Title: Use and Explore CRU CL v. 2.0 Climatology Elements in R
Description: Provides functions that automate downloading and importing
University of East Anglia Climate Research Unit (CRU) CL v. 2.0 climatology
data into R, facilitates the calculation of minimum temperature and maximum
temperature and formats the data into a tidy data frame as a tibble or a
list of raster stack objects for use in an R session. CRU CL v. 2.0 data
are a gridded climatology of 1961-1990 monthly means released in 2002 and
cover all land areas (excluding Antarctica) at 10 arcminutes
(0.1666667 degree) resolution. For more information see the description of
the data provided by the University of East Anglia Climate Research Unit,
<https://crudata.uea.ac.uk/cru/data/hrg/tmc/readme.txt>.
Author: Adam Sparks [aut, cre] (http://orcid.org/0000-0002-0061-8359)
Maintainer: Adam Sparks <adamhsparks@gmail.com>
Diff between getCRUCLdata versions 0.1.8 dated 2017-07-08 and 0.1.9 dated 2017-08-18
DESCRIPTION | 6 ++-- MD5 | 17 ++++++------ NEWS.md | 5 +++ R/manage_cached_files.R | 56 ++++++++++++++++++++++++++++++------------ README.md | 2 - inst/doc/getCRUCLdata.Rmd | 4 +-- inst/doc/getCRUCLdata.html | 4 +-- tests/testthat/test-get_CRU.R | 13 +++++---- tests/testthat/test_caching.R |only vignettes/getCRUCLdata.Rmd | 4 +-- 10 files changed, 71 insertions(+), 40 deletions(-)
Title: Global Summary Daily Weather Data in R
Description: Provides automated downloading, parsing, cleaning, unit conversion
and formatting of Global Surface Summary of the Day (GSOD) weather data from
the from the USA National Centers for Environmental Information (NCEI) for
use in R. Units are converted from from United States Customary System
(USCS) units to International System of Units (SI). Stations may be
individually checked for number of missing days defined by the user, where
stations with too many missing observations are omitted. Only stations with
valid reported latitude and longitude values are permitted in the final
data. Additional useful elements, saturation vapour pressure (es), actual
vapour pressure (ea) and relative humidity are calculated from the original
data and included in the final data set. The resulting data include station
identification information, state, country, latitude, longitude, elevation,
weather observations and associated flags. Data may be automatically saved
to disk. File output may be returned as a comma-separated values (CSV) or
GeoPackage (GPKG) file. Additional data are included with this R package: a
list of elevation values for stations between -60 and 60 degrees latitude
derived from the Shuttle Radar Topography Measuring Mission (SRTM). For
information on the GSOD data from NCEI, please see the GSOD readme.txt file
available from, <http://www1.ncdc.noaa.gov/pub/data/gsod/readme.txt>.
Author: Adam Sparks [aut, cre] (http://orcid.org/0000-0002-0061-8359),
Tomislav Hengl [aut] (http://orcid.org/0000-0002-9921-5129),
Andrew Nelson [aut] (http://orcid.org/0000-0002-7249-3778)
Maintainer: Adam Sparks <adamhsparks@gmail.com>
Diff between GSODR versions 1.0.4 dated 2017-07-23 and 1.0.5 dated 2017-08-18
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 18 ++++++++++++++++++ R/get_GSOD.R | 11 ++++++----- R/zzz.R | 14 ++++++++++++++ README.md | 1 + inst/doc/GSODR.html | 2 +- inst/extdata/isd_history.rda |binary tests/testthat/test-get_GSOD.R | 18 ------------------ 9 files changed, 51 insertions(+), 35 deletions(-)
Title: Analysis of Visual Meteor Data
Description: Functions for selection of visual meteor data, calculations of Zenithal Hourly Rate (ZHR) and population index, graphics of population index, ZHR and magnitude distribution.
Author: Kristina Veljkovic
Maintainer: Kristina Veljkovic <mackikac@gmail.com>
Diff between MetFns versions 2.2.0 dated 2017-02-01 and 3.0.0 dated 2017-08-18
MetFns-2.2.0/MetFns/R/dec.time.R |only MetFns-2.2.0/MetFns/R/filter.F.R |only MetFns-2.2.0/MetFns/R/filter.datetime.R |only MetFns-2.2.0/MetFns/R/filter.imocode.R |only MetFns-2.2.0/MetFns/R/max.day.R |only MetFns-2.2.0/MetFns/data/datalist |only MetFns-2.2.0/MetFns/data/magn00.rda |only MetFns-2.2.0/MetFns/data/magn01.rda |only MetFns-2.2.0/MetFns/data/magn04.rda |only MetFns-2.2.0/MetFns/data/magn05.rda |only MetFns-2.2.0/MetFns/data/magn06.rda |only MetFns-2.2.0/MetFns/data/magn07.rda |only MetFns-2.2.0/MetFns/data/magn08.rda |only MetFns-2.2.0/MetFns/data/magn09.rda |only MetFns-2.2.0/MetFns/data/magn10.rda |only MetFns-2.2.0/MetFns/data/magn11.rda |only MetFns-2.2.0/MetFns/data/magn95.rda |only MetFns-2.2.0/MetFns/data/magn97.rda |only MetFns-2.2.0/MetFns/data/magn98.rda |only MetFns-2.2.0/MetFns/data/magn99.rda |only MetFns-2.2.0/MetFns/data/rate00.rda |only MetFns-2.2.0/MetFns/data/rate01.rda |only MetFns-2.2.0/MetFns/data/rate02.rda |only MetFns-2.2.0/MetFns/data/rate04.rda |only MetFns-2.2.0/MetFns/data/rate05.rda |only MetFns-2.2.0/MetFns/data/rate06.rda |only MetFns-2.2.0/MetFns/data/rate07.rda |only MetFns-2.2.0/MetFns/data/rate08.rda |only MetFns-2.2.0/MetFns/data/rate09.rda |only MetFns-2.2.0/MetFns/data/rate10.rda |only MetFns-2.2.0/MetFns/data/rate11.rda |only MetFns-2.2.0/MetFns/data/rate95.rda |only MetFns-2.2.0/MetFns/data/rate96.rda |only MetFns-2.2.0/MetFns/data/rate97.rda |only MetFns-2.2.0/MetFns/data/rate98.rda |only MetFns-2.2.0/MetFns/data/rate99.rda |only MetFns-2.2.0/MetFns/data/vmdbpers.rda |only MetFns-2.2.0/MetFns/data/vmdbsite.rda |only MetFns-2.2.0/MetFns/man/filter.F.Rd |only MetFns-2.2.0/MetFns/man/filter.datetime.Rd |only MetFns-2.2.0/MetFns/man/filter.imocode.Rd |only MetFns-2.2.0/MetFns/man/magn00.Rd |only MetFns-2.2.0/MetFns/man/magn01.Rd |only MetFns-2.2.0/MetFns/man/magn04.Rd |only MetFns-2.2.0/MetFns/man/magn05.Rd |only MetFns-2.2.0/MetFns/man/magn06.Rd |only MetFns-2.2.0/MetFns/man/magn07.Rd |only MetFns-2.2.0/MetFns/man/magn08.Rd |only MetFns-2.2.0/MetFns/man/magn09.Rd |only MetFns-2.2.0/MetFns/man/magn10.Rd |only MetFns-2.2.0/MetFns/man/magn11.Rd |only MetFns-2.2.0/MetFns/man/magn95.Rd |only MetFns-2.2.0/MetFns/man/magn97.Rd |only MetFns-2.2.0/MetFns/man/magn98.Rd |only MetFns-2.2.0/MetFns/man/magn99.Rd |only MetFns-2.2.0/MetFns/man/rate00.Rd |only MetFns-2.2.0/MetFns/man/rate01.Rd |only MetFns-2.2.0/MetFns/man/rate02.Rd |only MetFns-2.2.0/MetFns/man/rate04.Rd |only MetFns-2.2.0/MetFns/man/rate05.Rd |only MetFns-2.2.0/MetFns/man/rate06.Rd |only MetFns-2.2.0/MetFns/man/rate07.Rd |only MetFns-2.2.0/MetFns/man/rate08.Rd |only MetFns-2.2.0/MetFns/man/rate09.Rd |only MetFns-2.2.0/MetFns/man/rate10.Rd |only MetFns-2.2.0/MetFns/man/rate11.Rd |only MetFns-2.2.0/MetFns/man/rate95.Rd |only MetFns-2.2.0/MetFns/man/rate96.Rd |only MetFns-2.2.0/MetFns/man/rate97.Rd |only MetFns-2.2.0/MetFns/man/rate98.Rd |only MetFns-2.2.0/MetFns/man/rate99.Rd |only MetFns-2.2.0/MetFns/man/vmdbpers.Rd |only MetFns-2.2.0/MetFns/man/vmdbsite.Rd |only MetFns-3.0.0/MetFns/DESCRIPTION | 11 - MetFns-3.0.0/MetFns/MD5 | 182 ++++++++++------------------- MetFns-3.0.0/MetFns/NAMESPACE | 8 - MetFns-3.0.0/MetFns/R/correct.F.R |only MetFns-3.0.0/MetFns/R/date_sollong.R |only MetFns-3.0.0/MetFns/R/deltaT.R | 3 MetFns-3.0.0/MetFns/R/filter.P.R |only MetFns-3.0.0/MetFns/R/filter.R | 39 ++---- MetFns-3.0.0/MetFns/R/filter.country.R | 5 MetFns-3.0.0/MetFns/R/filter.date.R |only MetFns-3.0.0/MetFns/R/filter.gc.R | 11 - MetFns-3.0.0/MetFns/R/filter.h.R | 7 - MetFns-3.0.0/MetFns/R/filter.mag.R | 6 MetFns-3.0.0/MetFns/R/filter.obsname.R | 14 -- MetFns-3.0.0/MetFns/R/filter.shw.R | 14 -- MetFns-3.0.0/MetFns/R/filter.site.R | 5 MetFns-3.0.0/MetFns/R/filter.sol.R | 17 +- MetFns-3.0.0/MetFns/R/filter.totcor.R | 8 - MetFns-3.0.0/MetFns/R/graph.data.R | 2 MetFns-3.0.0/MetFns/R/mag.distr.r | 7 - MetFns-3.0.0/MetFns/R/midint.R | 30 ---- MetFns-3.0.0/MetFns/R/opt.bin.R |only MetFns-3.0.0/MetFns/R/pop.index.R | 140 +++++++++------------- MetFns-3.0.0/MetFns/R/pop.index.plot.R |only MetFns-3.0.0/MetFns/R/pop.index2.R | 117 +++++++----------- MetFns-3.0.0/MetFns/R/rerr.reg.R |only MetFns-3.0.0/MetFns/R/sinh.R | 43 +++--- MetFns-3.0.0/MetFns/R/solar.long.R | 33 ----- MetFns-3.0.0/MetFns/R/solar.long_date.R |only MetFns-3.0.0/MetFns/R/sollong_date.R | 58 ++++++--- MetFns-3.0.0/MetFns/R/zhr.R | 95 +++++---------- MetFns-3.0.0/MetFns/R/zhr.plot.R |only MetFns-3.0.0/MetFns/data/magn2015.rda |only MetFns-3.0.0/MetFns/data/popind.err.rda |binary MetFns-3.0.0/MetFns/data/popind.rda |binary MetFns-3.0.0/MetFns/data/radiant.rda |binary MetFns-3.0.0/MetFns/data/rate2015.rda |only MetFns-3.0.0/MetFns/data/shw_list.rda |binary MetFns-3.0.0/MetFns/man/MetFns-package.Rd | 4 MetFns-3.0.0/MetFns/man/date_sollong.Rd |only MetFns-3.0.0/MetFns/man/filter.P.Rd |only MetFns-3.0.0/MetFns/man/filter.Rd | 121 ++++++------------- MetFns-3.0.0/MetFns/man/filter.country.Rd | 23 --- MetFns-3.0.0/MetFns/man/filter.date.Rd |only MetFns-3.0.0/MetFns/man/filter.gc.Rd | 56 +++----- MetFns-3.0.0/MetFns/man/filter.h.Rd | 33 +---- MetFns-3.0.0/MetFns/man/filter.mag.Rd | 34 +---- MetFns-3.0.0/MetFns/man/filter.obsname.Rd | 32 +---- MetFns-3.0.0/MetFns/man/filter.shw.Rd | 23 --- MetFns-3.0.0/MetFns/man/filter.site.Rd | 21 --- MetFns-3.0.0/MetFns/man/filter.sol.Rd | 29 +--- MetFns-3.0.0/MetFns/man/filter.totcor.Rd | 33 +---- MetFns-3.0.0/MetFns/man/mag.distr.Rd | 36 +---- MetFns-3.0.0/MetFns/man/magn2015.Rd |only MetFns-3.0.0/MetFns/man/midint.Rd |only MetFns-3.0.0/MetFns/man/pop.index.Rd | 99 +++------------ MetFns-3.0.0/MetFns/man/pop.index.plot.Rd |only MetFns-3.0.0/MetFns/man/pop.index2.Rd | 119 ++++-------------- MetFns-3.0.0/MetFns/man/radiant.Rd | 51 +++++--- MetFns-3.0.0/MetFns/man/rate2015.Rd |only MetFns-3.0.0/MetFns/man/shw_list.Rd | 8 - MetFns-3.0.0/MetFns/man/solar.long.Rd | 43 +++--- MetFns-3.0.0/MetFns/man/sollong_date.Rd | 47 +++---- MetFns-3.0.0/MetFns/man/zhr.Rd | 177 ++++++++-------------------- MetFns-3.0.0/MetFns/man/zhr.plot.Rd |only 138 files changed, 653 insertions(+), 1191 deletions(-)
Title: Download, Edit and Transform Wind Data from GFS
Description: Tools for downloading, editing and transforming wind data from Global Forecast System (GFS, see <https://www.ncdc.noaa.gov/data-access/model-data/model-datasets/global-forcast-system-gfs>) of the USA's National Weather Service (NWS, see <http://www.weather.gov/>).
Author: Javier Fernández-López [aut, cre],
Klaus Schliep [aut]
Maintainer: Javier Fernández-López <jflopez@rjb.csic.es>
Diff between rWind versions 0.2.0 dated 2017-06-12 and 0.3.0 dated 2017-08-18
DESCRIPTION | 17 +- MD5 | 25 ++- NAMESPACE | 9 - NEWS |only R/wind_functions.R | 361 ++++++++++++++++--------------------------------- README.md |only data |only man/arrowDir.Rd | 15 +- man/flow.dispersion.Rd | 23 +-- man/rWind-package.Rd |only man/wind.dl.Rd | 10 - man/wind.fit.Rd | 12 - man/wind.mean.Rd | 25 +-- man/wind2raster.Rd | 14 + man/wind_data.Rd |only man/wind_series.Rd |only 16 files changed, 212 insertions(+), 299 deletions(-)
Title: A Handbook of Statistical Analyses Using R (3rd Edition)
Description: Functions, data sets, analyses and examples from the
third edition of the book
''A Handbook of Statistical Analyses Using R'' (Torsten Hothorn and Brian S.
Everitt, Chapman & Hall/CRC, 2014). The first chapter
of the book, which is entitled ''An Introduction to R'',
is completely included in this package, for all other chapters,
a vignette containing all data analyses is available. In addition,
Sweave source code for slides of selected chapters is included in
this package (see HSAUR3/inst/slides). The publishers web page is
'<http://www.crcpress.com/product/isbn/9781482204582>'.
Author: Torsten Hothorn and Brian S. Everitt
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between HSAUR3 versions 1.0-7 dated 2017-06-21 and 1.0-8 dated 2017-08-18
HSAUR3-1.0-7/HSAUR3/vignettes/longtable.sty |only HSAUR3-1.0-8/HSAUR3/DESCRIPTION | 17 - HSAUR3-1.0-8/HSAUR3/MD5 | 107 ++++------ HSAUR3-1.0-8/HSAUR3/build/vignette.rds |binary HSAUR3-1.0-8/HSAUR3/data/BCG.rda |binary HSAUR3-1.0-8/HSAUR3/data/CYGOB1.rda |binary HSAUR3-1.0-8/HSAUR3/data/Lanza.rda |binary HSAUR3-1.0-8/HSAUR3/data/birthdeathrates.rda |binary HSAUR3-1.0-8/HSAUR3/data/bladdercancer.rda |binary HSAUR3-1.0-8/HSAUR3/data/epilepsy.rda |binary HSAUR3-1.0-8/HSAUR3/data/foster.rda |binary HSAUR3-1.0-8/HSAUR3/data/heptathlon.rda |binary HSAUR3-1.0-8/HSAUR3/data/meteo.rda |binary HSAUR3-1.0-8/HSAUR3/data/orallesions.rda |binary HSAUR3-1.0-8/HSAUR3/data/phosphate.rda |binary HSAUR3-1.0-8/HSAUR3/data/pistonrings.rda |binary HSAUR3-1.0-8/HSAUR3/data/planets.rda |binary HSAUR3-1.0-8/HSAUR3/data/plasma.rda |binary HSAUR3-1.0-8/HSAUR3/data/polyps.rda |binary HSAUR3-1.0-8/HSAUR3/data/rearrests.rda |binary HSAUR3-1.0-8/HSAUR3/data/roomwidth.rda |binary HSAUR3-1.0-8/HSAUR3/data/schizophrenia.rda |binary HSAUR3-1.0-8/HSAUR3/data/schizophrenia2.rda |binary HSAUR3-1.0-8/HSAUR3/data/smoking.rda |binary HSAUR3-1.0-8/HSAUR3/data/students.rda |binary HSAUR3-1.0-8/HSAUR3/data/suicides.rda |binary HSAUR3-1.0-8/HSAUR3/data/toothpaste.rda |binary HSAUR3-1.0-8/HSAUR3/data/voting.rda |binary HSAUR3-1.0-8/HSAUR3/data/water.rda |binary HSAUR3-1.0-8/HSAUR3/data/watervoles.rda |binary HSAUR3-1.0-8/HSAUR3/data/waves.rda |binary HSAUR3-1.0-8/HSAUR3/data/weightgain.rda |binary HSAUR3-1.0-8/HSAUR3/inst/NEWS | 4 HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_analysing_longitudinal_dataI.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_analysing_longitudinal_dataII.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_analysis_of_variance.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_bayesian_inference.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_cluster_analysis.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_conditional_inference.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_density_estimation.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_errata.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_gam.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_graphical_display.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_introduction_to_R.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_logistic_regression_glm.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_meta_analysis.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_missing_values.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_multidimensional_scaling.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_multiple_linear_regression.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_principal_components_analysis.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_quantile_regression.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_recursive_partitioning.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_simple_inference.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_simultaneous_inference.pdf |binary HSAUR3-1.0-8/HSAUR3/inst/doc/Ch_survival_analysis.pdf |binary 55 files changed, 65 insertions(+), 63 deletions(-)
Title: A Handbook of Statistical Analyses Using R (1st Edition)
Description: Functions, data sets, analyses and examples from the book
''A Handbook of Statistical Analyses Using R'' (Brian S. Everitt and Torsten
Hothorn, Chapman & Hall/CRC, 2006). The first chapter
of the book, which is entitled ''An Introduction to R'',
is completely included in this package, for all other chapters,
a vignette containing all data analyses is available.
Author: Brian S. Everitt and Torsten Hothorn
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between HSAUR versions 1.3-8 dated 2017-06-21 and 1.3-9 dated 2017-08-18
HSAUR-1.3-8/HSAUR/vignettes/longtable.sty |only HSAUR-1.3-9/HSAUR/DESCRIPTION | 12 +- HSAUR-1.3-9/HSAUR/MD5 | 41 ++++------ HSAUR-1.3-9/HSAUR/build/vignette.rds |binary HSAUR-1.3-9/HSAUR/inst/NEWS | 4 HSAUR-1.3-9/HSAUR/inst/doc/Ch_analysing_longitudinal_dataI.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_analysing_longitudinal_dataII.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_analysis_of_variance.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_cluster_analysis.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_conditional_inference.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_density_estimation.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_errata.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_introduction_to_R.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_logistic_regression_glm.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_meta_analysis.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_multidimensional_scaling.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_multiple_linear_regression.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_principal_components_analysis.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_recursive_partitioning.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_simple_inference.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/Ch_survival_analysis.pdf |binary HSAUR-1.3-9/HSAUR/inst/doc/preface.pdf |binary 22 files changed, 30 insertions(+), 27 deletions(-)
Title: Explorer of World Population Prospects
Description: Explore data in the 'wpp2017' (or 2015, 2012, 2010) package using a 'shiny' interface.
Author: Hana Sevcikova <hanas@uw.edu>
Maintainer: Hana Sevcikova <hanas@uw.edu>
Diff between wppExplorer versions 2.1-0 dated 2017-06-29 and 2.1-1 dated 2017-08-18
ChangeLog | 4 ++++ DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/global.R | 3 ++- man/wppExplorer-package.Rd | 4 ++-- tests/testthat/test-indicators.R | 4 ++-- 6 files changed, 19 insertions(+), 14 deletions(-)
Title: Regularized Linear Models
Description: Algorithms for fitting model-based penalized coefficient paths. Currently the models include penalized Poisson, negative binomial, zero-inflated Poisson and zero-inflated negative binomial regression models. The penalties include least absolute shrinkage and selection operator (LASSO), smoothly clipped absolute deviation (SCAD) and minimax concave penalty (MCP), and each possibly combining with L_2 penalty.
Author: Zhu Wang, with contributions from Achim Zeileis, Simon Jackman, Brian Ripley, Trevor Hastie, Rob Tibshirani, Balasubramanian Narasimhan, Gil Chu and Patrick Breheny
Maintainer: Zhu Wang <zwang@connecticutchildrens.org>
Diff between mpath versions 0.2-4 dated 2016-08-30 and 0.3-3 dated 2017-08-18
DESCRIPTION | 10 MD5 | 59 +++-- NAMESPACE | 24 +- NEWS | 36 ++- R/cv.glmreg.R | 9 R/cv.glmregNegbin.R | 3 R/cv.nclreg.R |only R/cv.zipath.R | 3 R/glmreg.R | 41 +-- R/loglik.R | 4 R/ncl.R |only R/nclreg.R |only R/predict.glmreg.R | 4 R/zipath.R | 12 - build/vignette.rds |binary inst/CITATION |only inst/doc/german.pdf |binary man/cv.glmreg.Rd | 2 man/cv.glmregNB.Rd | 2 man/cv.glmreg_fit.Rd | 2 man/cv.nclreg.Rd |only man/cv.nclreg_fit.Rd |only man/cv.zipath.Rd | 1 man/glmreg.Rd | 2 man/glmreg_fit.Rd | 4 man/ncl.Rd |only man/ncl_fit.Rd |only man/nclreg.Rd |only man/nclreg_fit.Rd |only man/stan.Rd |only src/lmnetGLM.f | 194 ++++++++-------- src/lmnetGaussian.f | 596 ++++++++++++++++++++++++++++----------------------- src/midloop.f | 433 +++++-------------------------------- src/midloopGLM.f |only src/mpath_init.c |only src/outloop.f | 210 +++++++++++------ vignettes/mpath.bib | 6 37 files changed, 770 insertions(+), 887 deletions(-)
Title: Statistical Inference and Sensitivity Analysis for Instrumental
Variables Model
Description: Contains functions for carrying out instrumental variable
estimation of causal effects, including power analysis, sensitivity analysis,
and diagnostics.
Author: Yang Jiang, Hyunseung Kang, Dylan Small, and Qingyuan Zhao
Maintainer: Hyunseung Kang <hyunseung@stat.wisc.edu>
Diff between ivmodel versions 1.6 dated 2017-05-04 and 1.7 dated 2017-08-18
DESCRIPTION | 12 ++++++------ MD5 | 8 +++++--- NAMESPACE | 9 ++++++++- R/barplot.R |only build/partial.rdb |binary man/iv.diagnosis.Rd |only 6 files changed, 19 insertions(+), 10 deletions(-)
Title: Evaluation of Surrogate Endpoints in Clinical Trials
Description: In a clinical trial, it frequently occurs that the most credible outcome to evaluate the effectiveness of a new therapy (the true endpoint) is difficult to measure. In such a situation, it can be an effective strategy to replace the true endpoint by a (bio)marker that is easier to measure and that allows for a prediction of the treatment effect on the true endpoint (a surrogate endpoint). The package 'Surrogate' allows for an evaluation of the appropriateness of a candidate surrogate endpoint based on the meta-analytic, information-theoretic, and causal-inference frameworks. Part of this software has been developed using funding provided from the European Union's Seventh Framework Programme for research, technological development and demonstration under Grant Agreement no 602552.
Author: Wim Van der Elst, Paul Meyvisch, Ariel Alonso, Hannah M. Ensor, Christopher J. Weir & Geert Molenberghs
Maintainer: Wim Van der Elst <Wim.vanderelst@gmail.com>
Diff between Surrogate versions 0.2 dated 2017-06-05 and 0.4 dated 2017-08-18
DESCRIPTION | 8 ++-- MD5 | 18 +++++++---- NAMESPACE | 5 +-- NEWS | 5 +-- R/ECT.R |only R/ICA.BinCont.R | 78 +++++++++++++++++++++++++----------------------- data/CIGTS_BinCont.rda |only data/Schizo_BinCont.rda |only man/CIGTS_BinCont.Rd |only man/ECT.Rd |only man/ICABinCont.Rd | 22 ++++++------- man/Schizo_BinCont.Rd |only man/summary.gen.Rd | 2 + 13 files changed, 76 insertions(+), 62 deletions(-)
Title: Functions to Automate Downloading Geospatial Data Available from
Several Federated Data Sources
Description: Functions to automate downloading geospatial data available from
several federated data sources (mainly sources maintained by the US Federal
government). Currently, the package enables extraction from six datasets:
The National Elevation Dataset digital elevation models (1 and 1/3 arc-second;
USGS); The National Hydrography Dataset (USGS); The Soil Survey Geographic
(SSURGO) database from the National Cooperative Soil Survey (NCSS), which is
led by the Natural Resources Conservation Service (NRCS) under the USDA; the
Global Historical Climatology Network (GHCN), coordinated by National Climatic
Data Center at NOAA; the Daymet gridded estimates of daily weather parameters
for North America, version 3, available from the Oak Ridge National Laboratory's
Distributed Active Archive Center (DAAC); and the International Tree Ring Data Bank.
Author: R. Kyle Bocinsky [aut, cre], Dylan Beaudette [ctb], Scott Chamberlain [ctb]
Maintainer: R. Kyle Bocinsky <bocinsky@gmail.com>
Diff between FedData versions 2.4.5 dated 2017-03-01 and 2.4.6 dated 2017-08-18
FedData-2.4.5/FedData/inst/FedDataTester.R |only FedData-2.4.5/FedData/inst/img |only FedData-2.4.5/FedData/inst/test.R |only FedData-2.4.6/FedData/DESCRIPTION | 14 FedData-2.4.6/FedData/MD5 | 56 +-- FedData-2.4.6/FedData/NAMESPACE | 3 FedData-2.4.6/FedData/NEWS.md | 5 FedData-2.4.6/FedData/R/DAYMET_FUNCTIONS.R | 322 ++++++++++---------- FedData-2.4.6/FedData/R/GHCN_FUNCTIONS.R | 18 - FedData-2.4.6/FedData/R/ITRDB_FUNCTIONS.R | 2 FedData-2.4.6/FedData/R/SSURGO_FUNCTIONS.R | 4 FedData-2.4.6/FedData/R/UTILITY_FUNCTIONS.R | 25 - FedData-2.4.6/FedData/README.md | 110 +++--- FedData-2.4.6/FedData/inst/image |only FedData-2.4.6/FedData/man/download_data.Rd | 2 FedData-2.4.6/FedData/man/download_daymet_tile.Rd | 2 FedData-2.4.6/FedData/man/extract_ssurgo_data.Rd | 4 FedData-2.4.6/FedData/man/get_daymet.Rd | 2 FedData-2.4.6/FedData/man/get_daymet_tile.Rd | 2 FedData-2.4.6/FedData/man/get_ghcn_daily.Rd | 8 FedData-2.4.6/FedData/man/get_ghcn_daily_station.Rd | 8 FedData-2.4.6/FedData/man/get_ghcn_inventory.Rd | 2 FedData-2.4.6/FedData/man/get_itrdb.Rd | 2 FedData-2.4.6/FedData/tests/testthat/test.DAYMET.R | 4 24 files changed, 319 insertions(+), 276 deletions(-)
Title: R Interface to the DataONE REST API
Description: Provides read and write access to data and metadata from
the DataONE network <https://www.dataone.org> of data repositories.
Each DataONE repository implements a consistent repository application
programming interface. Users call methods in R to access these remote
repository functions, such as methods to query the metadata catalog, get
access to metadata for particular data packages, and read the data objects
from the data repository. Users can also insert and update data objects on
repositories that support these methods.
Author: Matthew B. Jones [aut, cre],
Peter Slaughter [aut],
Rob Nahf [aut],
Carl Boettiger [aut],
Chris Jones [aut],
Jordan Read [aut],
Lauren Walker [aut],
Edmund Hart [aut],
Scott Chamberlain [aut],
Regents of the University of California [cph]
Maintainer: Matthew B. Jones <jones@nceas.ucsb.edu>
Diff between dataone versions 2.0.1 dated 2016-08-29 and 2.1.0 dated 2017-08-18
dataone-2.0.1/dataone/vignettes/download-data_cache |only dataone-2.1.0/dataone/DESCRIPTION | 21 dataone-2.1.0/dataone/MD5 | 368 ++-- dataone-2.1.0/dataone/NAMESPACE | 6 dataone-2.1.0/dataone/NEWS | 32 dataone-2.1.0/dataone/R/AbstractTableDescriber.R | 2 dataone-2.1.0/dataone/R/AuthenticationManager.R | 420 ++-- dataone-2.1.0/dataone/R/CNode.R | 91 - dataone-2.1.0/dataone/R/D1Client.R | 893 ++++++++-- dataone-2.1.0/dataone/R/D1Node.R | 144 + dataone-2.1.0/dataone/R/D1Object.R | 2 dataone-2.1.0/dataone/R/MNode.R | 117 + dataone-2.1.0/dataone/R/auth_request.R | 43 dataone-2.1.0/dataone/README.md | 66 dataone-2.1.0/dataone/build/vignette.rds |binary dataone-2.1.0/dataone/inst/CITATION | 4 dataone-2.1.0/dataone/inst/doc/dataone-federation.R |only dataone-2.1.0/dataone/inst/doc/dataone-federation.Rmd |only dataone-2.1.0/dataone/inst/doc/dataone-federation.html |only dataone-2.1.0/dataone/inst/doc/dataone-overview.R | 76 dataone-2.1.0/dataone/inst/doc/dataone-overview.Rmd | 287 --- dataone-2.1.0/dataone/inst/doc/dataone-overview.html | 229 -- dataone-2.1.0/dataone/inst/doc/download-data.Rmd | 2 dataone-2.1.0/dataone/inst/doc/download-data.html | 17 dataone-2.1.0/dataone/inst/doc/known-issues.R |only dataone-2.1.0/dataone/inst/doc/known-issues.Rmd |only dataone-2.1.0/dataone/inst/doc/known-issues.html |only dataone-2.1.0/dataone/inst/doc/searching-dataone.html | 8 dataone-2.1.0/dataone/inst/doc/update-package.R |only dataone-2.1.0/dataone/inst/doc/update-package.Rmd |only dataone-2.1.0/dataone/inst/doc/update-package.html |only dataone-2.1.0/dataone/inst/doc/upload-data.R | 172 + dataone-2.1.0/dataone/inst/doc/upload-data.Rmd | 320 ++- dataone-2.1.0/dataone/inst/doc/upload-data.html | 200 +- dataone-2.1.0/dataone/inst/extdata/OwlNightj.csv |only dataone-2.1.0/dataone/inst/extdata/Strix-occidentalis-obs.csv |only dataone-2.1.0/dataone/inst/extdata/Strix-occidentalis-obs.csv.zip |only dataone-2.1.0/dataone/inst/extdata/WeatherInf.txt |only dataone-2.1.0/dataone/inst/extdata/collectionMethods.csv |only dataone-2.1.0/dataone/inst/extdata/d1c.rds |only dataone-2.1.0/dataone/inst/extdata/filterObs.R |only dataone-2.1.0/dataone/inst/extdata/filterSpecies.R |only dataone-2.1.0/dataone/inst/extdata/filteredSpecies.csv |only dataone-2.1.0/dataone/inst/extdata/filteredSpecies.csv.zip |only dataone-2.1.0/dataone/inst/extdata/output.csv |only dataone-2.1.0/dataone/inst/extdata/pkg.rds |only dataone-2.1.0/dataone/inst/extdata/strix-pacific-northwest.xml |only dataone-2.1.0/dataone/man/AbstractTableDescriber-class.Rd | 1 dataone-2.1.0/dataone/man/AuthenticationManager-class.Rd | 3 dataone-2.1.0/dataone/man/AuthenticationManager.Rd | 3 dataone-2.1.0/dataone/man/CNode-class.Rd | 3 dataone-2.1.0/dataone/man/CNode.Rd | 3 dataone-2.1.0/dataone/man/CertificateManager-class.Rd | 9 dataone-2.1.0/dataone/man/CertificateManager.Rd | 1 dataone-2.1.0/dataone/man/D1Client-class.Rd | 27 dataone-2.1.0/dataone/man/D1Client-initialize.Rd | 5 dataone-2.1.0/dataone/man/D1Client.Rd | 18 dataone-2.1.0/dataone/man/D1Node-class.Rd | 42 dataone-2.1.0/dataone/man/D1Node-initialize.Rd | 3 dataone-2.1.0/dataone/man/D1Node.Rd | 1 dataone-2.1.0/dataone/man/D1Object-class.Rd | 3 dataone-2.1.0/dataone/man/D1Object-initialize.Rd | 3 dataone-2.1.0/dataone/man/D1Object.Rd | 1 dataone-2.1.0/dataone/man/EMLParser-class.Rd | 2 dataone-2.1.0/dataone/man/EMLParser.Rd | 1 dataone-2.1.0/dataone/man/MNode-class.Rd | 3 dataone-2.1.0/dataone/man/MNode.Rd | 3 dataone-2.1.0/dataone/man/addData.Rd | 1 dataone-2.1.0/dataone/man/archive.Rd | 3 dataone-2.1.0/dataone/man/asDataFrame.Rd | 5 dataone-2.1.0/dataone/man/auth_delete.Rd | 1 dataone-2.1.0/dataone/man/auth_get.Rd | 1 dataone-2.1.0/dataone/man/auth_head.Rd | 1 dataone-2.1.0/dataone/man/auth_post.Rd | 1 dataone-2.1.0/dataone/man/auth_put.Rd | 1 dataone-2.1.0/dataone/man/auth_put_post_delete.Rd | 3 dataone-2.1.0/dataone/man/canRead.Rd | 3 dataone-2.1.0/dataone/man/convert.csv.Rd | 1 dataone-2.1.0/dataone/man/createD1Object.Rd | 3 dataone-2.1.0/dataone/man/createDataPackage.Rd | 5 dataone-2.1.0/dataone/man/createObject.Rd | 6 dataone-2.1.0/dataone/man/d1IdentifierSearch.Rd | 1 dataone-2.1.0/dataone/man/d1SolrQuery.Rd | 3 dataone-2.1.0/dataone/man/d1_errors.Rd | 1 dataone-2.1.0/dataone/man/data.characterEncoding.Rd | 2 dataone-2.1.0/dataone/man/data.formatFamily.Rd | 2 dataone-2.1.0/dataone/man/data.tableAttributeNames.Rd | 2 dataone-2.1.0/dataone/man/data.tableAttributeOrientation.Rd | 2 dataone-2.1.0/dataone/man/data.tableAttributeStorageTypes.Rd | 2 dataone-2.1.0/dataone/man/data.tableAttributeTypes.Rd | 2 dataone-2.1.0/dataone/man/data.tableFieldDelimiter.Rd | 2 dataone-2.1.0/dataone/man/data.tableMissingValueCodes.Rd | 2 dataone-2.1.0/dataone/man/data.tableQuoteCharacter.Rd | 2 dataone-2.1.0/dataone/man/data.tableSkipLinesHeader.Rd | 8 dataone-2.1.0/dataone/man/dataone-defunct.Rd | 2 dataone-2.1.0/dataone/man/dataone-deprecated.Rd | 2 dataone-2.1.0/dataone/man/dataone.Rd | 8 dataone-2.1.0/dataone/man/describeObject.Rd | 3 dataone-2.1.0/dataone/man/documented.d1Identifiers.Rd | 4 dataone-2.1.0/dataone/man/documented.entityNames.Rd | 2 dataone-2.1.0/dataone/man/documented.sizes.Rd | 2 dataone-2.1.0/dataone/man/downloadCert.Rd | 1 dataone-2.1.0/dataone/man/echoCredentials.Rd | 1 dataone-2.1.0/dataone/man/encodeSolr.Rd | 1 dataone-2.1.0/dataone/man/encodeUrlPath.Rd | 3 dataone-2.1.0/dataone/man/encodeUrlQuery.Rd | 3 dataone-2.1.0/dataone/man/evaluateAuth.Rd | 1 dataone-2.1.0/dataone/man/generateIdentifier.Rd | 3 dataone-2.1.0/dataone/man/getAuthExpires.Rd | 1 dataone-2.1.0/dataone/man/getAuthMethod.Rd | 1 dataone-2.1.0/dataone/man/getAuthSubject.Rd | 1 dataone-2.1.0/dataone/man/getCN.Rd | 1 dataone-2.1.0/dataone/man/getCapabilities.Rd | 3 dataone-2.1.0/dataone/man/getCert.Rd | 1 dataone-2.1.0/dataone/man/getCertExpires.Rd | 1 dataone-2.1.0/dataone/man/getCertInfo.Rd | 5 dataone-2.1.0/dataone/man/getCertLocation.Rd | 1 dataone-2.1.0/dataone/man/getChecksum.Rd | 1 dataone-2.1.0/dataone/man/getD1Object.Rd | 3 dataone-2.1.0/dataone/man/getData.Rd | 1 dataone-2.1.0/dataone/man/getDataObject.Rd | 18 dataone-2.1.0/dataone/man/getDataPackage.Rd |only dataone-2.1.0/dataone/man/getEndpoint.Rd | 1 dataone-2.1.0/dataone/man/getErrorDescription.Rd | 9 dataone-2.1.0/dataone/man/getFormat.Rd | 1 dataone-2.1.0/dataone/man/getFormatId.Rd | 1 dataone-2.1.0/dataone/man/getIdentifier.Rd | 1 dataone-2.1.0/dataone/man/getMN.Rd | 3 dataone-2.1.0/dataone/man/getMNode.Rd | 3 dataone-2.1.0/dataone/man/getMNodeId.Rd | 1 dataone-2.1.0/dataone/man/getMetadataMember.Rd |only dataone-2.1.0/dataone/man/getObject.Rd | 1 dataone-2.1.0/dataone/man/getPackage.Rd | 8 dataone-2.1.0/dataone/man/getQueryEngineDescription.Rd | 3 dataone-2.1.0/dataone/man/getSystemMetadata.Rd | 1 dataone-2.1.0/dataone/man/getToken.Rd | 1 dataone-2.1.0/dataone/man/getTokenInfo.Rd | 1 dataone-2.1.0/dataone/man/get_user_agent.Rd | 1 dataone-2.1.0/dataone/man/hasReservation.Rd | 3 dataone-2.1.0/dataone/man/isAuthExpired.Rd | 3 dataone-2.1.0/dataone/man/isAuthValid.Rd | 3 dataone-2.1.0/dataone/man/isAuthorized.Rd | 28 dataone-2.1.0/dataone/man/isCertExpired.Rd | 1 dataone-2.1.0/dataone/man/listFormats.Rd | 1 dataone-2.1.0/dataone/man/listMemberNodes.Rd | 1 dataone-2.1.0/dataone/man/listNodes.Rd | 1 dataone-2.1.0/dataone/man/listObjects.Rd | 1 dataone-2.1.0/dataone/man/listQueryEngines.Rd | 1 dataone-2.1.0/dataone/man/obscureAuth.Rd | 1 dataone-2.1.0/dataone/man/obscureCert.Rd | 1 dataone-2.1.0/dataone/man/parseCapabilities.Rd | 1 dataone-2.1.0/dataone/man/parseSolrResult.Rd | 1 dataone-2.1.0/dataone/man/ping.Rd | 1 dataone-2.1.0/dataone/man/query.Rd | 3 dataone-2.1.0/dataone/man/reserveIdentifier.Rd | 5 dataone-2.1.0/dataone/man/resolve.Rd | 1 dataone-2.1.0/dataone/man/restoreAuth.Rd | 1 dataone-2.1.0/dataone/man/restoreCert.Rd | 1 dataone-2.1.0/dataone/man/setMNodeId.Rd | 9 dataone-2.1.0/dataone/man/setObsoletedBy.Rd | 1 dataone-2.1.0/dataone/man/setPublicAccess.Rd | 1 dataone-2.1.0/dataone/man/showAuth.Rd | 1 dataone-2.1.0/dataone/man/showClientSubject.Rd | 1 dataone-2.1.0/dataone/man/updateObject.Rd | 6 dataone-2.1.0/dataone/man/updateSystemMetadata.Rd | 5 dataone-2.1.0/dataone/man/uploadDataObject.Rd | 5 dataone-2.1.0/dataone/man/uploadDataPackage.Rd | 12 dataone-2.1.0/dataone/tests/testthat/helper-base.R |only dataone-2.1.0/dataone/tests/testthat/test.AuthenticationManager.R | 2 dataone-2.1.0/dataone/tests/testthat/test.CNode.R | 92 - dataone-2.1.0/dataone/tests/testthat/test.CertificateManager.R | 14 dataone-2.1.0/dataone/tests/testthat/test.D1Client.R | 388 ++-- dataone-2.1.0/dataone/tests/testthat/test.D1Node.R | 68 dataone-2.1.0/dataone/tests/testthat/test.EMLParser.R | 2 dataone-2.1.0/dataone/tests/testthat/test.MNode.R | 227 +- dataone-2.1.0/dataone/tests/testthat/test.SystemMetadata.R | 44 dataone-2.1.0/dataone/tests/testthat/test.auth_request.R | 6 dataone-2.1.0/dataone/vignettes/dataone-federation.Rmd |only dataone-2.1.0/dataone/vignettes/dataone-overview.Rmd | 287 --- dataone-2.1.0/dataone/vignettes/download-data.Rmd | 2 dataone-2.1.0/dataone/vignettes/known-issues.Rmd |only dataone-2.1.0/dataone/vignettes/package-diagram.png |only dataone-2.1.0/dataone/vignettes/update-package.Rmd |only dataone-2.1.0/dataone/vignettes/upload-data.Rmd | 320 ++- 184 files changed, 3025 insertions(+), 2358 deletions(-)
Title: An Implementation of the Artificial Hydrocarbon Networks
Description: Implementation of the Artificial Hydrocarbon Networks for data
modeling.
Author: Jose Roberto Ayala Solares [aut, cre]
Maintainer: Jose Roberto Ayala Solares <ichbinjras@gmail.com>
Diff between ahnr versions 0.1.0 dated 2017-07-08 and 0.2.0 dated 2017-08-18
ahnr-0.1.0/ahnr/README.md |only ahnr-0.2.0/ahnr/DESCRIPTION | 6 - ahnr-0.2.0/ahnr/MD5 | 15 +--- ahnr-0.2.0/ahnr/NEWS.md | 5 + ahnr-0.2.0/ahnr/R/auxiliary.R | 2 ahnr-0.2.0/ahnr/inst/doc/ahn.R | 13 ++- ahnr-0.2.0/ahnr/inst/doc/ahn.Rmd | 13 ++- ahnr-0.2.0/ahnr/inst/doc/ahn.html | 137 +++++++++++++++++++------------------- ahnr-0.2.0/ahnr/vignettes/ahn.Rmd | 13 ++- 9 files changed, 110 insertions(+), 94 deletions(-)
Title: Environment for Evaluating Recommender Systems
Description: Processes standard recommendation datasets (e.g., a user-item rating matrix) as input and generates rating predictions and lists of recommended items. Standard algorithm implementations which are included in this package are the following: Global/Item/User-Average baselines, Weighted Slope One, Item-Based KNN, User-Based KNN, FunkSVD, BPR and weighted ALS. They can be assessed according to the standard offline evaluation methodology (Shani, et al. (2011) <doi:10.1007/978-0-387-85820-3_8>) for recommender systems using measures such as MAE, RMSE, Precision, Recall, F1, AUC, NDCG, RankScore and coverage measures. The package (Coba, et al.(2017) <doi: 10.1007/978-3-319-60042-0_36>) is intended for rapid prototyping of recommendation algorithms and education purposes.
Author: Ludovik Çoba [aut, cre, cph],
Markus Zanker [ctb],
Panagiotis Symeonidis [ctb]
Maintainer: Ludovik Çoba <Ludovik.Coba@inf.unibz.it>
Diff between rrecsys versions 0.9.5.4 dated 2016-06-27 and 0.9.7.1 dated 2017-08-18
rrecsys-0.9.5.4/rrecsys/R/getAUC.R |only rrecsys-0.9.5.4/rrecsys/R/getPrecRecall.R |only rrecsys-0.9.5.4/rrecsys/R/nDCG.R |only rrecsys-0.9.5.4/rrecsys/R/rankScore.R |only rrecsys-0.9.5.4/rrecsys/R/recommend.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/a2_dispacherregistry.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/a2_dispacherregistry.Rmd |only rrecsys-0.9.5.4/rrecsys/inst/doc/a2_dispacherregistry.html |only rrecsys-0.9.5.4/rrecsys/inst/doc/b3_itera.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/b3_itera.Rmd |only rrecsys-0.9.5.4/rrecsys/inst/doc/b3_itera.html |only rrecsys-0.9.5.4/rrecsys/inst/doc/b5_BPR.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/b5_BPR.Rmd |only rrecsys-0.9.5.4/rrecsys/inst/doc/b5_BPR.html |only rrecsys-0.9.5.4/rrecsys/inst/doc/b6_wALS.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/b6_wALS.Rmd |only rrecsys-0.9.5.4/rrecsys/inst/doc/b6_wALS.html |only rrecsys-0.9.5.4/rrecsys/inst/doc/b7_predictrecommend.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/b7_predictrecommend.Rmd |only rrecsys-0.9.5.4/rrecsys/inst/doc/b7_predictrecommend.html |only rrecsys-0.9.5.4/rrecsys/inst/doc/c1_evaluation.R |only rrecsys-0.9.5.4/rrecsys/inst/doc/c1_evaluation.Rmd |only rrecsys-0.9.5.4/rrecsys/inst/doc/c1_evaluation.html |only rrecsys-0.9.5.4/rrecsys/inst/doc/d1_extend.R |only rrecsys-0.9.5.4/rrecsys/man/recResultsClass.Rd |only rrecsys-0.9.5.4/rrecsys/vignettes/a2_dispacherregistry.Rmd |only rrecsys-0.9.5.4/rrecsys/vignettes/b3_itera.Rmd |only rrecsys-0.9.5.4/rrecsys/vignettes/b5_BPR.Rmd |only rrecsys-0.9.5.4/rrecsys/vignettes/b6_wALS.Rmd |only rrecsys-0.9.5.4/rrecsys/vignettes/b7_predictrecommend.Rmd |only rrecsys-0.9.5.4/rrecsys/vignettes/c1_evaluation.Rmd |only rrecsys-0.9.7.1/rrecsys/DESCRIPTION | 32 - rrecsys-0.9.7.1/rrecsys/MD5 | 226 ++++--- rrecsys-0.9.7.1/rrecsys/NAMESPACE | 34 - rrecsys-0.9.7.1/rrecsys/R/AAA_classes.R | 273 +++++++++ rrecsys-0.9.7.1/rrecsys/R/AAA_generics.R | 21 rrecsys-0.9.7.1/rrecsys/R/AAA_registry.R | 107 ++- rrecsys-0.9.7.1/rrecsys/R/ALG_BPR.R | 61 +- rrecsys-0.9.7.1/rrecsys/R/ALG_IB_kNN.R | 218 +++++-- rrecsys-0.9.7.1/rrecsys/R/ALG_UB_kNN.R |only rrecsys-0.9.7.1/rrecsys/R/ALG_average.R | 41 + rrecsys-0.9.7.1/rrecsys/R/ALG_funkSVD.R | 325 ++++++++--- rrecsys-0.9.7.1/rrecsys/R/ALG_mostpopular.R | 5 rrecsys-0.9.7.1/rrecsys/R/ALG_slopeOne.R |only rrecsys-0.9.7.1/rrecsys/R/ALG_wALS.R | 165 +++-- rrecsys-0.9.7.1/rrecsys/R/RcppExports.R |only rrecsys-0.9.7.1/rrecsys/R/ZZZ.R | 5 rrecsys-0.9.7.1/rrecsys/R/calcBias.R | 66 ++ rrecsys-0.9.7.1/rrecsys/R/convergence.R | 224 ++++--- rrecsys-0.9.7.1/rrecsys/R/defineData.R | 46 - rrecsys-0.9.7.1/rrecsys/R/defineMat.R |only rrecsys-0.9.7.1/rrecsys/R/defineSparseMat.R |only rrecsys-0.9.7.1/rrecsys/R/evalModel.R | 137 +++- rrecsys-0.9.7.1/rrecsys/R/evalPred.R | 189 ++++-- rrecsys-0.9.7.1/rrecsys/R/evalRec.R | 368 ++++++++++--- rrecsys-0.9.7.1/rrecsys/R/eval_getAUC.R |only rrecsys-0.9.7.1/rrecsys/R/eval_getPrecRecall.R |only rrecsys-0.9.7.1/rrecsys/R/eval_nDCG.R |only rrecsys-0.9.7.1/rrecsys/R/eval_rankScore.R |only rrecsys-0.9.7.1/rrecsys/R/freq_topN.R |only rrecsys-0.9.7.1/rrecsys/R/plot.R |only rrecsys-0.9.7.1/rrecsys/R/plot_PopDist_freq.R |only rrecsys-0.9.7.1/rrecsys/R/plot_histogram.R |only rrecsys-0.9.7.1/rrecsys/R/plot_longtail.R |only rrecsys-0.9.7.1/rrecsys/R/plot_topN_popularity.R |only rrecsys-0.9.7.1/rrecsys/R/prediction.R | 153 ++--- rrecsys-0.9.7.1/rrecsys/R/recommendHPR.R |only rrecsys-0.9.7.1/rrecsys/R/recommendMF.R |only rrecsys-0.9.7.1/rrecsys/R/rrecsys.R | 18 rrecsys-0.9.7.1/rrecsys/R/some_handy_functions.R | 70 -- rrecsys-0.9.7.1/rrecsys/build/vignette.rds |binary rrecsys-0.9.7.1/rrecsys/data/datalist | 4 rrecsys-0.9.7.1/rrecsys/data/ml100k.rda |only rrecsys-0.9.7.1/rrecsys/data/ml100k_array.rda |only rrecsys-0.9.7.1/rrecsys/inst/doc/a0_intro.Rmd | 39 - rrecsys-0.9.7.1/rrecsys/inst/doc/a0_intro.html | 47 + rrecsys-0.9.7.1/rrecsys/inst/doc/a1_dataset.R | 39 - rrecsys-0.9.7.1/rrecsys/inst/doc/a1_dataset.Rmd | 57 +- rrecsys-0.9.7.1/rrecsys/inst/doc/a1_dataset.html | 59 +- rrecsys-0.9.7.1/rrecsys/inst/doc/a2_evaluation.R |only rrecsys-0.9.7.1/rrecsys/inst/doc/a2_evaluation.Rmd |only rrecsys-0.9.7.1/rrecsys/inst/doc/a2_evaluation.html |only rrecsys-0.9.7.1/rrecsys/inst/doc/b1_nonpersonalized.R | 29 - rrecsys-0.9.7.1/rrecsys/inst/doc/b1_nonpersonalized.Rmd | 39 - rrecsys-0.9.7.1/rrecsys/inst/doc/b1_nonpersonalized.html | 45 - rrecsys-0.9.7.1/rrecsys/inst/doc/b2_IBCF.R | 21 rrecsys-0.9.7.1/rrecsys/inst/doc/b2_IBCF.Rmd | 43 + rrecsys-0.9.7.1/rrecsys/inst/doc/b2_IBCF.html | 34 - rrecsys-0.9.7.1/rrecsys/inst/doc/b3_UBCF.R |only rrecsys-0.9.7.1/rrecsys/inst/doc/b3_UBCF.Rmd |only rrecsys-0.9.7.1/rrecsys/inst/doc/b3_UBCF.html |only rrecsys-0.9.7.1/rrecsys/inst/doc/b4_funkSVD.R | 21 rrecsys-0.9.7.1/rrecsys/inst/doc/b4_funkSVD.Rmd | 61 +- rrecsys-0.9.7.1/rrecsys/inst/doc/b4_funkSVD.html | 59 +- rrecsys-0.9.7.1/rrecsys/inst/doc/b5_wALS.R |only rrecsys-0.9.7.1/rrecsys/inst/doc/b5_wALS.Rmd |only rrecsys-0.9.7.1/rrecsys/inst/doc/b5_wALS.html |only rrecsys-0.9.7.1/rrecsys/inst/doc/b6_BPR.R |only rrecsys-0.9.7.1/rrecsys/inst/doc/b6_BPR.Rmd |only rrecsys-0.9.7.1/rrecsys/inst/doc/b6_BPR.html |only rrecsys-0.9.7.1/rrecsys/inst/doc/c1_dispacherregistry.R |only rrecsys-0.9.7.1/rrecsys/inst/doc/c1_dispacherregistry.Rmd |only rrecsys-0.9.7.1/rrecsys/inst/doc/c1_dispacherregistry.html |only rrecsys-0.9.7.1/rrecsys/inst/doc/c2_predictrecommend.R |only rrecsys-0.9.7.1/rrecsys/inst/doc/c2_predictrecommend.Rmd |only rrecsys-0.9.7.1/rrecsys/inst/doc/c2_predictrecommend.html |only rrecsys-0.9.7.1/rrecsys/inst/doc/d1_extend.Rmd | 15 rrecsys-0.9.7.1/rrecsys/inst/doc/d1_extend.html | 12 rrecsys-0.9.7.1/rrecsys/man/BPRclass.Rd | 56 - rrecsys-0.9.7.1/rrecsys/man/IBclass.Rd | 2 rrecsys-0.9.7.1/rrecsys/man/PPLclass.Rd | 1 rrecsys-0.9.7.1/rrecsys/man/SVDclass.Rd | 3 rrecsys-0.9.7.1/rrecsys/man/UBclass.Rd |only rrecsys-0.9.7.1/rrecsys/man/algAverageClass.Rd | 4 rrecsys-0.9.7.1/rrecsys/man/dataChart.Rd |only rrecsys-0.9.7.1/rrecsys/man/dataSet-class.Rd | 16 rrecsys-0.9.7.1/rrecsys/man/defineData.Rd | 21 rrecsys-0.9.7.1/rrecsys/man/ds-class.Rd |only rrecsys-0.9.7.1/rrecsys/man/evalChart.Rd |only rrecsys-0.9.7.1/rrecsys/man/evalModel-class.Rd | 50 - rrecsys-0.9.7.1/rrecsys/man/evalModel.Rd | 22 rrecsys-0.9.7.1/rrecsys/man/evalPred.Rd | 10 rrecsys-0.9.7.1/rrecsys/man/evalRecResults.Rd |only rrecsys-0.9.7.1/rrecsys/man/evalrec.Rd | 23 rrecsys-0.9.7.1/rrecsys/man/getAUC.Rd | 98 +-- rrecsys-0.9.7.1/rrecsys/man/histogram.Rd |only rrecsys-0.9.7.1/rrecsys/man/ml100k.Rd |only rrecsys-0.9.7.1/rrecsys/man/mlLatest100k.Rd | 12 rrecsys-0.9.7.1/rrecsys/man/nDCG.Rd | 6 rrecsys-0.9.7.1/rrecsys/man/predict.Rd | 8 rrecsys-0.9.7.1/rrecsys/man/rankScore.Rd | 74 +- rrecsys-0.9.7.1/rrecsys/man/recommend.Rd | 14 rrecsys-0.9.7.1/rrecsys/man/rrecsys.Rd | 45 + rrecsys-0.9.7.1/rrecsys/man/setStoppingCriteria.Rd | 118 ++-- rrecsys-0.9.7.1/rrecsys/man/slopeOneClass.Rd |only rrecsys-0.9.7.1/rrecsys/man/sparseDataSet-class.Rd |only rrecsys-0.9.7.1/rrecsys/man/wALSclass.Rd | 58 +- rrecsys-0.9.7.1/rrecsys/src |only rrecsys-0.9.7.1/rrecsys/vignettes/a0_intro.Rmd | 39 - rrecsys-0.9.7.1/rrecsys/vignettes/a1_dataset.Rmd | 57 +- rrecsys-0.9.7.1/rrecsys/vignettes/a2_evaluation.Rmd |only rrecsys-0.9.7.1/rrecsys/vignettes/b1_nonpersonalized.Rmd | 39 - rrecsys-0.9.7.1/rrecsys/vignettes/b2_IBCF.Rmd | 43 + rrecsys-0.9.7.1/rrecsys/vignettes/b3_UBCF.Rmd |only rrecsys-0.9.7.1/rrecsys/vignettes/b4_funkSVD.Rmd | 61 +- rrecsys-0.9.7.1/rrecsys/vignettes/b5_wALS.Rmd |only rrecsys-0.9.7.1/rrecsys/vignettes/b6_BPR.Rmd |only rrecsys-0.9.7.1/rrecsys/vignettes/c1_dispacherregistry.Rmd |only rrecsys-0.9.7.1/rrecsys/vignettes/c2_predictrecommend.Rmd |only rrecsys-0.9.7.1/rrecsys/vignettes/d1_extend.Rmd | 15 150 files changed, 2759 insertions(+), 1544 deletions(-)
Title: An Installation Framework for Shiny Apps
Description: Installs shiny apps using Inno Setup, an open source software that builds installers for Windows programs <http://www.jrsoftware.org/ishelp/>.
Author: Jon Hill [aut, cre, cph],
W. Lee Pang [aut, cph] (DesktopDeployR project at
https://github.com/wleepang/DesktopDeployR),
Hanjo Odendaal [ctb]
Maintainer: Jon Hill <jon.mark.hill@gmail.com>
Diff between RInno versions 0.0.3 dated 2017-03-31 and 0.1.0 dated 2017-08-18
RInno-0.0.3/RInno/R/create_pkgs.R |only RInno-0.0.3/RInno/man/create_pkgs.Rd |only RInno-0.1.0/RInno/DESCRIPTION | 19 RInno-0.1.0/RInno/MD5 | 91 ++-- RInno-0.1.0/RInno/NEWS.md | 8 RInno-0.1.0/RInno/R/create_app.R | 34 - RInno-0.1.0/RInno/R/create_config.R | 32 + RInno-0.1.0/RInno/R/directives.R | 7 RInno-0.1.0/RInno/R/example_app.R | 14 RInno-0.1.0/RInno/R/files.R | 8 RInno-0.1.0/RInno/R/flexdashboard_check.R |only RInno-0.1.0/RInno/R/get_R.R | 4 RInno-0.1.0/RInno/R/get_pandoc.R |only RInno-0.1.0/RInno/R/run.R | 3 RInno-0.1.0/RInno/R/setup.R | 4 RInno-0.1.0/RInno/README.md | 296 +++++++------- RInno-0.1.0/RInno/build/vignette.rds |binary RInno-0.1.0/RInno/inst/doc/Introduction.R | 2 RInno-0.1.0/RInno/inst/doc/Introduction.Rmd | 2 RInno-0.1.0/RInno/inst/doc/Introduction.html | 10 RInno-0.1.0/RInno/inst/doc/cont-installation.R | 48 +- RInno-0.1.0/RInno/inst/doc/cont-installation.Rmd | 55 +- RInno-0.1.0/RInno/inst/doc/cont-installation.html | 61 +- RInno-0.1.0/RInno/inst/flexdashboard_example |only RInno-0.1.0/RInno/inst/installation/app.R | 99 ++-- RInno-0.1.0/RInno/inst/installation/code.iss | 106 ++++- RInno-0.1.0/RInno/inst/installation/ensure.R | 27 + RInno-0.1.0/RInno/inst/installation/package_manager.R | 4 RInno-0.1.0/RInno/inst/installation/run.js | 20 RInno-0.1.0/RInno/man/code.Rd | 4 RInno-0.1.0/RInno/man/create_app.Rd | 17 RInno-0.1.0/RInno/man/create_bat.Rd | 2 RInno-0.1.0/RInno/man/create_config.Rd | 8 RInno-0.1.0/RInno/man/directives.Rd | 14 RInno-0.1.0/RInno/man/example_app.Rd | 6 RInno-0.1.0/RInno/man/files.Rd | 2 RInno-0.1.0/RInno/man/flexdashboard_check.Rd |only RInno-0.1.0/RInno/man/get_Pandoc.Rd |only RInno-0.1.0/RInno/man/get_R.Rd | 2 RInno-0.1.0/RInno/man/icons.Rd | 4 RInno-0.1.0/RInno/man/languages.Rd | 2 RInno-0.1.0/RInno/man/run.Rd | 4 RInno-0.1.0/RInno/man/setup.Rd | 4 RInno-0.1.0/RInno/man/start_iss.Rd | 2 RInno-0.1.0/RInno/man/tasks.Rd | 4 RInno-0.1.0/RInno/tests/testthat/test_copy_installation.R | 4 RInno-0.1.0/RInno/tests/testthat/test_create_config.R | 9 RInno-0.1.0/RInno/tests/testthat/test_directives.R | 2 RInno-0.1.0/RInno/vignettes/Introduction.Rmd | 2 RInno-0.1.0/RInno/vignettes/cont-installation.Rmd | 55 +- 50 files changed, 669 insertions(+), 432 deletions(-)
Title: Tools for Computation on Batch Systems
Description: As a successor of the packages 'BatchJobs' and 'BatchExperiments',
this package provides a parallel implementation of the Map function for high
performance computing systems managed by schedulers 'IBM Spectrum LSF'
(<http://www-03.ibm.com/systems/spectrum-computing/products/lsf/>),
'OpenLava' (<http://www.openlava.org/>), 'Univa Grid Engine'/'Oracle Grid
Engine' (<http://www.univa.com/>), 'Slurm' (<http://slurm.schedmd.com/>),
'TORQUE/PBS'
(<http://www.adaptivecomputing.com/products/open-source/torque/>), or
'Docker Swarm' (<https://docs.docker.com/swarm/>).
A multicore and socket mode allow the parallelization on a local machines,
and multiple machines can be hooked up via SSH to create a makeshift
cluster. Moreover, the package provides an abstraction mechanism to define
large-scale computer experiments in a well-organized and reproducible way.
Author: Michel Lang [cre, aut],
Bernd Bischl [aut],
Dirk Surmann [ctb]
Maintainer: Michel Lang <michellang@gmail.com>
Diff between batchtools versions 0.9.4 dated 2017-08-07 and 0.9.5 dated 2017-08-18
DESCRIPTION | 6 - MD5 | 110 ++++++++++++------------ NEWS.md | 17 +++ R/ExperimentRegistry.R | 3 R/Registry.R | 32 ++++-- R/chunkIds.R | 2 R/clusterFunctions.R | 30 ++++-- R/clusterFunctionsDocker.R | 18 +-- R/clusterFunctionsInteractive.R | 2 R/clusterFunctionsLSF.R | 15 +-- R/clusterFunctionsMulticore.R | 2 R/clusterFunctionsOpenLava.R | 15 +-- R/clusterFunctionsSGE.R | 17 +-- R/clusterFunctionsSSH.R | 2 R/clusterFunctionsSlurm.R | 47 +++++----- R/clusterFunctionsSocket.R | 2 R/clusterFunctionsTORQUE.R | 20 ++-- R/doJobCollection.R | 2 R/filenames.R | 2 R/findJobs.R | 9 + R/getStatus.R | 2 R/helpers.R | 6 + R/ids.R | 2 R/killJobs.R | 2 R/loadRegistry.R | 108 ++++++++++++----------- R/mergeRegistries.R | 2 R/reduceResults.R | 20 +++- R/runOSCommand.R | 19 ++-- R/saveRegistry.R | 24 ++--- R/sleep.R | 25 +++-- R/submitJobs.R | 13 +- R/syncRegistry.R | 20 ++-- R/updateRegisty.R | 17 ++- R/waitForJobs.R | 96 ++++++++++---------- README.md | 2 build/vignette.rds |binary inst/doc/batchtools.Rmd | 42 ++++----- inst/doc/batchtools.pdf |binary man/cfKillJob.Rd | 11 +- man/loadRegistry.Rd | 24 +++-- man/makeClusterFunctions.Rd | 10 +- man/makeClusterFunctionsSlurm.Rd | 12 ++ man/reduceResults.Rd | 20 +++- man/runOSCommand.Rd | 2 man/submitJobs.Rd | 9 + man/waitForJobs.Rd | 21 +++- tests/testthat/helper.R | 4 tests/testthat/test_ClusterFunctions.R | 2 tests/testthat/test_ClusterFunctionsMulticore.R | 2 tests/testthat/test_JobCollection.R | 14 +++ tests/testthat/test_Registry.R | 18 +++ tests/testthat/test_mergeRegistries.R | 2 tests/testthat/test_runOSCommand.R | 8 + tests/testthat/test_sweepRegistry.R | 4 tests/testthat/test_waitForJobs.R | 2 vignettes/batchtools.Rmd | 42 ++++----- 56 files changed, 586 insertions(+), 374 deletions(-)
Title: Tools for Blind Source Separation and Supervised Dimension
Reduction for Time Series
Description: Different estimates are provided to solve the blind source separation problem for multivariate time series with stochastic volatility and supervised dimension reduction problem for multivariate time series.
Author: Markus Matilainen, Christophe Croux, Jari Miettinen, Klaus Nordhausen, Hannu Oja, Sara Taskinen
Maintainer: Markus Matilainen <markus.matilainen@utu.fi>
Diff between tsBSS versions 0.3 dated 2017-07-03 and 0.3.1 dated 2017-08-18
DESCRIPTION | 8 ++++---- MD5 | 36 ++++++++++++++++++------------------ R/summary.tssdr.R | 2 +- R/tssdr.R | 22 ++++++++++++++++++---- build/partial.rdb |binary inst/ChangeLog | 12 ++++++++---- man/FixNA.Rd | 22 +++++++++++----------- man/coef.summary.tssdr.Rd | 4 ++-- man/components.summary.tssdr.Rd | 4 ++-- man/gFOBI.Rd | 16 ++++++++-------- man/gJADE.Rd | 16 ++++++++-------- man/plot.summary.tssdr.Rd | 6 +++--- man/plot.tssdr.Rd | 4 ++-- man/print.summary.tssdr.Rd | 6 +++--- man/print.tssdr.Rd | 6 +++--- man/summary.tssdr.Rd | 30 +++++++++++++++--------------- man/tsBSS-package.Rd | 16 +++++++--------- man/tssdr.Rd | 33 +++++++++++++++++---------------- man/vSOBI.Rd | 16 ++++++++-------- 19 files changed, 138 insertions(+), 121 deletions(-)
Title: Isotope Ratio Meta-Analysis
Description: Calculation of consensus values for atomic weights, isotope amount ratios, and isotopic abundances with the associated uncertainties using multivariate meta-regression approach for consensus building.
Author: Juris Meija and Antonio Possolo
Maintainer: Juris Meija <juris.meija@nrc-cnrc.gc.ca>
Diff between CIAAWconsensus versions 1.1 dated 2016-12-31 and 1.2 dated 2017-08-18
DESCRIPTION | 6 +++--- MD5 | 13 +++++++------ NEWS |only R/ciaaw.R | 4 ++-- man/abundances2ratios.Rd | 2 +- man/at.weight.Rd | 2 +- man/mmm.Rd | 2 +- man/normalize.ratios.Rd | 2 +- 8 files changed, 16 insertions(+), 15 deletions(-)
More information about CIAAWconsensus at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-01-27 1.4.5
2014-12-04 1.4.3
2014-08-12 1.3.4
2013-08-12 1.3.2
2013-07-30 1.3.1
2013-04-09 1.2.0
Title: Robust Multiple Imputation with Generalized Additive Models for
Location Scale and Shape
Description: Provides new imputation methods for the 'mice' package based on generalized additive models for location, scale, and shape (GAMLSS) as described in de Jong, van Buuren and Spiess <doi:10.1080/03610918.2014.911894>.
Author: Daniel Salfran [aut, cre],
Martin Spiess [aut, ths]
Maintainer: Daniel Salfran <daniel.salfran@uni-hamburg.de>
Diff between ImputeRobust versions 1.1-2 dated 2017-04-20 and 1.2 dated 2017-08-18
DESCRIPTION | 10 ++-- MD5 | 28 +++++------ NAMESPACE | 3 + NEWS | 6 ++ R/imp_gamlss_fit.R | 105 +++++++++++++++++++++++++------------------- R/imports.R | 2 R/mice_impute_gamlss.R | 69 ++++++++++++++++++++-------- R/model_creator.R | 29 +++++++++--- man/ImpGamlssBootstrap.Rd | 1 man/ImpGamlssFit.Rd | 22 ++++++++- man/ImputeRobust-package.Rd | 9 +-- man/ModelCreator.Rd | 10 +--- man/mice.impute.gamlss.Rd | 51 ++++++++------------- man/sample.data.Rd | 1 man/tao.Rd | 1 15 files changed, 209 insertions(+), 138 deletions(-)
Title: Seasonal/Sequential (Instants/Durations, Even or not) Time
Series
Description: Objects to manipulate sequential and seasonal time series. Sequential time series based on time instants and time durations are handled. Both can be regularly or unevenly spaced (overlapping durations are allowed). Only POSIX* format are used for dates and times. The following classes are provided : 'POSIXcti', 'POSIXctp', 'TimeIntervalDataFrame', 'TimeInstantDataFrame', 'SubtimeDataFrame' ; methods to switch from a class to another and to modify the time support of series (hourly time series to daily time series for instance) are also defined. Tools provided can be used for instance to handle environmental monitoring data (not always produced on a regular time base).
Author: Vladislav Navel
Maintainer: Vladislav Navel <vnavel@yahoo.fr>
Diff between timetools versions 1.11.4 dated 2017-04-10 and 1.12.0 dated 2017-08-18
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/split.R | 2 +- README | 5 +++++ man/timetools-package.Rd | 4 ++-- 5 files changed, 16 insertions(+), 11 deletions(-)
Title: Run 'roxygen2' on (Chunks of) Single Code Files
Description: Have you ever been tempted to create 'roxygen2'-style documentation
comments for one of your functions that was not part of one of your
packages (yet)?
This is exactly what this package is about: running 'roxygen2' on
(chunks of) a single code file.
Author: Andreas Dominik Cullmann [aut, cre]
Maintainer: Andreas Dominik Cullmann <adc-r@arcor.de>
Diff between document versions 2.0.0 dated 2017-08-04 and 2.1.0 dated 2017-08-18
document-2.0.0/document/man/add_dependencies_to_description.Rd |only document-2.0.0/document/man/clean_description.Rd |only document-2.1.0/document/DESCRIPTION | 8 - document-2.1.0/document/MD5 | 26 +-- document-2.1.0/document/NAMESPACE | 2 document-2.1.0/document/NEWS.md | 21 +- document-2.1.0/document/R/man.R | 34 +--- document-2.1.0/document/R/package_functions.R | 5 document-2.1.0/document/R/utils.R | 76 +++++----- document-2.1.0/document/inst/doc/Introduction_to_document.R | 15 + document-2.1.0/document/inst/doc/Introduction_to_document.Rmd | 21 +- document-2.1.0/document/inst/doc/Introduction_to_document.html | 6 document-2.1.0/document/man/alter_description_file.Rd |only document-2.1.0/document/man/clean_description_file.Rd |only document-2.1.0/document/man/man.Rd | 6 document-2.1.0/document/vignettes/Introduction_to_document.Rmd | 21 +- 16 files changed, 131 insertions(+), 110 deletions(-)
Title: Automated Data Preparation
Description: Do most of the painful data preparation for a data science project with a minimum amount of code; Take advantages of data.table efficiency and use some algorithmic trick in order to perform data preparation in a time and RAM efficient way.
Author: Emmanuel-Lin Toulemonde [aut, cre]
Maintainer: Emmanuel-Lin Toulemonde <el.toulemonde@protonmail.com>
Diff between dataPreparation versions 0.1 dated 2017-07-08 and 0.2 dated 2017-08-18
dataPreparation-0.1/dataPreparation/README.md |only dataPreparation-0.1/dataPreparation/man/diffDates.Rd |only dataPreparation-0.1/dataPreparation/man/setColAsFactorOrLogical.Rd |only dataPreparation-0.2/dataPreparation/DESCRIPTION | 9 dataPreparation-0.2/dataPreparation/MD5 | 116 dataPreparation-0.2/dataPreparation/NAMESPACE | 11 dataPreparation-0.2/dataPreparation/NEWS.md | 26 dataPreparation-0.2/dataPreparation/R/aggregate.R | 85 dataPreparation-0.2/dataPreparation/R/dataSet.R | 4 dataPreparation-0.2/dataPreparation/R/datesManipulations.R | 225 - dataPreparation-0.2/dataPreparation/R/description.R |only dataPreparation-0.2/dataPreparation/R/factorManipulation.R |only dataPreparation-0.2/dataPreparation/R/fastFunctions.r | 124 dataPreparation-0.2/dataPreparation/R/generateFromCharacter.R |only dataPreparation-0.2/dataPreparation/R/generateFromDate.R |only dataPreparation-0.2/dataPreparation/R/generateFromFactor.R |only dataPreparation-0.2/dataPreparation/R/genericFunctions.R | 138 dataPreparation-0.2/dataPreparation/R/numericsManipulations.R | 63 dataPreparation-0.2/dataPreparation/R/prepareSet.R | 89 dataPreparation-0.2/dataPreparation/R/sameShape.R |only dataPreparation-0.2/dataPreparation/R/setColAs.R | 167 - dataPreparation-0.2/dataPreparation/R/shapeSet.R | 81 dataPreparation-0.2/dataPreparation/R/whichFunctions.R | 291 +- dataPreparation-0.2/dataPreparation/data/messy_adult.rda |binary dataPreparation-0.2/dataPreparation/inst/doc/dataPreparation.R | 128 dataPreparation-0.2/dataPreparation/inst/doc/dataPreparation.Rmd | 205 + dataPreparation-0.2/dataPreparation/inst/doc/dataPreparation.html | 1404 +++++----- dataPreparation-0.2/dataPreparation/man/aggregateByKey.Rd | 10 dataPreparation-0.2/dataPreparation/man/dateFormatUnifier.Rd | 2 dataPreparation-0.2/dataPreparation/man/description.Rd |only dataPreparation-0.2/dataPreparation/man/fastFilterVariables.Rd | 12 dataPreparation-0.2/dataPreparation/man/fastHandleNa.Rd | 4 dataPreparation-0.2/dataPreparation/man/fastIsEqual.Rd | 2 dataPreparation-0.2/dataPreparation/man/fastRound.Rd | 6 dataPreparation-0.2/dataPreparation/man/findAndTransformDates.Rd | 10 dataPreparation-0.2/dataPreparation/man/findAndTransformNumerics.Rd | 4 dataPreparation-0.2/dataPreparation/man/generateDateDiffs.Rd |only dataPreparation-0.2/dataPreparation/man/generateFactorFromDate.Rd |only dataPreparation-0.2/dataPreparation/man/generateFromCharacter.Rd |only dataPreparation-0.2/dataPreparation/man/generateFromFactor.Rd |only dataPreparation-0.2/dataPreparation/man/messy_adult.Rd | 4 dataPreparation-0.2/dataPreparation/man/prepareSet.Rd | 26 dataPreparation-0.2/dataPreparation/man/sameShape.Rd |only dataPreparation-0.2/dataPreparation/man/setAsNumericMatrix.Rd | 10 dataPreparation-0.2/dataPreparation/man/setColAsCharacter.Rd | 2 dataPreparation-0.2/dataPreparation/man/setColAsDate.Rd | 12 dataPreparation-0.2/dataPreparation/man/setColAsFactor.Rd |only dataPreparation-0.2/dataPreparation/man/setColAsNumeric.Rd | 4 dataPreparation-0.2/dataPreparation/man/shapeSet.Rd | 10 dataPreparation-0.2/dataPreparation/man/unFactor.Rd |only dataPreparation-0.2/dataPreparation/man/whichAreBijection.Rd | 11 dataPreparation-0.2/dataPreparation/man/whichAreConstant.Rd | 10 dataPreparation-0.2/dataPreparation/man/whichAreInDouble.Rd | 6 dataPreparation-0.2/dataPreparation/man/whichAreIncluded.Rd | 17 dataPreparation-0.2/dataPreparation/tests/testthat.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_aggregate.R | 59 dataPreparation-0.2/dataPreparation/tests/testthat/test_datesManipulation.R | 65 dataPreparation-0.2/dataPreparation/tests/testthat/test_description.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_factorManipulation.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_fastFunctions.R | 35 dataPreparation-0.2/dataPreparation/tests/testthat/test_generateFromCharacter.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_generateFromDate.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_generateFromFactor.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_genericFunctions.R | 118 dataPreparation-0.2/dataPreparation/tests/testthat/test_numericsManipulations.R | 34 dataPreparation-0.2/dataPreparation/tests/testthat/test_prepareSet.R | 10 dataPreparation-0.2/dataPreparation/tests/testthat/test_sameShape.R |only dataPreparation-0.2/dataPreparation/tests/testthat/test_setColAs.R | 110 dataPreparation-0.2/dataPreparation/tests/testthat/test_shapeSet.R | 33 dataPreparation-0.2/dataPreparation/tests/testthat/test_whichFunctions.R | 57 dataPreparation-0.2/dataPreparation/vignettes/dataPreparation.Rmd | 205 + 71 files changed, 2437 insertions(+), 1617 deletions(-)
More information about dataPreparation at CRAN
Permanent link
Title: Minimum-Hypergeometric Test
Description: Runs a minimum-hypergeometric (mHG) test as described in: Eden, E. (2007). Discovering Motifs in Ranked Lists of DNA Sequences. Haifa.
Author: Kobi Perl
Maintainer: Kobi Perl <kobipe3@gmail.com>
Diff between mHG versions 1.0 dated 2015-07-26 and 1.1 dated 2017-08-18
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/mHG.R | 2 +- inst/CITATION | 2 +- man/mHG-package.Rd | 8 ++++---- 5 files changed, 14 insertions(+), 14 deletions(-)