Title: Weighted Linear Fixed Effects Regression Models for Causal
Inference
Description: Provides a computationally efficient way of fitting
weighted linear fixed effects estimators for causal
inference with various weighting schemes. Weighted linear
fixed effects estimators can be used to estimate the
average treatment effects under different identification
strategies. This includes stratified randomized
experiments, matching and stratification for
observational studies, first differencing, and
difference-in-differences. The package implements methods
described in Imai and Kim (2017) "When should We Use
Linear Fixed Effects Regression Models for Causal
Inference with Longitudinal Data?", available at
<https://imai.princeton.edu/research/FEmatch.html>.
Author: In Song Kim [aut, cre],
Kosuke Imai [aut],
Erik Wang [aut]
Maintainer: In Song Kim <insong@mit.edu>
Diff between wfe versions 1.3 dated 2014-08-11 and 1.6 dated 2017-07-18
Changelog | 3 DESCRIPTION | 53 MD5 | 19 NAMESPACE | 16 R/functions.R | 65 R/pwfe.R | 9 R/wfe.R | 3080 +++++++++++++------------- man/pwfe.Rd | 18 man/wfe.Rd | 105 src/wfe.c | 6752 +++++++++++++++++++++++++++++++-------------------------- src/wfe_init.c |only 11 files changed, 5522 insertions(+), 4598 deletions(-)
Title: Cardinal to Ordinal Number Conversion
Description: Language specific cardinal to ordinal number conversion.
Author: Damian W. Betebenner [aut, cre],
Andrew Martin [ctb],
Jeff Erickson [ctb]
Maintainer: Damian W. Betebenner <dbetebenner@nciea.org>
Diff between toOrdinal versions 0.0-6 dated 2016-03-06 and 1.0-0.0 dated 2017-07-18
DESCRIPTION | 24 ++++++++++--------- MD5 | 26 +++++++++++++-------- NAMESPACE | 2 + R/toOrdinal.R | 17 +++++++++---- R/zzz.R | 7 ++--- build |only inst/CITATION | 14 +++++------ inst/NEWS | 39 +++++++++++++++++++++----------- inst/doc |only man/toOrdinal-package.Rd | 8 +++--- tests/testthat/test_toOrdinal_english.R | 8 +++--- tests/testthat/test_toOrdinal_german.R |only tests/testthat/test_toOrdinal_swedish.R | 8 +++--- vignettes |only 14 files changed, 92 insertions(+), 61 deletions(-)
Title: Super Learner Prediction
Description: Implements the super learner prediction method and contains a
library of prediction algorithms to be used in the super learner.
Author: Eric Polley [aut, cre],
Erin LeDell [aut],
Chris Kennedy [aut],
Sam Lendle [ctb],
Mark van der Laan [aut, ths]
Maintainer: Eric Polley <polley.eric@mayo.edu>
Diff between SuperLearner versions 2.0-21 dated 2016-12-01 and 2.0-22 dated 2017-07-18
SuperLearner-2.0-21/SuperLearner/tests/testthat/testBartMachine.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/testCreateLearner.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/testMethods.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/testRandomForest.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/testSummaryCVSuperLearner.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/testXGBoost.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/test_SuperLearner.R |only SuperLearner-2.0-21/SuperLearner/tests/testthat/test_cforest.R |only SuperLearner-2.0-22/SuperLearner/DESCRIPTION | 23 SuperLearner-2.0-22/SuperLearner/MD5 | 141 +++- SuperLearner-2.0-22/SuperLearner/NAMESPACE | 13 SuperLearner-2.0-22/SuperLearner/R/CV.SuperLearner.R | 2 SuperLearner-2.0-22/SuperLearner/R/SL.bartMachine.R | 1 SuperLearner-2.0-22/SuperLearner/R/SL.biglasso.R |only SuperLearner-2.0-22/SuperLearner/R/SL.dbarts.R |only SuperLearner-2.0-22/SuperLearner/R/SL.earth.R | 8 SuperLearner-2.0-22/SuperLearner/R/SL.extraTrees.R |only SuperLearner-2.0-22/SuperLearner/R/SL.glm.R | 88 ++ SuperLearner-2.0-22/SuperLearner/R/SL.glmnet.R | 164 +++++ SuperLearner-2.0-22/SuperLearner/R/SL.kernelKnn.R |only SuperLearner-2.0-22/SuperLearner/R/SL.ksvm.R |only SuperLearner-2.0-22/SuperLearner/R/SL.lda.R |only SuperLearner-2.0-22/SuperLearner/R/SL.lm.R |only SuperLearner-2.0-22/SuperLearner/R/SL.qda.R |only SuperLearner-2.0-22/SuperLearner/R/SL.randomForest.R | 7 SuperLearner-2.0-22/SuperLearner/R/SL.ranger.R |only SuperLearner-2.0-22/SuperLearner/R/SL.speedglm.R |only SuperLearner-2.0-22/SuperLearner/R/SL.speedlm.R |only SuperLearner-2.0-22/SuperLearner/R/SL.xgboost.R | 57 + SuperLearner-2.0-22/SuperLearner/R/SuperLearner.R | 160 ++--- SuperLearner-2.0-22/SuperLearner/R/create.Learner.R | 4 SuperLearner-2.0-22/SuperLearner/R/mcSuperLearner.R | 15 SuperLearner-2.0-22/SuperLearner/R/method.R | 300 ++++++---- SuperLearner-2.0-22/SuperLearner/R/predict.SuperLearner.R | 91 ++- SuperLearner-2.0-22/SuperLearner/R/snowSuperLearner.R | 23 SuperLearner-2.0-22/SuperLearner/build/vignette.rds |binary SuperLearner-2.0-22/SuperLearner/inst/NEWS | 24 SuperLearner-2.0-22/SuperLearner/inst/doc/Guide-to-SuperLearner.R |only SuperLearner-2.0-22/SuperLearner/inst/doc/Guide-to-SuperLearner.Rmd |only SuperLearner-2.0-22/SuperLearner/inst/doc/Guide-to-SuperLearner.html |only SuperLearner-2.0-22/SuperLearner/inst/doc/SuperLearnerPresent.pdf |binary SuperLearner-2.0-22/SuperLearner/man/CV.SuperLearner.Rd | 4 SuperLearner-2.0-22/SuperLearner/man/SL.bartMachine.Rd | 1 SuperLearner-2.0-22/SuperLearner/man/SL.biglasso.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.cforest.Rd | 1 SuperLearner-2.0-22/SuperLearner/man/SL.dbarts.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.extraTrees.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.glm.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.glmnet.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.kernelKnn.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.ksvm.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.lda.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.lm.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.qda.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.ranger.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.speedglm.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.speedlm.Rd |only SuperLearner-2.0-22/SuperLearner/man/SL.xgboost.Rd | 9 SuperLearner-2.0-22/SuperLearner/man/SampleSplitSuperLearner.Rd | 4 SuperLearner-2.0-22/SuperLearner/man/SuperLearner.Rd | 2 SuperLearner-2.0-22/SuperLearner/man/create.Learner.Rd | 1 SuperLearner-2.0-22/SuperLearner/man/create.SL.xgboost.Rd | 1 SuperLearner-2.0-22/SuperLearner/man/listWrappers.Rd | 2 SuperLearner-2.0-22/SuperLearner/man/plot.CV.SuperLearner.Rd | 4 SuperLearner-2.0-22/SuperLearner/man/predict.SL.bartMachine.Rd | 1 SuperLearner-2.0-22/SuperLearner/man/predict.SL.biglasso.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.dbarts.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.extraTrees.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.glm.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.glmnet.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.kernelKnn.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.ksvm.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.lda.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.lm.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.qda.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.ranger.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.speedglm.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.speedlm.Rd |only SuperLearner-2.0-22/SuperLearner/man/predict.SL.xgboost.Rd | 1 SuperLearner-2.0-22/SuperLearner/man/predict.superlearner.Rd | 56 + SuperLearner-2.0-22/SuperLearner/man/recombineSL.Rd | 2 SuperLearner-2.0-22/SuperLearner/man/write.SL.template.Rd | 6 SuperLearner-2.0-22/SuperLearner/man/write.screen.template.Rd | 3 SuperLearner-2.0-22/SuperLearner/tests/cran |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-SuperLearner.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-XGBoost.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-bartMachine.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-biglasso.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-cforest.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-createLearner.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-dbarts.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-extraTrees.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-glm.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-glmnet.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-kernelKnn.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-knn.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-ksvm.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-lda.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-lm.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-methods.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-qda.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-randomForest.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-ranger.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-speedglm.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-speedlm.R |only SuperLearner-2.0-22/SuperLearner/tests/testthat/test-summaryCVSuperLearner.R |only SuperLearner-2.0-22/SuperLearner/vignettes/Guide-to-SuperLearner.Rmd |only SuperLearner-2.0-22/SuperLearner/vignettes/styles.css |only 108 files changed, 860 insertions(+), 359 deletions(-)
Title: Unconstrained Optimization using the Subplex Algorithm
Description: The subplex algorithm for unconstrained optimization, developed by Tom Rowan <http://www.netlib.org/opt/subplex.tgz>.
Author: Aaron A. King
Maintainer: Aaron A. King <kingaa@umich.edu>
Diff between subplex versions 1.2-2 dated 2016-11-19 and 1.4-1 dated 2017-07-18
DESCRIPTION | 8 ++++---- MD5 | 19 ++++++++++--------- NAMESPACE | 2 +- R/subplex.R | 27 ++++++++++++++++----------- man/subplex.Rd | 2 ++ src/call_subplex.c | 42 +++++++++++++++--------------------------- src/init.c |only tests/ripple.R | 8 +++++++- tests/ripple.Rout.save | 17 ++++++++++------- tests/rosen.R | 3 +++ tests/rosen.Rout.save | 3 +++ 11 files changed, 71 insertions(+), 60 deletions(-)
Title: Semiparametric Estimating Functions
Description: Functions for fitting semiparametric regression models for
panel count survival data. An overview of the package can be found
in Wang and Yan (2011) <doi:10.1016/j.cmpb.2010.10.005>.
Author: Sy Han (Steven) Chiou, Xiaojing Wang and Jun Yan
Maintainer: Sy Han (Steven) Chiou <schiou@utdallas.edu>
Diff between spef versions 1.0-3 dated 2017-04-25 and 1.0-4 dated 2017-07-18
spef-1.0-3/spef/R/plot.panelReg.R |only spef-1.0-3/spef/src/spef_init.c |only spef-1.0-4/spef/ChangeLog | 10 + spef-1.0-4/spef/DESCRIPTION | 19 +- spef-1.0-4/spef/MD5 | 21 +- spef-1.0-4/spef/NAMESPACE | 8 spef-1.0-4/spef/R/panelReg.R | 242 ++++++++++++++++++---------- spef-1.0-4/spef/R/plot.R |only spef-1.0-4/spef/README.md |only spef-1.0-4/spef/data/skiTum.rda |only spef-1.0-4/spef/man/blaTum.Rd | 9 - spef-1.0-4/spef/man/panelReg.Rd | 50 +++-- spef-1.0-4/spef/man/skiTum.Rd |only spef-1.0-4/spef/src/pcReg.c | 4 spef-1.0-4/spef/src/registerDynamicSymbol.c |only 15 files changed, 234 insertions(+), 129 deletions(-)
Title: Variable Metric Nonlinear Function Minimization
Description: Variable metric nonlinear function minimization with bounds constraints.
Author: John C. Nash [aut, cre]
Maintainer: John C. Nash <nashjc@uottawa.ca>
Diff between Rvmmin versions 2013-11.12 dated 2014-12-06 and 2017-7.18 dated 2017-07-18
DESCRIPTION | 12 MD5 | 26 + NAMESPACE | 4 NEWS | 34 ++ R/Rvmmin.R | 288 +++++++++++---------- R/Rvmminb.R | 761 +++++++++++++++++++++++++++++---------------------------- R/Rvmminu.R | 613 +++++++++++++++++++++++++++++---------------- build |only inst |only man/Rvmmin.Rd | 151 +++++++---- man/Rvmminb.Rd | 30 -- man/Rvmminu.Rd | 34 -- tests |only vignettes |only 14 files changed, 1113 insertions(+), 840 deletions(-)
Title: Ornstein-Uhlenbeck Models for Phylogenetic Comparative
Hypotheses
Description: Fit and compare Ornstein-Uhlenbeck models for evolution along a phylogenetic tree.
Author: Aaron A. King <kingaa@umich.edu> and Marguerite A. Butler <mbutler@hawaii.edu>
Maintainer: Aaron A. King <kingaa@umich.edu>
Diff between ouch versions 2.9-2 dated 2015-07-10 and 2.11-1 dated 2017-07-18
DESCRIPTION | 8 ++++---- MD5 | 21 ++++++++++++++------- NAMESPACE | 6 +----- R/glssoln.R | 40 +++++++++++++++++++++++----------------- inst/CITATION | 8 ++++---- inst/NEWS | 6 ++++++ inst/NEWS.Rd | 6 ++++++ man/hansen.Rd | 2 +- src/init.c |only tests |only 10 files changed, 59 insertions(+), 38 deletions(-)
Title: Command Line Option Parser
Description: A command line parser inspired by Python's 'optparse' library to
be used with Rscript to write "#!" shebang scripts that accept short and
long flag/options.
Author: Trevor L Davis. Some documentation and examples ported from Allen Day's
getopt package. Some documentation from the optparse Python module by the
Python Software Foundation. Contributions from Steve Lianoglou, Jim
Nikelski, Kirill Müller, Peter Humburg, and Rich FitzJohn.
Maintainer: Trevor L Davis <trevor.l.davis@gmail.com>
Diff between optparse versions 1.3.2 dated 2015-10-03 and 1.4.4 dated 2017-07-18
optparse-1.3.2/optparse/inst/doc/optparse.pdf |only optparse-1.4.4/optparse/DESCRIPTION | 11 +- optparse-1.4.4/optparse/MD5 | 30 +++---- optparse-1.4.4/optparse/NAMESPACE | 3 optparse-1.4.4/optparse/NEWS | 15 +++ optparse-1.4.4/optparse/R/optparse.R | 46 ++++++++--- optparse-1.4.4/optparse/build/vignette.rds |binary optparse-1.4.4/optparse/inst/COPYRIGHTS | 4 - optparse-1.4.4/optparse/inst/doc/optparse.html |only optparse-1.4.4/optparse/man/OptionParser-class.Rd | 10 +- optparse-1.4.4/optparse/man/OptionParser.Rd | 9 +- optparse-1.4.4/optparse/man/OptionParserOption-class.Rd | 11 +- optparse-1.4.4/optparse/man/add_make_option.Rd | 24 +++--- optparse-1.4.4/optparse/man/optparse-package.Rd | 23 +++-- optparse-1.4.4/optparse/man/parse_args.Rd | 55 ++++++++----- optparse-1.4.4/optparse/man/print_help.Rd | 9 +- optparse-1.4.4/optparse/tests/testthat/test-optparse.R | 63 ++++++++++++---- 17 files changed, 198 insertions(+), 115 deletions(-)
Title: Masked User Input
Description: A micro-package for reading "passwords", i.e. reading
user input with masking, so that the input is not displayed as it
is typed. Currently we have support for 'RStudio', the command line
(every OS), and any platform where 'tcltk' is present.
Author: Drew Schmidt [aut, cre],
Wei-Chen Chen [aut],
Gabor Csardi [ctb] (Improved terminal detection),
Rich FitzJohn [ctb]
Maintainer: Drew Schmidt <wrathematics@gmail.com>
Diff between getPass versions 0.1-1 dated 2016-04-26 and 0.2-1 dated 2017-07-18
getPass-0.1-1/getPass/build |only getPass-0.1-1/getPass/inst/doc/getPass.Rmd |only getPass-0.1-1/getPass/inst/doc/getPass.html |only getPass-0.1-1/getPass/src/print_stderr.c |only getPass-0.1-1/getPass/vignettes/getPass.Rmd |only getPass-0.1-1/getPass/vignettes/include/custom.css |only getPass-0.1-1/getPass/vignettes/include/header.html |only getPass-0.1-1/getPass/vignettes/include/headers.js |only getPass-0.1-1/getPass/vignettes/rebuild |only getPass-0.2-1/getPass/ChangeLog | 22 + getPass-0.2-1/getPass/DESCRIPTION | 24 + getPass-0.2-1/getPass/MD5 | 53 ++-- getPass-0.2-1/getPass/NAMESPACE | 3 getPass-0.2-1/getPass/R/getPass-package.r | 4 getPass-0.2-1/getPass/R/getPass.r | 129 +--------- getPass-0.2-1/getPass/R/readline_masked_rstudio.r |only getPass-0.2-1/getPass/R/readline_masked_tcltk.r |only getPass-0.2-1/getPass/R/readline_masked_term.r |only getPass-0.2-1/getPass/R/readline_nomask.r |only getPass-0.2-1/getPass/R/utils.r | 12 getPass-0.2-1/getPass/README.md | 33 +- getPass-0.2-1/getPass/inst/CITATION | 2 getPass-0.2-1/getPass/inst/doc/getPass.Rnw |only getPass-0.2-1/getPass/inst/doc/getPass.pdf |only getPass-0.2-1/getPass/man/getPass-package.Rd | 7 getPass-0.2-1/getPass/man/getPass.Rd | 18 - getPass-0.2-1/getPass/src/getPass.h |only getPass-0.2-1/getPass/src/getPass_native.c |only getPass-0.2-1/getPass/src/platform.h |only getPass-0.2-1/getPass/src/readline_masked.c | 77 +++-- getPass-0.2-1/getPass/tests |only getPass-0.2-1/getPass/vignettes/build_pdf.sh |only getPass-0.2-1/getPass/vignettes/getPass.Rnw |only getPass-0.2-1/getPass/vignettes/include/00-acknowledgement.tex |only getPass-0.2-1/getPass/vignettes/include/getPass.bib |only getPass-0.2-1/getPass/vignettes/include/lastpage.sty |only getPass-0.2-1/getPass/vignettes/include/settings.log |only getPass-0.2-1/getPass/vignettes/include/settings.tex |only getPass-0.2-1/getPass/vignettes/include/uch_small.png |only getPass-0.2-1/getPass/vignettes/pics |only 40 files changed, 171 insertions(+), 213 deletions(-)
Title: An Implementation of Parsing and Writing Configuration File
(JSON/INI/YAML/TOML)
Description: Implements the JSON, INI, YAML and TOML parser for R setting and writing of configuration file. The functionality of this package is similar to that of package 'config'.
Author: Jianfeng Li [aut, cre]
Maintainer: Jianfeng Li <lee_jianfeng@sjtu.edu.cn>
Diff between configr versions 0.3.0 dated 2017-06-22 and 0.3.1 dated 2017-07-18
ChangeLog | 5 ++++ DESCRIPTION | 6 ++--- MD5 | 31 ++++++++++++++------------ NAMESPACE | 1 R/del.R |only R/write.R | 10 +++++++- README.md | 52 ++++++++++++++++++++++++++++++++++---------- build/vignette.rds |binary inst/doc/configr.R | 11 +++++++++ inst/doc/configr.Rmd | 14 +++++++++++ inst/doc/configr.html | 36 ++++++++++++++++++++++-------- inst/doc/filetypes.Rmd | 2 - inst/doc/filetypes.html | 4 +-- man/config.sections.del.Rd |only man/write.config.Rd | 4 ++- tests/testthat/test_l_del.R |only vignettes/configr.Rmd | 14 +++++++++++ vignettes/filetypes.Rmd | 2 - 18 files changed, 146 insertions(+), 46 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-07-14 1.4
2016-08-12 1.3
2016-01-13 1.1
Title: Nested and Crossed Block Designs for Factorial, Fractional
Factorial and Unstructured Treatment Sets
Description: The 'blocksdesign' package constructs nested block and
D-optimal factorial designs for any unstructured or factorial
treatment model of any size. The nested block designs can have
repeated nesting down to any required depth of nesting with
either a simple set of nested blocks or a crossed
row-and-column blocks design at each level of nesting.
The block design at each level of nesting is optimized for
D-efficiency within the blocks of each preceding set of blocks.
The block sizes in any particular block classification are
always as nearly equal as possible and never differ by more
than a single plot. Outputs include a table showing the
allocation of treatments to blocks, a plan layout showing
the allocation of treatments within blocks (unstructured
treatment designs only) the achieved D-efficiency and
A-efficiency factors for the block and treatment design
(factorial treatment designs only) and,
where feasible, an A-efficiency upper bound for
the block design (unstructured treatment designs only).
Author: R. N. Edmondson.
Maintainer: Rodney Edmondson <rodney.edmondson@gmail.com>
Diff between blocksdesign versions 2.5 dated 2017-06-15 and 2.6 dated 2017-07-18
DESCRIPTION | 47 +- MD5 | 14 NAMESPACE | 1 R/blocks.r | 868 +++++++++++--------------------------------- R/blocksdesign-package.r | 69 +-- R/factblocks.r |only man/blocks.Rd | 163 ++------ man/blocksdesign-package.Rd | 69 +-- man/factblocks.Rd |only 9 files changed, 387 insertions(+), 844 deletions(-)
Title: Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and
Destruction Rate Modelling
Description: Distributions that are typically used for exposure rating in
general insurance, in particular to price reinsurance contracts.
The vignettes show code snippets to fit the distribution to
empirical data.
Author: Giorgio Spedicato [aut, cre],
Christophe Dutang [aut],
Markus Gesmann [ctb]
Maintainer: Giorgio Spedicato <spedicato_giorgio@yahoo.it>
Diff between mbbefd versions 0.8.8 dated 2017-02-21 and 0.8.8.1 dated 2017-07-18
mbbefd-0.8.8.1/mbbefd/ChangeLog | 4 +++ mbbefd-0.8.8.1/mbbefd/DESCRIPTION | 8 +++--- mbbefd-0.8.8.1/mbbefd/MD5 | 13 ++++------ mbbefd-0.8.8.1/mbbefd/NEWS | 6 +++- mbbefd-0.8.8.1/mbbefd/R/RcppExports.R | 6 ++-- mbbefd-0.8.8.1/mbbefd/inst/doc/Introduction_to_mbbefd.pdf |binary mbbefd-0.8.8.1/mbbefd/src/RcppExports.cpp | 18 +++++++++++--- mbbefd-0.8.8/mbbefd/src/init.c |only 8 files changed, 36 insertions(+), 19 deletions(-)
Title: River Network Distance Computation and Applications
Description: Reads river network shape files and computes network distances.
Also included are a variety of computation and graphical tools designed
for fisheries telemetry research, such as minimum home range, kernel density
estimation, and clustering analysis using empirical k-functions with
a bootstrap envelope. Tools are also provided for editing the river
networks, meaning there is no reliance on external software.
Author: Matt Tyers [aut, cre]
Maintainer: Matt Tyers <matt.tyers@alaska.gov>
Diff between riverdist versions 0.14.0 dated 2017-03-31 and 0.15.0 dated 2017-07-18
DESCRIPTION | 8 MD5 | 62 ++-- NAMESPACE | 1 NEWS.md | 28 +- R/apps_of_direction.R | 4 R/cleanup_verts.R |only R/dataset_help.R | 2 R/detectbraiding.R | 258 +++++++++++------- R/detectroute_riverdistance.R | 53 ++- R/riverdist_1.R | 44 ++- R/segs_direction.R | 2 R/segsplit.R | 254 ++++++++++++++++-- R/shortestroute_cleanup.R | 542 +++++++++++++++++++++++++++++---------- README.md | 2 build/vignette.rds |binary data/Koyukuk2.rda |binary inst/doc/riverdist_vignette.Rmd | 10 inst/doc/riverdist_vignette.html | 22 - man/addverts.Rd | 2 man/buildlookup.Rd | 2 man/cleanup.Rd | 2 man/cleanup_verts.Rd |only man/connectsegs.Rd | 19 - man/mouthdistbysurvey.Rd | 2 man/riverdirection.Rd | 2 man/riverdist-package.Rd | 4 man/riverdistancelist.Rd | 4 man/rivernetwork.Rd | 2 man/routelist.Rd | 17 - man/setmouth.Rd | 2 man/splitsegments.Rd | 19 + tests/testthat/test_riverdist.R | 13 vignettes/riverdist_vignette.Rmd | 10 33 files changed, 1012 insertions(+), 380 deletions(-)
Title: Convert Chinese Characters into Pinyin
Description: Convert Chinese characters into Pinyin (the official romanization system for Standard Chinese in mainland China, Malaysia, Singapore, and Taiwan. See <https://en.wikipedia.org/wiki/Pinyin> for details).
Author: Peng Zhao
Maintainer: Peng Zhao <pzhao@pzhao.net>
Diff between pinyin versions 1.0.2 dated 2017-06-19 and 1.1.0 dated 2017-07-18
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/foo.R | 31 +++++++++++++++++++------------ inst/doc/pinyin.html | 4 ++-- man/bookdown2py.Rd | 7 ++++++- man/file2py.Rd | 2 +- man/pinyin.Rd | 2 +- man/pylib.Rd | 2 +- 8 files changed, 41 insertions(+), 29 deletions(-)
Title: PRIM Survival Regression Classification
Description: Performs a unified treatment of Bump Hunting by Patient Rule Induction Method (PRIM) in Survival, Regression and Classification settings (SRC). The current version is a development release that only implements the case of a survival response. New features will be added soon as they are available.
Author: Jean-Eudes Dazard [aut, cre], Michael Choe [ctb], Michael LeBlanc [ctb], Alberto Santana [ctb]
Maintainer: Jean-Eudes Dazard <jean-eudes.dazard@case.edu>
Diff between PRIMsrc versions 0.7.1 dated 2017-06-24 and 0.7.2 dated 2017-07-18
PRIMsrc-0.7.1/PRIMsrc/inst/doc/PRIMsrc_0.7.1.pdf |only PRIMsrc-0.7.2/PRIMsrc/DESCRIPTION | 8 - PRIMsrc-0.7.2/PRIMsrc/MD5 | 12 - PRIMsrc-0.7.2/PRIMsrc/R/PRIMsrc.internal.r | 149 +++++++++-------------- PRIMsrc-0.7.2/PRIMsrc/R/PRIMsrc.r | 39 +++--- PRIMsrc-0.7.2/PRIMsrc/README.md | 12 - PRIMsrc-0.7.2/PRIMsrc/inst/NEWS | 11 + PRIMsrc-0.7.2/PRIMsrc/inst/doc/PRIMsrc_0.7.2.pdf |only 8 files changed, 108 insertions(+), 123 deletions(-)
Title: Inferring Latent Diffusion Networks
Description: This is an R implementation of the netinf algorithm (Gomez Rodriguez, Leskovec, and Krause, 2010)<doi:10.1145/1835804.1835933>. Given a set of events that spread between a set of nodes the algorithm infers the most likely stable diffusion network that is underlying the diffusion process.
Author: Fridolin Linder [aut, cre],
Bruce Desmarais [ctb]
Maintainer: Fridolin Linder <fridolin.linder@gmail.com>
Diff between NetworkInference versions 1.1.0 dated 2017-06-06 and 1.1.1 dated 2017-07-18
DESCRIPTION | 8 ++--- MD5 | 29 +++++++++--------- NEWS.md | 8 +++++ R/RcppExports.R | 4 +- R/plot.R | 13 +++----- R/simulate_cascades.R | 8 +++-- R/zzz.R | 2 - build/vignette.rds |binary inst/doc/netinf_vignette.R | 14 ++++++-- inst/doc/netinf_vignette.Rmd | 14 ++++++-- inst/doc/netinf_vignette.html | 58 ++++++++++++++++++++----------------- src/NetworkInference_init.c | 8 ++--- src/RcppExports.cpp | 4 +- tests/testthat/test_simulation.R | 61 +++++++++++++++++++-------------------- vignettes/netinf_vignette.Rmd | 14 ++++++-- vignettes/readme.html |only 16 files changed, 141 insertions(+), 104 deletions(-)
More information about NetworkInference at CRAN
Permanent link
Title: Multiplicative Competitive Interaction (MCI) Model
Description: Market area models are used to analyze and predict store choices and market areas concerning retail and service locations. This package implements two market area models (Huff Model, Multiplicative Competitive Interaction Model) into R, while the emphases lie on 1.) fitting these models based on empirical data via OLS regression and nonlinear techniques and 2.) data preparation and processing (esp. interaction matrices and data preparation for the MCI Model).
Author: Thomas Wieland
Maintainer: Thomas Wieland <thomas.wieland.geo@googlemail.com>
Diff between MCI versions 1.3.0 dated 2016-09-01 and 1.3.1 dated 2017-07-18
DESCRIPTION | 8 ++++---- MD5 | 3 ++- inst |only 3 files changed, 6 insertions(+), 5 deletions(-)
Title: Individual Tree Growth Modeling
Description: Individual tree model is an instrument to support the decision with
regard to forest management. This package provides functions that let you work
with data for this model. Also other support functions and extension related to
this model are available.
Author: Clayton Vieira Fraga Filho, Miqueias Fernandes
Maintainer: Clayton Vieira Fraga Filho <forestgrowthsoftware@gmail.com>
Diff between ITGM versions 0.4 dated 2016-10-10 and 0.5 dated 2017-07-18
DESCRIPTION | 10 ++++---- MD5 | 40 ++++++++++++++++++++++++++-------- NAMESPACE | 19 ++++++++++++++++ R/addSettings.R |only R/avaliaModeloEspecial.R |only R/avaliaVolumeAvancado2.R |only R/criaModeloExclusivo2.R |only R/criaModeloGenerico2.R |only R/getAllEstatisticsFn.R |only R/getAllGraphicsFn.R |only R/plotRB.R |only R/preparaFormula.R |only R/removeColsSuspicious.R |only R/runAndReport.R |only man/addSettings.Rd |only man/avaliaModeloEspecial.Rd |only man/avaliaVolumeAvancado2.Rd |only man/criaModeloExclusivo2.Rd |only man/criaModeloGenerico2.Rd |only man/firstsMeasurements.Rd | 1 man/getAllEstatisticsFn.Rd |only man/getAllGraphicsFn.Rd |only man/getModelosLiteraturaExclusivos.Rd | 1 man/getModelosLiteraturaGenericos.Rd | 1 man/getModelsExclusiveOfLiterature.Rd | 1 man/getModelsGenericOfLiterature.Rd | 1 man/maiTOmdd.Rd | 1 man/plotRB.Rd |only man/preparaFormula.Rd |only man/project.Rd | 1 man/removeColsSuspicious.Rd |only man/runAndReport.Rd |only 32 files changed, 55 insertions(+), 21 deletions(-)
Title: Query 'HaploReg' and 'RegulomeDB'
Description: A set of utilities for querying
'HaploReg' <http://archive.broadinstitute.org/mammals/haploreg/haploreg.php>
and 'RegulomeDB' <http://www.regulomedb.org> web-based tools. The package connects to
'HaploReg' or 'RegulomeDB', searches and downloads results, without
opening web pages, directly from R environment.
Results are stored in a data frame that can be directly used in various
kinds of downstream analyses.
Author: Ilya Y. Zhbannikov [aut, cre],
Konstantin G Arbeev [ctb] (Konstantin supervised the technical/software
development.),
Anatoliy I Yashin [ctb] (Anatoliy supervised the technical/software
development and is a Principal Invesigator of this project)
Maintainer: Ilya Y. Zhbannikov <ilya.zhbannikov@duke.edu>
Diff between haploR versions 1.4.6 dated 2017-06-12 and 1.5.1 dated 2017-07-18
DESCRIPTION | 16 +- MD5 | 28 ++-- NAMESPACE | 4 R/general.R | 5 R/haploreg.R | 96 +++++++++++++++ R/haploregExtendedView.R |only R/regulome.R | 18 +- README.md | 4 inst/NEWS | 4 inst/doc/haplor-vignette.R | 5 inst/doc/haplor-vignette.Rmd | 19 +++ inst/doc/haplor-vignette.html | 258 ++++++++++++++++++++++-------------------- man/haploR-getExtendedView.Rd |only man/haploR-queryHaploreg.Rd | 1 man/haploR-queryRegulome.Rd | 2 vignettes/haplor-vignette.Rmd | 19 +++ 16 files changed, 321 insertions(+), 158 deletions(-)
Title: Calculating Ratios Between Two Data Sets and Correction for
Adhering Particles on Plants
Description: Calculation of ratios between two data sets containing environmental data like
element concentrations by different methods. Additionally plant element
concentrations can be corrected for adhering particles (soil, airborne dust).
Author: Solveig Pospiech [aut, cre],
Wiebke Fahlbusch [ctb]
Maintainer: Solveig Pospiech <s.pospiech@gmx.de>
Diff between ratios versions 1.0.0 dated 2017-06-25 and 1.1.0 dated 2017-07-18
DESCRIPTION | 10 +- MD5 | 15 +-- NEWS.md |only R/CorrectionAdheringParticles.R | 12 ++ R/Ratios.R | 175 ++++++++++++++++++++++++++++++---------- R/Subfunctions.R | 30 +++++- R/pkgname.R | 40 +++++++++ man/ratio.DT1_DT2.Rd | 35 +++++--- man/ratios-package.Rd | 40 +++++++++ 9 files changed, 287 insertions(+), 70 deletions(-)
More information about uptasticsearch at CRAN
Permanent link
Title: 'Rcpp' Interface to the APT Package Manager
Description: The 'APT Package Management System' provides Debian and
Debian-derived Linux systems with a powerful system to resolve package
dependencies. This package offers access directly from R.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppAPT versions 0.0.3 dated 2016-12-07 and 0.0.4 dated 2017-07-18
ChangeLog | 60 +++++++++++++++++++++++++++++++++++++++ DESCRIPTION | 12 ++++--- MD5 | 43 +++++++++++++++++++--------- R/RcppExports.R | 41 ++++++++++++++++++++------- README.md | 2 - build |only inst/NEWS.Rd |only inst/doc |only inst/scripts |only man/buildDepends.Rd | 1 man/dumpPackages.Rd | 1 man/getDepends.Rd |only man/getPackages.Rd | 4 -- man/hasPackages.Rd | 1 man/reverseDepends.Rd | 1 man/showSrc.Rd | 1 src/RcppExports.cpp | 39 +++++++++++++++++++++---- src/buildDepends.cpp | 20 +++++++------ src/getPackages.cpp | 35 +++++++---------------- src/reverseDepends.cpp | 74 ++++++++++++++++++++++++++++++++++++++++++++++--- vignettes |only 21 files changed, 256 insertions(+), 79 deletions(-)
Title: Noncompartmental Analysis for Pharmacokinetic Report
Description: Conduct a noncompartmental analysis as closely as possible to the most widely used commercial software for pharmacokinetic analysis, i.e. 'Phoenix(R) WinNonlin(R)' <https://www.certara.com/software/pkpd-modeling-and-simulation/phoenix-winnonlin/>.
Some features are
1) CDISC SDTM terms
2) Automatic slope selection with the same criterion of WinNonlin(R)
3) Supporting both 'linear-up linear-down' and 'linear-up log-down' method
4) Interval(partial) AUCs with 'linear' or 'log' interpolation method
5) Produce pdf, rtf, text report files.
* Reference: Gabrielsson J, Weiner D. Pharmacokinetic and Pharmacodynamic Data Analysis - Concepts and Applications. 5th ed. 2016. (ISBN:9198299107).
Author: Kyun-Seop Bae [aut]
Maintainer: Kyun-Seop Bae <k@acr.kr>
Diff between ncar versions 0.3.5 dated 2017-07-10 and 0.3.6 dated 2017-07-18
DESCRIPTION | 8 +- MD5 | 8 +- R/txtNCA.R | 152 ++++++++++++++++++++++++----------------------- inst/NEWS.Rd | 7 +- inst/doc/ncar-manual.pdf |binary 5 files changed, 94 insertions(+), 81 deletions(-)
Title: Access the 'languagelayer' API
Description: Improve your text analysis with languagelayer
<https://languagelayer.com>, a powerful language detection
API.
Author: Colin FAY [aut, cre]
Maintainer: Colin FAY <contact@colinfay.me>
Diff between languagelayeR versions 1.0.0 dated 2016-12-19 and 1.1.0 dated 2017-07-18
languagelayeR-1.0.0/languagelayeR/R/getLanguage.R |only languagelayeR-1.0.0/languagelayeR/R/getSupportedLanguage.R |only languagelayeR-1.1.0/languagelayeR/DESCRIPTION | 18 ++++-- languagelayeR-1.1.0/languagelayeR/MD5 | 29 ++++++---- languagelayeR-1.1.0/languagelayeR/NAMESPACE | 2 languagelayeR-1.1.0/languagelayeR/R/get_lang.R |only languagelayeR-1.1.0/languagelayeR/R/get_supported_lang.R |only languagelayeR-1.1.0/languagelayeR/R/languagelayeR.R |only languagelayeR-1.1.0/languagelayeR/R/setApiKey.R | 20 +++--- languagelayeR-1.1.0/languagelayeR/R/utils.R | 3 - languagelayeR-1.1.0/languagelayeR/build |only languagelayeR-1.1.0/languagelayeR/inst |only languagelayeR-1.1.0/languagelayeR/man/getLanguage.Rd | 24 ++------ languagelayeR-1.1.0/languagelayeR/man/getSupportedLanguage.Rd | 23 ++----- languagelayeR-1.1.0/languagelayeR/man/get_lang.Rd |only languagelayeR-1.1.0/languagelayeR/man/get_supported_lang.Rd |only languagelayeR-1.1.0/languagelayeR/man/languagelayeR.Rd |only languagelayeR-1.1.0/languagelayeR/man/setApiKey.Rd | 17 +---- languagelayeR-1.1.0/languagelayeR/tests |only languagelayeR-1.1.0/languagelayeR/vignettes |only 20 files changed, 62 insertions(+), 74 deletions(-)
Title: Distance Weighted Discrimination (DWD) and Kernel Methods
Description: A novel implementation that solves the linear distance weighted discrimination and the kernel distance weighted discrimination.
Author: Boxiang Wang <boxiang@umn.edu>, Hui Zou <hzou@stat.umn.edu>
Maintainer: Boxiang Wang <boxiang@umn.edu>
Diff between kerndwd versions 2.0.0 dated 2017-05-24 and 2.0.1 dated 2017-07-18
DESCRIPTION | 8 ++++---- MD5 | 18 +++++++++--------- man/cv.kerndwd.Rd | 4 ++-- man/dots.Rd | 3 ++- man/kerndwd-package.Rd | 2 +- man/kerndwd.Rd | 7 ++++--- man/plot.cv.kerndwd.Rd | 5 +++-- man/plot.kerndwd.Rd | 4 ++-- man/predict.kerndwd.Rd | 3 ++- man/tunedwd.Rd | 6 +++--- 10 files changed, 32 insertions(+), 28 deletions(-)
Title: Statistical Inference for Partially Observed Markov Processes
Description: Tools for working with partially observed Markov process (POMP) models (also known as stochastic dynamical systems, hidden Markov models, and nonlinear, non-Gaussian, state-space models). The package provides facilities for implementing POMP models, simulating them, and fitting them to time series data by a variety of frequentist and Bayesian methods. It is also a versatile platform for implementation of inference methods for general POMP models.
Author: Aaron A. King [aut, cre],
Edward L. Ionides [aut],
Carles Breto [aut],
Stephen P. Ellner [ctb],
Matthew J. Ferrari [ctb],
Bruce E. Kendall [ctb],
Michael Lavine [ctb],
Dao Nguyen [ctb],
Daniel C. Reuman [ctb],
Helen Wearing [ctb],
Simon N. Wood [ctb],
Sebastian Funk [ctb],
Steven G. Johnson [ctb]
Maintainer: Aaron A. King <kingaa@umich.edu>
Diff between pomp versions 1.12 dated 2017-04-19 and 1.13 dated 2017-07-18
DESCRIPTION | 8 MD5 | 22 - R/plugins.R | 719 ++++++++++++++++++++++++------------------------- R/simulate_pomp.R | 11 build/partial.rdb |binary inst/NEWS | 12 inst/NEWS.Rd | 9 inst/examples/ricker.R | 8 man/lowlevel.Rd | 4 man/ricker.Rd | 2 src/ricker.c | 6 src/ssa.c | 42 +- 12 files changed, 442 insertions(+), 401 deletions(-)
Title: Analysis of Diffusion and Contagion Processes on Networks
Description: Empirical statistical analysis, visualization and simulation of
diffusion and contagion processes on networks. The package implements algorithms
for calculating network diffusion statistics such as transmission rate, hazard
rates, exposure models, network threshold levels, infectiousness (contagion),
and susceptibility. The package is inspired by work published in Valente,
et al., (2015) <DOI:10.1016/j.socscimed.2015.10.001>; Valente (1995) <ISBN:
9781881303213>, Myers (2000) <DOI:10.1086/303110>, Iyengar and others (2011)
<DOI:10.1287/mksc.1100.0566>, Burt (1987) <DOI:10.1086/228667>; among others.
Author: George Vega Yon [aut, cre] (Rewrite functions with Rcpp, plus new
features),
Stephanie Dyal [aut] (Package's first version),
Timothy Hayes [aut] (Package's first version),
Thomas Valente [aut, cph] (R original code)
Maintainer: George Vega Yon <g.vegayon@gmail.com>
Diff between netdiffuseR versions 1.17.0 dated 2016-11-10 and 1.18.0 dated 2017-07-18
netdiffuseR-1.17.0/netdiffuseR/R/adjmat.R |only netdiffuseR-1.17.0/netdiffuseR/R/data.R |only netdiffuseR-1.17.0/netdiffuseR/R/diffnet-indexing.R |only netdiffuseR-1.17.0/netdiffuseR/R/diffnet-methods.R |only netdiffuseR-1.17.0/netdiffuseR/R/graph_data.R |only netdiffuseR-1.17.0/netdiffuseR/R/imports.R |only netdiffuseR-1.17.0/netdiffuseR/R/infect_suscept.R |only netdiffuseR-1.17.0/netdiffuseR/R/moran.R |only netdiffuseR-1.17.0/netdiffuseR/R/package-doc.R |only netdiffuseR-1.17.0/netdiffuseR/R/rewire.R |only netdiffuseR-1.17.0/netdiffuseR/inst/extdata/sampson.##d |only netdiffuseR-1.17.0/netdiffuseR/inst/extdata/sampson.##h |only netdiffuseR-1.17.0/netdiffuseR/man/macros |only netdiffuseR-1.18.0/netdiffuseR/ChangeLog | 100 +++ netdiffuseR-1.18.0/netdiffuseR/DESCRIPTION | 48 - netdiffuseR-1.18.0/netdiffuseR/MD5 | 261 +++++----- netdiffuseR-1.18.0/netdiffuseR/NAMESPACE | 38 + netdiffuseR-1.18.0/netdiffuseR/R/RcppExports.R | 90 +-- netdiffuseR-1.18.0/netdiffuseR/R/adjmat.r |only netdiffuseR-1.18.0/netdiffuseR/R/bass.r |only netdiffuseR-1.18.0/netdiffuseR/R/bootnet.r |only netdiffuseR-1.18.0/netdiffuseR/R/data.r |only netdiffuseR-1.18.0/netdiffuseR/R/diffnet-c.R | 2 netdiffuseR-1.18.0/netdiffuseR/R/diffnet-class.R | 47 - 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netdiffuseR-1.18.0/netdiffuseR/tests/testthat/test-struct_test.R | 2 netdiffuseR-1.18.0/netdiffuseR/vignettes/analyzing-medical-innovation-data.Rmd | 8 152 files changed, 1977 insertions(+), 919 deletions(-)
Title: Data Management and Analysis of Tests
Description: A system for the management, assessment, and psychometric analysis of data from educational and psychological tests. Developed at Cito, The Netherlands, with subsidy from the Dutch Ministry of Education, Culture, and Science.
Author: Gunter Maris, Timo Bechger, Jesse Koops, Ivailo Partchev
Maintainer: Ivailo Partchev <Ivailo.Partchev@cito.nl>
Diff between dexter versions 0.1.7 dated 2017-02-08 and 0.4.2 dated 2017-07-18
dexter-0.1.7/dexter/man/add_tests.Rd |only dexter-0.1.7/dexter/man/fit_models.Rd |only dexter-0.1.7/dexter/src/enorm.c |only dexter-0.1.7/dexter/src/enorm.h |only dexter-0.1.7/dexter/vignettes/verbalAggression.db |only dexter-0.4.2/dexter/DESCRIPTION | 25 dexter-0.4.2/dexter/MD5 | 122 dexter-0.4.2/dexter/NAMESPACE | 60 dexter-0.4.2/dexter/NEWS |only dexter-0.4.2/dexter/R/anon.R |only dexter-0.4.2/dexter/R/d3c.R |only dexter-0.4.2/dexter/R/database.R |only dexter-0.4.2/dexter/R/dexter.R | 2562 +++++----- dexter-0.4.2/dexter/R/individual_differences.R |only dexter-0.4.2/dexter/R/oplike.R |only dexter-0.4.2/dexter/build/partial.rdb |only dexter-0.4.2/dexter/build/vignette.rds |binary dexter-0.4.2/dexter/inst/REFERENCES.bib |only dexter-0.4.2/dexter/inst/doc/Plausible_Values.R |only dexter-0.4.2/dexter/inst/doc/Plausible_Values.Rmd |only dexter-0.4.2/dexter/inst/doc/Plausible_Values.html |only dexter-0.4.2/dexter/inst/doc/Test_Individual_differences.R |only dexter-0.4.2/dexter/inst/doc/Test_Individual_differences.Rmd |only dexter-0.4.2/dexter/inst/doc/Test_Individual_differences.html |only dexter-0.4.2/dexter/inst/doc/data_management.R |only dexter-0.4.2/dexter/inst/doc/data_management.Rmd |only dexter-0.4.2/dexter/inst/doc/data_management.html |only dexter-0.4.2/dexter/inst/doc/dexter.R | 31 dexter-0.4.2/dexter/inst/doc/dexter.Rmd | 120 dexter-0.4.2/dexter/inst/doc/dexter.html | 445 + dexter-0.4.2/dexter/inst/doc/profile-plots.R | 13 dexter-0.4.2/dexter/inst/doc/profile-plots.Rmd | 14 dexter-0.4.2/dexter/inst/doc/profile-plots.html | 18 dexter-0.4.2/dexter/inst/extdata |only dexter-0.4.2/dexter/man/DIF.Rd |only dexter-0.4.2/dexter/man/PISA_item_class.Rd | 3 dexter-0.4.2/dexter/man/ability.Rd |only dexter-0.4.2/dexter/man/add_booklet.Rd | 40 dexter-0.4.2/dexter/man/add_item_properties.Rd | 32 dexter-0.4.2/dexter/man/add_test3DC.Rd |only dexter-0.4.2/dexter/man/as.data.frame.prms.Rd |only dexter-0.4.2/dexter/man/create3DC.Rd |only dexter-0.4.2/dexter/man/design_as_network.Rd |only dexter-0.4.2/dexter/man/design_is_connected.Rd |only dexter-0.4.2/dexter/man/distractor_plot.Rd | 13 dexter-0.4.2/dexter/man/fit_domains.Rd | 37 dexter-0.4.2/dexter/man/fit_enorm.Rd |only dexter-0.4.2/dexter/man/fit_inter.Rd |only dexter-0.4.2/dexter/man/get_responses.Rd |only dexter-0.4.2/dexter/man/get_testscores.Rd |only dexter-0.4.2/dexter/man/iModels.Rd |only dexter-0.4.2/dexter/man/iTIA.Rd |only dexter-0.4.2/dexter/man/individual_differences.Rd |only dexter-0.4.2/dexter/man/keys_to_rules.Rd | 8 dexter-0.4.2/dexter/man/open_project.Rd | 11 dexter-0.4.2/dexter/man/plausible_values.Rd |only dexter-0.4.2/dexter/man/plot.rim.Rd | 8 dexter-0.4.2/dexter/man/plot3DC.Rd |only dexter-0.4.2/dexter/man/predicate_variables.Rd |only dexter-0.4.2/dexter/man/print.prms.Rd |only dexter-0.4.2/dexter/man/print.rim.Rd | 8 dexter-0.4.2/dexter/man/profile_plot.Rd | 46 dexter-0.4.2/dexter/man/show_booklets.Rd | 7 dexter-0.4.2/dexter/man/show_design.Rd |only dexter-0.4.2/dexter/man/show_item_properties.Rd | 6 dexter-0.4.2/dexter/man/show_items.Rd | 12 dexter-0.4.2/dexter/man/show_person_properties.Rd | 8 dexter-0.4.2/dexter/man/show_persons.Rd |only dexter-0.4.2/dexter/man/show_rules.Rd |only dexter-0.4.2/dexter/man/start_new_project.Rd | 33 dexter-0.4.2/dexter/man/start_new_project_from_oplm.Rd |only dexter-0.4.2/dexter/man/tia_tables.Rd | 31 dexter-0.4.2/dexter/man/touch_rules.Rd |only dexter-0.4.2/dexter/man/verbAggrData.Rd | 3 dexter-0.4.2/dexter/man/verbAggrProperties.Rd | 3 dexter-0.4.2/dexter/man/verbAggrRules.Rd | 3 dexter-0.4.2/dexter/src/elsymean.c |only dexter-0.4.2/dexter/src/elsymean.h |only dexter-0.4.2/dexter/src/packagename_init.c |only dexter-0.4.2/dexter/src/pascal.c |only dexter-0.4.2/dexter/src/pascal.h |only dexter-0.4.2/dexter/src/roger.c |only dexter-0.4.2/dexter/src/roger.h |only dexter-0.4.2/dexter/vignettes/Plausible_Values.Rmd |only dexter-0.4.2/dexter/vignettes/Test_Individual_differences.Rmd |only dexter-0.4.2/dexter/vignettes/data_management.Rmd |only dexter-0.4.2/dexter/vignettes/dexter.Rmd | 120 dexter-0.4.2/dexter/vignettes/irtools.bib | 32 dexter-0.4.2/dexter/vignettes/profile-plots.Rmd | 14 89 files changed, 2334 insertions(+), 1554 deletions(-)
Title: Fetch Hillary Rodham Clinton's Emails
Description: Fetch and process Hillary Rodham Clinton's "personal" emails.
Author: John Coene [aut, cre]
Maintainer: John Coene <jcoenep@gmail.com>
Diff between rodham versions 0.1.0 dated 2017-07-14 and 0.1.1 dated 2017-07-18
DESCRIPTION | 9 +++++---- MD5 | 28 +++++++++++++++------------- NAMESPACE | 3 +++ NEWS.md | 11 +++++++++++ R/get.R | 46 ++++++++++++++++++++++++++++++++++++++++------ R/load.R | 25 +++++++++++++++++++++++++ R/rodham.R | 12 +++++++++--- R/utils.R | 7 +++++-- README.md | 10 ++++------ data/emails.rda |binary inst/doc/how-to.Rmd | 4 ++++ inst/doc/how-to.html | 12 ++++++++---- man/get_id.Rd |only man/rodham.Rd | 12 +++++++++--- man/tidy_emails.Rd |only vignettes/how-to.Rmd | 4 ++++ 16 files changed, 142 insertions(+), 41 deletions(-)
Title: Visualization Package for CanvasXpress in R
Description: Enables creation of visualizations using the CanvasXpress framework
in R. CanvasXpress is a standalone JavaScript library for reproducible research
with complete tracking of data and end-user modifications stored in a single
PNG image that can be played back. See <http://canvasxpress.org> for more
information.
Author: Isaac Neuhaus [aut, cre],
Connie Brett [ctb]
Maintainer: Connie Brett <connie@aggregate-genius.com>
Diff between canvasXpress versions 0.16.2 dated 2017-06-02 and 0.16.6 dated 2017-07-18
DESCRIPTION | 10 ++--- MD5 | 35 +++++++++--------- NEWS.md | 3 + R/canvasXpress.R | 4 +- README.md | 12 ++++-- build/vignette.rds |binary inst/doc/additional_examples.html | 4 +- inst/doc/getting_started.Rmd | 2 - inst/doc/getting_started.html | 4 +- inst/htmlwidgets/canvasXpress.yaml | 2 - inst/htmlwidgets/lib/canvasXpress/canvasXpress.css | 1 inst/htmlwidgets/lib/canvasXpress/canvasXpress.min.js | 4 +- man/canvasXpress-package.Rd | 2 - man/canvasXpress.Rd | 5 +- man/canvasXpressOutput.Rd | 1 man/cxShinyExample.Rd | 1 man/renderCanvasXpress.Rd | 1 vignettes/getting_started.Rmd | 2 - vignettes/images/brand3.png |only 19 files changed, 49 insertions(+), 44 deletions(-)
Title: Box-Cox Power Transformation
Description: Performs Box-Cox power transformation for different purposes, graphical approaches, assesses the success of the transformation via tests and plots, computes mean and confidence interval for back transformed data.
Author: Osman Dag [aut, cre], Ozgur Asar [aut], Ozlem Ilk [aut]
Maintainer: Osman Dag <osman.dag@hacettepe.edu.tr>
Diff between AID versions 2.1 dated 2017-07-11 and 2.2 dated 2017-07-18
AID-2.1/AID/man/confInt.Rd |only AID-2.2/AID/DESCRIPTION | 8 ++++---- AID-2.2/AID/MD5 | 12 +++++++----- AID-2.2/AID/NAMESPACE | 5 ++--- AID-2.2/AID/R/boxcoxlm.R |only AID-2.2/AID/R/boxcoxnc.R | 4 ++-- AID-2.2/AID/R/confInt.R | 2 -- AID-2.2/AID/man/boxcoxlm.Rd |only AID-2.2/AID/man/confInt.boxcoxnc.Rd |only 9 files changed, 15 insertions(+), 16 deletions(-)