and 1.6.0 dated 2017-06-25
ChangeLog | 1 DESCRIPTION | 8 +++--- MD5 | 21 +++++++++------- NAMESPACE | 8 ++++-- R/GeoID.R |only R/endorse.R | 55 ++++++++++++++++++++++++++++++++++++++++++++ man/GeoCount.Rd | 18 +++++++------- man/GeoId.Rd |only man/endorse.Rd | 61 +++++++++++++++++++++++++++++-------------------- man/endorse.plot.Rd | 3 +- man/predict.endorse.Rd |only src/geodist.c | 36 ++++++++++++++++++++++++++++ src/init.c | 7 +++++ 13 files changed, 168 insertions(+), 50 deletions(-)
Title: Robust PCA by Projection Pursuit
Description: Provides functions for robust PCA by projection pursuit.
Author: Peter Filzmoser, Heinrich Fritz, Klaudius Kalcher
Maintainer: Valentin Todorov <valentin.todorov@chello.at>
Diff between pcaPP versions 1.9-61 dated 2016-10-10 and 1.9-70 dated 2017-06-25
ChangeLog | 16 ++++++++++++---- DESCRIPTION | 8 ++++---- MD5 | 8 +++++--- src/smat.base.h | 7 +++++-- tests |only 5 files changed, 26 insertions(+), 13 deletions(-)
More information about RegularizedSCA at CRAN
Permanent link
Title: Accesses Google Maps APIs to Retrieve Data and Plot Maps
Description: Provides a mechanism to plot a Google Map from R and overlay
it with shapes and markers. Also provides access to Google Maps APIs,
including places, directions, roads, distances, geocoding, elevation and
timezone.
Author: David Cooley [aut, cre],
Paulo Barcelos [ctb] (Author of c++ decode_pl),
Rstudio [ctb] (Functions written for the Leaflet pacakge)
Maintainer: David Cooley <dcooley@symbolix.com.au>
Diff between googleway versions 2.0.0 dated 2017-05-01 and 2.2.0 dated 2017-06-25
googleway-2.0.0/googleway/man/LogicalCheck.Rd |only googleway-2.0.0/googleway/man/SetDefault.Rd |only googleway-2.0.0/googleway/man/check_for_columns.Rd |only googleway-2.0.0/googleway/man/check_hex_colours.Rd |only googleway-2.0.0/googleway/man/check_opacities.Rd |only googleway-2.0.0/googleway/man/constructURL.Rd |only googleway-2.0.0/googleway/man/find_lat_column.Rd |only googleway-2.0.0/googleway/man/find_lon_column.Rd |only googleway-2.0.0/googleway/man/latitude_column.Rd |only googleway-2.0.0/googleway/man/longitude_column.Rd |only googleway-2.0.0/googleway/man/objPolygonCoords.Rd |only googleway-2.0.0/googleway/man/objPolylineCoords.Rd |only googleway-2.0.0/googleway/man/objectColumns.Rd |only googleway-2.2.0/googleway/DESCRIPTION | 8 googleway-2.2.0/googleway/MD5 | 112 - googleway-2.2.0/googleway/NAMESPACE | 4 googleway-2.2.0/googleway/R/google_directions.R | 4 googleway-2.2.0/googleway/R/google_distance.R | 21 googleway-2.2.0/googleway/R/google_elevation.R | 2 googleway-2.2.0/googleway/R/google_geocode.R | 2 googleway-2.2.0/googleway/R/google_map.R | 33 googleway-2.2.0/googleway/R/google_map_layers.R | 253 +++ googleway-2.2.0/googleway/R/google_place_autocomplete.R | 2 googleway-2.2.0/googleway/R/google_place_details.R | 2 googleway-2.2.0/googleway/R/google_places.R | 3 googleway-2.2.0/googleway/R/google_reverse_geocode.R | 2 googleway-2.2.0/googleway/R/google_roads.R | 6 googleway-2.2.0/googleway/R/google_timezone.R | 2 googleway-2.2.0/googleway/R/google_utilities.R | 36 googleway-2.2.0/googleway/R/googleway-package.R | 11 googleway-2.2.0/googleway/R/methods_polyline.R | 36 googleway-2.2.0/googleway/R/parameter_checks.R | 121 - googleway-2.2.0/googleway/R/scratch.R | 753 ---------- googleway-2.2.0/googleway/inst/doc/googleway-vignette.Rmd | 48 googleway-2.2.0/googleway/inst/doc/googleway-vignette.html | 52 googleway-2.2.0/googleway/inst/htmlwidgets/google_map.js | 107 + googleway-2.2.0/googleway/man/add_circles.Rd | 5 googleway-2.2.0/googleway/man/add_fusion.Rd |only googleway-2.2.0/googleway/man/add_heatmap.Rd | 6 googleway-2.2.0/googleway/man/add_kml.Rd |only googleway-2.2.0/googleway/man/add_markers.Rd | 31 googleway-2.2.0/googleway/man/add_overlay.Rd |only googleway-2.2.0/googleway/man/add_polygons.Rd | 5 googleway-2.2.0/googleway/man/add_polylines.Rd | 5 googleway-2.2.0/googleway/man/add_rectangles.Rd | 5 googleway-2.2.0/googleway/man/clear.Rd | 3 googleway-2.2.0/googleway/man/google_directions.Rd | 4 googleway-2.2.0/googleway/man/google_distance.Rd | 20 googleway-2.2.0/googleway/man/google_elevation.Rd | 2 googleway-2.2.0/googleway/man/google_geocode.Rd | 2 googleway-2.2.0/googleway/man/google_map-shiny.Rd | 2 googleway-2.2.0/googleway/man/google_map.Rd | 20 googleway-2.2.0/googleway/man/google_map_update.Rd | 2 googleway-2.2.0/googleway/man/google_nearestRoads.Rd | 2 googleway-2.2.0/googleway/man/google_place_autocomplete.Rd | 2 googleway-2.2.0/googleway/man/google_place_details.Rd | 2 googleway-2.2.0/googleway/man/google_places.Rd | 2 googleway-2.2.0/googleway/man/google_reverse_geocode.Rd | 2 googleway-2.2.0/googleway/man/google_snapToRoads.Rd | 2 googleway-2.2.0/googleway/man/google_speedLimits.Rd | 2 googleway-2.2.0/googleway/man/google_timezone.Rd | 2 googleway-2.2.0/googleway/tests/testthat/test-google_distances.R | 64 googleway-2.2.0/googleway/tests/testthat/test-google_map.R | 8 googleway-2.2.0/googleway/tests/testthat/test-google_map_layers.R | 22 googleway-2.2.0/googleway/vignettes/googleway-vignette.Rmd | 48 65 files changed, 755 insertions(+), 1135 deletions(-)
Title: Fuzzy Linear Programming
Description: Provides methods to solve Fuzzy Linear Programming Problems with
fuzzy constraints (following different approaches proposed by
Verdegay, Zimmermann, Werners and Tanaka), fuzzy costs, and fuzzy
technological matrix.
Author: Carlos A. Rabelo [aut, cre],
Pablo J. Villacorta [ctb]
Maintainer: Carlos A. Rabelo <carabelo@gmail.com>
Diff between FuzzyLP versions 0.1-3 dated 2015-07-08 and 0.1-4 dated 2017-06-25
FuzzyLP-0.1-3/FuzzyLP/build |only FuzzyLP-0.1-3/FuzzyLP/inst/doc/FuzzyLP.pdf.asis |only FuzzyLP-0.1-3/FuzzyLP/vignettes |only FuzzyLP-0.1-4/FuzzyLP/DESCRIPTION | 22 FuzzyLP-0.1-4/FuzzyLP/MD5 | 27 FuzzyLP-0.1-4/FuzzyLP/NAMESPACE | 38 - FuzzyLP-0.1-4/FuzzyLP/R/CosFuz.R | 831 ++++++++++++------------ FuzzyLP-0.1-4/FuzzyLP/R/GenFuz.R | 296 ++++---- FuzzyLP-0.1-4/FuzzyLP/man/FCLP.Beta.Rd | 163 ++-- FuzzyLP-0.1-4/FuzzyLP/man/FCLP.Obj.Rd | 257 +++---- FuzzyLP-0.1-4/FuzzyLP/man/FOLP_Ordering.Rd | 179 ++--- FuzzyLP-0.1-4/FuzzyLP/man/FOLP_Posib.Rd | 122 +-- FuzzyLP-0.1-4/FuzzyLP/man/FOLP_Repres.Rd | 230 +++--- FuzzyLP-0.1-4/FuzzyLP/man/FuzzyLP.Rd | 42 - FuzzyLP-0.1-4/FuzzyLP/man/GFLP.Rd | 182 ++--- FuzzyLP-0.1-4/FuzzyLP/man/crispLP.Rd | 89 +- 16 files changed, 1248 insertions(+), 1230 deletions(-)
Title: Cognitive Diagnosis Modeling
Description: Functions for cognitive diagnosis modeling
and multidimensional item response modeling for
dichotomous and polytomous data. This package
enables the estimation of the DINA and DINO model,
the multiple group (polytomous) GDINA model,
the multiple choice DINA model, the general diagnostic
model (GDM), the multidimensional linear compensatory
item response model and the structured latent class
model (SLCA).
Author: Alexander Robitzsch [aut, cre], Thomas Kiefer [aut],
Ann Cathrice George [aut], Ali Uenlue [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between CDM versions 5.6-16 dated 2017-06-17 and 5.7-16 dated 2017-06-25
DESCRIPTION | 9 +-- MD5 | 28 ++++++--- NAMESPACE | 8 ++ R/IRT.data.R | 2 R/IRT.frequencies.R |only R/IRT_frequencies_default.R |only R/RcppExports.R | 2 R/bivariate_table_statistics.R |only R/chisq_compute.R |only R/expand_matrix.R |only R/slca.R | 37 ++++-------- R/univar_table_statistics.R |only README.md |only inst/NEWS | 16 ++++- man/IRT.frequencies.Rd |only man/ideal.response.pattern.Rd | 4 - src/RcppExports.cpp | 107 ++++++++++++++++++------------------ src/din.deterministic.devcrit_c.cpp | 8 -- src/irt_predict_c.cpp | 5 - 19 files changed, 119 insertions(+), 107 deletions(-)
Title: Miscellaneous Basic Functions
Description: A collection of miscellaneous functions for
copying objects to the clipboard ('Copy');
manipulating strings ('concat', 'mgsub', 'trim', 'verlan');
loading or showing packages ('library_with_dep', 'require_with_dep',
'sessionPackages');
creating or testing for named lists ('nlist', 'as.nlist', 'is.nlist'),
formulas ('is.formula'), empty objects ('as.empty', 'is.empty'),
whole numbers ('as.wholenumber', 'is.wholenumber');
testing for equality ('almost.equal', 'almost.zero');
getting modified versions of usual functions ('rle2', 'sumNA');
making a pause or a stop ('pause', 'stopif');
and others ('erase', '%nin%', 'unwhich').
Author: Paul Poncet [aut, cre]
Maintainer: Paul Poncet <paulponcet@yahoo.fr>
Diff between bazar versions 0.1.4 dated 2017-01-14 and 0.1.6 dated 2017-06-25
DESCRIPTION | 12 ++++----- MD5 | 56 +++++++++++++++++++++++----------------------- NEWS.md | 16 ++++++++++--- R/concat.R | 6 +++- R/mgsub.R | 2 - R/nlist.R | 1 README.md | 2 - man/Copy.Rd | 1 man/almost.equal.Rd | 1 man/almost.zero.Rd | 1 man/as.empty.Rd | 3 -- man/bazar.Rd | 1 man/concat.Rd | 1 man/grapes-nin-grapes.Rd | 1 man/is.empty.Rd | 3 -- man/is.formula.Rd | 1 man/is.wholenumber.Rd | 3 -- man/library_with_dep.Rd | 1 man/mgsub.Rd | 7 ++--- man/nlist.Rd | 3 -- man/pause.Rd | 1 man/rle2.Rd | 1 man/sessionPackages.Rd | 1 man/stopif.Rd | 1 man/sumNA.Rd | 1 man/trim.Rd | 1 man/unwhich.Rd | 1 man/verlan.Rd | 1 tests/testthat/test-nin.R | 4 +-- 29 files changed, 63 insertions(+), 71 deletions(-)
Title: Bayesian Inference for Marketing/Micro-Econometrics
Description: Covers many important models used
in marketing and micro-econometrics applications.
The package includes:
Bayes Regression (univariate or multivariate dep var),
Bayes Seemingly Unrelated Regression (SUR),
Binary and Ordinal Probit,
Multinomial Logit (MNL) and Multinomial Probit (MNP),
Multivariate Probit,
Negative Binomial (Poisson) Regression,
Multivariate Mixtures of Normals (including clustering),
Dirichlet Process Prior Density Estimation with normal base,
Hierarchical Linear Models with normal prior and covariates,
Hierarchical Linear Models with a mixture of normals prior and covariates,
Hierarchical Multinomial Logits with a mixture of normals prior
and covariates,
Hierarchical Multinomial Logits with a Dirichlet Process prior and covariates,
Hierarchical Negative Binomial Regression Models,
Bayesian analysis of choice-based conjoint data,
Bayesian treatment of linear instrumental variables models,
Analysis of Multivariate Ordinal survey data with scale
usage heterogeneity (as in Rossi et al, JASA (01)),
Bayesian Analysis of Aggregate Random Coefficient Logit Models as in BLP (see
Jiang, Manchanda, Rossi 2009)
For further reference, consult our book, Bayesian Statistics and
Marketing by Rossi, Allenby and McCulloch (Wiley 2005) and Bayesian Non- and Semi-Parametric
Methods and Applications (Princeton U Press 2014).
Author: Peter Rossi <perossichi@gmail.com>
Maintainer: Peter Rossi <perossichi@gmail.com>
Diff between bayesm versions 3.0-2 dated 2015-06-20 and 3.1-0 dated 2017-06-25
bayesm-3.0-2/bayesm/R/rcppexports.r |only bayesm-3.0-2/bayesm/man/fsh.Rd |only bayesm-3.0-2/bayesm/src/rcppexports.cpp |only bayesm-3.1-0/bayesm/DESCRIPTION | 15 bayesm-3.1-0/bayesm/MD5 | 269 +++--- bayesm-3.1-0/bayesm/NAMESPACE | 54 - bayesm-3.1-0/bayesm/R/BayesmConstants.R | 4 bayesm-3.1-0/bayesm/R/RcppExports.R |only bayesm-3.1-0/bayesm/R/clusterMix_rcpp.R | 118 +- bayesm-3.1-0/bayesm/R/createX.R | 142 +-- bayesm-3.1-0/bayesm/R/llmnp.R | 161 ++-- bayesm-3.1-0/bayesm/R/plot.bayesm.hcoef.R | 90 +- bayesm-3.1-0/bayesm/R/plot.bayesm.mat.R | 118 +- bayesm-3.1-0/bayesm/R/rbayesBLP_rcpp.R | 6 bayesm-3.1-0/bayesm/R/rbiNormGibbs.R | 234 ++--- bayesm-3.1-0/bayesm/R/rbprobitgibbs_rcpp.r | 11 bayesm-3.1-0/bayesm/R/rdpgibbs_rcpp.r | 344 ++++---- bayesm-3.1-0/bayesm/R/rhierBinLogit.R | 22 bayesm-3.1-0/bayesm/R/rhierLinearMixture_rcpp.r | 434 +++++----- bayesm-3.1-0/bayesm/R/rhierLinearModel_rcpp.R | 394 +++++---- bayesm-3.1-0/bayesm/R/rhierMnlDP_rcpp.r | 595 +++++++------- bayesm-3.1-0/bayesm/R/rhierMnlRwMixture_rcpp.r | 599 ++++++++------- bayesm-3.1-0/bayesm/R/rhiernegbinrw_rcpp.r | 40 - bayesm-3.1-0/bayesm/R/rivDP_rcpp.R | 557 ++++++------- bayesm-3.1-0/bayesm/R/rivGibbs_rcpp.R | 320 ++++---- bayesm-3.1-0/bayesm/R/rmnlIndepMetrop_rcpp.R | 272 +++--- bayesm-3.1-0/bayesm/R/rmnpgibbs_rcpp.r | 258 +++--- bayesm-3.1-0/bayesm/R/rmvpgibbs_rcpp.r | 244 +++--- bayesm-3.1-0/bayesm/R/rnegbinrw_rcpp.r | 318 ++++--- bayesm-3.1-0/bayesm/R/rnmixgibbs_rcpp.r | 346 ++++---- bayesm-3.1-0/bayesm/R/rordprobitgibbs_rcpp.r | 364 ++++----- bayesm-3.1-0/bayesm/R/rscaleusage_rcpp.r | 3 bayesm-3.1-0/bayesm/R/rsurgibbs_rcpp.r | 324 ++++---- bayesm-3.1-0/bayesm/R/runireg_rcpp.r | 234 ++--- bayesm-3.1-0/bayesm/R/runireggibbs_rcpp.r | 236 ++--- bayesm-3.1-0/bayesm/build |only bayesm-3.1-0/bayesm/data/camera.RData |only bayesm-3.1-0/bayesm/inst/doc |only bayesm-3.1-0/bayesm/inst/include/bayesm.h | 22 bayesm-3.1-0/bayesm/man/Scotch.Rd | 151 +-- bayesm-3.1-0/bayesm/man/bank.Rd | 200 ++--- bayesm-3.1-0/bayesm/man/breg.Rd | 137 +-- bayesm-3.1-0/bayesm/man/camera.Rd |only bayesm-3.1-0/bayesm/man/cgetC.Rd | 70 - bayesm-3.1-0/bayesm/man/cheese.Rd | 120 +-- bayesm-3.1-0/bayesm/man/clusterMix.Rd | 120 +-- bayesm-3.1-0/bayesm/man/condMom.Rd | 104 +- bayesm-3.1-0/bayesm/man/createX.Rd | 116 +- bayesm-3.1-0/bayesm/man/customerSat.Rd | 49 - bayesm-3.1-0/bayesm/man/detailing.Rd | 233 ++--- bayesm-3.1-0/bayesm/man/eMixMargDen.Rd | 100 +- bayesm-3.1-0/bayesm/man/ghkvec.Rd | 77 - bayesm-3.1-0/bayesm/man/llmnl.Rd | 91 +- bayesm-3.1-0/bayesm/man/llmnp.Rd | 121 +-- bayesm-3.1-0/bayesm/man/llnhlogit.Rd | 132 +-- bayesm-3.1-0/bayesm/man/lndIChisq.Rd | 85 +- bayesm-3.1-0/bayesm/man/lndIWishart.Rd | 91 +- bayesm-3.1-0/bayesm/man/lndMvn.Rd | 88 +- bayesm-3.1-0/bayesm/man/lndMvst.Rd | 93 +- bayesm-3.1-0/bayesm/man/logMargDenNR.Rd | 38 bayesm-3.1-0/bayesm/man/margarine.Rd | 268 +++--- bayesm-3.1-0/bayesm/man/mixDen.Rd | 96 +- bayesm-3.1-0/bayesm/man/mixDenBi.Rd | 105 +- bayesm-3.1-0/bayesm/man/mnlHess.Rd | 44 - bayesm-3.1-0/bayesm/man/mnpProb.Rd | 97 +- bayesm-3.1-0/bayesm/man/momMix.Rd | 99 +- bayesm-3.1-0/bayesm/man/nmat.Rd | 74 - bayesm-3.1-0/bayesm/man/numEff.Rd | 88 +- bayesm-3.1-0/bayesm/man/orangeJuice.Rd | 298 +++---- bayesm-3.1-0/bayesm/man/plot.bayesm.hcoef.Rd | 82 -- bayesm-3.1-0/bayesm/man/plot.bayesm.mat.Rd | 99 +- bayesm-3.1-0/bayesm/man/plot.bayesm.nmix.Rd | 98 +- bayesm-3.1-0/bayesm/man/rDPGibbs.Rd | 406 ++++------ bayesm-3.1-0/bayesm/man/rbayesBLP.Rd | 256 +++--- bayesm-3.1-0/bayesm/man/rbiNormGibbs.Rd | 79 - bayesm-3.1-0/bayesm/man/rbprobitGibbs.Rd | 173 ++-- bayesm-3.1-0/bayesm/man/rdirichlet.Rd | 74 - bayesm-3.1-0/bayesm/man/rhierBinLogit.Rd | 245 +++--- bayesm-3.1-0/bayesm/man/rhierLinearMixture.Rd | 236 +++-- bayesm-3.1-0/bayesm/man/rhierLinearModel.Rd | 174 ++-- bayesm-3.1-0/bayesm/man/rhierMnlDP.Rd | 341 +++----- bayesm-3.1-0/bayesm/man/rhierMnlRwMixture.Rd | 308 ++++--- bayesm-3.1-0/bayesm/man/rhierNegbinRw.Rd | 189 ++-- bayesm-3.1-0/bayesm/man/rivDP.Rd | 360 ++++----- bayesm-3.1-0/bayesm/man/rivGibbs.Rd | 154 ++- bayesm-3.1-0/bayesm/man/rmixGibbs.Rd | 85 -- bayesm-3.1-0/bayesm/man/rmixture.Rd | 80 +- bayesm-3.1-0/bayesm/man/rmnlIndepMetrop.Rd | 152 ++- bayesm-3.1-0/bayesm/man/rmnpGibbs.Rd | 178 ++-- bayesm-3.1-0/bayesm/man/rmultireg.Rd | 173 ++-- bayesm-3.1-0/bayesm/man/rmvpGibbs.Rd | 242 +++--- bayesm-3.1-0/bayesm/man/rmvst.Rd | 81 -- bayesm-3.1-0/bayesm/man/rnegbinRw.Rd | 229 ++--- bayesm-3.1-0/bayesm/man/rnmixGibbs.Rd | 245 +++--- bayesm-3.1-0/bayesm/man/rordprobitGibbs.Rd | 236 +++-- bayesm-3.1-0/bayesm/man/rscaleUsage.Rd | 187 ++-- bayesm-3.1-0/bayesm/man/rsurGibbs.Rd | 206 ++--- bayesm-3.1-0/bayesm/man/rtrun.Rd | 86 +- bayesm-3.1-0/bayesm/man/runireg.Rd | 151 ++- bayesm-3.1-0/bayesm/man/runiregGibbs.Rd | 157 ++- bayesm-3.1-0/bayesm/man/rwishart.Rd | 99 +- bayesm-3.1-0/bayesm/man/simnhlogit.Rd | 71 - bayesm-3.1-0/bayesm/man/summary.bayesm.mat.Rd | 87 +- bayesm-3.1-0/bayesm/man/summary.bayesm.nmix.Rd | 80 +- bayesm-3.1-0/bayesm/man/summary.bayesm.var.Rd | 81 -- bayesm-3.1-0/bayesm/man/tuna.Rd | 141 +-- bayesm-3.1-0/bayesm/src/Makevars.win | 2 bayesm-3.1-0/bayesm/src/RcppExports.cpp |only bayesm-3.1-0/bayesm/src/bayesBLP_rcpp_loop.cpp | 10 bayesm-3.1-0/bayesm/src/cgetC_rcpp.cpp | 2 bayesm-3.1-0/bayesm/src/lndIWishart_rcpp.cpp | 8 bayesm-3.1-0/bayesm/src/lndMvst_rcpp.cpp | 8 bayesm-3.1-0/bayesm/src/rDPGibbs_rcpp_loop.cpp | 6 bayesm-3.1-0/bayesm/src/rbprobitGibbs_rcpp_loop.cpp | 4 bayesm-3.1-0/bayesm/src/rdirichlet_rcpp.cpp | 4 bayesm-3.1-0/bayesm/src/rhierLinearMixture_rcpp_loop.cpp | 4 bayesm-3.1-0/bayesm/src/rhierLinearModel_rcpp_loop.cpp | 6 bayesm-3.1-0/bayesm/src/rhierMnlDP_rcpp_loop.cpp | 28 bayesm-3.1-0/bayesm/src/rhierMnlRwMixture_rcpp_loop.cpp | 160 +++- bayesm-3.1-0/bayesm/src/rhierNegbinRw_rcpp_loop.cpp | 6 bayesm-3.1-0/bayesm/src/rivDP_rcpp_loop.cpp | 196 ++-- bayesm-3.1-0/bayesm/src/rivgibbs_rcpp_loop.cpp | 8 bayesm-3.1-0/bayesm/src/rmixGibbs_rcpp.cpp | 6 bayesm-3.1-0/bayesm/src/rmnlIndepMetrop_rcpp_loop.cpp | 4 bayesm-3.1-0/bayesm/src/rmnpGibbs_rcpp_loop.cpp | 7 bayesm-3.1-0/bayesm/src/rmultireg_rcpp.cpp | 4 bayesm-3.1-0/bayesm/src/rmvpGibbs_rcpp_loop.cpp | 7 bayesm-3.1-0/bayesm/src/rmvst_rcpp.cpp | 4 bayesm-3.1-0/bayesm/src/rnegbinRw_rcpp_loop.cpp | 2 bayesm-3.1-0/bayesm/src/rnmixGibbs_rcpp_loop.cpp | 2 bayesm-3.1-0/bayesm/src/rscaleUsage_rcpp_loop.cpp | 34 bayesm-3.1-0/bayesm/src/rsurGibbs_rcpp_loop.cpp | 4 bayesm-3.1-0/bayesm/src/runiregGibbs_rcpp_loop.cpp | 4 bayesm-3.1-0/bayesm/src/runireg_rcpp_loop.cpp | 4 bayesm-3.1-0/bayesm/src/rwishart_rcpp.cpp | 4 bayesm-3.1-0/bayesm/src/trunNorm.cpp |only bayesm-3.1-0/bayesm/src/utilityFunctions.cpp | 30 bayesm-3.1-0/bayesm/vignettes |only 138 files changed, 8787 insertions(+), 8635 deletions(-)